BLASTX nr result
ID: Cinnamomum25_contig00025096
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum25_contig00025096 (328 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009404489.1| PREDICTED: pentatricopeptide repeat-containi... 64 5e-08 ref|XP_010276946.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07 ref|XP_010915655.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06 ref|XP_008230331.1| PREDICTED: pentatricopeptide repeat-containi... 57 6e-06 >ref|XP_009404489.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Musa acuminata subsp. malaccensis] Length = 862 Score = 63.5 bits (153), Expect = 5e-08 Identities = 29/51 (56%), Positives = 39/51 (76%) Frame = -3 Query: 155 SLPKPQFQDPTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDL 3 S+ P + PTKHP+ EPLKHRLIRLA++G + A+STLDLM+ +G+ DL Sbjct: 30 SVTSPPPRIPTKHPSLEPLKHRLIRLADAGRVDDAISTLDLMSDRGVPADL 80 >ref|XP_010276946.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Nelumbo nucifera] Length = 856 Score = 60.8 bits (146), Expect = 3e-07 Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 9/75 (12%) Frame = -3 Query: 200 TTQNVPAK---------RPKHSKLSLPKPQFQDPTKHPNFEPLKHRLIRLAESGHLKTAL 48 T VPAK RP K+S + KHP FEPLK+RLIRL G+L AL Sbjct: 4 TCLGVPAKIISPPLTSLRPSRDKISSG-----ESLKHPQFEPLKNRLIRLVNGGNLDGAL 58 Query: 47 STLDLMTQQGIQPDL 3 STL+ MTQ+GIQ DL Sbjct: 59 STLEFMTQKGIQADL 73 >ref|XP_010915655.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Elaeis guineensis] Length = 862 Score = 58.2 bits (139), Expect = 2e-06 Identities = 31/60 (51%), Positives = 39/60 (65%) Frame = -3 Query: 182 AKRPKHSKLSLPKPQFQDPTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDL 3 A RPK + ++ PQ KHP EPLKHR+IRLA+ G L ALS LDLM ++G+ DL Sbjct: 22 ACRPK-TTITTTVPQTPATNKHPALEPLKHRVIRLADRGRLDDALSALDLMDRRGVPADL 80 >ref|XP_008230331.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Prunus mume] Length = 846 Score = 56.6 bits (135), Expect = 6e-06 Identities = 27/55 (49%), Positives = 34/55 (61%) Frame = -3 Query: 167 HSKLSLPKPQFQDPTKHPNFEPLKHRLIRLAESGHLKTALSTLDLMTQQGIQPDL 3 H+ LP P P K PNF+ L +RLI GHL+ A++TLDLM Q+G PDL Sbjct: 9 HAPAKLPLPPSLRPQKSPNFDSLNNRLISHINVGHLRKAITTLDLMAQRGTHPDL 63