BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00020876
         (415 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249926.1| PREDICTED: pentatricopeptide repeat-containi...   172   6e-41
ref|XP_004288824.2| PREDICTED: pentatricopeptide repeat-containi...   167   3e-39
ref|XP_010049948.1| PREDICTED: pentatricopeptide repeat-containi...   164   2e-38
ref|XP_010923860.1| PREDICTED: pentatricopeptide repeat-containi...   163   4e-38
emb|CBI28135.3| unnamed protein product [Vitis vinifera]              163   5e-38
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...   163   5e-38
gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi ...   162   6e-38
ref|XP_002866111.1| pentatricopeptide repeat-containing protein ...   162   6e-38
emb|CDY28642.1| BnaC09g32330D [Brassica napus]                        162   1e-37
ref|XP_008354513.1| PREDICTED: pentatricopeptide repeat-containi...   162   1e-37
ref|XP_008390139.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   162   1e-37
ref|XP_009120096.1| PREDICTED: pentatricopeptide repeat-containi...   161   1e-37
emb|CDY17355.1| BnaA10g09890D [Brassica napus]                        161   1e-37
gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica...   161   1e-37
ref|XP_007013304.1| Tetratricopeptide repeat (TPR)-like superfam...   160   2e-37
ref|XP_007013303.1| Tetratricopeptide repeat (TPR)-like superfam...   160   2e-37
gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobulari...   160   2e-37
gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus...   160   3e-37
gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium...   160   4e-37
ref|XP_009371415.1| PREDICTED: pentatricopeptide repeat-containi...   159   5e-37

>ref|XP_010249926.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic [Nelumbo nucifera]
          Length = 855

 Score =  172 bits (437), Expect = 6e-41
 Identities = 90/137 (65%), Positives = 102/137 (74%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F+ MPERNVVAWNSMIVG+V NG+NEE MEVF +MRVE IEPTRV              +
Sbjct: 243 FNLMPERNVVAWNSMIVGYVQNGLNEETMEVFYNMRVEGIEPTRVTIASFLSAAANLDAI 302

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EGRQ HAIAVL+GLELDNILG+S INFY+KVG IEDAE           VTWNLLIS Y
Sbjct: 303 EEGRQVHAIAVLSGLELDNILGTSFINFYAKVGKIEDAELIFSRMNERDVVTWNLLISSY 362

Query: 55  VQDGQVDNALEMCHQMR 5
           VQDGQV+ AL++CHQMR
Sbjct: 363 VQDGQVETALDICHQMR 379



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 44/138 (31%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  M ER+VV WN +I  +V +G  E A+++   MR E++    V              +
Sbjct: 344 FSRMNERDVVTWNLLISSYVQDGQVETALDICHQMRSENLRFDSVTLASILSAFADSSNI 403

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G+ GH   + N    D ++ SS+IN Y+K G IE A            V WN LI+ Y
Sbjct: 404 KLGKVGHCYCIKNNFVSDVVVSSSIINMYAKCGKIEYARRVFNTSMQSDLVLWNTLIAAY 463

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL++ +QM+L
Sbjct: 464 AELGLSGEALKLFYQMQL 481



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 38/138 (27%), Positives = 61/138 (44%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  + ++NV +W +MI  +   G NEEA+   C+M      P                 +
Sbjct: 142 FQRLRKQNVFSWAAMIGLYCRIGCNEEALLGVCEMHENGYFPDNYVVPNALKACSALQLV 201

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G+  H   +  G +    + SSL++ Y K G +EDA            V WN +I GY
Sbjct: 202 KFGKGVHGYVIKMGFDCCVFVASSLVDMYGKCGVLEDARKVFNLMPERNVVAWNSMIVGY 261

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ+G  +  +E+ + MR+
Sbjct: 262 VQNGLNEETMEVFYNMRV 279


