BLASTX nr result
ID: Cinnamomum25_contig00023293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00023293
(541 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 269 5e-70
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 260 2e-67
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 254 2e-65
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 253 4e-65
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 246 5e-63
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 243 5e-62
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 241 2e-61
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 240 2e-61
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 240 3e-61
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 239 7e-61
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 239 7e-61
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 239 7e-61
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 238 9e-61
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 238 1e-60
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 238 1e-60
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 238 1e-60
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 238 1e-60
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 236 6e-60
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 235 7e-60
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 235 1e-59
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 269 bits (688), Expect = 5e-70
Identities = 129/179 (72%), Positives = 151/179 (84%)
Frame = -3
Query: 539 ARWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKG 360
A+W+VAM EE+ES KNQT ELV+ P+G+K+VGCKWVFK+KEGT E R+KARLVAKG
Sbjct: 917 AKWLVAMSEEMESLHKNQTWELVRIPQGRKVVGCKWVFKRKEGTSEGESVRYKARLVAKG 976
Query: 359 YTQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPE 180
++QREGVD+NE+FSPVV+H+SIRVLLAMVA +LELEQLDVKTAFLHGEL+E I M QPE
Sbjct: 977 FSQREGVDYNEIFSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELEEDILMSQPE 1036
Query: 179 GFEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
GF + GKE C LKKSLYGLKQSPRQWYKRFD+FMV +G+ RS YD CVYH K +GS
Sbjct: 1037 GFVVPGKEKFACSLKKSLYGLKQSPRQWYKRFDSFMVEHGFDRSPYDCCVYHSKVEDGS 1095
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 260 bits (665), Expect = 2e-67
Identities = 121/178 (67%), Positives = 150/178 (84%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
+W AMG+E+ES KNQT +LV P G+KI+ CKWVFKKKEG E ++KAR+VA+G+
Sbjct: 805 KWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGF 864
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
QREGVD+NE+FSPVV+H+SIRVLLA+VA NLELEQLDVKTAFLHGEL+E+IYM QP+G
Sbjct: 865 NQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDG 924
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
F++ GKE+HVC LKKSLYGLKQSPRQWYKRFD++MV GY RS+YD CVY+ + ++ S
Sbjct: 925 FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDS 982
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 254 bits (648), Expect = 2e-65
Identities = 122/178 (68%), Positives = 144/178 (80%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
+W+ AM EE ES KN T +LV PKG K+VGCKWVFKKK G P VE RFKA LVAK Y
Sbjct: 472 KWMTAMQEEFESLLKNGTWQLVDKPKGCKVVGCKWVFKKKLGIPHVEPERFKATLVAKAY 531
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
TQREG+DFNE+FSP+VKH+SIRVLLA+V+ NLEL Q+DV AFLHGEL+E+I+M QP+G
Sbjct: 532 TQREGMDFNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELEEEIFMQQPKG 591
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
F + GKE+ VCLLK+SLYGLKQSPRQWYKRFD FM GY RS +D+CVY +K +NGS
Sbjct: 592 FIVKGKENQVCLLKRSLYGLKQSPRQWYKRFDKFMTSVGYSRSKFDNCVYMRKLTNGS 649
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 253 bits (645), Expect = 4e-65
Identities = 118/170 (69%), Positives = 141/170 (82%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
+W+ AM +E+ES +NQT L+ P ++++ CKW+FK+ EG P VE ++KARLVA+G+
Sbjct: 828 KWLEAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPKYKARLVARGF 887
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
TQREGVDFNE+FSPVVKHSSIR+LLAMVA L+LELEQ+DVKTAFLHG L+EQI M QPEG
Sbjct: 888 TQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQPEG 947
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVY 27
FE KED+VCLL KSLYGLKQSPRQWY+RFD FMV GY RS YDSCVY
Sbjct: 948 FECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVY 997
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
vulgaris]
Length = 2676
Score = 246 bits (627), Expect = 5e-63
Identities = 117/179 (65%), Positives = 148/179 (82%)
Frame = -3
Query: 539 ARWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKG 360
++W++AM +E+ES KN ELV PK +KIVGCKWV+K+KEGTP +KAR+VA+
Sbjct: 681 SKWLMAMKQEMESLHKNNIWELVVAPKKKKIVGCKWVYKRKEGTPDSGGPIYKARVVARR 740
Query: 359 YTQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPE 180
+TQ EGVDF+EVF PVVKHSSIRVLLA+ A +LEL QLDVKTAFLHG+L+E+IYM QP+
Sbjct: 741 FTQVEGVDFHEVFPPVVKHSSIRVLLALEAMEDLELHQLDVKTAFLHGDLEEEIYMKQPK 800
Query: 179 GFEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
GFE+ GKE+HVC L KSLYGLKQSPRQWY+RFD+FM+ + + RS+YDSCVY+K+ +GS
Sbjct: 801 GFEVEGKEEHVCRLVKSLYGLKQSPRQWYRRFDSFMLAHEFTRSSYDSCVYYKELVSGS 859
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 243 bits (619), Expect = 5e-62
Identities = 115/172 (66%), Positives = 141/172 (81%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
