BLASTX nr result
ID: Cinnamomum25_contig00023570
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00023570
(238 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012072306.1| PREDICTED: cleavage and polyadenylation spec... 100 6e-19
ref|XP_009391419.1| PREDICTED: cleavage and polyadenylation spec... 100 6e-19
ref|XP_010238147.1| PREDICTED: cleavage and polyadenylation spec... 98 2e-18
gb|EMS55526.1| Cleavage and polyadenylation specificity factor s... 98 2e-18
ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation spec... 98 2e-18
ref|XP_009608302.1| PREDICTED: cleavage and polyadenylation spec... 97 3e-18
ref|XP_006661200.1| PREDICTED: cleavage and polyadenylation spec... 97 3e-18
gb|EMT26357.1| Integrator complex subunit 11 [Aegilops tauschii] 97 3e-18
ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group] g... 97 3e-18
ref|XP_011098509.1| PREDICTED: cleavage and polyadenylation spec... 97 5e-18
ref|XP_011098501.1| PREDICTED: cleavage and polyadenylation spec... 97 5e-18
ref|XP_010066571.1| PREDICTED: cleavage and polyadenylation spec... 97 5e-18
ref|XP_009765931.1| PREDICTED: cleavage and polyadenylation spec... 97 5e-18
ref|XP_009608301.1| PREDICTED: cleavage and polyadenylation spec... 97 5e-18
gb|KCW64496.1| hypothetical protein EUGRSUZ_G02104 [Eucalyptus g... 97 5e-18
emb|CDP16291.1| unnamed protein product [Coffea canephora] 96 9e-18
ref|XP_010271360.1| PREDICTED: cleavage and polyadenylation spec... 96 1e-17
gb|KFK33395.1| hypothetical protein AALP_AA5G007400 [Arabis alpina] 96 1e-17
ref|XP_011463169.1| PREDICTED: cleavage and polyadenylation spec... 95 2e-17
ref|XP_010651729.1| PREDICTED: cleavage and polyadenylation spec... 95 2e-17
>ref|XP_012072306.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Jatropha curcas]
Length = 658
Score = 99.8 bits (247), Expect = 6e-19
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +2
Query: 62 GKTEREVVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
G + +++ LDHI ALPYFT+VCGYHGPIYMTYPT+ALAPLMLEDYRKVMVDRRGE
Sbjct: 58 GALDCVIITHFHLDHIGALPYFTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDRRGE 116
>ref|XP_009391419.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Musa acuminata subsp. malaccensis]
Length = 663
Score = 99.8 bits (247), Expect = 6e-19
Identities = 47/71 (66%), Positives = 56/71 (78%), Gaps = 4/71 (5%)
Frame = +2
Query: 38 DCPIVNTTGKTERE----VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLED 205
D +++ TG + V++ LDH+ ALPYFT+VCGYHGPIYMTYPT+ALAPLMLED
Sbjct: 46 DFSLISKTGDFDSALTCVVITHFHLDHVGALPYFTEVCGYHGPIYMTYPTKALAPLMLED 105
Query: 206 YRKVMVDRRGE 238
YRKVMVDRRGE
Sbjct: 106 YRKVMVDRRGE 116
>ref|XP_010238147.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Brachypodium distachyon]
gi|721679882|ref|XP_010238148.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 3-II isoform
X1 [Brachypodium distachyon]
gi|721679885|ref|XP_010238149.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 3-II isoform
X1 [Brachypodium distachyon]
Length = 574
Score = 97.8 bits (242), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+++ LDHI ALPYFT+VCGYHGPIYMTYPT+ALAPLMLEDYRKVMVD+RGE
Sbjct: 68 IITHFHLDHIGALPYFTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDQRGE 120
>gb|EMS55526.1| Cleavage and polyadenylation specificity factor subunit 3-II
[Triticum urartu]
Length = 540
Score = 97.8 bits (242), Expect = 2e-18
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
V++ LDHI ALPYFT+VCGYHGPIYMTYPT+ALAPLMLEDYRKVMVD RGE
Sbjct: 67 VITHFHLDHIGALPYFTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDHRGE 119
>ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Brachypodium distachyon]
Length = 553
Score = 97.8 bits (242), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+++ LDHI ALPYFT+VCGYHGPIYMTYPT+ALAPLMLEDYRKVMVD+RGE
Sbjct: 68 IITHFHLDHIGALPYFTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDQRGE 120
>ref|XP_009608302.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Nicotiana tomentosiformis]
Length = 606
Score = 97.4 bits (241), Expect = 3e-18
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +2
Query: 83 VSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+ +S LDHI ALPYFT+VCGY+GPIYMTYPT+ALAPLMLEDYRKVMVDRRGE
Sbjct: 22 ILTSHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGE 73
>ref|XP_006661200.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Oryza brachyantha]
Length = 545
Score = 97.4 bits (241), Expect = 3e-18
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
V++ LDHI ALPYFT+VCGYHGP+YMTYPT+ALAPLMLEDYRKVMVD RGE
Sbjct: 66 VITHFHLDHIGALPYFTEVCGYHGPVYMTYPTKALAPLMLEDYRKVMVDHRGE 118
>gb|EMT26357.1| Integrator complex subunit 11 [Aegilops tauschii]
Length = 465
Score = 97.4 bits (241), Expect = 3e-18
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +2