>ref|XP_004288824.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 864

 Score =  167 bits (422), Expect = 3e-39
 Identities = 85/138 (61%), Positives = 99/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDEM ERNV+ WNSMIV +V NG+NEEA+ VFCDMR E +EPT V              +
Sbjct: 276 FDEMGERNVITWNSMIVSYVQNGLNEEAIRVFCDMRGEGVEPTHVTVSSFLSASANLGAM 335

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+QGHA+AV++GLEL+ ILGSS+INFYSKVG IEDAE           VTWNLLISGY
Sbjct: 336 EEGKQGHALAVVSGLELNTILGSSVINFYSKVGLIEDAEIVFSRMNEKDVVTWNLLISGY 395

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G+VD ALEMC  MRL
Sbjct: 396 VQIGEVDKALEMCRLMRL 413



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 41/138 (29%), Positives = 68/138 (49%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  M E++VV WN +I G+V  G  ++A+E+   MR+E++    V              L
Sbjct: 377 FSRMNEKDVVTWNLLISGYVQIGEVDKALEMCRLMRLENLRFDSVTLASLMSAFADTRNL 436

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++ H   + N LE D ++ SS+++ Y+K   I+ A            V WN L++ Y
Sbjct: 437 KFGKEAHCYCIRNNLEDDVVVASSIVDLYAKCEKIDSARRAFESATTGDLVLWNTLLAAY 496

Query: 55  VQDGQVDNALEMCHQMRL 2
              G    AL++ +QM+L
Sbjct: 497 AGLGHSGEALKLFYQMQL 514



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 37/132 (28%), Positives = 61/132 (46%)
 Frame = -1

Query: 400 ERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXLDEGRQ 221
           E N+V W +MI G   NG + +A++ FC M+   I+P  V              L  GR 
Sbjct: 553 EPNLVTWTTMISGLADNGFSHDAIQAFCRMQEAGIKPNVVSIVCVLKACIEIASLQNGRV 612

Query: 220 GHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGYVQDGQ 41
            H   + + L L   + +SL++ Y+K G +E+A+             +N +IS Y   GQ
Sbjct: 613 MHGYLIRHFLYLSTPVATSLVDVYAKCGNVEEAKRVFVMVSDKELPIYNAMISSYALHGQ 672

Query: 40  VDNALEMCHQMR 5
              AL +  +++
Sbjct: 673 AVEALALYRRLK 684


>ref|XP_010049948.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic [Eucalyptus grandis]
           gi|629118103|gb|KCW82778.1| hypothetical protein
           EUGRSUZ_C04152 [Eucalyptus grandis]
          Length = 853

 Score =  164 bits (415), Expect = 2e-38
 Identities = 82/138 (59%), Positives = 100/138 (72%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD +PERN VAWNSMIV +V NGMNEEA++ F DMRVE IEPTRV              +
Sbjct: 244 FDSIPERNAVAWNSMIVSYVQNGMNEEAIDTFYDMRVEGIEPTRVTVSSFLSASTNIGAI 303

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           DEG QGHAI+VL GLELD+ILG+S++NFY+K G +EDAE           VTWNLLISGY
Sbjct: 304 DEGMQGHAISVLAGLELDDILGTSILNFYAKSGLMEDAELVFDRMVERDVVTWNLLISGY 363

Query: 55  VQDGQVDNALEMCHQMRL 2
           +Q+G V+ ALEMC++M+L
Sbjct: 364 IQNGHVERALEMCNEMKL 381



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/138 (30%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M ER+VV WN +I G++ NG  E A+E+  +M++E +    V              +
Sbjct: 345 FDRMVERDVVTWNLLISGYIQNGHVERALEMCNEMKLEHLRFDSVTLASLLSASAKTQDI 404

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++ H   + N LE D ++ SS+   Y+    IE A            + WN LI+ Y
Sbjct: 405 RLGKEAHGYCIRNNLEDDVVVSSSITEMYAACDRIESARDVFDFTRRRDLIMWNTLIAAY 464

