BLASTX nr result
ID: Cinnamomum25_contig00028566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00028566
(349 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010257320.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 71 2e-10
ref|XP_008238180.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 70 4e-10
ref|XP_008238179.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 70 4e-10
ref|XP_010102337.1| tRNA-specific 2-thiouridylase mnmA [Morus no... 70 5e-10
ref|XP_009407692.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 70 7e-10
ref|XP_009407684.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 70 7e-10
ref|XP_009407675.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 70 7e-10
ref|XP_007209892.1| hypothetical protein PRUPE_ppa004048mg [Prun... 69 1e-09
ref|XP_010096207.1| 60S ribosomal protein L18a [Morus notabilis]... 67 5e-09
ref|XP_010673634.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 66 8e-09
ref|XP_010673633.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 66 8e-09
ref|XP_008344848.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 66 1e-08
ref|XP_004142116.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 66 1e-08
ref|XP_010906768.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 65 1e-08
ref|XP_010906767.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 65 1e-08
ref|XP_010906766.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 65 1e-08
ref|XP_009347315.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 65 1e-08
ref|XP_009376884.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 65 1e-08
ref|XP_009376883.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 65 1e-08
ref|XP_002282827.2| PREDICTED: mitochondrial tRNA-specific 2-thi... 65 2e-08
>ref|XP_010257320.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Nelumbo nucifera]
Length = 531
Score = 71.2 bits (173), Expect = 2e-10
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -2
Query: 162 LSVSATSLELNLPSISDRDLKPYLSCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
LSVSA +L+L S+ L+PYLSCSMP K L+VAVLLSGGVDSS+ALRLLHA
Sbjct: 47 LSVSAAEHKLSLGLKSNTVLEPYLSCSMPGKRLKVAVLLSGGVDSSVALRLLHA 100
>ref|XP_008238180.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2
[Prunus mume]
Length = 407
Score = 70.5 bits (171), Expect = 4e-10
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
Frame = -2
Query: 213 HFSLFP--PSKSNKIRSKPLS-----VSATSLELNLPSISDRDLKPYLSCSMPDKHLRVA 55
H SLFP P+ + + +PLS SA + P+ + DL PYLSCSMP + L+VA
Sbjct: 25 HLSLFPHSPNPARTLFLRPLSRCCSSSSAVPQTPHPPNSINGDLGPYLSCSMPHQSLKVA 84
Query: 54 VLLSGGVDSSIALRLLHA 1
VLLSGGVDSS+ALRLLHA
Sbjct: 85 VLLSGGVDSSVALRLLHA 102
>ref|XP_008238179.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Prunus mume]
Length = 537
Score = 70.5 bits (171), Expect = 4e-10
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
Frame = -2
Query: 213 HFSLFP--PSKSNKIRSKPLS-----VSATSLELNLPSISDRDLKPYLSCSMPDKHLRVA 55
H SLFP P+ + + +PLS SA + P+ + DL PYLSCSMP + L+VA
Sbjct: 25 HLSLFPHSPNPARTLFLRPLSRCCSSSSAVPQTPHPPNSINGDLGPYLSCSMPHQSLKVA 84
Query: 54 VLLSGGVDSSIALRLLHA 1
VLLSGGVDSS+ALRLLHA
Sbjct: 85 VLLSGGVDSSVALRLLHA 102
>ref|XP_010102337.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]
gi|587905107|gb|EXB93298.1| tRNA-specific
2-thiouridylase mnmA [Morus notabilis]
Length = 580
Score = 70.1 bits (170), Expect = 5e-10
Identities = 38/66 (57%), Positives = 45/66 (68%)
Frame = -2
Query: 198 PPSKSNKIRSKPLSVSATSLELNLPSISDRDLKPYLSCSMPDKHLRVAVLLSGGVDSSIA 19
P SKS R +S ++ + D D++PYLSCSMP K LRVAVLLSGGVDSS+A
Sbjct: 86 PTSKSLVFRLFSVSAASAVSSSHHSKSFDGDIEPYLSCSMPHKRLRVAVLLSGGVDSSVA 145
Query: 18 LRLLHA 1
LRLLHA
Sbjct: 146 LRLLHA 151
>ref|XP_009407692.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X3
[Musa acuminata subsp. malaccensis]
Length = 414
Score = 69.7 bits (169), Expect = 7e-10
