BLASTX nr result

ID: Cinnamomum25_contig00028556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00028556
         (618 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010259042.1| PREDICTED: ycf20-like protein [Nelumbo nucif...    70   6e-10
ref|XP_010909301.1| PREDICTED: ycf20-like protein isoform X1 [El...    57   7e-06

>ref|XP_010259042.1| PREDICTED: ycf20-like protein [Nelumbo nucifera]
           gi|720009783|ref|XP_010259043.1| PREDICTED: ycf20-like
           protein [Nelumbo nucifera]
           gi|720009787|ref|XP_010259044.1| PREDICTED: ycf20-like
           protein [Nelumbo nucifera]
          Length = 220

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 35/85 (41%), Positives = 53/85 (62%)
 Frame = -3

Query: 256 MVMATKISALPSYRENVVLLPSKGLRARFVVVGCLQPTSIGYSRRLHPYLCLFQVAMPPS 77
           M+MAT++S +  +  N +   S+ LR+RF+V+ CL  T+   + RL P LC   V+ P S
Sbjct: 1   MMMATRLSVIRGHPVNNIHTSSRCLRSRFLVLACLHKTAFASTCRLFPQLCFSHVSAPSS 60

Query: 76  INSSRRQDWSVRSNVNDGISDPSGS 2
           +NS +R  WSVRS+V+    +P GS
Sbjct: 61  VNSPKRMIWSVRSSVDGSGVEPPGS 85


>ref|XP_010909301.1| PREDICTED: ycf20-like protein isoform X1 [Elaeis guineensis]
           gi|743762676|ref|XP_010909310.1| PREDICTED: ycf20-like
           protein isoform X2 [Elaeis guineensis]
          Length = 217

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 33/83 (39%), Positives = 49/83 (59%)
 Frame = -3

Query: 250 MATKISALPSYRENVVLLPSKGLRARFVVVGCLQPTSIGYSRRLHPYLCLFQVAMPPSIN 71
           M  + S L  Y+E + L   K  R+RF+ V  LQ     Y++ + P  CL  +A+P S+N
Sbjct: 1   MIAQPSTLSCYKEGIFLPSLKCSRSRFLFVSYLQKPVFVYNKIICPPRCLSCLAVP-SLN 59

Query: 70  SSRRQDWSVRSNVNDGISDPSGS 2
           +SR+  W+V+S V+D  SDP GS
Sbjct: 60  NSRQVSWAVKSMVDDSSSDPPGS 82


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