BLASTX nr result

ID: Cinnamomum25_contig00022272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00022272
         (265 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632719.1| PREDICTED: zinc finger protein 8 [Vitis vini...    63   9e-08
emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]    63   9e-08
ref|XP_007029058.1| C2H2 and C2HC zinc fingers superfamily prote...    58   3e-06
ref|XP_002531176.1| nucleic acid binding protein, putative [Rici...    56   8e-06

>ref|XP_003632719.1| PREDICTED: zinc finger protein 8 [Vitis vinifera]
          Length = 238

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 53/111 (47%), Positives = 59/111 (53%), Gaps = 26/111 (23%)
 Frame = -3

Query: 263 LNYRLGSAPPTHSPQTALSSAPPL-HPYW-------NSRMYGGHVSGSQ-PINGNPLPGL 111
           +NYRLGSAP            PP+ +P W       N R YG H S SQ PINGNPL  L
Sbjct: 126 VNYRLGSAP-----------TPPITYPSWGSQAISSNGRFYGSHGSFSQPPINGNPL-AL 173

Query: 110 LRIPI---VQPSF-RDRS----LPLFAGE---------GIPSQSRHVYEST 9
            RIP      P+F RDRS    LPLFAG+         G  SQSR+VYEST
Sbjct: 174 WRIPASVQTTPTFSRDRSSHHPLPLFAGDDLKPSSHVGGSTSQSRYVYEST 224


>emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]
          Length = 270

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 53/111 (47%), Positives = 59/111 (53%), Gaps = 26/111 (23%)
 Frame = -3

Query: 263 LNYRLGSAPPTHSPQTALSSAPPL-HPYW-------NSRMYGGHVSGSQ-PINGNPLPGL 111
           +NYRLGSAP            PP+ +P W       N R YG H S SQ PINGNPL  L
Sbjct: 158 VNYRLGSAP-----------TPPITYPSWGSQAISSNGRFYGSHGSFSQPPINGNPL-AL 205

Query: 110 LRIPI---VQPSF-RDRS----LPLFAGE---------GIPSQSRHVYEST 9
            RIP      P+F RDRS    LPLFAG+         G  SQSR+VYEST
Sbjct: 206 WRIPASVQTTPTFSRDRSSHHPLPLFAGDDLKPSSHVGGSTSQSRYVYEST 256


>ref|XP_007029058.1| C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma
           cacao] gi|508717663|gb|EOY09560.1| C2H2 and C2HC zinc
           fingers superfamily protein, putative [Theobroma cacao]
          Length = 238

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 50/111 (45%), Positives = 56/111 (50%), Gaps = 27/111 (24%)
 Frame = -3

Query: 263 LNYRLGSAPPTHSPQTALSSAPPLHPYWN-------SRMYGGHVSGSQ-PINGNPLPGLL 108
           +NYRLGSAP          +    +P WN       SR YG H S SQ PING+PL GL 
Sbjct: 125 VNYRLGSAP----------TPAMTYPSWNNSISSSSSRFYGNHGSFSQPPINGSPL-GLW 173

Query: 107 RIPIVQPS----FRDRS----LPLFAGE-----------GIPSQSRHVYES 12
           RIP    S     RDRS    LPLFAG+           G  SQSR+VYES
Sbjct: 174 RIPATVQSNSSFNRDRSSSHPLPLFAGDELKPSQVVGGGGSSSQSRYVYES 224


>ref|XP_002531176.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529246|gb|EEF31219.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 231

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 48/107 (44%), Positives = 56/107 (52%), Gaps = 20/107 (18%)
 Frame = -3

Query: 263 LNYRLGSAPPTHSPQTALSSAPPLHPYWNS-----RMYGGHVS-GSQPINGNPLPGLLRI 102
           +NYR+GS     +P  A+S     +P WNS     R YG H S   QPING+PL GL RI
Sbjct: 125 MNYRIGS-----NPTPAMS-----YPSWNSHANSSRFYGSHGSYPQQPINGSPL-GLWRI 173

Query: 101 PIVQPS---FRDRS---LPLFAGE--------GIPSQSRHVYESTAS 3
           P V  S    RDRS   LPLF+GE        G  SQ R+ YE   S
Sbjct: 174 PTVHSSATLHRDRSMNPLPLFSGEELKLSQVGGSSSQGRYGYEGKPS 220


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