BLASTX nr result
ID: Cinnamomum25_contig00029251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00029251
(382 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010274987.1| PREDICTED: ELAV-like protein 3 isoform X3 [N... 111 2e-22
ref|XP_010274986.1| PREDICTED: ELAV-like protein 3 isoform X2 [N... 111 2e-22
ref|XP_010274982.1| PREDICTED: ELAV-like protein 3 isoform X1 [N... 111 2e-22
ref|XP_006836856.2| PREDICTED: ELAV-like protein 1 isoform X1 [A... 104 3e-20
ref|XP_011620990.1| PREDICTED: ELAV-like protein 1 isoform X2 [A... 104 3e-20
ref|XP_011629314.1| PREDICTED: RNA-binding protein Musashi homol... 80 5e-13
gb|ERM97381.1| hypothetical protein AMTR_s00127p00033470 [Ambore... 80 5e-13
gb|ACN40374.1| unknown [Picea sitchensis] 79 9e-13
ref|XP_004232027.1| PREDICTED: heterogeneous nuclear ribonucleop... 77 5e-12
ref|XP_003611735.1| RNA-binding protein [Medicago truncatula] 76 1e-11
ref|XP_009786738.1| PREDICTED: RNA-binding protein Musashi homol... 75 2e-11
ref|XP_009786737.1| PREDICTED: RNA-binding protein Musashi homol... 75 2e-11
ref|XP_009786736.1| PREDICTED: RNA-binding protein Musashi homol... 75 2e-11
ref|XP_009608594.1| PREDICTED: RNA-binding protein Musashi homol... 75 2e-11
ref|XP_009608593.1| PREDICTED: RNA-binding protein Musashi homol... 75 2e-11
ref|XP_006339894.1| PREDICTED: heterogeneous nuclear ribonucleop... 75 2e-11
ref|XP_001785814.1| predicted protein [Physcomitrella patens] gi... 74 4e-11
ref|XP_011099132.1| PREDICTED: heterogeneous nuclear ribonucleop... 74 5e-11
gb|KEH27526.1| RNA-binding (RRM/RBD/RNP motif) family protein [M... 73 9e-11
gb|ACJ85509.1| unknown [Medicago truncatula] gi|388503058|gb|AFK... 73 9e-11
>ref|XP_010274987.1| PREDICTED: ELAV-like protein 3 isoform X3 [Nelumbo nucifera]
Length = 488
Score = 111 bits (277), Expect = 2e-22
Identities = 67/137 (48%), Positives = 83/137 (60%), Gaps = 10/137 (7%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPK-------LSGHFVKKP 224
DPVT+QHRGIGFVTYEN +SVD L+SE+HELGGS +A+DRATPK +S H++K
Sbjct: 128 DPVTKQHRGIGFVTYENPDSVDHLISETHELGGSRIAIDRATPKEDSRGYRVSSHYLKAT 187
Query: 223 TYSMPHSFGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTV---GTADTSSSNV 53
S + T+ SR E QA+KLL SV +S D+ G G SS V
Sbjct: 188 HDSRTSNIVGYKTDGCSRTATNELQADKLLPSVFHSVKDNTSSGCASIAGGIISIGSSTV 247
Query: 52 QDAVAASGRVEKKMFVG 2
Q A A+ R EKKMF+G
Sbjct: 248 QIAEGATIRAEKKMFIG 264
>ref|XP_010274986.1| PREDICTED: ELAV-like protein 3 isoform X2 [Nelumbo nucifera]
Length = 509
Score = 111 bits (277), Expect = 2e-22
Identities = 67/137 (48%), Positives = 83/137 (60%), Gaps = 10/137 (7%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPK-------LSGHFVKKP 224
DPVT+QHRGIGFVTYEN +SVD L+SE+HELGGS +A+DRATPK +S H++K
Sbjct: 128 DPVTKQHRGIGFVTYENPDSVDHLISETHELGGSRIAIDRATPKEDSRGYRVSSHYLKAT 187
Query: 223 TYSMPHSFGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTV---GTADTSSSNV 53
S + T+ SR E QA+KLL SV +S D+ G G SS V
Sbjct: 188 HDSRTSNIVGYKTDGCSRTATNELQADKLLPSVFHSVKDNTSSGCASIAGGIISIGSSTV 247
Query: 52 QDAVAASGRVEKKMFVG 2
Q A A+ R EKKMF+G
Sbjct: 248 QIAEGATIRAEKKMFIG 264
