BLASTX nr result

ID: Cinnamomum25_contig00026009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00026009
         (802 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49066.1| unknown [Lotus japonicus]                               58   6e-06
gb|AFK34328.1| unknown [Lotus japonicus]                               58   6e-06
gb|AFK49440.1| unknown [Lotus japonicus]                               58   8e-06

>gb|AFK49066.1| unknown [Lotus japonicus]
          Length = 247

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 35/108 (32%), Positives = 56/108 (51%)
 Frame = -3

Query: 713 HFLNMLCYLLLAWYGLPNISDDNVLLSVVNIIRAALEAAVLLFHISKTPSRKDVVDVLTI 534
           + + +L  LL AWYGLP +S DN+L+S VN   AA+E   +L  I+  P +K+   +  +
Sbjct: 44  YVMTLLNCLLSAWYGLPFVSPDNILVSTVNGTGAAIEIVYVLIFITLAP-KKEKAKIFCL 102

Query: 533 STIGSLVFCTCFYYMEKNLNVEGKKAVFGYAPVGFSVVLMIPPVLDLR 390
            T   LVF    +     L+   +K   G+A   FS ++   P+  +R
Sbjct: 103 FTFVLLVFSVVIFVSLCALHGNSRKLFCGFAAAIFSAIMYGSPLSIMR 150


>gb|AFK34328.1| unknown [Lotus japonicus]
          Length = 247

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 35/108 (32%), Positives = 56/108 (51%)
 Frame = -3

Query: 713 HFLNMLCYLLLAWYGLPNISDDNVLLSVVNIIRAALEAAVLLFHISKTPSRKDVVDVLTI 534
           + + +L  LL AWYGLP +S DN+L+S VN   AA+E   +L  I+  P +K+   +  +
Sbjct: 44  YVMTLLNCLLSAWYGLPFVSPDNILVSTVNGTGAAIEIVYVLIFITLAP-KKEKAKIFCL 102

Query: 533 STIGSLVFCTCFYYMEKNLNVEGKKAVFGYAPVGFSVVLMIPPVLDLR 390
            T   LVF    +     L+   +K   G+A   FS ++   P+  +R
Sbjct: 103 FTFVLLVFSVVIFVSLCALHGNSRKLFCGFAAAIFSAIMYGSPLSIMR 150


>gb|AFK49440.1| unknown [Lotus japonicus]
          Length = 247

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 37/113 (32%), Positives = 59/113 (52%)
 Frame = -3

Query: 713 HFLNMLCYLLLAWYGLPNISDDNVLLSVVNIIRAALEAAVLLFHISKTPSRKDVVDVLTI 534
           + + +L  LL AWYGLP +S DN+L+S VN   AA+E   +L  I+  P +K+   +  +
Sbjct: 44  YVMTLLNCLLSAWYGLPFVSPDNILVSTVNGTGAAIEIVYVLIFITLAP-KKEKAKIFCL 102

Query: 533 STIGSLVFCTCFYYMEKNLNVEGKKAVFGYAPVGFSVVLMIPPVLDLRREMIE 375
            T   LVF    +     L    +K   G+A   FS ++   P L ++R +I+
Sbjct: 103 FTFVLLVFSVVIFVPLCALRGNSRKLFCGFAAAIFSAIMYGSP-LSIKRLVIK 154


Top