BLASTX nr result
ID: Cinnamomum25_contig00029454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00029454
(268 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009145037.1| ycf1 (chloroplast) [Dieffenbachia seguine] g... 127 4e-27
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]... 127 4e-27
gb|AEK48551.1| ycf1 (chloroplast) [Colocasia esculenta] 124 2e-26
ref|NP_904157.1| hypothetical protein AmtrCp086 [Amborella trich... 123 6e-26
ref|YP_005097932.1| ycf1 (chloroplast) [Colocasia esculenta] gi|... 122 7e-26
ref|YP_001595554.1| Ycf1 [Lemna minor] gi|161784251|ref|YP_00159... 122 9e-26
ref|YP_004769992.1| hypothetical chloroplast RF19 (chloroplast) ... 122 1e-25
gb|ACU18876.1| unknown [Glycine max] 111 2e-22
gb|KHN05952.1| Putative membrane protein ycf1 [Glycine soja] 108 1e-21
ref|XP_006364256.1| PREDICTED: putative membrane protein ycf1-li... 102 8e-20
ref|YP_009141921.1| hypothetical chloroplast RF1 (chloroplast) [... 102 1e-19
ref|YP_009130174.1| hypothetical chloroplast RF19 (chloroplast) ... 102 1e-19
ref|YP_009116400.1| hypothetical chloroplast RF1 (chloroplast) [... 102 1e-19
gb|AIY33881.1| photosystem I assembly protein Ycf1 (chloroplast)... 102 1e-19
ref|YP_009093857.1| hypothetical chloroplast RF1 (chloroplast) [... 102 1e-19
ref|YP_009048632.1| hypothetical chloroplast RF1 [Paris verticil... 102 1e-19
ref|YP_009048348.1| hypothetical chloroplast RF1 (chloroplast) [... 102 1e-19
ref|YP_009045623.1| Ycf1 (chloroplast) [Cypripedium macranthos] ... 102 1e-19
gb|ADD30909.1| putative RF1 protein (chloroplast) [Nelumbo nucif... 102 1e-19
ref|YP_003434033.1| hypothetical chloroplast RF19 [Typha latifol... 102 1e-19
>ref|YP_009145037.1| ycf1 (chloroplast) [Dieffenbachia seguine]
gi|827504838|gb|AKJ83424.1| ycf1 (chloroplast)
[Dieffenbachia seguine]
Length = 1928
Score = 127 bits (318), Expect = 4e-27
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKKKGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYGFLTTFSIG 87
KVKKSSY+NREIAI+KK+ RFVMI LCMKI+NSVV+VGLYYGF+TTFSIG
Sbjct: 2 KVKKSSYNNREIAIQKKRRRFVMIFKFFLLGNPLSLCMKIMNSVVIVGLYYGFMTTFSIG 61
Query: 86 PSYLFLLRARIMEEGTEKEVLATTGFI 6
PSYLFLLRA +MEEGTEK++ ATTGFI
Sbjct: 62 PSYLFLLRAWVMEEGTEKQISATTGFI 88
>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
[Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
protein (chloroplast) [Tectona grandis]
gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
[Tectona grandis]
Length = 1898
Score = 127 bits (318), Expect = 4e-27
Identities = 69/91 (75%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKKK---GRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYGFLTTF 96
KV+KSSY+N EIAIEKKK GRFVMI LCMKIINSVV VGLYYGFLTTF
Sbjct: 16 KVQKSSYNNPEIAIEKKKEKKGRFVMIFQSFLLGNLVSLCMKIINSVVAVGLYYGFLTTF 75
Query: 95 SIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
SIGPSYLFLLRA++MEEGTEK+V ATTGFIT
Sbjct: 76 SIGPSYLFLLRAQVMEEGTEKKVSATTGFIT 106
>gb|AEK48551.1| ycf1 (chloroplast) [Colocasia esculenta]
Length = 1927
Score = 124 bits (312), Expect = 2e-26
Identities = 64/87 (73%), Positives = 71/87 (81%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKKKGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYGFLTTFSIG 87
KVKKSSY+NREIA +KK+ RFVMI LCMKIINSVV+VGLYYGF+TTFSIG
Sbjct: 2 KVKKSSYNNREIARQKKRRRFVMILKFFLLGNPLSLCMKIINSVVIVGLYYGFITTFSIG 61
Query: 86 PSYLFLLRARIMEEGTEKEVLATTGFI 6
PSYLFLLRA +MEEGTEK + ATTGFI
Sbjct: 62 PSYLFLLRAWVMEEGTEKRISATTGFI 88