Query: 55  VQDGQVDNALEMCHQMRL 2
              G  D  L++ +QM+L
Sbjct: 465 ADLGASDEVLKLFYQMQL 482



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 39/138 (28%), Positives = 62/138 (44%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  +  RNV +W +++      G+ EEA+  +C+M+ E + P                 +
Sbjct: 143 FCRLRTRNVFSWAAVVGLRCRAGLCEEALIGYCEMQEEGVSPDNFVVPNAVKACGTLMWI 202

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G+  H      GL     + SSLI+FY K G +EDA            V WN +I  Y
Sbjct: 203 GFGKGVHGYVEKMGLGGCVFVASSLIDFYGKCGLLEDARKVFDSIPERNAVAWNSMIVSY 262

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ+G  + A++  + MR+
Sbjct: 263 VQNGMNEEAIDTFYDMRV 280


>ref|XP_010923860.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic [Elaeis guineensis]
          Length = 860

 Score =  163 bits (413), Expect = 4e-38
 Identities = 84/137 (61%), Positives = 100/137 (72%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F+ MPERNVV WNSM+VG+V+NG ++EA+E+F DMR E I+PTRV              L
Sbjct: 244 FEYMPERNVVTWNSMLVGYVYNGRDQEAVELFYDMRNEGIQPTRVSIASFLSASANLQAL 303

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           DEGRQGHAIAVL GLELDNILGSS++NFY K+G IE+AE           VTWNLLISGY
Sbjct: 304 DEGRQGHAIAVLCGLELDNILGSSIMNFYCKLGLIEEAEFMFSQMADMDVVTWNLLISGY 363

Query: 55  VQDGQVDNALEMCHQMR 5
           VQDGQ++ AL +C QMR
Sbjct: 364 VQDGQIEKALYICCQMR 380



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 43/138 (31%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F +M + +VV WN +I G+V +G  E+A+ + C MR        V              L
Sbjct: 345 FSQMADMDVVTWNLLISGYVQDGQIEKALYICCQMRKRKFRFDSVTLASILSACADSWML 404

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           + G+ GH   + N  E D ++ S L + YS+ G I+ A+           + WN LIS Y
Sbjct: 405 ELGKVGHGYCIRNNFESDVVIASILADLYSRCGRIDYAQRVFNATTSRDLILWNTLISAY 464

Query: 55  VQDGQVDNALEMCHQMRL 2
            Q G    AL++ +QM+L
Sbjct: 465 AQYGLSGEALKIFYQMQL 482


>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  163 bits (412), Expect = 5e-38
 Identities = 86/137 (62%), Positives = 96/137 (70%)
 Frame = -1

Query: 415  FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
            FD M E+NVV WNSMIVG+V NG+N+EA++VF DMRVE IEPTRV              L
Sbjct: 1335 FDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDAL 1394

Query: 235  DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             EG+QGHAIA+LN L+LDNILGSS+INFYSKVG IEDAE           VTWNLLIS Y
Sbjct: 1395 IEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSY 1454

Query: 55   VQDGQVDNALEMCHQMR 5
            VQ  QV  AL MCH MR
Sbjct: 1455 VQHHQVGKALNMCHLMR 1471



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 38/137 (27%), Positives = 65/137 (47%)
 Frame = -1

Query: 415  FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
            F  M E++VV WN +I  +V +    +A+ +   MR E++    V              +
Sbjct: 1436 FSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNI 1495

Query: 235  DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
              G++GH   +   LE D ++ +S+I+ Y+K   I+DA            V WN L++ Y
Sbjct: 1496 KLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAY 1555

Query: 55   VQDGQVDNALEMCHQMR 5
             Q G    AL++ +QM+
Sbjct: 1556 AQVGLSGEALKLFYQMQ 1572



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 36/138 (26%), Positives = 61/138 (44%)
 Frame = -1

