BLASTX nr result
ID: Cinnamomum25_contig00022189
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00022189
(200 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006849925.1| PREDICTED: U5 small nuclear ribonucleoprotei... 96 7e-18
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 94 4e-17
ref|XP_010088740.1| U5 small nuclear ribonucleoprotein 200 kDa h... 92 1e-16
gb|KMT16884.1| hypothetical protein BVRB_2g043590 [Beta vulgaris... 91 2e-16
ref|XP_011070096.1| PREDICTED: U5 small nuclear ribonucleoprotei... 91 2e-16
ref|XP_011099903.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 91 2e-16
ref|XP_010670756.1| PREDICTED: U5 small nuclear ribonucleoprotei... 91 2e-16
ref|XP_009606072.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 91 2e-16
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,... 91 3e-16
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,... 91 3e-16
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 91 4e-16
ref|XP_006306573.1| hypothetical protein CARUB_v10008066mg [Caps... 91 4e-16
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 91 4e-16
ref|XP_010477352.1| PREDICTED: U5 small nuclear ribonucleoprotei... 90 5e-16
ref|XP_010459790.1| PREDICTED: U5 small nuclear ribonucleoprotei... 90 5e-16
ref|XP_010498549.1| PREDICTED: U5 small nuclear ribonucleoprotei... 90 5e-16
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel... 90 5e-16
gb|AAL31915.1|AF419583_1 At1g20960/F9H16_5 [Arabidopsis thaliana... 90 5e-16
ref|XP_009346826.1| PREDICTED: U5 small nuclear ribonucleoprotei... 90 7e-16
ref|XP_008388784.1| PREDICTED: U5 small nuclear ribonucleoprotei... 90 7e-16
>ref|XP_006849925.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
[Amborella trichopoda] gi|548853523|gb|ERN11506.1|
hypothetical protein AMTR_s00022p00114710 [Amborella
trichopoda]
Length = 2171
Score = 96.3 bits (238), Expect = 7e-18
Identities = 48/65 (73%), Positives = 50/65 (76%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR+SKV L F AP EVGKK Y LYFM DSYLGCDQEY FT+DVK D
Sbjct: 2107 QLLAIKRVSLQRKSKVKLEFPAPSEVGKKEYTLYFMCDSYLGCDQEYNFTIDVKEAMEGD 2166
Query: 18 GDGRE 4
G G E
Sbjct: 2167 GGGNE 2171
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
[Cucumis sativus] gi|700202051|gb|KGN57184.1|
hypothetical protein Csa_3G168950 [Cucumis sativus]
Length = 2175
Score = 94.0 bits (232), Expect = 4e-17
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR++KV L+FTAP + GKK+Y LYFM DSYLGCDQEY FTVDVK A D
Sbjct: 2113 QLLAIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFD 2172
Query: 18 GD 13
D
Sbjct: 2173 ED 2174
>ref|XP_010088740.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Morus notabilis]
gi|587846435|gb|EXB36921.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Morus notabilis]
Length = 2183
Score = 92.4 bits (228), Expect = 1e-16
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3
Query: 195 LLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DDG 16
LLAIKRVSLQR+SKV L+FTAP++ GKK+Y LYFM DSYLGCDQEY FTVDVK D
Sbjct: 2120 LLAIKRVSLQRKSKVKLDFTAPLDAGKKSYTLYFMCDSYLGCDQEYPFTVDVKREGDDVE 2179
Query: 15 DGRE 4
G E
Sbjct: 2180 SGEE 2183
>gb|KMT16884.1| hypothetical protein BVRB_2g043590 [Beta vulgaris subsp. vulgaris]
Length = 1727
Score = 91.3 bits (225), Expect = 2e-16
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGT-A*D 22
QLLAIKRV+LQR+SKV L+F AP EVGKK Y LY+M DSYLGCDQEY F +DVK A D