>ref|NP_904157.1| hypothetical protein AmtrCp086 [Amborella trichopoda]
gi|34481687|emb|CAD45164.1| ycf1 [Amborella trichopoda]
Length = 1829
Score = 123 bits (308), Expect = 6e-26
Identities = 65/87 (74%), Positives = 70/87 (80%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKKKGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYGFLTTFSIG 87
KVKKSSY+NRE A EKK+ F+MI LCMKI NSVVVVGLYYGF+TTFSIG
Sbjct: 14 KVKKSSYNNRESATEKKERGFLMILKSFLLGNLLSLCMKIRNSVVVVGLYYGFITTFSIG 73
Query: 86 PSYLFLLRARIMEEGTEKEVLATTGFI 6
PSYLFLLRAR+MEEGTEKEV ATTGFI
Sbjct: 74 PSYLFLLRARVMEEGTEKEVSATTGFI 100
>ref|YP_005097932.1| ycf1 (chloroplast) [Colocasia esculenta]
gi|340536698|gb|AEK48465.1| ycf1 (chloroplast)
[Colocasia esculenta]
Length = 1927
Score = 122 bits (307), Expect = 7e-26
Identities = 63/87 (72%), Positives = 70/87 (80%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKKKGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYGFLTTFSIG 87
KV KSSY+NREIA +KK+ RFVMI LCMKIINSVV+VGLYYGF+TTFSIG
Sbjct: 2 KVSKSSYNNREIARQKKRRRFVMILKFFLLGNPLSLCMKIINSVVIVGLYYGFITTFSIG 61
Query: 86 PSYLFLLRARIMEEGTEKEVLATTGFI 6
PSYLFLLRA +MEEGTEK + ATTGFI
Sbjct: 62 PSYLFLLRAWVMEEGTEKRISATTGFI 88
>ref|YP_001595554.1| Ycf1 [Lemna minor] gi|161784251|ref|YP_001595567.1| Ycf1 [Lemna
minor] gi|182702254|sp|A9L9E2.1|TI214_LEMMI RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 (chloroplast) [Lemna minor]
gi|88696816|gb|ABD48541.1| Ycf1 [Lemna minor]
gi|88696829|gb|ABD48554.1| Ycf1 [Lemna minor]
Length = 1911
Score = 122 bits (306), Expect = 9e-26
Identities = 62/87 (71%), Positives = 71/87 (81%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKKKGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYGFLTTFSIG 87
+VKKSSY+NRE+A +KK RFVMI LCMKIINSVV+VGLYYGF+TTFSIG
Sbjct: 2 EVKKSSYNNREVATQKKGRRFVMILKFFLLGNPLSLCMKIINSVVIVGLYYGFMTTFSIG 61
Query: 86 PSYLFLLRARIMEEGTEKEVLATTGFI 6
PSYLFLLRA +MEEGTEK++ ATTGFI
Sbjct: 62 PSYLFLLRAWLMEEGTEKQISATTGFI 88
>ref|YP_004769992.1| hypothetical chloroplast RF19 (chloroplast) [Wolffia australiana]
gi|342316432|ref|YP_004770005.1| hypothetical
chloroplast RF19 (chloroplast) [Wolffia australiana]
gi|341834284|gb|AEK94553.1| hypothetical chloroplast
RF19 [Wolffia australiana] gi|341834297|gb|AEK94566.1|
hypothetical chloroplast RF19 [Wolffia australiana]
Length = 1908
Score = 122 bits (305), Expect = 1e-25
Identities = 61/87 (70%), Positives = 71/87 (81%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKKKGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYGFLTTFSIG 87
+VKKSSY+NRE+A +KK RFVMI LCMKI+NSVV+VGLYYGF+TTFSIG
Sbjct: 2 EVKKSSYNNREVATQKKGRRFVMILKFFLLGNPLSLCMKILNSVVIVGLYYGFMTTFSIG 61
Query: 86 PSYLFLLRARIMEEGTEKEVLATTGFI 6
PSYLFLLRA +MEEGTEK++ ATTGFI
Sbjct: 62 PSYLFLLRAWVMEEGTEKQISATTGFI 88
>gb|ACU18876.1| unknown [Glycine max]
Length = 299
Score = 111 bits (278), Expect = 2e-22
Identities = 62/96 (64%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKK--------KGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYG 111
KV+KS Y+N +IAIEK+ K RF MI LCMKIINS+VVVGLYY
Sbjct: 8 KVEKSLYNNPKIAIEKESRNCNRKEKERFEMIFQSFILDNLVSLCMKIINSIVVVGLYYE 67
Query: 110 FLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
FLTTFSIGPSYLFLLRAR++EEGTEK++ ATTGFIT
Sbjct: 68 FLTTFSIGPSYLFLLRARLVEEGTEKKISATTGFIT 103
>gb|KHN05952.1| Putative membrane protein ycf1 [Glycine soja]
Length = 122
Score = 108 bits (271), Expect = 1e-21
