BLASTX nr result
ID: Cinnamomum25_contig00022915
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00022915
(315 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010907957.1| PREDICTED: exosome complex component RRP42 [... 64 4e-08
ref|XP_008776104.1| PREDICTED: exosome complex component RRP42 [... 62 2e-07
ref|XP_009398238.1| PREDICTED: exosome complex component RRP42 [... 60 4e-07
gb|EEC69134.1| hypothetical protein OsI_38058 [Oryza sativa Indi... 60 4e-07
ref|XP_006848982.2| PREDICTED: exosome complex component RRP42 [... 60 7e-07
gb|ERN10563.1| hypothetical protein AMTR_s00028p00065140 [Ambore... 60 7e-07
ref|XP_002441975.1| hypothetical protein SORBIDRAFT_08g006250 [S... 60 7e-07
ref|XP_008646710.1| PREDICTED: exosome complex component RRP42-l... 59 1e-06
ref|XP_008645123.1| PREDICTED: exosome complex component RRP42-l... 59 1e-06
gb|AFW69636.1| hypothetical protein ZEAMMB73_056962 [Zea mays] 59 1e-06
ref|NP_001241774.1| exosome complex exonuclease RRP42 [Zea mays]... 59 1e-06
gb|ACG32102.1| exosome complex exonuclease RRP42 [Zea mays] gi|4... 59 1e-06
ref|XP_008644243.1| PREDICTED: exosome complex exonuclease RRP42... 59 1e-06
gb|AFW69626.1| hypothetical protein ZEAMMB73_456689, partial [Ze... 59 1e-06
ref|XP_010324603.1| PREDICTED: exosome complex exonuclease RRP42... 59 2e-06
gb|KEH20432.1| exosome complex exonuclease RRP41 [Medicago trunc... 59 2e-06
gb|AGT16518.1| hypothetical protein SHCRBa_119_B13_R_180 [Saccha... 59 2e-06
gb|ACJ85230.1| unknown [Medicago truncatula] 59 2e-06
ref|XP_004244581.1| PREDICTED: exosome complex exonuclease RRP42... 59 2e-06
gb|AFK43853.1| unknown [Medicago truncatula] 59 2e-06
>ref|XP_010907957.1| PREDICTED: exosome complex component RRP42 [Elaeis guineensis]
Length = 286
Score = 63.9 bits (154), Expect = 4e-08
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAAD 202
AGLDPSVILDM+SVAKHVSQ LISVLDSEI AAE+ AD
Sbjct: 248 AGLDPSVILDMISVAKHVSQNLISVLDSEIAAAEANAD 285
>ref|XP_008776104.1| PREDICTED: exosome complex component RRP42 [Phoenix dactylifera]
Length = 286
Score = 61.6 bits (148), Expect = 2e-07
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAA 205
AGLDPSVILDM+SVAKHVSQ LISVLDSEI AAE+ A
Sbjct: 248 AGLDPSVILDMISVAKHVSQNLISVLDSEIAAAEANA 284
>ref|XP_009398238.1| PREDICTED: exosome complex component RRP42 [Musa acuminata subsp.
malaccensis]
Length = 287
Score = 60.5 bits (145), Expect = 4e-07
Identities = 29/38 (76%), Positives = 36/38 (94%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAAD 202
AGLDPSVILDM+SVAKHV +QL+S+LDSEI AAE++A+
Sbjct: 248 AGLDPSVILDMISVAKHVGEQLMSLLDSEIAAAEASAE 285
>gb|EEC69134.1| hypothetical protein OsI_38058 [Oryza sativa Indica Group]
Length = 334
Score = 60.5 bits (145), Expect = 4e-07
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESA 208
AGLDPSVI DM+SVAKHVS+Q ISVLDSEI AAE+A
Sbjct: 298 AGLDPSVIFDMISVAKHVSRQFISVLDSEILAAEAA 333
>ref|XP_006848982.2| PREDICTED: exosome complex component RRP42 [Amborella trichopoda]
Length = 287
Score = 59.7 bits (143), Expect = 7e-07
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPS+I+DMVSVAKH+SQQLI+ +DSEI+AAE+ S
Sbjct: 248 AGLDPSIIIDMVSVAKHLSQQLIATVDSEIYAAEARESS 286
>gb|ERN10563.1| hypothetical protein AMTR_s00028p00065140 [Amborella trichopoda]
Length = 286
Score = 59.7 bits (143), Expect = 7e-07
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPS+I+DMVSVAKH+SQQLI+ +DSEI+AAE+ S
Sbjct: 247 AGLDPSIIIDMVSVAKHLSQQLIATVDSEIYAAEARESS 285
>ref|XP_002441975.1| hypothetical protein SORBIDRAFT_08g006250 [Sorghum bicolor]
gi|241942668|gb|EES15813.1| hypothetical protein
SORBIDRAFT_08g006250 [Sorghum bicolor]
Length = 287
Score = 59.7 bits (143), Expect = 7e-07
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAAD 202
AGLDPSVILDM+SVAKHVSQQ IS+LDSEI AAE+ +
Sbjct: 249 AGLDPSVILDMLSVAKHVSQQFISLLDSEIAAAEAEVE 286
>ref|XP_008646710.1| PREDICTED: exosome complex component RRP42-like [Zea mays]
Length = 266
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVI DM+SVAKHVSQQ IS+LDSEI AAE+ ++