RW+ AM +E+ES +KN T ELVK PK +K + CKW+FK+KEG ++AR+KARL+AKGY
Sbjct: 1037 RWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGY 1096
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q G+DFN+VFSPVVKHSSIR LL++VA + ELEQ+DVKTAFLHGEL+E IYM QP+G
Sbjct: 1097 SQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKG 1156
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHK 21
F + GKE+ VC LKKSLYGLKQSPRQWYKRFD+FM+ + RS YDSCVY K
Sbjct: 1157 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK 1208
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 241 bits (614), Expect = 2e-61
Identities = 119/178 (66%), Positives = 144/178 (80%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
+W+ AM EE++S +KN T ELV PK +K V CKW+FK+KEG E RFKARLVAKG+
Sbjct: 820 KWISAMQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGF 879
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q GVD+N+VFSPVVKHSSIR ++VA +LELEQLDVKTAFLHGEL+E+IYM QPEG
Sbjct: 880 SQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEG 939
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
F + GKED+VC LK+SLYGLKQSPRQWYKRFD+FM+ +G+ RS +DSCVY K NGS
Sbjct: 940 FIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVY-IKFVNGS 996
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 240 bits (613), Expect = 2e-61
Identities = 116/178 (65%), Positives = 140/178 (78%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
+W+ +M +E+ S KNQT ELV P+G K V CKW+FK K+G E ++K+RLVAKG+
Sbjct: 928 KWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGF 987
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q+EG+D+NEVFSPVVKH SIRVLLAMV+ NLEL+QLDVKTAFLHG L+E+IYM QPEG
Sbjct: 988 SQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEG 1047
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
F K DHVC LKKSLYGLKQSPRQWYKRFD FMV + + R+ YDSCVY K +GS
Sbjct: 1048 FVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGS 1105
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 240 bits (612), Expect = 3e-61
Identities = 115/172 (66%), Positives = 140/172 (81%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
RW+ AM +E+ES +KN + EL K PK +K + CKW+FK+KEG ++AR+KARLVAKGY
Sbjct: 739 RWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGY 798
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q G+DFN+VFSPVVKHSSIR LL++VA + ELEQ+DVKTAFLHGEL+E IYM QPEG
Sbjct: 799 SQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 858
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHK 21
F + GKE+ VC LKKSLYGLKQSPRQWYKRFD+FM+ + RS YDSCVY K
Sbjct: 859 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK 910
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 239 bits (609), Expect = 7e-61
Identities = 113/172 (65%), Positives = 139/172 (80%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
RW+ M +E+ES +KN T ELVK PK +K + CKW+FK+KEG ++AR+KARLVAKGY
Sbjct: 572 RWITTMHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGY 631
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q +DFN+VFSP+VKHSSIR LL++VA + ELEQ+DVKTAFLHGEL+E IYM QPEG
Sbjct: 632 SQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 691
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHK 21
F + GKE+ VC LKKSLYGLKQSPRQWYKRFD+FM+ + RS YD+CVY K
Sbjct: 692 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYLK 743
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 239 bits (609), Expect = 7e-61
Identities = 114/172 (66%), Positives = 138/172 (80%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
RW+ AM +E+ES KN T E VK PK +K + CKW+FK+KEG ++AR+KARLVAKGY
Sbjct: 865 RWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGY 924
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q G+DFN+VFSP++KHSSIR LL +VA + ELEQ+DVKTAFLHGEL+E IYM QPEG
Sbjct: 925 SQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 984
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHK 21
F + GKE+ VC LKKSLYGLKQSPRQWYKRFD+FM+ + RS YDSCVY K
Sbjct: 985 FVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK 1036
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 239 bits (609), Expect = 7e-61
Identities = 114/172 (66%), Positives = 138/172 (80%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
RW+ AM +E+ES KN T E VK PK +K + CKW+FK+KEG ++AR+KARLVAKGY
Sbjct: 865 RWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGY 924
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q G+DFN+VFSP++KHSSIR LL +VA + ELEQ+DVKTAFLHGEL+E IYM QPEG
Sbjct: 925 SQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 984
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHK 21
F + GKE+ VC LKKSLYGLKQSPRQWYKRFD+FM+ + RS YDSCVY K
Sbjct: 985 FVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLK 1036
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 238 bits (608), Expect = 9e-61
Identities = 115/172 (66%), Positives = 139/172 (80%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
RW+ AM +E+ES +KN T ELVK PK +K + CKW+FK+KEG ++AR+KARLVAKGY
Sbjct: 802 RWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGY 861
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q G+DFN+VFSPVVKHSSIR LL +VA + ELEQ++VKTAFLHGEL+E IYM QPEG
Sbjct: 862 SQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEG 921
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHK 21
