BLASTX nr result

ID: Cinnamomum25_contig00023778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00023778
         (732 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010659829.1| PREDICTED: collagen alpha-3(IX) chain [Vitis...    60   3e-11
emb|CAN68739.1| hypothetical protein VITISV_030196 [Vitis vinifera]    60   3e-11
gb|ERN12351.1| hypothetical protein AMTR_s00025p00083640 [Ambore...    54   5e-09
ref|XP_011625828.1| PREDICTED: keratin, type I cytoskeletal 9 [A...    54   5e-09
ref|XP_010255891.1| PREDICTED: keratin, type I cytoskeletal 9 [N...    54   6e-09
ref|XP_010026983.1| PREDICTED: uncharacterized protein LOC104417...    51   5e-08
gb|KCW60837.1| hypothetical protein EUGRSUZ_H03576 [Eucalyptus g...    51   5e-08

>ref|XP_010659829.1| PREDICTED: collagen alpha-3(IX) chain [Vitis vinifera]
          Length = 508

 Score = 60.1 bits (144), Expect(2) = 3e-11
 Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
 Frame = -2

Query: 476 VYSFNLDVEHGKVTVAGNVDPNTCIAMVLK-GRESSAQQSSSKPYKLTME-KVPNVGNLK 303
           VY+  +D + GKVTV+G VDP T I  ++K G+ +        P  L M+ K   + N K
Sbjct: 37  VYTTIIDADQGKVTVSGCVDPATLIKKLVKSGKHAELWGVQRGPNHLNMQFKNMQIDNGK 96

Query: 302 --RVEKIKRARXXXXXXXNCYRRLKVYLKDMKLPQFKDLKLPTKTQKSVKF 156
             +  K ++            +++K  LKDMK+ QFKDLK+P+K QKSVKF
Sbjct: 97  GGKDNKSQKGAQKGGQQPQQMQQMKG-LKDMKMAQFKDLKVPSKDQKSVKF 146



 Score = 35.8 bits (81), Expect(2) = 3e-11
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -3

Query: 544 VLKVYIHCDGCKQKVK 497
           VLKV IHCDGCKQKVK
Sbjct: 13  VLKVNIHCDGCKQKVK 28


>emb|CAN68739.1| hypothetical protein VITISV_030196 [Vitis vinifera]
          Length = 402

 Score = 60.1 bits (144), Expect(2) = 3e-11
 Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
 Frame = -2

Query: 476 VYSFNLDVEHGKVTVAGNVDPNTCIAMVLK-GRESSAQQSSSKPYKLTME-KVPNVGNLK 303
           VY+  +D + GKVTV+G VDP T I  ++K G+ +        P  L M+ K   + N K
Sbjct: 37  VYTTIIDADQGKVTVSGCVDPATLIKKLVKSGKHAELWGVQRGPNHLNMQFKNMQIDNGK 96

Query: 302 --RVEKIKRARXXXXXXXNCYRRLKVYLKDMKLPQFKDLKLPTKTQKSVKF 156
             +  K ++            +++K  LKDMK+ QFKDLK+P+K QKSVKF
Sbjct: 97  GGKDNKSQKGAQKGGQQPQQMQQMKG-LKDMKMAQFKDLKVPSKDQKSVKF 146



 Score = 35.8 bits (81), Expect(2) = 3e-11
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -3

Query: 544 VLKVYIHCDGCKQKVK 497
           VLKV IHCDGCKQKVK
Sbjct: 13  VLKVNIHCDGCKQKVK 28


>gb|ERN12351.1| hypothetical protein AMTR_s00025p00083640 [Amborella trichopoda]
          Length = 540

 Score = 53.9 bits (128), Expect(2) = 5e-09
 Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
 Frame = -2

Query: 476 VYSFNLDVEHGKVTVAGNVDPNTCIAMVLKGRESS------AQQSSSKPYKLTMEKVPNV 315
           VY+ ++D+E  KVTV+GNVDP+  I  ++K  + +        Q  ++  KL +EK  + 
Sbjct: 68  VYTTSIDMEQQKVTVSGNVDPSALIKKLVKNGKHAELWNQRGNQLDNQFQKLQIEKGKDQ 127

Query: 314 GNLKRVEKIKRARXXXXXXXNCYRRLKVYLKDMK-LPQFKDLKLPTKTQKSVKF 156
            + K  +K  + +          +      KDMK  PQFKDLKLP K  KSVKF
Sbjct: 128 KDGKNQQKGGKDQKPQQPKQEQIKG----PKDMKQQPQFKDLKLPFKVPKSVKF 177



 Score = 34.3 bits (77), Expect(2) = 5e-09
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 544 VLKVYIHCDGCKQKVK 497
           VLKV IHC+GCKQKVK
Sbjct: 44  VLKVNIHCEGCKQKVK 59


>ref|XP_011625828.1| PREDICTED: keratin, type I cytoskeletal 9 [Amborella trichopoda]
          Length = 504

 Score = 53.9 bits (128), Expect(2) = 5e-09
 Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
 Frame = -2

