BLASTX nr result
ID: Cinnamomum25_contig00023239
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00023239
(464 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011019923.1| PREDICTED: F-box protein SKIP2-like isoform ... 70 4e-10
ref|XP_011019922.1| PREDICTED: F-box protein SKIP2-like isoform ... 70 4e-10
ref|XP_011019921.1| PREDICTED: F-box protein SKIP2-like isoform ... 70 4e-10
ref|XP_002309038.2| hypothetical protein POPTR_0006s08160g [Popu... 70 4e-10
ref|XP_010665121.1| PREDICTED: F-box protein SKIP2-like [Vitis v... 70 7e-10
ref|XP_002514498.1| skip-2, putative [Ricinus communis] gi|22354... 65 2e-08
ref|XP_007014604.1| VIER F-box protein 1 [Theobroma cacao] gi|50... 64 3e-08
gb|KDP27756.1| hypothetical protein JCGZ_19785 [Jatropha curcas] 62 1e-07
gb|ABK24412.1| unknown [Picea sitchensis] 60 6e-07
>ref|XP_011019923.1| PREDICTED: F-box protein SKIP2-like isoform X3 [Populus euphratica]
Length = 559
Score = 70.5 bits (171), Expect = 4e-10
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Frame = -2
Query: 463 DAIVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVESLSIXXXXXXXXXXXXX 284
+A+ GCPNLVKLKVKRCK VTQA V LR QR LV++LD S+
Sbjct: 436 EAVGRGCPNLVKLKVKRCKGVTQAMVSRLRFQRSSLVVSLDAGSMLFDSGGISLLASAVN 495
Query: 283 XAVHGRGWG--------PRAVRPLINSSSTHLVCGSRGANLIKSKLSNAMLLRR 146
G A ++TH++C SRGA L++SK +A+ L R
Sbjct: 496 EEEQGTATAMTNTNSSRSAAAAAATTVAATHVICSSRGALLLRSKFESALQLGR 549
>ref|XP_011019922.1| PREDICTED: F-box protein SKIP2-like isoform X2 [Populus euphratica]
Length = 559
Score = 70.5 bits (171), Expect = 4e-10
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Frame = -2
Query: 463 DAIVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVESLSIXXXXXXXXXXXXX 284
+A+ GCPNLVKLKVKRCK VTQA V LR QR LV++LD S+
Sbjct: 436 EAVGRGCPNLVKLKVKRCKGVTQAMVSRLRFQRSSLVVSLDAGSMLFDSGGISLLASAVN 495
Query: 283 XAVHGRGWG--------PRAVRPLINSSSTHLVCGSRGANLIKSKLSNAMLLRR 146
G A ++TH++C SRGA L++SK +A+ L R
Sbjct: 496 EEEQGTATAMTNTNSSRSAAAAAATTVAATHVICSSRGALLLRSKFESALQLGR 549
>ref|XP_011019921.1| PREDICTED: F-box protein SKIP2-like isoform X1 [Populus euphratica]
Length = 573
Score = 70.5 bits (171), Expect = 4e-10
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Frame = -2
Query: 463 DAIVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVESLSIXXXXXXXXXXXXX 284
+A+ GCPNLVKLKVKRCK VTQA V LR QR LV++LD S+
Sbjct: 450 EAVGRGCPNLVKLKVKRCKGVTQAMVSRLRFQRSSLVVSLDAGSMLFDSGGISLLASAVN 509
Query: 283 XAVHGRGWG--------PRAVRPLINSSSTHLVCGSRGANLIKSKLSNAMLLRR 146
G A ++TH++C SRGA L++SK +A+ L R
Sbjct: 510 EEEQGTATAMTNTNSSRSAAAAAATTVAATHVICSSRGALLLRSKFESALQLGR 563
>ref|XP_002309038.2| hypothetical protein POPTR_0006s08160g [Populus trichocarpa]
gi|550335763|gb|EEE92561.2| hypothetical protein
POPTR_0006s08160g [Populus trichocarpa]
Length = 572
Score = 70.5 bits (171), Expect = 4e-10
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Frame = -2
Query: 463 DAIVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVES-------LSIXXXXXX 305
+A+ GCPNLVKLKVKRCK VTQA V LR QR LV++LD S +S+
Sbjct: 450 EAVGRGCPNLVKLKVKRCKGVTQAMVSRLRFQRSSLVVSLDAGSMLFDSGGISLLASAVN 509
