BLASTX nr result
ID: Cinnamomum25_contig00027911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00027911
(560 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis tha... 66 1e-08
emb|CDY57965.1| BnaCnng32640D [Brassica napus] 64 3e-08
ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyr... 64 3e-08
ref|XP_006292441.1| hypothetical protein CARUB_v10018659mg [Caps... 63 7e-08
ref|XP_010688797.1| PREDICTED: DNA-binding protein HEXBP-like [B... 63 1e-07
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila] 63 1e-07
ref|XP_006401381.1| hypothetical protein EUTSA_v10013799mg [Eutr... 62 1e-07
emb|CDY17384.1| BnaA10g10180D [Brassica napus] 62 2e-07
ref|XP_009120119.1| PREDICTED: DNA-binding protein HEXBP [Brassi... 61 3e-07
gb|KFK40133.1| hypothetical protein AALP_AA3G335000 [Arabis alpina] 60 5e-07
gb|KHG04585.1| Cellular nucleic acid-binding [Gossypium arboreum] 59 1e-06
ref|XP_004981536.1| PREDICTED: DNA-binding protein HEXBP-like [S... 59 1e-06
ref|XP_003558095.1| PREDICTED: DNA-binding protein HEXBP-like [B... 59 2e-06
ref|XP_002264670.1| PREDICTED: cold shock protein 1 [Vitis vinif... 58 3e-06
ref|XP_010535814.1| PREDICTED: DNA topoisomerase 3-alpha [Tarena... 57 4e-06
ref|XP_008229742.1| PREDICTED: DNA-binding protein HEXBP-like [P... 57 5e-06
gb|EEC76291.1| hypothetical protein OsI_13802 [Oryza sativa Indi... 57 5e-06
ref|XP_007214869.1| hypothetical protein PRUPE_ppa020564mg [Prun... 57 5e-06
ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [S... 57 5e-06
gb|ABF99235.1| GRF zinc finger family protein, expressed [Oryza ... 57 5e-06
>ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis
thaliana] gi|17529084|gb|AAL38752.1| unknown protein
[Arabidopsis thaliana] gi|22136980|gb|AAM91719.1|
unknown protein [Arabidopsis thaliana]
gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle
protein [Arabidopsis thaliana]
Length = 372
Score = 65.9 bits (159), Expect = 1e-08
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
CPCG G +++TS+TP N GRKF+KCPN GGCG F W D +
Sbjct: 96 CPCGVGICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAV 139
>emb|CDY57965.1| BnaCnng32640D [Brassica napus]
Length = 377
Score = 64.3 bits (155), Expect = 3e-08
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = -3
Query: 381 KCPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
KCPCG+G ++TS+T N GRKF+KCPN GGCG F W D +
Sbjct: 98 KCPCGNGVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAV 142
>ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
gi|297321433|gb|EFH51854.1| zinc knuckle family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 64.3 bits (155), Expect = 3e-08
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
CPCG G +++TS TP N GRKF+KCPN GGCG F W D +
Sbjct: 95 CPCGVGLCLVLTSTTPKNPGRKFYKCPNREENGGCGFFQWCDAV 138
>ref|XP_006292441.1| hypothetical protein CARUB_v10018659mg [Capsella rubella]
gi|482561148|gb|EOA25339.1| hypothetical protein
CARUB_v10018659mg [Capsella rubella]
Length = 433
Score = 63.2 bits (152), Expect = 7e-08
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = -3
Query: 396 LDWAPK-CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
LD+ K CPCG G +++TS+T N GRKF+KCPN GGCG F W D +
Sbjct: 88 LDFPEKSCPCGVGLCLVLTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAV 138
>ref|XP_010688797.1| PREDICTED: DNA-binding protein HEXBP-like [Beta vulgaris subsp.
vulgaris] gi|870850593|gb|KMT02693.1| hypothetical
protein BVRB_9g203700 [Beta vulgaris subsp. vulgaris]
Length = 370
Score = 62.8 bits (151), Expect = 1e-07
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEIAPEC 235
CPCG G +L+T++T N GRKF++CP GGCG F W DE+A +C
Sbjct: 149 CPCGLGNCLLLTANTERNRGRKFFRCPVRQENGGCGFFEWYDEMAEKC 196
>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
Length = 369
Score = 62.8 bits (151), Expect = 1e-07
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
CPCG G +++TS+T N GRKF+KCPN GGCG F W D +
Sbjct: 92 CPCGVGLCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAV 135
>ref|XP_006401381.1| hypothetical protein EUTSA_v10013799mg [Eutrema salsugineum]
gi|557102471|gb|ESQ42834.1| hypothetical protein
EUTSA_v10013799mg [Eutrema salsugineum]
Length = 384
Score = 62.4 bits (150), Expect = 1e-07
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
CPCG G +++TS+T N GRKF+KCPN GGCG F W D +
Sbjct: 103 CPCGVGVCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAV 146