Sbjct: 1662 QLLAIKRVTLQRKSKVKLDFVAPAEVGKKTYTLYYMCDSYLGCDQEYTFGIDVKDAGAPD 1721
Query: 21 DGDGRE 4
D G+E
Sbjct: 1722 DDSGKE 1727
>ref|XP_011070096.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Sesamum indicum] gi|747048192|ref|XP_011070097.1|
PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Sesamum indicum]
gi|747048194|ref|XP_011070098.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like [Sesamum
indicum]
Length = 2167
Score = 91.3 bits (225), Expect = 2e-16
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA 28
QLLAIKRV+LQR+S+V L+FTAP E GKK Y LYFM DSYLGCDQEY FTVDVK A
Sbjct: 2105 QLLAIKRVALQRKSRVKLDFTAPAEPGKKTYTLYFMCDSYLGCDQEYSFTVDVKEAA 2161
>ref|XP_011099903.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Sesamum indicum]
Length = 2166
Score = 91.3 bits (225), Expect = 2e-16
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA 28
QLLAIKRV+LQR+S+V L+FTAP E GKK Y LYFM DSYLGCDQEY FTVDVK A
Sbjct: 2104 QLLAIKRVALQRKSRVKLDFTAPAEPGKKTYTLYFMCDSYLGCDQEYSFTVDVKEAA 2160
>ref|XP_010670756.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Beta vulgaris subsp. vulgaris]
Length = 2175
Score = 91.3 bits (225), Expect = 2e-16
Identities = 46/66 (69%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGT-A*D 22
QLLAIKRV+LQR+SKV L+F AP EVGKK Y LY+M DSYLGCDQEY F +DVK A D
Sbjct: 2110 QLLAIKRVTLQRKSKVKLDFVAPAEVGKKTYTLYYMCDSYLGCDQEYTFGIDVKDAGAPD 2169
Query: 21 DGDGRE 4
D G+E
Sbjct: 2170 DDSGKE 2175
>ref|XP_009606072.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Nicotiana tomentosiformis]
Length = 2189
Score = 91.3 bits (225), Expect = 2e-16
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRV+LQR+S+V L+F AP E G + Y LYFM DSYLGCDQEY FT+DVK +D
Sbjct: 2125 QLLAIKRVTLQRKSRVKLDFAAPAEAGTRTYTLYFMCDSYLGCDQEYSFTLDVKAPMGED 2184
Query: 18 GDGRE 4
GRE
Sbjct: 2185 DSGRE 2189
>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 90.9 bits (224), Expect = 3e-16
Identities = 47/66 (71%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR++KV L F AP E KKAY LYFM DSYLGCDQEY FTVD K A D
Sbjct: 1997 QLLAIKRVSLQRKAKVKLEFAAPTEAAKKAYTLYFMCDSYLGCDQEYNFTVDAKEAAGPD 2056
Query: 18 GD-GRE 4
D G+E
Sbjct: 2057 EDSGKE 2062
>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 90.9 bits (224), Expect = 3e-16
Identities = 47/66 (71%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR++KV L F AP E KKAY LYFM DSYLGCDQEY FTVD K A D
Sbjct: 2111 QLLAIKRVSLQRKAKVKLEFAAPTEAAKKAYTLYFMCDSYLGCDQEYNFTVDAKEAAGPD 2170
Query: 18 GD-GRE 4
D G+E
Sbjct: 2171 EDSGKE 2176
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Cicer
arietinum] gi|502089221|ref|XP_004488846.1| PREDICTED: U5
small nuclear ribonucleoprotein 200 kDa helicase [Cicer
arietinum]
Length = 2187
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = -3
Query: 195 LLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DDG 16
LLAIKRVSLQR+ K L F AP + GKK+Y+LYFM DSY+GCDQEYGFT+DVK D
Sbjct: 2124 LLAIKRVSLQRKLKAKLEFAAPADAGKKSYVLYFMCDSYMGCDQEYGFTLDVKEADGGDD 2183
Query: 15 DGRE 4
GRE
Sbjct: 2184 SGRE 2187
>ref|XP_006306573.1| hypothetical protein CARUB_v10008066mg [Capsella rubella]
gi|482575284|gb|EOA39471.1| hypothetical protein
CARUB_v10008066mg [Capsella rubella]
Length = 2170
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR++KV L+FT P E G+K+Y LYFM DSYLGCDQEY F+VDVKG+ D
Sbjct: 2107 QLLAIKRVSLQRKAKVKLDFTVPTESGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGAGD 2166
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max]
Length = 2183