>ref|XP_010274982.1| PREDICTED: ELAV-like protein 3 isoform X1 [Nelumbo nucifera]
gi|720060836|ref|XP_010274983.1| PREDICTED: ELAV-like
protein 3 isoform X1 [Nelumbo nucifera]
gi|720060840|ref|XP_010274984.1| PREDICTED: ELAV-like
protein 3 isoform X1 [Nelumbo nucifera]
gi|720060844|ref|XP_010274985.1| PREDICTED: ELAV-like
protein 3 isoform X1 [Nelumbo nucifera]
Length = 523
Score = 111 bits (277), Expect = 2e-22
Identities = 67/137 (48%), Positives = 83/137 (60%), Gaps = 10/137 (7%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPK-------LSGHFVKKP 224
DPVT+QHRGIGFVTYEN +SVD L+SE+HELGGS +A+DRATPK +S H++K
Sbjct: 128 DPVTKQHRGIGFVTYENPDSVDHLISETHELGGSRIAIDRATPKEDSRGYRVSSHYLKAT 187
Query: 223 TYSMPHSFGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTV---GTADTSSSNV 53
S + T+ SR E QA+KLL SV +S D+ G G SS V
Sbjct: 188 HDSRTSNIVGYKTDGCSRTATNELQADKLLPSVFHSVKDNTSSGCASIAGGIISIGSSTV 247
Query: 52 QDAVAASGRVEKKMFVG 2
Q A A+ R EKKMF+G
Sbjct: 248 QIAEGATIRAEKKMFIG 264
>ref|XP_006836856.2| PREDICTED: ELAV-like protein 1 isoform X1 [Amborella trichopoda]
Length = 533
Score = 104 bits (259), Expect = 3e-20
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 11/138 (7%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPK-------LSGHFVKKP 224
DP++RQHRGIGFVT+EN ESVDKLMSE+HEL GST+AVDRATPK +S H ++ P
Sbjct: 134 DPLSRQHRGIGFVTFENPESVDKLMSETHELEGSTIAVDRATPKDDTRAYRMSNHHLRTP 193
Query: 223 TY-SMPHSFGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTVGTADTSSS---N 56
+ +MP GY+ G Q N+++ + + G+ + DTSSS N
Sbjct: 194 HFLAMPQMGGYTPVVKDLAALGPIHQPNQIVLPSTFPAQEVPLTGQIIVAGDTSSSGLGN 253
Query: 55 VQDAVAASGRVEKKMFVG 2
Q V +VEKKMFVG
Sbjct: 254 GQVTVQVPRQVEKKMFVG 271
>ref|XP_011620990.1| PREDICTED: ELAV-like protein 1 isoform X2 [Amborella trichopoda]
gi|548839420|gb|ERM99709.1| hypothetical protein
AMTR_s00099p00085080 [Amborella trichopoda]
Length = 527
Score = 104 bits (259), Expect = 3e-20
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 11/138 (7%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPK-------LSGHFVKKP 224
DP++RQHRGIGFVT+EN ESVDKLMSE+HEL GST+AVDRATPK +S H ++ P
Sbjct: 128 DPLSRQHRGIGFVTFENPESVDKLMSETHELEGSTIAVDRATPKDDTRAYRMSNHHLRTP 187
Query: 223 TY-SMPHSFGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTVGTADTSSS---N 56
+ +MP GY+ G Q N+++ + + G+ + DTSSS N
Sbjct: 188 HFLAMPQMGGYTPVVKDLAALGPIHQPNQIVLPSTFPAQEVPLTGQIIVAGDTSSSGLGN 247
Query: 55 VQDAVAASGRVEKKMFVG 2
Q V +VEKKMFVG
Sbjct: 248 GQVTVQVPRQVEKKMFVG 265
>ref|XP_011629314.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Amborella
trichopoda]
Length = 363
Score = 80.1 bits (196), Expect = 5e-13
Identities = 49/103 (47%), Positives = 61/103 (59%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPHS 203
D T+ HRGIGFVTYENSESVD LM+E+HELGGST+ VDRATPK +++P + P
Sbjct: 125 DQTTKGHRGIGFVTYENSESVDTLMAETHELGGSTIVVDRATPKEDE--IRQPMRAPPGG 182
Query: 202 FGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTVGTA 74
+G N + A A L Y +P V +GR V A
Sbjct: 183 YGAYNAYITAATRYAVQGAPTL-----YDHPSSV-YGRGVSGA 219
>gb|ERM97381.1| hypothetical protein AMTR_s00127p00033470 [Amborella trichopoda]
