BLASTX nr result

ID: Cinnamomum25_contig00029510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00029510
         (287 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010539768.1| PREDICTED: RNA-binding protein 24-A-like iso...   115   9e-24
ref|XP_010539767.1| PREDICTED: RNA-binding protein 24-A-like iso...   115   9e-24
ref|XP_010539766.1| PREDICTED: RNA-binding protein 38-like isofo...   115   9e-24
ref|XP_010539765.1| PREDICTED: RNA-binding protein 38-like isofo...   115   9e-24
ref|XP_010927301.1| PREDICTED: RNA-binding protein 38-like [Elae...   115   1e-23
ref|XP_010664012.1| PREDICTED: RNA-binding protein 24-A isoform ...   115   1e-23
ref|XP_012073568.1| PREDICTED: RNA-binding protein 24-A [Jatroph...   115   1e-23
ref|XP_010664015.1| PREDICTED: deleted in azoospermia-like isofo...   115   1e-23
ref|XP_007018664.1| RNA-binding (RRM/RBD/RNP motifs) family prot...   115   1e-23
ref|XP_007018663.1| RNA-binding family protein isoform 1 [Theobr...   115   1e-23
ref|XP_010913866.1| PREDICTED: RNA-binding protein 38-like [Elae...   114   3e-23
ref|XP_010270570.1| PREDICTED: RNA-binding protein 24-A [Nelumbo...   114   3e-23
ref|XP_010266283.1| PREDICTED: RNA-binding protein 38-like [Nelu...   114   3e-23
gb|KGN47777.1| hypothetical protein Csa_6G401470 [Cucumis sativus]    114   3e-23
ref|XP_008464801.1| PREDICTED: RNA-binding protein 24-A [Cucumis...   114   3e-23
gb|KDO85241.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   114   3e-23
gb|KDO85240.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   114   3e-23
gb|KDO85238.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   114   3e-23
gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-184...   114   3e-23
ref|NP_565132.2| RNA recognition motif-containing protein [Arabi...   114   3e-23

>ref|XP_010539768.1| PREDICTED: RNA-binding protein 24-A-like isoform X4 [Tarenaya
           hassleriana]
          Length = 278

 Score =  115 bits (289), Expect = 9e-24
 Identities = 57/79 (72%), Positives = 63/79 (79%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXSPFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAV 59
           MA++P+P               PFGDTT+TK+FVGGLAWETQSETLR HFEQ+GEILEAV
Sbjct: 1   MAYQPVPSSGFHYLNS------PFGDTTFTKVFVGGLAWETQSETLRRHFEQYGEILEAV 54

Query: 58  VITDKNTGRSKGYGFVTFR 2
           VITDKNTGRSKGYGFVTFR
Sbjct: 55  VITDKNTGRSKGYGFVTFR 73


>ref|XP_010539767.1| PREDICTED: RNA-binding protein 24-A-like isoform X3 [Tarenaya
           hassleriana]
          Length = 280

 Score =  115 bits (289), Expect = 9e-24
 Identities = 57/79 (72%), Positives = 63/79 (79%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXSPFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAV 59
           MA++P+P               PFGDTT+TK+FVGGLAWETQSETLR HFEQ+GEILEAV
Sbjct: 1   MAYQPVPSSGFHYLNS------PFGDTTFTKVFVGGLAWETQSETLRRHFEQYGEILEAV 54

Query: 58  VITDKNTGRSKGYGFVTFR 2
           VITDKNTGRSKGYGFVTFR
Sbjct: 55  VITDKNTGRSKGYGFVTFR 73


>ref|XP_010539766.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Tarenaya
           hassleriana]
          Length = 298

 Score =  115 bits (289), Expect = 9e-24
 Identities = 57/79 (72%), Positives = 63/79 (79%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXSPFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAV 59
           MA++P+P               PFGDTT+TK+FVGGLAWETQSETLR HFEQ+GEILEAV
Sbjct: 1   MAYQPVPSSGFHYLNS------PFGDTTFTKVFVGGLAWETQSETLRRHFEQYGEILEAV 54

Query: 58  VITDKNTGRSKGYGFVTFR 2
           VITDKNTGRSKGYGFVTFR
Sbjct: 55  VITDKNTGRSKGYGFVTFR 73


>ref|XP_010539765.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Tarenaya
           hassleriana]
          Length = 300

 Score =  115 bits (289), Expect = 9e-24
 Identities = 57/79 (72%), Positives = 63/79 (79%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXSPFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAV 59
           MA++P+P               PFGDTT+TK+FVGGLAWETQSETLR HFEQ+GEILEAV
Sbjct: 1   MAYQPVPSSGFHYLNS------PFGDTTFTKVFVGGLAWETQSETLRRHFEQYGEILEAV 54

Query: 58  VITDKNTGRSKGYGFVTFR 2
           VITDKNTGRSKGYGFVTFR
Sbjct: 55  VITDKNTGRSKGYGFVTFR 73


>ref|XP_010927301.1| PREDICTED: RNA-binding protein 38-like [Elaeis guineensis]
          Length = 288

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/57 (94%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTTYTK+FVGGLAWET+SETLR HFEQFGEILEAVVITDKNTGRSKGYGFVTFR
Sbjct: 28  PFGDTTYTKVFVGGLAWETKSETLRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 84


>ref|XP_010664012.1| PREDICTED: RNA-binding protein 24-A isoform X1 [Vitis vinifera]
           gi|731427534|ref|XP_010664014.1| PREDICTED: RNA-binding
           protein 24-A isoform X1 [Vitis vinifera]
          Length = 285