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/64 (67%), Positives = 47/64 (73%)
Frame = -3
Query: 195 LLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DDG 16
LLAIKRVSLQRR K L F AP + G+K+Y LYFM DSYLGCDQEYGFT+DV D
Sbjct: 2120 LLAIKRVSLQRRLKAKLEFDAPADAGRKSYSLYFMCDSYLGCDQEYGFTIDVNADGGDQD 2179
Query: 15 DGRE 4
GRE
Sbjct: 2180 SGRE 2183
>ref|XP_010477352.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Camelina sativa]
Length = 2165
Score = 90.1 bits (222), Expect = 5e-16
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR++KV L+FT P E G+K+Y LYFM DSYLGCDQEY F+VDVKG D
Sbjct: 2102 QLLAIKRVSLQRKAKVKLDFTVPTEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGAGAGD 2161
>ref|XP_010459790.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Camelina sativa]
Length = 2170
Score = 90.1 bits (222), Expect = 5e-16
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR++KV L+FT P E G+K+Y LYFM DSYLGCDQEY F+VDVKG D
Sbjct: 2107 QLLAIKRVSLQRKAKVKLDFTVPTEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGAGPGD 2166
>ref|XP_010498549.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Camelina sativa] gi|727434608|ref|XP_010498550.1|
PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Camelina sativa]
Length = 2170
Score = 90.1 bits (222), Expect = 5e-16
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR++KV L+FT P E G+K+Y LYFM DSYLGCDQEY F+VDVKG D
Sbjct: 2107 QLLAIKRVSLQRKAKVKLDFTVPTEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGAGAGD 2166
>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|334182730|ref|NP_001185050.1| putative U5
small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
RNA helicase [Arabidopsis thaliana]
gi|332191925|gb|AEE30046.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
gi|332191926|gb|AEE30047.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2171
Score = 90.1 bits (222), Expect = 5e-16
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR+ KV L+FTAP E G+K+Y LYFM DSYLGCDQEY F+VDVKG+ D
Sbjct: 2108 QLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGAGD 2167
>gb|AAL31915.1|AF419583_1 At1g20960/F9H16_5 [Arabidopsis thaliana] gi|21360465|gb|AAM47348.1|
At1g20960/F9H16_5 [Arabidopsis thaliana]
Length = 569
Score = 90.1 bits (222), Expect = 5e-16
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -3
Query: 198 QLLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DD 19
QLLAIKRVSLQR+ KV L+FTAP E G+K+Y LYFM DSYLGCDQEY F+VDVKG+ D
Sbjct: 506 QLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGAGD 565
>ref|XP_009346826.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Pyrus x bretschneideri]
Length = 2179
Score = 89.7 bits (221), Expect = 7e-16
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = -3
Query: 195 LLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DDG 16
LLAIKRVSLQRR+KV L F AP E G+K+Y+LYFM DSYLGCDQEY FT+D+K A D
Sbjct: 2115 LLAIKRVSLQRRAKVKLEFAAPTEPGEKSYILYFMCDSYLGCDQEYDFTLDIKDAAGPDD 2174
Query: 15 D 13
D
Sbjct: 2175 D 2175
>ref|XP_008388784.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Malus domestica]
Length = 2180
Score = 89.7 bits (221), Expect = 7e-16
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = -3
Query: 195 LLAIKRVSLQRRSKVPLNFTAPVEVGKKAYMLYFMSDSYLGCDQEYGFTVDVKGTA*DDG 16
LLAIKRVSLQRR+KV L F AP E G+K+Y+LYFM DSYLGCDQEY FT+D+K A D
Sbjct: 2116 LLAIKRVSLQRRAKVKLEFAAPAEPGEKSYILYFMCDSYLGCDQEYDFTLDIKDAAGPDD 2175
Query: 15 D 13
D
Sbjct: 2176 D 2176