Query: 92 SDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
S LDHI ALPYFT+VCGYHGPIYMTYPT+ALAPLMLEDYRKVMVD RGE
Sbjct: 37 SHLDHIGALPYFTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDHRGE 85
>ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group]
gi|50252615|dbj|BAD28786.1| putative FEG protein [Oryza
sativa Japonica Group] gi|113631340|dbj|BAF25021.1|
Os09g0397900 [Oryza sativa Japonica Group]
gi|218202115|gb|EEC84542.1| hypothetical protein
OsI_31281 [Oryza sativa Indica Group]
gi|222641522|gb|EEE69654.1| hypothetical protein
OsJ_29268 [Oryza sativa Japonica Group]
Length = 559
Score = 97.4 bits (241), Expect = 3e-18
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
V++ LDHI ALPYFT+VCGYHGP+YMTYPT+ALAPLMLEDYRKVMVD RGE
Sbjct: 67 VITHFHLDHIGALPYFTEVCGYHGPVYMTYPTKALAPLMLEDYRKVMVDHRGE 119
>ref|XP_011098509.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Sesamum indicum]
Length = 640
Score = 96.7 bits (239), Expect = 5e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+++ LDHI ALPYFT+VCGY+GPIYMTYPT+ALAPLMLEDYRKVMVDRRGE
Sbjct: 64 IITHFHLDHIGALPYFTQVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGE 116
>ref|XP_011098501.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Sesamum indicum]
Length = 644
Score = 96.7 bits (239), Expect = 5e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+++ LDHI ALPYFT+VCGY+GPIYMTYPT+ALAPLMLEDYRKVMVDRRGE
Sbjct: 64 IITHFHLDHIGALPYFTQVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGE 116
>ref|XP_010066571.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Eucalyptus grandis]
Length = 975
Score = 96.7 bits (239), Expect = 5e-18
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +2
Query: 59 TGKTEREVVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
TG + V++ LDH+ ALPYFT+VCGY GPIYMTYPT+ALAPLMLEDYRKVMV+RRGE
Sbjct: 57 TGALDCIVITHFHLDHVGALPYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKVMVERRGE 116
>ref|XP_009765931.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Nicotiana sylvestris]
Length = 938
Score = 96.7 bits (239), Expect = 5e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+++ LDHI ALPYFT+VCGY+GPIYMTYPT+ALAPLMLEDYRKVMVDRRGE
Sbjct: 64 IITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGE 116
>ref|XP_009608301.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Nicotiana tomentosiformis]
Length = 649
Score = 96.7 bits (239), Expect = 5e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+++ LDHI ALPYFT+VCGY+GPIYMTYPT+ALAPLMLEDYRKVMVDRRGE
Sbjct: 64 IITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGE 116
>gb|KCW64496.1| hypothetical protein EUGRSUZ_G02104 [Eucalyptus grandis]
Length = 649
Score = 96.7 bits (239), Expect = 5e-18
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +2
Query: 59 TGKTEREVVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
TG + V++ LDH+ ALPYFT+VCGY GPIYMTYPT+ALAPLMLEDYRKVMV+RRGE
Sbjct: 57 TGALDCIVITHFHLDHVGALPYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKVMVERRGE 116
>emb|CDP16291.1| unnamed protein product [Coffea canephora]
Length = 647
Score = 95.9 bits (237), Expect = 9e-18
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+++ LDHI ALPYFT+VCGY GPIYMTYPT+ALAPLMLEDYRKVMVDRRGE
Sbjct: 66 IITHFHLDHIGALPYFTEVCGYKGPIYMTYPTKALAPLMLEDYRKVMVDRRGE 118
>ref|XP_010271360.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Nelumbo nucifera]
Length = 694
Score = 95.5 bits (236), Expect = 1e-17
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
+++ LDH+ ALPYFT+VCGY GP+YMTYPT+ALAPLMLEDYRKVMVDRRGE
Sbjct: 64 IITHFHLDHVGALPYFTEVCGYRGPVYMTYPTKALAPLMLEDYRKVMVDRRGE 116
>gb|KFK33395.1| hypothetical protein AALP_AA5G007400 [Arabis alpina]
Length = 580
Score = 95.5 bits (236), Expect = 1e-17
Identities = 44/81 (54%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Frame = +2
Query: 8 CVSLIFSSTKDCPIVNTTGKTERE----VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPT 175
C+ L D +++ TG ++E +++ +DH+ ALPYFT+VCGY+GPIYM+YPT
Sbjct: 5 CLILGAGQEIDFSLLSKTGDFDKELSCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPT 64
Query: 176 RALAPLMLEDYRKVMVDRRGE 238
+AL+PLMLEDYR+VMVDRRGE
Sbjct: 65 KALSPLMLEDYRRVMVDRRGE 85
>ref|XP_011463169.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Fragaria vesca subsp. vesca]
Length = 636
Score = 95.1 bits (235), Expect = 2e-17
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
V++ LDHI ALPYFT+VCGY+GPIYMTYPT+ALAPLMLEDYRK+MV+RRGE
Sbjct: 59 VITHFHLDHIGALPYFTQVCGYNGPIYMTYPTKALAPLMLEDYRKIMVERRGE 111
>ref|XP_010651729.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Vitis vinifera]
Length = 649
Score = 94.7 bits (234), Expect = 2e-17
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +2
Query: 80 VVSSSDLDHIEALPYFTKVCGYHGPIYMTYPTRALAPLMLEDYRKVMVDRRGE 238
V++ LDH+ ALPYFT+VCGY GPIYMTYPT+AL+PLMLEDYRKVMVDRRGE
Sbjct: 64 VITHFHLDHVGALPYFTEVCGYSGPIYMTYPTKALSPLMLEDYRKVMVDRRGE 116