BLASTX nr result

ID: Cinnamomum25_contig00027994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00027994
         (321 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS68745.1| hypothetical protein M569_06026, partial [Genlise...    61   3e-07
ref|XP_006356467.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_010264776.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_008233785.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_012466113.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
gb|KJB84136.1| hypothetical protein B456_N006800 [Gossypium raim...    59   2e-06
gb|KJB84135.1| hypothetical protein B456_N006800 [Gossypium raim...    59   2e-06
ref|XP_009623319.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
emb|CDP17497.1| unnamed protein product [Coffea canephora]             59   2e-06
ref|XP_010318234.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...    56   8e-06

>gb|EPS68745.1| hypothetical protein M569_06026, partial [Genlisea aurea]
          Length = 269

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = -2

Query: 167 YDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 30
           YD  INEAGR+RDF+ V+ L+S R+  G FNT NTFKF+A +P+++
Sbjct: 1   YDELINEAGRNRDFAAVRDLISRRLAAGCFNTNNTFKFIAAEPSAV 46


>ref|XP_006356467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g56030-like isoform X1 [Solanum tuberosum]
           gi|565380133|ref|XP_006356468.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g56030-like isoform X2 [Solanum tuberosum]
          Length = 329

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSLLPPALLS 9
           D  +  +YD RIN+AGR  DF+TV  LL++R + G FNT NTFKF++ +  S+L   L +
Sbjct: 33  DVPSCTNYDERINKAGREGDFTTVHHLLNKRARDGFFNTNNTFKFISTNNVSILDDLLET 92

Query: 8   IS 3
           I+
Sbjct: 93  IA 94


>ref|XP_010264776.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56030
           [Nelumbo nucifera]
          Length = 342

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVA---DDPTSLL 27
           D+ TSA YD  +N AG SRDF+T+  LL++R + G FNTTNTFKF+    DD + L+
Sbjct: 45  DKPTSAHYDQLVNIAGHSRDFTTLHYLLNKRTKDGCFNTTNTFKFITGAEDDLSDLI 101


>ref|XP_008233785.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56030
           [Prunus mume]
          Length = 328

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 30
           D  TSA YD ++N AGRSRDF  ++ LL++R++   FNTTNTFKF+     SL
Sbjct: 37  DIPTSAYYDDQVNAAGRSRDFDGLRHLLNKRVKDHCFNTTNTFKFITSTDASL 89


>ref|XP_012466113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g56030-like [Gossypium raimondii]
          Length = 365

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFV--ADDPTSLLPPAL 15
           D+ TS+ YDH++ +AGR+ D +TV  LL++RI+ G FNTT TF F+   D   S+L P +
Sbjct: 70  DEPTSSYYDHQVFKAGRNGDMATVGYLLNKRIKDGCFNTTKTFSFITNTDSSLSILDPLI 129

Query: 14  LSIS 3
            ++S
Sbjct: 130 QTLS 133


>gb|KJB84136.1| hypothetical protein B456_N006800 [Gossypium raimondii]
          Length = 338

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFV--ADDPTSLLPPAL 15
           D+ TS+ YDH++ +AGR+ D +TV  LL++RI+ G FNTT TF F+   D   S+L P +
Sbjct: 43  DEPTSSYYDHQVFKAGRNGDMATVGYLLNKRIKDGCFNTTKTFSFITNTDSSLSILDPLI 102

Query: 14  LSIS 3
            ++S
Sbjct: 103 QTLS 106


>gb|KJB84135.1| hypothetical protein B456_N006800 [Gossypium raimondii]
          Length = 367

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFV--ADDPTSLLPPAL 15
           D+ TS+ YDH++ +AGR+ D +TV  LL++RI+ G FNTT TF F+   D   S+L P +
Sbjct: 72  DEPTSSYYDHQVFKAGRNGDMATVGYLLNKRIKDGCFNTTKTFSFITNTDSSLSILDPLI 131

Query: 14  LSIS 3
            ++S
Sbjct: 132 QTLS 135


>ref|XP_009623319.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g56030-like [Nicotiana tomentosiformis]
          Length = 326

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/55 (54%), Positives = 38/55 (69%)
 Frame = -2

Query: 167 YDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSLLPPALLSIS 3
           YD RINEAGR  DF+TV  LL++R+  G FNT NTFKFV+    S+L   L +I+
Sbjct: 41  YDARINEAGRQGDFATVHHLLNKRVTDGFFNTINTFKFVSTTNLSILDDLLDTIA 95


>emb|CDP17497.1| unnamed protein product [Coffea canephora]
          Length = 322

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADD 42
           D  +SA+YD+ IN+AGR RDF TV+ LL +R + G F T NTFKF++ D
Sbjct: 33  DSPSSANYDYLINKAGRDRDFGTVQHLLMKRTRDGCFYTNNTFKFISTD 81


>ref|XP_010318234.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial [Solanum lycopersicum]
           gi|723683423|ref|XP_010318235.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial [Solanum lycopersicum]
           gi|723683426|ref|XP_010318236.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial [Solanum lycopersicum]
           gi|723683429|ref|XP_010318237.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial [Solanum lycopersicum]
           gi|723683432|ref|XP_010318238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial [Solanum lycopersicum]
           gi|723683435|ref|XP_010318239.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial [Solanum lycopersicum]
           gi|723683438|ref|XP_010318240.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial [Solanum lycopersicum]
           gi|723683441|ref|XP_010318242.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial [Solanum lycopersicum]
          Length = 329

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSLLPPAL 15
           D  +  +YD RIN+AGR  DF+TV  LL++R + G FNT NTFKF+     S+L   L
Sbjct: 33  DVPSCTNYDERINKAGREGDFTTVHQLLNKRARDGFFNTNNTFKFIYTTNVSILDDLL 90


>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/53 (49%), Positives = 36/53 (67%)
 Frame = -2

Query: 188 DQVTSASYDHRINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 30
           D+ T+A YD  +N AG  RDF T+  LL++R++   FNTTNTFKF+ +   SL
Sbjct: 323 DKPTAAYYDGLVNAAGHERDFKTLHHLLNKRVRDHCFNTTNTFKFITNTDNSL 375


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