Sbjct: 227 AGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 265
>ref|XP_008645123.1| PREDICTED: exosome complex component RRP42-like [Zea mays]
Length = 338
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVI DM+SVAKHVSQQ IS+LDSEI AAE+ ++
Sbjct: 299 AGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 337
>gb|AFW69636.1| hypothetical protein ZEAMMB73_056962 [Zea mays]
Length = 63
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVI DM+SVAKHVSQQ IS+LDSEI AAE+ ++
Sbjct: 24 AGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 62
>ref|NP_001241774.1| exosome complex exonuclease RRP42 [Zea mays]
gi|195636336|gb|ACG37636.1| exosome complex exonuclease
RRP42 [Zea mays]
Length = 287
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVI DM+SVAKHVSQQ IS+LDSEI AAE+ ++
Sbjct: 248 AGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEKEA 286
>gb|ACG32102.1| exosome complex exonuclease RRP42 [Zea mays]
gi|413935080|gb|AFW69631.1| exosome complex exonuclease
RRP42 isoform 1 [Zea mays] gi|413935081|gb|AFW69632.1|
exosome complex exonuclease RRP42 isoform 2 [Zea mays]
gi|413935082|gb|AFW69633.1| exosome complex exonuclease
RRP42 isoform 3 [Zea mays] gi|413935083|gb|AFW69634.1|
exosome complex exonuclease RRP42 isoform 4 [Zea mays]
Length = 287
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVI DM+SVAKHVSQQ IS+LDSEI AAE+ ++
Sbjct: 248 AGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 286
>ref|XP_008644243.1| PREDICTED: exosome complex exonuclease RRP42 isoform X1 [Zea mays]
gi|670405158|ref|XP_008644244.1| PREDICTED: exosome
complex exonuclease RRP42 isoform X1 [Zea mays]
gi|194707850|gb|ACF88009.1| unknown [Zea mays]
gi|223975603|gb|ACN31989.1| unknown [Zea mays]
gi|413935071|gb|AFW69622.1| exosome complex exonuclease
RRP42 isoform 1 [Zea mays] gi|413935072|gb|AFW69623.1|
exosome complex exonuclease RRP42 isoform 2 [Zea mays]
gi|413935073|gb|AFW69624.1| exosome complex exonuclease
RRP42 isoform 3 [Zea mays]
Length = 287
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVI DM+SVAKHVSQQ IS+LDSEI AAE+ ++
Sbjct: 248 AGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 286
>gb|AFW69626.1| hypothetical protein ZEAMMB73_456689, partial [Zea mays]
gi|413935078|gb|AFW69629.1| hypothetical protein
ZEAMMB73_937743, partial [Zea mays]
Length = 209
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVI DM+SVAKHVSQQ IS+LDSEI AAE+ ++
Sbjct: 170 AGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEAEEEA 208
>ref|XP_010324603.1| PREDICTED: exosome complex exonuclease RRP42 isoform X2 [Solanum
lycopersicum]
Length = 288
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESA 208
AGLDPSVILDM+SVAKHVS+QLI+ LDSEI AAE A
Sbjct: 248 AGLDPSVILDMISVAKHVSEQLINKLDSEIEAAERA 283
>gb|KEH20432.1| exosome complex exonuclease RRP41 [Medicago truncatula]
Length = 217
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVILDMVSVAKHVS+QLI+ LDSEI +AE+ +S
Sbjct: 179 AGLDPSVILDMVSVAKHVSEQLINKLDSEIASAEAEDES 217
>gb|AGT16518.1| hypothetical protein SHCRBa_119_B13_R_180 [Saccharum hybrid
cultivar R570]
Length = 286
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAES 211
AGLDPSVI DM+SVAKHVSQQ IS+LDSEI AAE+
Sbjct: 248 AGLDPSVIFDMISVAKHVSQQFISLLDSEIAAAEA 282
>gb|ACJ85230.1| unknown [Medicago truncatula]
Length = 286
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVILDMVSVAKHVS+QLI+ LDSEI +AE+ +S
Sbjct: 248 AGLDPSVILDMVSVAKHVSEQLINKLDSEIASAEAEDES 286
>ref|XP_004244581.1| PREDICTED: exosome complex exonuclease RRP42 isoform X1 [Solanum
lycopersicum]
Length = 314
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESA 208
AGLDPSVILDM+SVAKHVS+QLI+ LDSEI AAE A
Sbjct: 274 AGLDPSVILDMISVAKHVSEQLINKLDSEIEAAERA 309
>gb|AFK43853.1| unknown [Medicago truncatula]
Length = 286
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 315 AGLDPSVILDMVSVAKHVSQQLISVLDSEIFAAESAADS 199
AGLDPSVILDMVSVAKHVS+QLI+ LDSEI +AE+ +S
Sbjct: 248 AGLDPSVILDMVSVAKHVSEQLINKLDSEIASAEAEDES 286