Query: 415  FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
            F  +  RNV +W +++      G +E+A+  F +M+   + P                 +
Sbjct: 1234 FHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLI 1293

Query: 235  DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
              G+  H   +  G      + SSL++ Y K G +EDA            VTWN +I GY
Sbjct: 1294 GLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGY 1353

Query: 55   VQDGQVDNALEMCHQMRL 2
            VQ+G    A+++ + MR+
Sbjct: 1354 VQNGLNQEAIDVFYDMRV 1371


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic [Vitis vinifera]
          Length = 858

 Score =  163 bits (412), Expect = 5e-38
 Identities = 86/137 (62%), Positives = 96/137 (70%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M E+NVV WNSMIVG+V NG+N+EA++VF DMRVE IEPTRV              L
Sbjct: 240 FDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDAL 299

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
            EG+QGHAIA+LN L+LDNILGSS+INFYSKVG IEDAE           VTWNLLIS Y
Sbjct: 300 IEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSY 359

Query: 55  VQDGQVDNALEMCHQMR 5
           VQ  QV  AL MCH MR
Sbjct: 360 VQHHQVGKALNMCHLMR 376



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 38/137 (27%), Positives = 65/137 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  M E++VV WN +I  +V +    +A+ +   MR E++    V              +
Sbjct: 341 FSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNI 400

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++GH   +   LE D ++ +S+I+ Y+K   I+DA            V WN L++ Y
Sbjct: 401 KLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAY 460

Query: 55  VQDGQVDNALEMCHQMR 5
            Q G    AL++ +QM+
Sbjct: 461 AQVGLSGEALKLFYQMQ 477



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 36/138 (26%), Positives = 61/138 (44%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  +  RNV +W +++      G +E+A+  F +M+   + P                 +
Sbjct: 139 FHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLI 198

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G+  H   +  G      + SSL++ Y K G +EDA            VTWN +I GY
Sbjct: 199 GLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGY 258

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ+G    A+++ + MR+
Sbjct: 259 VQNGLNQEAIDVFYDMRV 276


>gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi arvense]
          Length = 732

 Score =  162 bits (411), Expect = 6e-38
 Identities = 81/138 (58%), Positives = 99/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+++VG+V NGMNEEA+ +F DMR E +EPTRV              +
Sbjct: 211 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGI 270

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+Q HAIAV+NGLELDNILG+S++NFY KVG IE AE           VTWNLLISGY
Sbjct: 271 EEGKQSHAIAVVNGLELDNILGTSILNFYCKVGLIECAEMIFDRMVEKDVVTWNLLISGY 330

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G V++A+ MC  MRL
Sbjct: 331 VQQGLVEDAIRMCQSMRL 348



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 39/138 (28%), Positives = 69/138 (50%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M E++VV WN +I G+V  G+ E+A+ +   MR+E+++   V               
Sbjct: 312 FDRMVEKDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSAAARTQDS 371

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++  +  + + LE D +L S+ ++ Y+K G I DA+           + WN L+  Y
Sbjct: 372 KLGKEVQSYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLGAY 431

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + ++M+L
Sbjct: 432 AESGLSGEALRLFYEMQL 449


>ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311946|gb|EFH42370.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 829

 Score =  162 bits (411), Expect = 6e-38
 Identities = 81/138 (58%), Positives = 99/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+++VG+V NGMNEEA+ +F DMR E +EPTRV              +
Sbjct: 231 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGV 290

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+Q HAIA++NGLELDNILG+SL+NFY KVG IE AE           VTWNL+ISGY
Sbjct: 291 EEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGY 350

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G V+NA+ MC  MRL
Sbjct: 351 VQQGLVENAIYMCQLMRL 368



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 37/138 (26%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M +++VV WN +I G+V  G+ E A+ +   MR+E ++   V              L
Sbjct: 332 FDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNL 391

