BLASTX nr result

ID: Cinnamomum25_contig00029400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00029400
         (326 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009411139.1| PREDICTED: SWI/SNF complex subunit SWI3D [Mu...   112   1e-22
ref|XP_008790351.1| PREDICTED: SWI/SNF complex subunit SWI3D [Ph...   108   1e-21
ref|XP_010936291.1| PREDICTED: SWI/SNF complex subunit SWI3D [El...   104   3e-20
ref|XP_009394308.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   100   4e-19
gb|KHN39775.1| SWI/SNF complex subunit SWI3D, partial [Glycine s...   100   7e-19
ref|XP_003539020.2| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   100   7e-19
ref|XP_011048690.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    99   1e-18
ref|XP_010254885.1| PREDICTED: SWI/SNF complex subunit SWI3D iso...    99   1e-18
ref|XP_010254884.1| PREDICTED: SWI/SNF complex subunit SWI3D iso...    99   1e-18
ref|XP_002313800.1| DNA-binding family protein [Populus trichoca...    99   1e-18
gb|KHN25365.1| SWI/SNF complex subunit SWI3D [Glycine soja]            98   2e-18
ref|XP_003540680.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    98   2e-18
ref|XP_010096186.1| SWI/SNF complex subunit SWI3D [Morus notabil...    98   2e-18
ref|XP_011037606.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    98   2e-18
ref|XP_011037543.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    98   2e-18
ref|XP_011037542.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    98   2e-18
ref|XP_002305423.1| DNA-binding family protein [Populus trichoca...    97   3e-18
ref|XP_010230705.1| PREDICTED: SWI/SNF complex subunit SWI3D iso...    97   4e-18
ref|XP_010230701.1| PREDICTED: SWI/SNF complex subunit SWI3D iso...    97   4e-18
gb|EEE59828.1| hypothetical protein OsJ_12391 [Oryza sativa Japo...    97   4e-18

>ref|XP_009411139.1| PREDICTED: SWI/SNF complex subunit SWI3D [Musa acuminata subsp.
           malaccensis] gi|695046607|ref|XP_009411140.1| PREDICTED:
           SWI/SNF complex subunit SWI3D [Musa acuminata subsp.
           malaccensis]
          Length = 944

 Score =  112 bits (279), Expect = 1e-22
 Identities = 60/95 (63%), Positives = 67/95 (70%)
 Frame = +2

Query: 26  KDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGLVEP 205
           K+    N+   T    AI AL AAFQAVGY P +G   SF EAGN VMALA+FLSGLVE 
Sbjct: 498 KNTADVNICHETGASFAIDALKAAFQAVGYFPEQGGLGSFAEAGNPVMALAVFLSGLVES 557

Query: 206 DAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           DA     +SSLKAMSE SP+IQLA+RHC LLEDPP
Sbjct: 558 DAVITSCRSSLKAMSEDSPSIQLATRHCFLLEDPP 592


>ref|XP_008790351.1| PREDICTED: SWI/SNF complex subunit SWI3D [Phoenix dactylifera]
           gi|672133461|ref|XP_008790353.1| PREDICTED: SWI/SNF
           complex subunit SWI3D [Phoenix dactylifera]
          Length = 981

 Score =  108 bits (271), Expect = 1e-21
 Identities = 57/101 (56%), Positives = 67/101 (66%)
 Frame = +2

Query: 8   SGTSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFL 187
           +  +E+K  V   +S  T   +A+ AL  AF AVGY P +G   SF EAGN VMALA FL
Sbjct: 518 TNATEKKSTVDVEISYETGVSIALDALKTAFHAVGYFPEEGGLGSFAEAGNPVMALAAFL 577

Query: 188 SGLVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
            GLVE D A    +SSLKAMSE SP IQLA+RHC +LEDPP
Sbjct: 578 VGLVEHDVATTSCRSSLKAMSEESPGIQLATRHCFILEDPP 618


>ref|XP_010936291.1| PREDICTED: SWI/SNF complex subunit SWI3D [Elaeis guineensis]
          Length = 989

 Score =  104 bits (259), Expect = 3e-20
 Identities = 59/104 (56%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = +2

Query: 17  SERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGL 196
           +E K  V   +S  T   +AI AL  AF AVGY P      SF EAGN VMALA FL GL
Sbjct: 522 TEDKSTVDVEISHETDVSIAIDALKTAFHAVGYFPEGEGLGSFAEAGNPVMALAAFLVGL 581

