BLASTX nr result

ID: Cinnamomum25_contig00022557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00022557
         (259 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010251392.1| PREDICTED: sister chromatid cohesion 1 prote...    59   1e-06

>ref|XP_010251392.1| PREDICTED: sister chromatid cohesion 1 protein 4-like [Nelumbo
           nucifera]
          Length = 1271

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
 Frame = -3

Query: 257 SQIGLDLDEDLFLEKASSGPSLAPLGVEENVDPDSSSQPLAFTEMDIDG---VETSKDQP 87
           SQIGLDLDEDLFL K  +   +  L +E++VD  +S QP+    +DID    +E + D  
Sbjct: 170 SQIGLDLDEDLFLNKNKAAADM--LSLEDDVDLQASGQPMTPFTVDIDDEQTIEGTADVE 227

Query: 86  KLLAGGF--EIDSDILESKGPDDSSRLADD 3
            ++ GG   +IDSD+ +    DDSS L  D
Sbjct: 228 IMVEGGLGEQIDSDLCDPMRADDSSILNGD 257


Top