 Score =  115 bits (287), Expect = 1e-23
 Identities = 58/81 (71%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXS--PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIP                 PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_012073568.1| PREDICTED: RNA-binding protein 24-A [Jatropha curcas]
           gi|643728805|gb|KDP36742.1| hypothetical protein
           JCGZ_08033 [Jatropha curcas]
          Length = 285

 Score =  115 bits (287), Expect = 1e-23
 Identities = 58/81 (71%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXS--PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIP                 PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_010664015.1| PREDICTED: deleted in azoospermia-like isoform X2 [Vitis vinifera]
           gi|297745603|emb|CBI40768.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  115 bits (287), Expect = 1e-23
 Identities = 58/81 (71%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXS--PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIP                 PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_007018664.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
           [Theobroma cacao] gi|508723992|gb|EOY15889.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           2 [Theobroma cacao]
          Length = 284

 Score =  115 bits (287), Expect = 1e-23
 Identities = 58/81 (71%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXS--PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIP                 PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQYINSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_007018663.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508723991|gb|EOY15888.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 319

 Score =  115 bits (287), Expect = 1e-23
 Identities = 58/81 (71%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXS--PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIP                 PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQYINSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_010913866.1| PREDICTED: RNA-binding protein 38-like [Elaeis guineensis]
           gi|743767221|ref|XP_010913867.1| PREDICTED: RNA-binding
           protein 38-like [Elaeis guineensis]
          Length = 284

 Score =  114 bits (284), Expect = 3e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTT+TK+FVGGLAWETQSETLR HFEQFGEILEAVVI+DKNTGRSKGYGFVTFR
Sbjct: 25  PFGDTTFTKVFVGGLAWETQSETLRRHFEQFGEILEAVVISDKNTGRSKGYGFVTFR 81


>ref|XP_010270570.1| PREDICTED: RNA-binding protein 24-A [Nelumbo nucifera]
          Length = 286

 Score =  114 bits (284), Expect = 3e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILEAVVITDKNTGRSKGYGFVTFR
Sbjct: 27  PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 83


>ref|XP_010266283.1| PREDICTED: RNA-binding protein 38-like [Nelumbo nucifera]
          Length = 287

 Score =  114 bits (284), Expect = 3e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILEAVVITDKNTGRSKGYGFVTFR
Sbjct: 27  PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 83


>gb|KGN47777.1| hypothetical protein Csa_6G401470 [Cucumis sativus]
          Length = 323

 Score =  114 bits (284), Expect = 3e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILEAVVITDKNTGRSKGYGFVTFR
Sbjct: 25  PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 81


>ref|XP_008464801.1| PREDICTED: RNA-binding protein 24-A [Cucumis melo]
          Length = 286

 Score =  114 bits (284), Expect = 3e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILEAVVITDKNTGRSKGYGFVTFR
Sbjct: 25  PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 81


>gb|KDO85241.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
           gi|641866557|gb|KDO85242.1| hypothetical protein
           CISIN_1g023475mg [Citrus sinensis]
           gi|641866558|gb|KDO85243.1| hypothetical protein
           CISIN_1g023475mg [Citrus sinensis]
          Length = 264

 Score =  114 bits (284), Expect = 3e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILEAVVITDKNTGRSKGYGFVTFR
Sbjct: 25  PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 81


>gb|KDO85240.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
          Length = 258

 Score =  114 bits (284), Expect = 3e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILEAVVITDKNTGRSKGYGFVTFR
Sbjct: 25  PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 81


>gb|KDO85238.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
          Length = 261

 Score =  114 bits (284), Expect = 3e-23
 Identities = 53/57 (92%), Positives = 56/57 (98%)
 Frame = -2

Query: 172 PFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAVVITDKNTGRSKGYGFVTFR 2
           PFGDTTYTK+FVGGLAWETQSET+R +FEQFGEILEAVVITDKNTGRSKGYGFVTFR
Sbjct: 25  PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 81


>gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-18423 [Arabidopsis thaliana]
           gi|12323977|gb|AAG51948.1|AC015450_9 putative
           RNA-binding protein; 24808-23340 [Arabidopsis thaliana]
          Length = 279

 Score =  114 bits (284), Expect = 3e-23
 Identities = 56/79 (70%), Positives = 62/79 (78%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXSPFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAV 59
           MA++P+P               PFGDTT+TK+FVGGLAWETQSETLR HFEQ+GEILEAV
Sbjct: 1   MAYQPVPGSGFHYLNS------PFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAV 54

Query: 58  VITDKNTGRSKGYGFVTFR 2
           VI DKNTGRSKGYGFVTFR
Sbjct: 55  VIADKNTGRSKGYGFVTFR 73


>ref|NP_565132.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|332197724|gb|AEE35845.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 285

 Score =  114 bits (284), Expect = 3e-23
 Identities = 56/79 (70%), Positives = 62/79 (78%)
 Frame = -2

Query: 238 MAFRPIPXXXXXXXXXXXXXXSPFGDTTYTKLFVGGLAWETQSETLRLHFEQFGEILEAV 59
           MA++P+P               PFGDTT+TK+FVGGLAWETQSETLR HFEQ+GEILEAV
Sbjct: 1   MAYQPVPGSGFHYLNS------PFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAV 54

Query: 58  VITDKNTGRSKGYGFVTFR 2
           VI DKNTGRSKGYGFVTFR
Sbjct: 55  VIADKNTGRSKGYGFVTFR 73


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