BLASTX nr result

ID: Cinnamomum25_contig00021164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00021164
         (231 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010276861.1| PREDICTED: transketolase, chloroplastic [Nel...    67   5e-09
ref|XP_010264166.1| PREDICTED: transketolase, chloroplastic [Nel...    63   9e-08

>ref|XP_010276861.1| PREDICTED: transketolase, chloroplastic [Nelumbo nucifera]
          Length = 744

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 40/76 (52%), Positives = 48/76 (63%)
 Frame = -3

Query: 229 SHHGSADRADPAAALPGFRLSNLAGRSFESSSLRMAHRLRPSIHRALPRATVRAAAVEAL 50
           +H+GS        ALPGF LS LAGR  + SS  +      S  R   R+ VRAAAVE L
Sbjct: 19  THNGSTTTHSDHLALPGFSLSTLAGRGIKLSSPSLCPA--GSRKRVNSRSAVRAAAVETL 76

Query: 49  EKTETSMVEKSVNTIR 2
           +KTETS+VEKS+NTIR
Sbjct: 77  DKTETSLVEKSINTIR 92


>ref|XP_010264166.1| PREDICTED: transketolase, chloroplastic [Nelumbo nucifera]
          Length = 747

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 SHHGSADRA-DPAAALPGFRLSNLAGRSFESSSLRMAHRLRPSIHRALPRATVRAAAVEA 53
           +HHGS         +LPGF LS LAGR  +SSS   +  +  S  R   R+ VRAAAVE 
Sbjct: 19  AHHGSTTTTHSDRLSLPGFSLSTLAGRGIKSSS-SPSSLVVGSRKRVNSRSAVRAAAVET 77

Query: 52  LEKTETSMVEKSVNTIR 2
           L+KT+T++VE S+NTIR
Sbjct: 78  LDKTDTTLVENSINTIR 94


Top