F + GKE+ VC LKKSLYGLKQSPRQWYKRFD+FM+ + S YDSCVY K
Sbjct: 922 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLK 973
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 238 bits (607), Expect = 1e-60
Identities = 115/172 (66%), Positives = 139/172 (80%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
RW+ AM +E+ES +KN T ELVK PK +K + CKW+FK+KE ++A +KARLVAKGY
Sbjct: 216 RWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKECISPSDEAMYKARLVAKGY 275
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q G+DFN+VFSPVVKHSSIR LL++VA + ELEQ+DVKTAFLHGEL+E IYM QPEG
Sbjct: 276 SQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 335
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHK 21
F + GKE+ VC LKKSLYGLKQSPRQWYKRFD+FM+ + RS YDSCVY K
Sbjct: 336 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYVK 387
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 238 bits (606), Expect = 1e-60
Identities = 115/177 (64%), Positives = 141/177 (79%)
Frame = -3
Query: 533 WVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGYT 354
W+ AM EE++S +KN T E+V PK +K + CKW+FK+KEG E ++KARLVA+GY+
Sbjct: 832 WISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYS 891
Query: 353 QREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEGF 174
Q GVD+N+VFSPVVKHSSIR L++VA +LELEQLDVKTAFLHGEL+E IYM QPEGF
Sbjct: 892 QIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGF 951
Query: 173 EIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
+ GKE +VC LK+SLYGLKQSPRQW KRFD+FM+ + + RS YDSCVY KH NGS
Sbjct: 952 IVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGS 1007
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 238 bits (606), Expect = 1e-60
Identities = 115/177 (64%), Positives = 141/177 (79%)
Frame = -3
Query: 533 WVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGYT 354
W+ AM EE++S +KN T E+V PK +K + CKW+FK+KEG E ++KARLVA+GY+
Sbjct: 832 WISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYS 891
Query: 353 QREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEGF 174
Q GVD+N+VFSPVVKHSSIR L++VA +LELEQLDVKTAFLHGEL+E IYM QPEGF
Sbjct: 892 QIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGF 951
Query: 173 EIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
+ GKE +VC LK+SLYGLKQSPRQW KRFD+FM+ + + RS YDSCVY KH NGS
Sbjct: 952 IVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGS 1007
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 238 bits (606), Expect = 1e-60
Identities = 115/177 (64%), Positives = 141/177 (79%)
Frame = -3
Query: 533 WVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGYT 354
W+ AM EE++S +KN T E+V PK +K + CKW+FK+KEG E ++KARLVA+GY+
Sbjct: 832 WISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYS 891
Query: 353 QREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEGF 174
Q GVD+N+VFSPVVKHSSIR L++VA +LELEQLDVKTAFLHGEL+E IYM QPEGF
Sbjct: 892 QIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGF 951
Query: 173 EIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
+ GKE +VC LK+SLYGLKQSPRQW KRFD+FM+ + + RS YDSCVY KH NGS
Sbjct: 952 IVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVY-IKHVNGS 1007
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 236 bits (601), Expect = 6e-60
Identities = 114/172 (66%), Positives = 139/172 (80%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
RW+ AM +E+ES +KN T ELVK PK +K + CKW+FK+K+G ++AR+KARLVAKGY
Sbjct: 709 RWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGY 768
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q G+DFN+VFSPV+KHSSIR LL++VA + ELEQ+DVKTAFLHGEL+E IYM QPEG
Sbjct: 769 SQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEG 828
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHK 21
F + GKE+ V LKKSLYGLKQSPRQWYKRFD+FM + RS YDSCVY K
Sbjct: 829 FVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYLK 880
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 235 bits (600), Expect = 7e-60
Identities = 115/173 (66%), Positives = 135/173 (78%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
+W AM EE+ S KN T +LV P+ K++GC+WVF +K G PGVE RF ARLVAKG+
Sbjct: 830 KWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGF 889
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
TQ+EGVD+NE+FSPVVKH SIR LL+MV N+EL+Q+DVKTAFLHG L+E+IYM QPEG
Sbjct: 890 TQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEG 949
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKK 18
FEI + VCLLK+SLYGLKQSPRQW RFD FM G Y RSAYDSCVY KK
Sbjct: 950 FEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKK 1002
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 235 bits (599), Expect = 1e-59
Identities = 115/178 (64%), Positives = 141/178 (79%)
Frame = -3
Query: 536 RWVVAMGEEIESFDKNQT*ELVKPPKGQKIVGCKWVFKKKEGTPGVEDARFKARLVAKGY 357
+W+ A+ EE++S +KN T ELV PK +K V CKW+FK+KEG E RFK RLVAKG+
Sbjct: 820 KWISAIQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGF 879
Query: 356 TQREGVDFNEVFSPVVKHSSIRVLLAMVAKLNLELEQLDVKTAFLHGELDEQIYMHQPEG 177
+Q GVD+N+VFSPVVKHSSIR ++V +LELEQLDVKT FLHGEL+E+IYM QPEG
Sbjct: 880 SQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEG 939
Query: 176 FEIHGKEDHVCLLKKSLYGLKQSPRQWYKRFDTFMVGNGYCRSAYDSCVYHKKHSNGS 3
F + GKED+VC LK+SLYGLKQSPRQWYKRFD+FM+ +G+ RS +DSCVY K NGS
Sbjct: 940 FIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVY-IKFVNGS 996