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++     + +  E D +L S++++ Y+K G I DA+           + WN L++ Y
Sbjct: 392 KLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAY 451

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G     L + + M+L
Sbjct: 452 AESGLSGEGLRLFYGMQL 469



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/137 (29%), Positives = 58/137 (42%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F ++  RNV +W ++I      G+ E A+  F +M   +I P                  
Sbjct: 130 FTKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWS 189

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             GR  H   V  GLE    + SSL + Y K G ++DA            V WN L+ GY
Sbjct: 190 RFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 249

Query: 55  VQDGQVDNALEMCHQMR 5
           VQ+G  + A+ +   MR
Sbjct: 250 VQNGMNEEAIRLFSDMR 266


>emb|CDY28642.1| BnaC09g32330D [Brassica napus]
          Length = 824

 Score =  162 bits (409), Expect = 1e-37
 Identities = 79/138 (57%), Positives = 99/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+++VG+V NGMNEEA+ + CDMR E +EPTRV              +
Sbjct: 223 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGV 282

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+Q HA+AV+NGLELDNILG+S++NFY KVG I+ AE           VTWNLLISGY
Sbjct: 283 EEGKQSHAVAVVNGLELDNILGTSILNFYCKVGLIDYAEMVFDRMIGKDVVTWNLLISGY 342

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G V++A+ MC  MRL
Sbjct: 343 VQQGLVEDAIRMCQLMRL 360



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 36/138 (26%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M  ++VV WN +I G+V  G+ E+A+ +   MR+E ++   V               
Sbjct: 324 FDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSAAARTQNS 383

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++     + +  E D +L S++++ Y+K G I DA+           + WN L++  
Sbjct: 384 KLGKEVQCYCIRHSFESDIVLASAVVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAC 443

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + ++M+L
Sbjct: 444 AESGLSGEALRLFYEMQL 461



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/137 (27%), Positives = 59/137 (43%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F ++  RNV +W ++I      G+ E A+  F +M  ++I P                  
Sbjct: 122 FSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWS 181

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             GR  H     +GL+    + SSL + Y K G ++DA            V WN L+ GY
Sbjct: 182 GFGRGLHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 241

Query: 55  VQDGQVDNALEMCHQMR 5
           VQ+G  + A+ +   MR
Sbjct: 242 VQNGMNEEAIRLMCDMR 258


>ref|XP_008354513.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Malus domestica]
          Length = 838

 Score =  162 bits (409), Expect = 1e-37
 Identities = 85/138 (61%), Positives = 98/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD MP+RN VAWNSMIVG+V NG+NEEA+EVF +MR E +EPT+V              L
Sbjct: 244 FDGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASXNLGAL 303

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
            +G+QGHAIAV+ G+E+   LGSSLINFYSKVG IEDAE           VTWNLLISGY
Sbjct: 304 QDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGY 363

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G+VD AL MCH MRL
Sbjct: 364 VQIGEVDKALNMCHLMRL 381



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 38/138 (27%), Positives = 67/138 (48%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  M E++VV WN +I G+V  G  ++A+ +   MR+E++    V              L
Sbjct: 345 FSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNL 404

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++GH   + N LE D ++ SS+++ Y+K   I  A            + WN +++ +
Sbjct: 405 KLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAF 464

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + +QM+L
Sbjct: 465 AELGHSGEALNLFYQMQL 482



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 36/131 (27%), Positives = 60/131 (45%)
 Frame = -1

Query: 397 RNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXLDEGRQG 218
           +NV +W ++I  +   G  +EA+  F +M+   + P                 +  G+  
Sbjct: 149 KNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVV 208

Query: 217 HAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGYVQDGQV 38
           H + V  G      + SSL++ Y K G +EDA            V WN +I GYVQ+G  
Sbjct: 209 HGLVVKLGCGGCVFVASSLVDMYGKCGEVEDARKVFDGMPQRNAVAWNSMIVGYVQNGLN 268