>emb|CDY17384.1| BnaA10g10180D [Brassica napus]
Length = 244
Score = 61.6 bits (148), Expect = 2e-07
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
CPCG G ++TS+T N GRKF+KCPN GGCG+F W D +
Sbjct: 98 CPCGAGVCSILTSNTQKNPGRKFYKCPNREENGGCGVFQWCDAV 141
>ref|XP_009120119.1| PREDICTED: DNA-binding protein HEXBP [Brassica rapa]
Length = 415
Score = 61.2 bits (147), Expect = 3e-07
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
CPCG G ++TS+T N GRKF+KCPN GGCG F W D +
Sbjct: 98 CPCGAGVCSILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAV 141
>gb|KFK40133.1| hypothetical protein AALP_AA3G335000 [Arabis alpina]
Length = 414
Score = 60.5 bits (145), Expect = 5e-07
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEI 247
C CG G +++TS+T N GRKF+KCPN GGCG F W D +
Sbjct: 99 CSCGSGVCLILTSNTQKNPGRKFYKCPNKEDNGGCGFFQWCDAV 142
>gb|KHG04585.1| Cellular nucleic acid-binding [Gossypium arboreum]
Length = 243
Score = 59.3 bits (142), Expect = 1e-06
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMD-EIAPEC--IPM 226
CPCG G +++T+HT N GR F+KCP GGCG F+W D +IA + IPM
Sbjct: 76 CPCGSGPCLILTAHTERNRGRMFYKCPLRQENGGCGFFLWCDNDIASQTNNIPM 129
>ref|XP_004981536.1| PREDICTED: DNA-binding protein HEXBP-like [Setaria italica]
Length = 370
Score = 58.9 bits (141), Expect = 1e-06
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEIAP 241
CPCG G +++TS+TP N GRKF+KCP L GGC F W D +P
Sbjct: 145 CPCGAGSCLVLTSNTPRNPGRKFYKCP-LRDNGGCNFFEWCDAPSP 189
Score = 58.5 bits (140), Expect = 2e-06
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEIAP 241
CPCG G +++T+ T N+GR+F++CP G G CG F W DE P
Sbjct: 211 CPCGAGACLILTTKTGKNVGRQFYRCPGNQGGGSCGFFKWCDEQQP 256
>ref|XP_003558095.1| PREDICTED: DNA-binding protein HEXBP-like [Brachypodium distachyon]
Length = 366
Score = 58.5 bits (140), Expect = 2e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEIAP 241
CPCG G +++TS+TP N GRKF++CP + GGC +F W D +P
Sbjct: 147 CPCGAGICLVLTSNTPRNPGRKFYRCP-MRDNGGCNMFEWCDAPSP 191
>ref|XP_002264670.1| PREDICTED: cold shock protein 1 [Vitis vinifera]
gi|296084189|emb|CBI24577.3| unnamed protein product
[Vitis vinifera]
Length = 296
Score = 57.8 bits (138), Expect = 3e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMD 253
CPCG G +++TS+T N GRKF+KCP GGCG F W D
Sbjct: 95 CPCGLGTCLILTSNTQKNPGRKFYKCPLREENGGCGFFQWCD 136
>ref|XP_010535814.1| PREDICTED: DNA topoisomerase 3-alpha [Tarenaya hassleriana]
gi|729328398|ref|XP_010535815.1| PREDICTED: DNA
topoisomerase 3-alpha [Tarenaya hassleriana]
Length = 329
Score = 57.4 bits (137), Expect = 4e-06
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDE 250
C CG G +++TS+T N GRKF+KCP GGCG F W DE
Sbjct: 120 CTCGVGICLILTSNTQKNPGRKFYKCPVREENGGCGFFQWCDE 162
>ref|XP_008229742.1| PREDICTED: DNA-binding protein HEXBP-like [Prunus mume]
Length = 352
Score = 57.0 bits (136), Expect = 5e-06
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMD 253
CPCG G +++T++T N GRKF+KCP GGCG F W D
Sbjct: 147 CPCGFGACMVLTANTEKNRGRKFYKCPLRQENGGCGFFEWCD 188
>gb|EEC76291.1| hypothetical protein OsI_13802 [Oryza sativa Indica Group]
Length = 384
Score = 57.0 bits (136), Expect = 5e-06
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEIAP 241
CPCG G +++TS+TP N GRKF++CP + GGC F W D +P
Sbjct: 163 CPCGAGSCLVLTSNTPRNPGRKFYRCP-MRDNGGCNYFEWCDNPSP 207
>ref|XP_007214869.1| hypothetical protein PRUPE_ppa020564mg [Prunus persica]
gi|462411019|gb|EMJ16068.1| hypothetical protein
PRUPE_ppa020564mg [Prunus persica]
Length = 352
Score = 57.0 bits (136), Expect = 5e-06
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMD 253
CPCG G +++T++T N GRKF+KCP GGCG F W D
Sbjct: 147 CPCGFGACMVLTANTEKNRGRKFYKCPLRQENGGCGFFEWCD 188
>ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
gi|241917628|gb|EER90772.1| hypothetical protein
SORBIDRAFT_01g005940 [Sorghum bicolor]
Length = 366
Score = 57.0 bits (136), Expect = 5e-06
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEIAP 241
CPCG G +++T+ T N+GR+F++CP G G CG F W DE P
Sbjct: 205 CPCGAGTCLILTTKTGKNVGRQFFRCPLNQGGGSCGFFKWCDEQQP 250
>gb|ABF99235.1| GRF zinc finger family protein, expressed [Oryza sativa Japonica
Group]
Length = 405
Score = 57.0 bits (136), Expect = 5e-06
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = -3
Query: 378 CPCGHGFMILMTSHTPSNLGRKFWKCPNLHGEGGCGLFIWMDEIAP 241
CPCG G +++TS+TP N GRKF++CP + GGC F W D +P
Sbjct: 163 CPCGAGSCLVLTSNTPRNPGRKFYRCP-MRDNGGCNYFEWCDNPSP 207