Query: 476 VYSFNLDVEHGKVTVAGNVDPNTCIAMVLKGRESS------AQQSSSKPYKLTMEKVPNV 315
           VY+ ++D+E  KVTV+GNVDP+  I  ++K  + +        Q  ++  KL +EK  + 
Sbjct: 46  VYTTSIDMEQQKVTVSGNVDPSALIKKLVKNGKHAELWNQRGNQLDNQFQKLQIEKGKDQ 105

Query: 314 GNLKRVEKIKRARXXXXXXXNCYRRLKVYLKDMK-LPQFKDLKLPTKTQKSVKF 156
            + K  +K  + +          +      KDMK  PQFKDLKLP K  KSVKF
Sbjct: 106 KDGKNQQKGGKDQKPQQPKQEQIKG----PKDMKQQPQFKDLKLPFKVPKSVKF 155



 Score = 34.3 bits (77), Expect(2) = 5e-09
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 544 VLKVYIHCDGCKQKVK 497
           VLKV IHC+GCKQKVK
Sbjct: 22  VLKVNIHCEGCKQKVK 37


>ref|XP_010255891.1| PREDICTED: keratin, type I cytoskeletal 9 [Nelumbo nucifera]
          Length = 483

 Score = 53.5 bits (127), Expect(2) = 6e-09
 Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
 Frame = -2

Query: 476 VYSFNLDVEHGKVTVAGNVDPNTCIAMVLKGRESSAQQSSSKPYKLTMEKVPNVGNLKRV 297
           VY+  +D E GKVTV+GNVDP T I  + K  + +    + K       ++ N     ++
Sbjct: 37  VYTTTIDAEQGKVTVSGNVDPATLIKKLAKSGKHAELWGAPKASNNNQNQLNNQFKNMQI 96

Query: 296 E----------------KIKRARXXXXXXXNCYRRLKVY--LKDMKLP-QFKDLKLPTKT 174
           E                + K  +          ++L+    LKD+KLP QFKDLK+P K 
Sbjct: 97  ENGKGGKDNKNQKGGKDQQKGGQQPQQQQQQLLQQLQQMKGLKDLKLPQQFKDLKIPFKD 156

Query: 173 QKSVKF 156
            KSVKF
Sbjct: 157 PKSVKF 162



 Score = 34.3 bits (77), Expect(2) = 6e-09
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 544 VLKVYIHCDGCKQKVK 497
           VLKV IHCDGCK+KVK
Sbjct: 13  VLKVNIHCDGCKRKVK 28


>ref|XP_010026983.1| PREDICTED: uncharacterized protein LOC104417396 [Eucalyptus
           grandis]
          Length = 548

 Score = 50.8 bits (120), Expect(2) = 5e-08
 Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 23/123 (18%)
 Frame = -2

Query: 476 VYSFNLDVEHGKVTVAGNVDPNTCIAMVLKGRESS----AQQSSSKPYKLTME------- 330
           VY+  +D E GKVTV+GNVDP   I  ++K  + +    AQ+S+ +   + ++       
Sbjct: 143 VYTIKIDAEQGKVTVSGNVDPAPLIKKLMKSGKHAELWGAQKSNDQLKNMRIDNGKGGNK 202

Query: 329 -----------KVPNVG-NLKRVEKIKRARXXXXXXXNCYRRLKVYLKDMKLPQFKDLKL 186
                        P VG NL   ++++             +++K + +D+KLPQFKDLK+
Sbjct: 203 GQKGGGGVEGNNQPKVGQNLPNQQQLQHLNQQQLQQ---LQQMKAF-QDLKLPQFKDLKM 258

Query: 185 PTK 177
           P+K
Sbjct: 259 PSK 261



 Score = 33.9 bits (76), Expect(2) = 5e-08
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 544 VLKVYIHCDGCKQKVK 497
           VLKV IHC+GCKQKVK
Sbjct: 119 VLKVNIHCNGCKQKVK 134


>gb|KCW60837.1| hypothetical protein EUGRSUZ_H03576 [Eucalyptus grandis]
          Length = 434

 Score = 50.8 bits (120), Expect(2) = 5e-08
 Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 23/123 (18%)
 Frame = -2

Query: 476 VYSFNLDVEHGKVTVAGNVDPNTCIAMVLKGRESS----AQQSSSKPYKLTME------- 330
           VY+  +D E GKVTV+GNVDP   I  ++K  + +    AQ+S+ +   + ++       
Sbjct: 29  VYTIKIDAEQGKVTVSGNVDPAPLIKKLMKSGKHAELWGAQKSNDQLKNMRIDNGKGGNK 88

Query: 329 -----------KVPNVG-NLKRVEKIKRARXXXXXXXNCYRRLKVYLKDMKLPQFKDLKL 186
                        P VG NL   ++++             +++K + +D+KLPQFKDLK+
Sbjct: 89  GQKGGGGVEGNNQPKVGQNLPNQQQLQHLNQQQLQQ---LQQMKAF-QDLKLPQFKDLKM 144

Query: 185 PTK 177
           P+K
Sbjct: 145 PSK 147



 Score = 33.9 bits (76), Expect(2) = 5e-08
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 544 VLKVYIHCDGCKQKVK 497
           VLKV IHC+GCKQKVK
Sbjct: 5   VLKVNIHCNGCKQKVK 20


Top