Query: 197 VEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPPT-ANDP 325
           VE D A    +SSLKAMSE SP IQLA+RHC +LEDPP    DP
Sbjct: 582 VERDVATTSCRSSLKAMSEESPGIQLATRHCFILEDPPNDVKDP 625


>ref|XP_009394308.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Musa acuminata
           subsp. malaccensis]
          Length = 948

 Score =  100 bits (249), Expect = 4e-19
 Identities = 58/101 (57%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = +2

Query: 26  KDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGLVEP 205
           K     ++ Q      AI AL AAFQAVGY P +G   SF EAGN VMALA FLSG+VE 
Sbjct: 497 KSTDDKHIFQENGASFAIDALKAAFQAVGYFPEQGLG-SFAEAGNPVMALAAFLSGVVES 555

Query: 206 DAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPPT-ANDP 325
           D+     +SSLKA+SE SP IQLA+RHC +LEDPPT + DP
Sbjct: 556 DSLITSCRSSLKAISEDSPGIQLATRHCFVLEDPPTDSKDP 596


>gb|KHN39775.1| SWI/SNF complex subunit SWI3D, partial [Glycine soja]
          Length = 933

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 53/100 (53%), Positives = 64/100 (64%)
 Frame = +2

Query: 11  GTSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLS 190
           GTS+ +DAV   + Q   +D AI+AL  AF AVGY P    P SF E GN VMALA FL+
Sbjct: 404 GTSKSEDAVKVKIDQEAGNDCAINALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLA 463

Query: 191 GLVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
            LV  D A A   SS+K+MS  SP  +LA+R C LL+DPP
Sbjct: 464 HLVGSDVAVASAHSSIKSMSRNSPGTELAARCCFLLKDPP 503


>ref|XP_003539020.2| PREDICTED: SWI/SNF complex subunit SWI3D-like isoform X1 [Glycine
           max]
          Length = 1047

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 53/100 (53%), Positives = 64/100 (64%)
 Frame = +2

Query: 11  GTSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLS 190
           GTS+ +DAV   + Q   +D AI+AL  AF AVGY P    P SF E GN VMALA FL+
Sbjct: 518 GTSKSEDAVKVKIDQEAGNDCAINALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLA 577

Query: 191 GLVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
            LV  D A A   SS+K+MS  SP  +LA+R C LL+DPP
Sbjct: 578 HLVGSDVAVASAHSSIKSMSRNSPGTELAARCCFLLKDPP 617


>ref|XP_011048690.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Populus euphratica]
          Length = 1010

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 51/98 (52%), Positives = 66/98 (67%)
 Frame = +2

Query: 17  SERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGL 196
           S+ +DA    VS+   ++VA+ AL  AF+AVGY P+     SF E GN VMALA FL+ L
Sbjct: 481 SKSEDASGVKVSEEMGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMALASFLARL 540

Query: 197 VEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           V P+ A A  +SSLK++S   P +QLA+RHC LLEDPP
Sbjct: 541 VGPNVATASARSSLKSLSSNYPGMQLAARHCFLLEDPP 578


>ref|XP_010254885.1| PREDICTED: SWI/SNF complex subunit SWI3D isoform X2 [Nelumbo
           nucifera]
          Length = 977

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 55/94 (58%), Positives = 62/94 (65%)
 Frame = +2

Query: 26  KDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGLVEP 205
           KDA    VS   S + AI+AL  AFQAVG         SF EAGN VMAL  FL+GLVEP
Sbjct: 512 KDASDVKVSVEASANCAINALKEAFQAVGSVLGPEGSLSFAEAGNPVMALVAFLAGLVEP 571

Query: 206 DAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDP 307
           D A A  + SLKA+SE SP IQ+A+RHC LLEDP
Sbjct: 572 DVAVASARGSLKAISEESPGIQMATRHCFLLEDP 605


>ref|XP_010254884.1| PREDICTED: SWI/SNF complex subunit SWI3D isoform X1 [Nelumbo
           nucifera]
          Length = 997

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 55/94 (58%), Positives = 62/94 (65%)
 Frame = +2

Query: 26  KDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGLVEP 205
           KDA    VS   S + AI+AL  AFQAVG         SF EAGN VMAL  FL+GLVEP
Sbjct: 512 KDASDVKVSVEASANCAINALKEAFQAVGSVLGPEGSLSFAEAGNPVMALVAFLAGLVEP 571