Query: 37  DNALEMCHQMR 5
           + A+E+ ++MR
Sbjct: 269 EEAIEVFYEMR 279


>ref|XP_008390139.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55740, chloroplastic [Malus domestica]
          Length = 838

 Score =  162 bits (409), Expect = 1e-37
 Identities = 85/138 (61%), Positives = 98/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD MP+RN VAWNSMIVG+V NG+NEEA+EVF +MR E +EPT+V              L
Sbjct: 244 FDGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASXNLGAL 303

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
            +G+QGHAIAV+ G+E+   LGSSLINFYSKVG IEDAE           VTWNLLISGY
Sbjct: 304 QDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGY 363

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G+VD AL MCH MRL
Sbjct: 364 VQIGEVDKALNMCHLMRL 381



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 38/138 (27%), Positives = 67/138 (48%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  M E++VV WN +I G+V  G  ++A+ +   MR+E++    V              L
Sbjct: 345 FSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNL 404

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++GH   + N LE D ++ SS+++ Y+K   I  A            + WN +++ +
Sbjct: 405 KLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAF 464

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + +QM+L
Sbjct: 465 AELGHSGEALNLFYQMQL 482


>ref|XP_009120096.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic [Brassica rapa]
          Length = 824

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/138 (57%), Positives = 99/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+++VG+V NGMNEEA+ + CDMR E +EPTRV              +
Sbjct: 223 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGV 282

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+Q HA+AV+NGLELDNILG+S++NFY KVG +E AE           VTWNLLISGY
Sbjct: 283 EEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGY 342

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G V++A+ MC  MRL
Sbjct: 343 VQQGLVEDAIRMCKLMRL 360



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 37/138 (26%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M  ++VV WN +I G+V  G+ E+A+ +   MR+E ++   V               
Sbjct: 324 FDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNS 383

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++     + +  E D +L S+ ++ Y+K G I DA+           + WN L++ Y
Sbjct: 384 KLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAY 443

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + ++M+L
Sbjct: 444 AESGLSGEALRLFYEMQL 461



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/137 (27%), Positives = 59/137 (43%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F ++  RNV +W ++I      G+ E A+  F +M  ++I P                  
Sbjct: 122 FSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWS 181

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             GR  H     +GL+    + SSL + Y K G ++DA            V WN L+ GY
Sbjct: 182 GFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 241

Query: 55  VQDGQVDNALEMCHQMR 5
           VQ+G  + A+ +   MR
Sbjct: 242 VQNGMNEEAIRLMCDMR 258


>emb|CDY17355.1| BnaA10g09890D [Brassica napus]
          Length = 824

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/138 (57%), Positives = 99/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+++VG+V NGMNEEA+ + CDMR E +EPTRV              +
Sbjct: 223 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGV 282

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+Q HA+AV+NGLELDNILG+S++NFY KVG +E AE           VTWNLLISGY
Sbjct: 283 EEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGY 342

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G V++A+ MC  MRL
Sbjct: 343 VQQGLVEDAIRMCKLMRL 360



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 37/138 (26%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M  ++VV WN +I G+V  G+ E+A+ +   MR+E ++   V               
Sbjct: 324 FDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNS 383

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++     + +  E D +L S+ ++ Y+K G I DA+           + WN L++ Y
Sbjct: 384 KLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAY 443

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + ++M+L
Sbjct: 444 AESGLSGEALRLFYEMQL 461



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/137 (27%), Positives = 59/137 (43%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F ++  RNV +W ++I      G+ E A+  F +M  ++I P                  
Sbjct: 122 FSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWR 181

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             GR  H     +GL+    + SSL + Y K G ++DA            V WN L+ GY
Sbjct: 182 GFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 241