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 20/90 (22%)
Frame = -2
Query: 210 FSLFPPSKSNKIRSKPLSVSATSLEL------------------NLPSISDR--DLKPYL 91
F + P + S + S P S S+TS L +LPS+S DL+PYL
Sbjct: 40 FFISPRASSMSLASSPSSSSSTSSSLPVLTLPPPPPPPPSGHAPHLPSVSSGAVDLEPYL 99
Query: 90 SCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
CSMP + LRVAVLLSGGVDSS ALRLLHA
Sbjct: 100 GCSMPGRRLRVAVLLSGGVDSSTALRLLHA 129
>ref|XP_009407684.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2
[Musa acuminata subsp. malaccensis]
Length = 420
Score = 69.7 bits (169), Expect = 7e-10
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 20/90 (22%)
Frame = -2
Query: 210 FSLFPPSKSNKIRSKPLSVSATSLEL------------------NLPSISDR--DLKPYL 91
F + P + S + S P S S+TS L +LPS+S DL+PYL
Sbjct: 40 FFISPRASSMSLASSPSSSSSTSSSLPVLTLPPPPPPPPSGHAPHLPSVSSGAVDLEPYL 99
Query: 90 SCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
CSMP + LRVAVLLSGGVDSS ALRLLHA
Sbjct: 100 GCSMPGRRLRVAVLLSGGVDSSTALRLLHA 129
>ref|XP_009407675.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Musa acuminata subsp. malaccensis]
Length = 506
Score = 69.7 bits (169), Expect = 7e-10
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 20/90 (22%)
Frame = -2
Query: 210 FSLFPPSKSNKIRSKPLSVSATSLEL------------------NLPSISDR--DLKPYL 91
F + P + S + S P S S+TS L +LPS+S DL+PYL
Sbjct: 40 FFISPRASSMSLASSPSSSSSTSSSLPVLTLPPPPPPPPSGHAPHLPSVSSGAVDLEPYL 99
Query: 90 SCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
CSMP + LRVAVLLSGGVDSS ALRLLHA
Sbjct: 100 GCSMPGRRLRVAVLLSGGVDSSTALRLLHA 129
>ref|XP_007209892.1| hypothetical protein PRUPE_ppa004048mg [Prunus persica]
gi|462405627|gb|EMJ11091.1| hypothetical protein
PRUPE_ppa004048mg [Prunus persica]
Length = 533
Score = 68.9 bits (167), Expect = 1e-09
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
Frame = -2
Query: 213 HFSLFP--PSKSNKIRSKPLS-----VSATSLELNLPSISDRDLKPYLSCSMPDKHLRVA 55
H SLFP P+ + + PLS SA + P+ + DL PYLSCSMP + L+VA
Sbjct: 25 HLSLFPHSPNPARTLFLGPLSRCCSSSSAVPQTPHPPNSINGDLGPYLSCSMPHQSLKVA 84
Query: 54 VLLSGGVDSSIALRLLHA 1
VLLSGGVDSS+ALRLLHA
Sbjct: 85 VLLSGGVDSSVALRLLHA 102
>ref|XP_010096207.1| 60S ribosomal protein L18a [Morus notabilis]
gi|587874464|gb|EXB63602.1| 60S ribosomal protein L18a
[Morus notabilis]
Length = 461
Score = 67.0 bits (162), Expect = 5e-09
Identities = 36/66 (54%), Positives = 43/66 (65%)
Frame = -2
Query: 198 PPSKSNKIRSKPLSVSATSLELNLPSISDRDLKPYLSCSMPDKHLRVAVLLSGGVDSSIA 19
P SKS R +S ++ + P D D++PYLSCSMP K LRVAVLLSGGVDSS+
Sbjct: 171 PTSKSLVFRLFSVSAASAVSSSHYPKSFDGDIEPYLSCSMPHKRLRVAVLLSGGVDSSVT 230
Query: 18 LRLLHA 1
LLHA
Sbjct: 231 WCLLHA 236
>ref|XP_010673634.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2
[Beta vulgaris subsp. vulgaris]
Length = 402
Score = 66.2 bits (160), Expect = 8e-09
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = -2
Query: 171 SKPLSVSATSLELNLPSIS--DRDLKPYLSCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
S+P S+S+ ++ + D D++PYLSCSMP K L+VAVL+SGGVDSS+ALRLLHA
Sbjct: 49 SRPFSLSSAISPISSSNSQTLDFDVEPYLSCSMPGKRLKVAVLISGGVDSSVALRLLHA 107
>ref|XP_010673633.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Beta vulgaris subsp. vulgaris]
gi|870863324|gb|KMT14488.1| hypothetical protein
BVRB_4g072600 [Beta vulgaris subsp. vulgaris]
Length = 534
Score = 66.2 bits (160), Expect = 8e-09
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = -2
Query: 171 SKPLSVSATSLELNLPSIS--DRDLKPYLSCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
S+P S+S+ ++ + D D++PYLSCSMP K L+VAVL+SGGVDSS+ALRLLHA
Sbjct: 49 SRPFSLSSAISPISSSNSQTLDFDVEPYLSCSMPGKRLKVAVLISGGVDSSVALRLLHA 107
>ref|XP_008344848.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Malus domestica]
Length = 581
Score = 65.9 bits (159), Expect = 1e-08
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 7/72 (9%)
Frame = -2
Query: 195 PSKSNKIRSKPLSVSATSLEL-------NLPSISDRDLKPYLSCSMPDKHLRVAVLLSGG 37