Query: 206 DAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDP 307
           D A A  + SLKA+SE SP IQ+A+RHC LLEDP
Sbjct: 572 DVAVASARGSLKAISEESPGIQMATRHCFLLEDP 605


>ref|XP_002313800.1| DNA-binding family protein [Populus trichocarpa]
           gi|222850208|gb|EEE87755.1| DNA-binding family protein
           [Populus trichocarpa]
          Length = 1010

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 51/98 (52%), Positives = 66/98 (67%)
 Frame = +2

Query: 17  SERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGL 196
           S+ +DA    VS+   ++VA+ AL  AF+AVGY P+     SF E GN VMALA FL+ L
Sbjct: 481 SKSEDASGVKVSEEMGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMALASFLARL 540

Query: 197 VEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           V P+ A A  +SSLK++S   P +QLA+RHC LLEDPP
Sbjct: 541 VGPNVATASARSSLKSLSSNYPGMQLAARHCFLLEDPP 578


>gb|KHN25365.1| SWI/SNF complex subunit SWI3D [Glycine soja]
          Length = 1042

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 52/99 (52%), Positives = 64/99 (64%)
 Frame = +2

Query: 14  TSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSG 193
           TS+ +DAV   + Q   +D AI+AL  AF AVGY P    P SF + GN VMALA FL+ 
Sbjct: 515 TSKSEDAVKVKIDQEADNDCAINALKEAFAAVGYSPGPEGPSSFADVGNPVMALATFLAH 574

Query: 194 LVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           LV  DAA A   SS+K+M+  SP  +LA+R C LLEDPP
Sbjct: 575 LVGSDAAVASAHSSIKSMTRNSPGTELAARCCFLLEDPP 613


>ref|XP_003540680.1| PREDICTED: SWI/SNF complex subunit SWI3D-like isoform X1 [Glycine
           max]
          Length = 1016

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 52/99 (52%), Positives = 64/99 (64%)
 Frame = +2

Query: 14  TSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSG 193
           TS+ +DAV   + Q   +D AI+AL  AF AVGY P    P SF + GN VMALA FL+ 
Sbjct: 489 TSKSEDAVKVKIDQEADNDCAINALKEAFAAVGYSPGPEGPSSFADVGNPVMALATFLAH 548

Query: 194 LVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           LV  DAA A   SS+K+M+  SP  +LA+R C LLEDPP
Sbjct: 549 LVGSDAAVASAHSSIKSMTRNSPGTELAARCCFLLEDPP 587


>ref|XP_010096186.1| SWI/SNF complex subunit SWI3D [Morus notabilis]
           gi|587874443|gb|EXB63581.1| SWI/SNF complex subunit
           SWI3D [Morus notabilis]
          Length = 1006

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 52/101 (51%), Positives = 65/101 (64%)
 Frame = +2

Query: 17  SERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGL 196
           S+RK+   + V + T +D  I AL  AF+AVGY  +    FSF E GN  MALA FL+ L
Sbjct: 502 SKRKEGSESKVGEETEEDCTIKALKEAFEAVGYPLTCEGSFSFAEVGNPAMALAAFLARL 561

Query: 197 VEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPPTAN 319
           V PD A A   +SLK++S  SP+I+LA RHC LLEDPP  N
Sbjct: 562 VGPDLATASAHNSLKSLSGNSPSIELAVRHCFLLEDPPNDN 602


>ref|XP_011037606.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Populus euphratica]
          Length = 609

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 51/99 (51%), Positives = 64/99 (64%)
 Frame = +2

Query: 14  TSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSG 193
           TS+ +        +   ++VA+ AL  AF+AVGY P+     SF E GN VMALALFL+ 
Sbjct: 473 TSKSEYVSGVKAGEEMGENVALKALTEAFEAVGYSPTPENRLSFSEVGNPVMALALFLAR 532

Query: 194 LVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           LV PD A A   S+LK++S  SP +QLASRHC LLEDPP
Sbjct: 533 LVGPDVATASACSALKSLSSNSPGMQLASRHCFLLEDPP 571


>ref|XP_011037543.1| PREDICTED: SWI/SNF complex subunit SWI3D-like isoform X2 [Populus
           euphratica]
          Length = 1006

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 51/99 (51%), Positives = 64/99 (64%)
 Frame = +2

Query: 14  TSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSG 193
           TS+ +        +   ++VA+ AL  AF+AVGY P+     SF E GN VMALALFL+ 
Sbjct: 473 TSKSEYVSGVKAGEEMGENVALKALTEAFEAVGYSPTPENRLSFSEVGNPVMALALFLAR 532