Length = 413
Score = 80.1 bits (196), Expect = 5e-13
Identities = 49/103 (47%), Positives = 61/103 (59%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPHS 203
D T+ HRGIGFVTYENSESVD LM+E+HELGGST+ VDRATPK +++P + P
Sbjct: 175 DQTTKGHRGIGFVTYENSESVDTLMAETHELGGSTIVVDRATPKEDE--IRQPMRAPPGG 232
Query: 202 FGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTVGTA 74
+G N + A A L Y +P V +GR V A
Sbjct: 233 YGAYNAYITAATRYAVQGAPTL-----YDHPSSV-YGRGVSGA 269
>gb|ACN40374.1| unknown [Picea sitchensis]
Length = 520
Score = 79.3 bits (194), Expect = 9e-13
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPK 251
D T+QHRGIGFVTYEN+ESVD++MSESHEL GST+AVDRATPK
Sbjct: 128 DQTTKQHRGIGFVTYENAESVDEVMSESHELAGSTIAVDRATPK 171
>ref|XP_004232027.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Solanum
lycopersicum]
Length = 376
Score = 77.0 bits (188), Expect = 5e-12
Identities = 49/127 (38%), Positives = 68/127 (53%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPHS 203
DP T+ HRGIGF+T+ N+ESVD LMS++HELGGST+ VDRATPK +P M S
Sbjct: 126 DPSTKGHRGIGFITFANAESVDDLMSDTHELGGSTIVVDRATPKEEDF---RPVSRMSQS 182
Query: 202 FGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTVGTADTSSSNVQDAVAASGRV 23
G Y+ A + L + +Y +P + +GR G + G +
Sbjct: 183 GG--GYGAYNAYMSATTRYGALGAPTLYDHPSSM-YGRGGGGGGGGGG----GFPSRGGL 235
Query: 22 EKKMFVG 2
+K+FVG
Sbjct: 236 GQKIFVG 242
>ref|XP_003611735.1| RNA-binding protein [Medicago truncatula]
Length = 403
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/127 (39%), Positives = 66/127 (51%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPHS 203
D ++ HRGIGF+T+ N+ESV+ LMSE+HELGGS V VDRATPK V KPT M
Sbjct: 126 DQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKAREDDV-KPTGRMSQG 184
Query: 202 FGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTVGTADTSSSNVQDAVAASGRV 23
GY N Y + L + +Y +P + +G G + R+
Sbjct: 185 GGYGAYNAYI---STATRYAALGAPTLYDHPGPI-YGSKHGRGEPRR-----------RI 229
Query: 22 EKKMFVG 2
KK+FVG
Sbjct: 230 SKKIFVG 236
>ref|XP_009786738.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform X3
[Nicotiana sylvestris]
Length = 344
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPH- 206
DP T+ HRGIGF+T+ N+ESVD LM ++HELGGST+ VDRATPK +P MP
Sbjct: 104 DPTTKGHRGIGFITFANAESVDDLMGDTHELGGSTIVVDRATPKEED---SRPVSRMPQG 160
Query: 205 SFGYSNTNNY 176
GY N Y
Sbjct: 161 GGGYGAYNAY 170
>ref|XP_009786737.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform X2
[Nicotiana sylvestris]
Length = 365
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPH- 206
DP T+ HRGIGF+T+ N+ESVD LM ++HELGGST+ VDRATPK +P MP
Sbjct: 126 DPTTKGHRGIGFITFANAESVDDLMGDTHELGGSTIVVDRATPKEED---SRPVSRMPQG 182
Query: 205 SFGYSNTNNY 176
GY N Y
Sbjct: 183 GGGYGAYNAY 192
>ref|XP_009786736.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform X1
[Nicotiana sylvestris]
Length = 366
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPH- 206
DP T+ HRGIGF+T+ N+ESVD LM ++HELGGST+ VDRATPK +P MP
Sbjct: 126 DPTTKGHRGIGFITFANAESVDDLMGDTHELGGSTIVVDRATPKEED---SRPVSRMPQG 182
Query: 205 SFGYSNTNNY 176
GY N Y