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 8/93 (8%)
Frame = -3
Query: 266 KVKKSSYSNREIAIEKK--------KGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYG 111
KV+KS Y+N +IAIEK+ K RF MI LCMKIINS+VVVGLYYG
Sbjct: 8 KVEKSLYNNPKIAIEKESRNCNRKEKERFEMIFQSFILDNLVFLCMKIINSIVVVGLYYG 67
Query: 110 FLTTFSIGPSYLFLLRARIMEEGTEKEVLATTG 12
FLTTFSIGPSYLFLLRAR++EEGTEK++ ATTG
Sbjct: 68 FLTTFSIGPSYLFLLRARLVEEGTEKKISATTG 100
>ref|XP_006364256.1| PREDICTED: putative membrane protein ycf1-like [Solanum tuberosum]
Length = 452
Score = 102 bits (255), Expect = 8e-20
Identities = 57/87 (65%), Positives = 63/87 (72%)
Frame = -3
Query: 263 VKKSSYSNREIAIEKKKGRFVMIXXXXXXXXXXXLCMKIINSVVVVGLYYGFLTTFSIGP 84
V S ++ E I + RFV+I LCMKIINSVVVVGLYYGFLTTFSIGP
Sbjct: 87 VDTSIAADAEEEILALRARFVIIFQSFLLGNLGSLCMKIINSVVVVGLYYGFLTTFSIGP 146
Query: 83 SYLFLLRARIMEEGTEKEVLATTGFIT 3
SYLFLLRA +MEEGTEK+V ATTGFIT
Sbjct: 147 SYLFLLRALVMEEGTEKKVSATTGFIT 173
>ref|YP_009141921.1| hypothetical chloroplast RF1 (chloroplast) [Xerophyllum tenax]
gi|705244280|gb|AIW56475.1| hypothetical chloroplast RF1
(chloroplast) [Xerophyllum tenax]
Length = 1837
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66
>ref|YP_009130174.1| hypothetical chloroplast RF19 (chloroplast) [Carludovica palmata]
gi|768803843|gb|AJV88643.1| hypothetical chloroplast
RF19 (chloroplast) [Carludovica palmata]
Length = 1875
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66
>ref|YP_009116400.1| hypothetical chloroplast RF1 (chloroplast) [Ananas comosus]
gi|746001429|dbj|BAQ19700.1| hypothetical chloroplast
RF1 (chloroplast) [Ananas comosus]
Length = 1866
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66
>gb|AIY33881.1| photosystem I assembly protein Ycf1 (chloroplast) [Nelumbo
nucifera]
Length = 1839
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66
>ref|YP_009093857.1| hypothetical chloroplast RF1 (chloroplast) [Luzuriaga radicans]
gi|695277468|gb|AIT16045.1| hypothetical chloroplast RF1
(chloroplast) [Luzuriaga radicans]
Length = 1849
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66
>ref|YP_009048632.1| hypothetical chloroplast RF1 [Paris verticillata]
gi|618625642|gb|AHX80508.1| hypothetical chloroplast RF1
[Paris verticillata]
Length = 1858
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66
>ref|YP_009048348.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia yunnanensis]
gi|573015504|gb|AHF72082.1| hypothetical chloroplast RF1
(chloroplast) [Magnolia yunnanensis]
Length = 1844
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66
>ref|YP_009045623.1| Ycf1 (chloroplast) [Cypripedium macranthos]
gi|578888923|gb|AHI16806.1| Ycf1 (chloroplast)
[Cypripedium macranthos]
Length = 1790
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 16 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 67
>gb|ADD30909.1| putative RF1 protein (chloroplast) [Nelumbo nucifera]
Length = 1839
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66
>ref|YP_003434033.1| hypothetical chloroplast RF19 [Typha latifolia]
gi|281371830|gb|ADA63757.1| hypothetical chloroplast
RF19 [Typha latifolia]
Length = 1835
Score = 102 bits (254), Expect = 1e-19
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = -3
Query: 158 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARIMEEGTEKEVLATTGFIT 3
CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAR+MEEGTEKEV ATTGFIT
Sbjct: 15 CMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFIT 66