Query: 304 XXXXXXXXAVHGRGWGPRAVRPLINSSSTHLVCGSRGANLIKSKLSNAMLLRR 146
A+ A ++TH++C SRGA L++SK +A+ L R
Sbjct: 510 EEEQGTATAMTNTNSTRSAAAAATTVAATHVICSSRGALLLRSKFESALQLGR 562
>ref|XP_010665121.1| PREDICTED: F-box protein SKIP2-like [Vitis vinifera]
Length = 538
Score = 69.7 bits (169), Expect = 7e-10
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Frame = -2
Query: 460 AIVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVESLSIXXXXXXXXXXXXXX 281
A+ GCP+LVKLKVKRC+ VTQ +V LR QR +V+++D S+
Sbjct: 412 AVGEGCPSLVKLKVKRCRGVTQVSVSQLRLQRGSVVVSVDAGSMIFEEGMAMAEEETGTA 471
Query: 280 AVHGRGW------------GPRAVRPLINSSSTHLVCGSRGANLIKSKLSNAMLLRR 146
G G G R R S+ST++VC SRGA L++SK NA+ L R
Sbjct: 472 GGGGGGGGGVEGGGGERTRGGRISRRRSTSTSTNVVCSSRGALLLRSKFENALQLSR 528
>ref|XP_002514498.1| skip-2, putative [Ricinus communis] gi|223546397|gb|EEF47898.1|
skip-2, putative [Ricinus communis]
Length = 511
Score = 64.7 bits (156), Expect = 2e-08
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = -2
Query: 463 DAIVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVESLSIXXXXXXXXXXXXX 284
+AI GCPNLVKLKVKRC+ +++A+V LR QR +V+++D S+
Sbjct: 401 EAIGGGCPNLVKLKVKRCRGISEASVRKLRMQRTSVVVSVDTGSMVFSGQRMTITQEEEE 460
Query: 283 XAVHGRGWGPRAVRPLINSSST----HLVCGSRGANLIKSKLSNAMLLRR 146
+ R++R +++T H+VC SR A ++S+L NA+ + R
Sbjct: 461 AEQQQQN---RSIRTPNTAAATTAAAHVVCSSRSALFLRSRLENALQISR 507
>ref|XP_007014604.1| VIER F-box protein 1 [Theobroma cacao] gi|508784967|gb|EOY32223.1|
VIER F-box protein 1 [Theobroma cacao]
Length = 586
Score = 64.3 bits (155), Expect = 3e-08
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Frame = -2
Query: 460 AIVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVESLSIXXXXXXXXXXXXXX 281
A+ GCP+LVKLKVKRC+ VTQA V L+ +R L++++D S+ +
Sbjct: 472 AVGEGCPSLVKLKVKRCRGVTQATVSKLKIKRRCLMVSVDSGSMLL---------DGDEL 522
Query: 280 AVHGRGWGPRAVRPLIN-----SSSTHLVCGSRGANLIKSKLSNAMLLRR 146
+ G P A+ P N SS TH++C SRGA L++S NA+ L R
Sbjct: 523 DLEEEGMVPSAL-PNTNASGSTSSRTHVICSSRGALLLRSTFENALQLHR 571
>gb|KDP27756.1| hypothetical protein JCGZ_19785 [Jatropha curcas]
Length = 242
Score = 62.0 bits (149), Expect = 1e-07
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Frame = -2
Query: 463 DAIVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVESLSIXXXXXXXXXXXXX 284
+AI GCPNL+KLKVKRC+ ++Q +V LR+QR ++V+++D I
Sbjct: 145 EAIGDGCPNLIKLKVKRCRGISQVSVQKLRKQRSQVVVSVDTAGSMI------------- 191
Query: 283 XAVHGRG--WGPRAVRPLINSSSTHLVCGSRGANLIKSKLSNAMLL--RRP 143
HG+ RP+ ++T ++C SR A ++S+ +A+ L RRP
Sbjct: 192 --FHGQRVLLADEQQRPITPPNTTSVICSSRSALFLRSRFQSAVQLGRRRP 240
>gb|ABK24412.1| unknown [Picea sitchensis]
Length = 498
Score = 60.1 bits (144), Expect = 6e-07
Identities = 37/99 (37%), Positives = 54/99 (54%)
Frame = -2
Query: 457 IVAGCPNLVKLKVKRCKEVTQANVCWLRQQRVELVIALDVESLSIXXXXXXXXXXXXXXA 278
I GCP+L+KLKVKRCK VT +VC ++ +R L++A+D S +
Sbjct: 399 IAGGCPSLIKLKVKRCKGVTSKSVCQVQTKRGSLIVAVDGGSQTAGE------------- 445
Query: 277 VHGRGWGPRAVRPLINSSSTHLVCGSRGANLIKSKLSNA 161
+G + + STH++CGSRG +LIK+KL A
Sbjct: 446 -DDQGRSLQLGDDRVIRESTHVLCGSRG-HLIKTKLGTA 482