Sbjct: 183 GGGYGAYNAY 192
>ref|XP_009608594.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform X2
[Nicotiana tomentosiformis]
Length = 345
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPH- 206
DP T+ HRGIGF+T+ N+ESVD LM ++HELGGST+ VDRATPK +P MP
Sbjct: 104 DPTTKGHRGIGFITFANAESVDDLMGDTHELGGSTIVVDRATPKEED---SRPVSRMPQG 160
Query: 205 SFGYSNTNNY 176
GY N Y
Sbjct: 161 GGGYGAYNAY 170
>ref|XP_009608593.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform X1
[Nicotiana tomentosiformis]
Length = 367
Score = 74.7 bits (182), Expect = 2e-11
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPH- 206
DP T+ HRGIGF+T+ N+ESVD LM ++HELGGST+ VDRATPK +P MP
Sbjct: 126 DPTTKGHRGIGFITFANAESVDDLMGDTHELGGSTIVVDRATPKEED---SRPVSRMPQG 182
Query: 205 SFGYSNTNNY 176
GY N Y
Sbjct: 183 GGGYGAYNAY 192
>ref|XP_006339894.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
tuberosum]
Length = 371
Score = 74.7 bits (182), Expect = 2e-11
Identities = 49/127 (38%), Positives = 68/127 (53%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPHS 203
DP T+ HRGIGF+T+ N+ESVD LM+++HELGGST+ VDRATPK +P M S
Sbjct: 126 DPSTKGHRGIGFITFANAESVDDLMNDTHELGGSTIVVDRATPKEEDF---RPVSRM--S 180
Query: 202 FGYSNTNNYSRMEGAEPQANKLLSSVVYSNPDDVGFGRTVGTADTSSSNVQDAVAASGRV 23
G Y+ A + L + +Y +P + +GR G S G +
Sbjct: 181 QGGGGYGAYNAYMSATTRYGALGAPTLYDHPSSM-YGRGGGGGGFPS---------RGGM 230
Query: 22 EKKMFVG 2
+K+FVG
Sbjct: 231 GQKIFVG 237
>ref|XP_001785814.1| predicted protein [Physcomitrella patens]
gi|162662538|gb|EDQ49378.1| predicted protein, partial
[Physcomitrella patens]
Length = 382
Score = 73.9 bits (180), Expect = 4e-11
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSG 242
D ++ HRGIGFVT+EN ESVD LM+E+HELGGST+AVDRATPK G
Sbjct: 119 DQGSKAHRGIGFVTFENPESVDNLMNETHELGGSTIAVDRATPKEDG 165
>ref|XP_011099132.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2
[Sesamum indicum]
Length = 364
Score = 73.6 bits (179), Expect = 5e-11
Identities = 39/70 (55%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPH- 206
DP T+ HRGIGF+T+ N+E+VD LM E+HELGGSTV VDRATPK +P MP
Sbjct: 126 DPTTKGHRGIGFITFANAEAVDDLMVETHELGGSTVVVDRATPKEEDF---RPISRMPQG 182
Query: 205 SFGYSNTNNY 176
GY N Y
Sbjct: 183 GGGYGAYNAY 192
>gb|KEH27526.1| RNA-binding (RRM/RBD/RNP motif) family protein [Medicago
truncatula]
Length = 373
Score = 72.8 bits (177), Expect = 9e-11
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPHS 203
D ++ HRGIGF+T+ N+ESV+ LMSE+HELGGS V VDRATPK KPT M
Sbjct: 126 DQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDD---VKPTGRMSQG 182
Query: 202 FGYSNTNNY 176
GY N Y
Sbjct: 183 GGYGAYNAY 191
>gb|ACJ85509.1| unknown [Medicago truncatula] gi|388503058|gb|AFK39595.1| unknown
[Medicago truncatula]
Length = 397
Score = 72.8 bits (177), Expect = 9e-11
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = -1
Query: 382 DPVTRQHRGIGFVTYENSESVDKLMSESHELGGSTVAVDRATPKLSGHFVKKPTYSMPHS 203
D ++ HRGIGF+T+ N+ESV+ LMSE+HELGGS V VDRATPK KPT M
Sbjct: 126 DQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDD---VKPTGRMSQG 182
Query: 202 FGYSNTNNY 176
GY N Y
Sbjct: 183 GGYGAYNAY 191