BLASTX nr result
ID: Cinnamomum25_contig00023533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00023533
(672 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatula] 180 4e-74
ref|XP_003590535.1| 30S ribosomal protein S11 [Medicago truncatu... 164 1e-58
ref|NP_862785.1| RNA polymerase alpha subunit [Calycanthus flori... 198 3e-48
ref|YP_009093981.1| RNA polymerase alpha subunit (chloroplast) [... 197 6e-48
ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]... 197 6e-48
ref|YP_009114901.1| RNA polymerase alpha subunit [Thalictrum cor... 196 1e-47
ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis ... 196 1e-47
ref|YP_001671715.1| RNA polymerase alpha subunit [Carica papaya]... 194 3e-47
ref|YP_009092335.1| RNA polymerase alpha subunit (chloroplast) [... 194 4e-47
gb|ADD31217.1| RNA polymerase alpha subunit protein (chloroplast... 194 4e-47
ref|YP_009048319.1| DNA-directed RNA polymerase alpha chain (chl... 194 4e-47
ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [... 194 4e-47
gb|AEX98283.1| RNA polymerase alpha subunit (chloroplast) [Magno... 194 4e-47
ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata] gi|34... 194 4e-47
ref|YP_004769746.1| RNA polymerase alpha subunit [Magnolia kwang... 194 4e-47
gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus] 193 8e-47
ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus mac... 193 8e-47
gb|ADD31230.1| RNA polymerase alpha subunit protein (chloroplast... 192 1e-46
ref|YP_008963723.1| RNA polymerase alpha subunit (chloroplast) [... 192 1e-46
gb|AEX94404.1| RNA polymerase alpha subunit (chloroplast) [Erios... 192 1e-46
>ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatula]
Length = 466
Score = 180 bits (457), Expect(2) = 4e-74
Identities = 87/103 (84%), Positives = 96/103 (93%)
Frame = +1
Query: 364 REEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGTCI 543
R++V VS RTLQWKCVESR DSKRLYYGRF+LSPL KGQADTIGIAMR+ LLGEIEGTCI
Sbjct: 136 RQKVKVSARTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGTCI 195
Query: 544 TRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
TRAKSEK+ HEYSTIVGI+ES++EILMNLKEIVL+ NLYGTRD
Sbjct: 196 TRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRD 238
Score = 125 bits (314), Expect(2) = 4e-74
Identities = 63/87 (72%), Positives = 68/87 (78%)
Frame = +2
Query: 2 TDVIGRVVSWSSAXXXXXXXXXXXXPFAAQTAAGNAIRKAVDQGLQRAEVMIKGPGLGRD 181
TDV GRV+SWSSA PFAAQTAA NAIR VDQG+QRA V+IKGPGLGRD
Sbjct: 44 TDVRGRVISWSSAGSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRD 103
Query: 182 AALRAIRRSGILLSFVRDVTPMPHNGC 262
AALRAI RSGILL F+RDVTP+PHNGC
Sbjct: 104 AALRAIARSGILLRFIRDVTPIPHNGC 130
>ref|XP_003590535.1| 30S ribosomal protein S11 [Medicago truncatula]
gi|355479583|gb|AES60786.1| DNA-directed RNA polymerase
subunit alpha [Medicago truncatula]
Length = 233
Score = 164 bits (416), Expect(2) = 1e-58
Identities = 79/103 (76%), Positives = 91/103 (88%)
Frame = +1
Query: 364 REEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGTCI 543
R++V VSTRTLQWKCVESR DSK LYYGRF+L+PL K QA IGIAMR+ L GEIEGTCI
Sbjct: 71 RQKVKVSTRTLQWKCVESRVDSKCLYYGRFILTPLRKDQAHIIGIAMRRILFGEIEGTCI 130
Query: 544 TRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
TRAKSEK+ HEYSTI+GI+ES++EILMNLKE +L+ NLYGTRD
Sbjct: 131 TRAKSEKIPHEYSTILGIQESIHEILMNLKENILKSNLYGTRD 173
Score = 89.7 bits (221), Expect(2) = 1e-58
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +2
Query: 122 VDQGLQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGC 262
+DQG+QRAEV+IKGPGLGRDAALRAIRRSGILL F+ DVTPMPHNGC
Sbjct: 19 IDQGMQRAEVIIKGPGLGRDAALRAIRRSGILLRFIGDVTPMPHNGC 65
>ref|NP_862785.1| RNA polymerase alpha subunit [Calycanthus floridus var. glaucus]
gi|41688654|sp|Q7YJU6.1|RPOA_CALFG RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
(chloroplast) [Calycanthus floridus var. glaucus]
gi|32399410|emb|CAD28752.1| RNA polymerase alpha subunit
[Calycanthus floridus var. glaucus]
Length = 340
Score = 198 bits (503), Expect = 3e-48
Identities = 100/105 (95%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREEVAVSTRTLQWKCVESRTDS RLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLQWKCVESRTDSNRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEKV HEYSTIVGIEESV+EILMNLKEIVL+ NLYGTRD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILMNLKEIVLKSNLYGTRD 105
>ref|YP_009093981.1| RNA polymerase alpha subunit (chloroplast) [Nelumbo nucifera]
gi|224474255|gb|ACN49441.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
gi|290489668|gb|ADD31218.1| RNA polymerase alpha subunit
protein (chloroplast) [Nelumbo nucifera]
gi|383286829|gb|AFH01479.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
gi|519666943|gb|AGO98555.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
gi|725824076|gb|AIY33855.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
Length = 339
Score = 197 bits (500), Expect = 6e-48
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREE+AVSTRTLQWKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEIAVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGIEESV+EILMNLKEIVLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRD 105
>ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]
gi|224474167|gb|ACN49356.1| RNA polymerase alpha subunit
[Nelumbo lutea] gi|383286921|gb|AFH01570.1| RNA
polymerase alpha subunit (chloroplast) [Nelumbo lutea]
Length = 339
Score = 197 bits (500), Expect = 6e-48
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREE+AVSTRTLQWKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEIAVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGIEESV+EILMNLKEIVLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRD 105
>ref|YP_009114901.1| RNA polymerase alpha subunit [Thalictrum coreanum]
gi|721136338|gb|AIX03549.1| RNA polymerase alpha subunit
[Thalictrum coreanum]
Length = 337
Score = 196 bits (498), Expect = 1e-47
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
M+REEVAVSTRTLQWKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGIEESV+EILMNLKEIVLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRD 105
>ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis saniculifolia]
gi|226933914|gb|ACO92047.1| RNA polymerase alpha subunit
[Megaleranthis saniculifolia]
Length = 328
Score = 196 bits (498), Expect = 1e-47
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
M+REEVAVSTRTLQWKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGIEESV+EILMNLKEIVLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRD 105
>ref|YP_001671715.1| RNA polymerase alpha subunit [Carica papaya]
gi|166344165|gb|ABY86815.1| RNA polymerase alpha chain
[Carica papaya]
Length = 327
Score = 194 bits (494), Expect = 3e-47
Identities = 96/105 (91%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVRE+V VSTRTLQWKCVESRTDSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGI+ESV+EILMNLKEIVLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRD 105
>ref|YP_009092335.1| RNA polymerase alpha subunit (chloroplast) [Macadamia integrifolia]
gi|563321861|gb|AHB38190.1| RNA polymerase alpha subunit
(chloroplast) [Macadamia integrifolia]
Length = 328
Score = 194 bits (493), Expect = 4e-47
Identities = 96/105 (91%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREEVAVSTRTL+WKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLEWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGIEESV+EILMNLKEIVLR NLYGTR+
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRN 105
>gb|ADD31217.1| RNA polymerase alpha subunit protein (chloroplast) [Meliosma aff.
cuneifolia Moore 333]
Length = 337
Score = 194 bits (493), Expect = 4e-47
Identities = 96/105 (91%), Positives = 101/105 (96%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREEVAVSTRTLQWKCVESR DSKRLYYGRF++SPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLQWKCVESRADSKRLYYGRFIMSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSE + HEYSTIVGIEESV+EILMNLKEIVLR NLYGTRD
Sbjct: 61 CITRAKSETIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRD 105
>ref|YP_009048319.1| DNA-directed RNA polymerase alpha chain (chloroplast) [Magnolia
yunnanensis] gi|573015534|gb|AHF72112.1| DNA-directed
RNA polymerase alpha chain (chloroplast) [Magnolia
yunnanensis]
Length = 337
Score = 194 bits (493), Expect = 4e-47
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREEVAVSTRTLQWKCVESRTDSKRLYYGRF+L+PLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEKV HEYSTIVGIEESV+ ILMNLKEIVLR +LYGTRD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRD 105
>ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [Magnolia officinalis]
gi|452848803|ref|YP_007474484.1| RNA polymerase alpha
subunit (chloroplast) [Magnolia officinalis subsp.
