BLASTX nr result

ID: Cinnamomum25_contig00023600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00023600
         (349 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008797512.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...    70   4e-10
ref|XP_010936951.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...    65   2e-08
ref|XP_010936950.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...    65   2e-08
ref|XP_011625302.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...    62   1e-07
gb|ERN11213.1| hypothetical protein AMTR_s00024p00219730 [Ambore...    62   1e-07

>ref|XP_008797512.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Phoenix
           dactylifera]
          Length = 709

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 47/98 (47%), Positives = 58/98 (59%)
 Frame = -3

Query: 347 PLSRSEFMELQDKERKRKFLNENPDRGQTYDADDYSSEGCHYNEPQRRSSDRKLHSDKGE 168
           PLS +EFM LQD ERK K LNE  +R   YDA    SE   YNE +RRS +RK + DK  
Sbjct: 559 PLSHAEFMNLQDGERKPKLLNECRERELDYDA---ISEDNRYNEARRRSHERKHYLDKEP 615

Query: 167 FKNHSDNDESWRPQMKQSRNLRSGSHSHQRSDFDSDEE 54
            ++ SD+D S R   K     +  S SH+R  F+SDEE
Sbjct: 616 IRSCSDSD-SQRIHKKDPLE-KHHSPSHRRPGFNSDEE 651


>ref|XP_010936951.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like isoform X2
           [Elaeis guineensis]
          Length = 819

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 48/111 (43%), Positives = 61/111 (54%)
 Frame = -3

Query: 347 PLSRSEFMELQDKERKRKFLNENPDRGQTYDADDYSSEGCHYNEPQRRSSDRKLHSDKGE 168
           P SR+EFM+LQD E K K LNE  +R   YDA    SE    NE +RRS +RK + DK  
Sbjct: 558 PFSRAEFMKLQDGELKHKLLNECRERELDYDA---VSEDNRDNEARRRSHERKHYLDKEP 614

Query: 167 FKNHSDNDESWRPQMKQSRNLRSGSHSHQRSDFDSDEEDVRSIGRKYVKDC 15
            K  SD+ E+ R   K S   +  S S +R  F SDEE + S   K+ + C
Sbjct: 615 IKTCSDS-ENQRMDKKNSLE-KHHSPSRRRPGFTSDEE-IYSADLKHKESC 662


>ref|XP_010936950.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like isoform X1
           [Elaeis guineensis]
          Length = 820

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 48/111 (43%), Positives = 61/111 (54%)
 Frame = -3

Query: 347 PLSRSEFMELQDKERKRKFLNENPDRGQTYDADDYSSEGCHYNEPQRRSSDRKLHSDKGE 168
           P SR+EFM+LQD E K K LNE  +R   YDA    SE    NE +RRS +RK + DK  
Sbjct: 559 PFSRAEFMKLQDGELKHKLLNECRERELDYDA---VSEDNRDNEARRRSHERKHYLDKEP 615

Query: 167 FKNHSDNDESWRPQMKQSRNLRSGSHSHQRSDFDSDEEDVRSIGRKYVKDC 15
            K  SD+ E+ R   K S   +  S S +R  F SDEE + S   K+ + C
Sbjct: 616 IKTCSDS-ENQRMDKKNSLE-KHHSPSRRRPGFTSDEE-IYSADLKHKESC 663


>ref|XP_011625302.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6 [Amborella trichopoda]
          Length = 850

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
 Frame = -3

Query: 347 PLSRSEFMELQDKERKRKFLNENPDRGQTYDADD-YSSEGCHYNEPQRRSSDRKLHS-DK 174
           PLSR EFMELQ  ER+RK  NE P   + +  DD   S    Y++  R+S DRK H  D+
Sbjct: 594 PLSRVEFMELQGSERRRKLWNEQPQSRELHAQDDAVESSERRYSDAPRKSQDRKPHDVDR 653

Query: 173 GEFKNHSDNDESWRPQMKQSRNLRSGSHSHQRSDFDSDEEDVRS 42
              +N+S+  +  RP  K          +H+   F SD++ + S
Sbjct: 654 DSVRNYSEESDIQRPISK----------NHREKYFSSDDDGIFS 687


>gb|ERN11213.1| hypothetical protein AMTR_s00024p00219730 [Amborella trichopoda]
          Length = 873

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
 Frame = -3

Query: 347 PLSRSEFMELQDKERKRKFLNENPDRGQTYDADD-YSSEGCHYNEPQRRSSDRKLHS-DK 174
           PLSR EFMELQ  ER+RK  NE P   + +  DD   S    Y++  R+S DRK H  D+
Sbjct: 594 PLSRVEFMELQGSERRRKLWNEQPQSRELHAQDDAVESSERRYSDAPRKSQDRKPHDVDR 653

Query: 173 GEFKNHSDNDESWRPQMKQSRNLRSGSHSHQRSDFDSDEEDVRS 42
              +N+S+  +  RP  K          +H+   F SD++ + S
Sbjct: 654 DSVRNYSEESDIQRPISK----------NHREKYFSSDDDGIFS 687


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