P+ + + +P S+SA S+ P+ + D+ PYLSCSMP + L+VAVLLSGG
Sbjct: 102 PTPTTLLFLRPFSLSARSVNCFSVPQTPRAPNSFNGDVGPYLSCSMPHQSLKVAVLLSGG 161
Query: 36 VDSSIALRLLHA 1
VDSS+ALRLLHA
Sbjct: 162 VDSSVALRLLHA 173
>ref|XP_004142116.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Cucumis
sativus] gi|700199017|gb|KGN54175.1| hypothetical
protein Csa_4G291390 [Cucumis sativus]
Length = 538
Score = 65.9 bits (159), Expect = 1e-08
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = -2
Query: 159 SVSATSLELNLPSISDRDLKPYLSCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
+V TSL + +SD D P+LSCSMP L+VAVLLSGGVDSS+ALRLLHA
Sbjct: 51 AVHNTSLSSSSKPLSDADFLPFLSCSMPTYPLKVAVLLSGGVDSSVALRLLHA 103
>ref|XP_010906768.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X3
[Elaeis guineensis]
Length = 401
Score = 65.5 bits (158), Expect = 1e-08
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = -2
Query: 126 PSISDR--DLKPYLSCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
PSIS L+PYL CSMP +HL+VAVLLSGGVDSS+ALRLLHA
Sbjct: 73 PSISSNAVHLEPYLGCSMPGRHLKVAVLLSGGVDSSVALRLLHA 116
>ref|XP_010906767.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2
[Elaeis guineensis]
Length = 455
Score = 65.5 bits (158), Expect = 1e-08
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = -2
Query: 126 PSISDR--DLKPYLSCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
PSIS L+PYL CSMP +HL+VAVLLSGGVDSS+ALRLLHA
Sbjct: 73 PSISSNAVHLEPYLGCSMPGRHLKVAVLLSGGVDSSVALRLLHA 116
>ref|XP_010906766.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Elaeis guineensis]
Length = 495
Score = 65.5 bits (158), Expect = 1e-08
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = -2
Query: 126 PSISDR--DLKPYLSCSMPDKHLRVAVLLSGGVDSSIALRLLHA 1
PSIS L+PYL CSMP +HL+VAVLLSGGVDSS+ALRLLHA
Sbjct: 73 PSISSNAVHLEPYLGCSMPGRHLKVAVLLSGGVDSSVALRLLHA 116
>ref|XP_009347315.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Pyrus x bretschneideri]
gi|694441086|ref|XP_009347316.1| PREDICTED:
mitochondrial tRNA-specific 2-thiouridylase 1-like
[Pyrus x bretschneideri]
Length = 588
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Frame = -2
Query: 195 PSKSNKIRSKPLSVSATSLEL----NLPSISDR---DLKPYLSCSMPDKHLRVAVLLSGG 37
P+ + ++ +P S+SA S+ P S+ D+ PYLSCSMP + L+VAVLLSGG
Sbjct: 35 PTPTTRLFLRPFSLSARSVNCFSVPQTPRSSNSFNGDVGPYLSCSMPHQRLKVAVLLSGG 94
Query: 36 VDSSIALRLLHA 1
VDSS+ALRLLHA
Sbjct: 95 VDSSVALRLLHA 106
>ref|XP_009376884.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
isoform X2 [Pyrus x bretschneideri]
Length = 578
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Frame = -2
Query: 195 PSKSNKIRSKPLSVSATSLEL----NLPSISDR---DLKPYLSCSMPDKHLRVAVLLSGG 37
P+ + ++ +P S+SA S+ P S+ D+ PYLSCSMP + L+VAVLLSGG
Sbjct: 96 PTPTTRLFVRPFSLSARSVNCFSVPQTPRSSNSFNGDVGPYLSCSMPHQRLKVAVLLSGG 155
Query: 36 VDSSIALRLLHA 1
VDSS+ALRLLHA
Sbjct: 156 VDSSVALRLLHA 167
>ref|XP_009376883.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
isoform X1 [Pyrus x bretschneideri]
Length = 579
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Frame = -2
Query: 195 PSKSNKIRSKPLSVSATSLEL----NLPSISDR---DLKPYLSCSMPDKHLRVAVLLSGG 37
P+ + ++ +P S+SA S+ P S+ D+ PYLSCSMP + L+VAVLLSGG
Sbjct: 96 PTPTTRLFVRPFSLSARSVNCFSVPQTPRSSNSFNGDVGPYLSCSMPHQRLKVAVLLSGG 155
Query: 36 VDSSIALRLLHA 1
VDSS+ALRLLHA
Sbjct: 156 VDSSVALRLLHA 167
>ref|XP_002282827.2| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Vitis
vinifera] gi|297746327|emb|CBI16383.3| unnamed protein
product [Vitis vinifera]
Length = 544
Score = 64.7 bits (156), Expect = 2e-08
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = -2
Query: 207 SLFPPSKSNKIRSKPLSVSATSLELNLPS-ISDRDLKPYLSCSMPDKHLRVAVLLSGGVD 31
+L P + + + + S T+ PS + + DL+PYLSCS+P+ L++AVLLSGGVD
Sbjct: 40 NLRPSITTAAVAATSAAASGTTTITTPPSNLFNADLQPYLSCSLPNNRLKIAVLLSGGVD 99
Query: 30 SSIALRLLHA 1
SS+ALRLLHA
Sbjct: 100 SSVALRLLHA 109