biloba] gi|619275767|ref|YP_009026913.1| RNA polymerase
alpha subunit (plastid) [Magnolia tripetala]
gi|372862453|gb|AEX98534.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis]
gi|372862536|gb|AEX98616.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862621|gb|AEX98700.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862706|gb|AEX98784.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|608608435|gb|AHW51989.1| RNA polymerase alpha subunit
[Magnolia tripetala]
Length = 337
Score = 194 bits (493), Expect = 4e-47
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREEVAVSTRTLQWKCVESRTDSKRLYYGRF+L+PLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEKV HEYSTIVGIEESV+ ILMNLKEIVLR +LYGTRD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRD 105
>gb|AEX98283.1| RNA polymerase alpha subunit (chloroplast) [Magnolia liliiflora]
Length = 337
Score = 194 bits (493), Expect = 4e-47
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREEVAVSTRTLQWKCVESRTDSKRLYYGRF+L+PLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEKV HEYSTIVGIEESV+ ILMNLKEIVLR +LYGTRD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRD 105
>ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata] gi|343887570|gb|AEM65249.1|
RpoA [Magnolia denudata] gi|372862283|gb|AEX98366.1| RNA
polymerase alpha subunit (chloroplast) [Magnolia
denudata]
Length = 337
Score = 194 bits (493), Expect = 4e-47
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREEVAVSTRTLQWKCVESRTDSKRLYYGRF+L+PLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEKV HEYSTIVGIEESV+ ILMNLKEIVLR +LYGTRD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRD 105
>ref|YP_004769746.1| RNA polymerase alpha subunit [Magnolia kwangsiensis]
gi|302424212|gb|ADL39088.1| RNA polymerase alpha subunit
[Magnolia kwangsiensis]
Length = 337
Score = 194 bits (493), Expect = 4e-47
Identities = 97/105 (92%), Positives = 102/105 (97%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREEVAVSTRTLQWKCVESRTDSKRLYYGRF+L+PLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEKV HEYSTIVGIEESV+ ILMNLKEIVLR +LYGTRD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHAILMNLKEIVLRSHLYGTRD 105
>gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus]
Length = 339
Score = 193 bits (490), Expect = 8e-47
Identities = 95/105 (90%), Positives = 101/105 (96%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
M+R+EVAVS RTLQWKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MLRDEVAVSARTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGIEESV+EILMNLKEIVLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRD 105
>ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus macranthus]
gi|158514028|sp|A1XGS0.1|RPOA_RANMC RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
(chloroplast) [Ranunculus macranthus]
gi|85540836|gb|ABC70788.1| RNA polymerase alpha subunit
[Ranunculus macranthus]
Length = 346
Score = 193 bits (490), Expect = 8e-47
Identities = 95/105 (90%), Positives = 101/105 (96%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
M+R+EVAVS RTLQWKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MLRDEVAVSARTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGIEESV+EILMNLKEIVLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRD 105
>gb|ADD31230.1| RNA polymerase alpha subunit protein (chloroplast) [Liquidambar
styraciflua]
Length = 338
Score = 192 bits (489), Expect = 1e-46
Identities = 94/105 (89%), Positives = 101/105 (96%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVRE+V VSTRTLQWKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGI+ESV+EILMNLKE+VLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTRD 105
>ref|YP_008963723.1| RNA polymerase alpha subunit (chloroplast) [Liquidambar formosana]
gi|491650402|gb|AGL13462.1| RNA polymerase alpha subunit
(chloroplast) [Liquidambar formosana]
Length = 337
Score = 192 bits (489), Expect = 1e-46
Identities = 94/105 (89%), Positives = 101/105 (96%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVRE+V VSTRTLQWKCVESR DSKRLYYGRF+LSPLMKGQADTIGIAMR+ALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEK+ HEYSTIVGI+ESV+EILMNLKE+VLR NLYGTRD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTRD 105
>gb|AEX94404.1| RNA polymerase alpha subunit (chloroplast) [Eriospermum cervicorne]
Length = 339
Score = 192 bits (489), Expect = 1e-46
Identities = 97/105 (92%), Positives = 100/105 (95%)
Frame = +1
Query: 358 MVREEVAVSTRTLQWKCVESRTDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 537
MVREE+A STRTLQWKCVESR DSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRKALLGEIEGT 60
Query: 538 CITRAKSEKVSHEYSTIVGIEESVYEILMNLKEIVLRRNLYGTRD 672
CITRAKSEKV HEYSTIVGIEESV+EIL+NLKEIVLR NLYG RD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRD 105