Query: 194 LVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           LV PD A A   S+LK++S  SP +QLASRHC LLEDPP
Sbjct: 533 LVGPDVATASACSALKSLSSNSPGMQLASRHCFLLEDPP 571


>ref|XP_011037542.1| PREDICTED: SWI/SNF complex subunit SWI3D-like isoform X1 [Populus
           euphratica]
          Length = 1020

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 51/99 (51%), Positives = 64/99 (64%)
 Frame = +2

Query: 14  TSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSG 193
           TS+ +        +   ++VA+ AL  AF+AVGY P+     SF E GN VMALALFL+ 
Sbjct: 473 TSKSEYVSGVKAGEEMGENVALKALTEAFEAVGYSPTPENRLSFSEVGNPVMALALFLAR 532

Query: 194 LVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           LV PD A A   S+LK++S  SP +QLASRHC LLEDPP
Sbjct: 533 LVGPDVATASACSALKSLSSNSPGMQLASRHCFLLEDPP 571


>ref|XP_002305423.1| DNA-binding family protein [Populus trichocarpa]
           gi|222848387|gb|EEE85934.1| DNA-binding family protein
           [Populus trichocarpa]
          Length = 1005

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 50/99 (50%), Positives = 64/99 (64%)
 Frame = +2

Query: 14  TSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSG 193
           TS+ +D       +   ++VA+ AL  AF+AVGY P+     SF E GN VMA+A FL+ 
Sbjct: 472 TSKSEDVSGVKAGEEIGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMAVASFLAR 531

Query: 194 LVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPP 310
           LV PD A A   S+LK++S  SP +QLASRHC LLEDPP
Sbjct: 532 LVGPDVATASACSALKSLSSNSPGMQLASRHCFLLEDPP 570


>ref|XP_010230705.1| PREDICTED: SWI/SNF complex subunit SWI3D isoform X2 [Brachypodium
           distachyon]
          Length = 917

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 54/103 (52%), Positives = 68/103 (66%)
 Frame = +2

Query: 5   PSGTSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALF 184
           P  + E    V+ N S   +   AI  L +AF+AVGY P  G+  SF +AGN VM LA F
Sbjct: 503 PDTSGENASNVAINTSGENAPCNAIDILKSAFEAVGYFP--GDQGSFADAGNPVMTLAAF 560

Query: 185 LSGLVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPPT 313
           L+GLVE D A    +SSLKA+SE SP++QLASRHC +LEDPP+
Sbjct: 561 LAGLVEDDNATTSCRSSLKAISEDSPSLQLASRHCYILEDPPS 603


>ref|XP_010230701.1| PREDICTED: SWI/SNF complex subunit SWI3D isoform X1 [Brachypodium
           distachyon]
          Length = 942

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 54/103 (52%), Positives = 68/103 (66%)
 Frame = +2

Query: 5   PSGTSERKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALF 184
           P  + E    V+ N S   +   AI  L +AF+AVGY P  G+  SF +AGN VM LA F
Sbjct: 503 PDTSGENASNVAINTSGENAPCNAIDILKSAFEAVGYFP--GDQGSFADAGNPVMTLAAF 560

Query: 185 LSGLVEPDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPPT 313
           L+GLVE D A    +SSLKA+SE SP++QLASRHC +LEDPP+
Sbjct: 561 LAGLVEDDNATTSCRSSLKAISEDSPSLQLASRHCYILEDPPS 603


>gb|EEE59828.1| hypothetical protein OsJ_12391 [Oryza sativa Japonica Group]
          Length = 940

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 51/97 (52%), Positives = 69/97 (71%)
 Frame = +2

Query: 23  RKDAVSTNVSQVTSDDVAISALVAAFQAVGYRPSKGEPFSFLEAGNQVMALALFLSGLVE 202
           ++++V  + S+  + + AI  L +AF+AVGY P      SF +AGN VMALA FL+GLVE
Sbjct: 512 KENSVDVDTSRENASNFAIDTLKSAFEAVGYFPE--HEGSFADAGNPVMALASFLAGLVE 569

Query: 203 PDAAAACTQSSLKAMSEVSPNIQLASRHCLLLEDPPT 313
            D A    +SSLKA+SEVSP +QLA+RHC +LEDPP+
Sbjct: 570 DDTATNSCRSSLKAISEVSPALQLATRHCFILEDPPS 606


Top