Query: 55  VQDGQVDNALEMCHQMR 5
           VQ+G  + A+ +   MR
Sbjct: 242 VQNGMNEEAIRLMCDMR 258


>gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
          Length = 788

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/138 (57%), Positives = 99/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+++VG+V NGMNEEA+ + CDMR E +EPTRV              +
Sbjct: 187 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGV 246

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+Q HA+AV+NGLELDNILG+S++NFY KVG +E AE           VTWNLLISGY
Sbjct: 247 EEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGY 306

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G V++A+ MC  MRL
Sbjct: 307 VQQGLVEDAIRMCKLMRL 324



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 37/138 (26%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M  ++VV WN +I G+V  G+ E+A+ +   MR+E ++   V               
Sbjct: 288 FDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNS 347

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++     + +  E D +L S+ ++ Y+K G I DA+           + WN L++ Y
Sbjct: 348 KLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAY 407

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + ++M+L
Sbjct: 408 AESGLSGEALRLFYEMQL 425



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/137 (27%), Positives = 59/137 (43%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F ++  RNV +W ++I      G+ E A+  F +M  ++I P                  
Sbjct: 86  FSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWR 145

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             GR  H     +GL+    + SSL + Y K G ++DA            V WN L+ GY
Sbjct: 146 GFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 205

Query: 55  VQDGQVDNALEMCHQMR 5
           VQ+G  + A+ +   MR
Sbjct: 206 VQNGMNEEAIRLMCDMR 222


>ref|XP_007013304.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508783667|gb|EOY30923.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 779

 Score =  160 bits (406), Expect = 2e-37
 Identities = 82/138 (59%), Positives = 98/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M ERNV+AWNSMIVG++ NG NEEA+ VF DMR+E +EPT+V              +
Sbjct: 184 FDGMVERNVIAWNSMIVGYMQNGRNEEAIGVFYDMRMEGVEPTQVSISSFLSASANLGAI 243

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           DEG+QGHAIAV+ GLELDNILGSS+INFYSK+G IEDAE           VTWNL+IS Y
Sbjct: 244 DEGKQGHAIAVVGGLELDNILGSSVINFYSKLGLIEDAELVFVRMLVKDVVTWNLMISSY 303

Query: 55  VQDGQVDNALEMCHQMRL 2
           V+ G ++ AL MCH MRL
Sbjct: 304 VRCGLIEKALNMCHLMRL 321



 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 39/138 (28%), Positives = 69/138 (50%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  M  ++VV WN MI  +V  G+ E+A+ +   MR+E++    V              +
Sbjct: 285 FVRMLVKDVVTWNLMISSYVRCGLIEKALNMCHLMRLENLRFDCVTLSSILTAAANSSSI 344

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           + G++GH   + N L+ D ++ SS+++ Y+K G I+ A            + WN L++ Y
Sbjct: 345 EIGKEGHCYCIRNNLQSDVVVSSSIVDMYAKCGRIDCARQVFSSTTNKDVILWNTLLASY 404

Query: 55  VQDGQVDNALEMCHQMRL 2
              G    AL++ +QM+L
Sbjct: 405 ADVGHSGEALKLFYQMQL 422



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/123 (25%), Positives = 56/123 (45%)
 Frame = -1

Query: 394 NVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXLDEGRQGH 215
           N++ W ++I G  HNG  +E++++F  M+   I+P  +              L  GR  H
Sbjct: 463 NLITWTTLITGLAHNGFQDESVQIFQKMQESGIKPNTISISSVLSACTNVTSLQHGRAIH 522

Query: 214 AIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGYVQDGQVD 35
             A+ + L+    + ++L+  Y+K G++  A+             +N +IS Y   GQ  
Sbjct: 523 GYAIRHDLDSQISVSTALVGMYAKCGYLSQAKRVFDNTLSKELPVYNAMISCYALHGQAG 582

Query: 34  NAL 26
            AL
Sbjct: 583 EAL 585


>ref|XP_007013303.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508783666|gb|EOY30922.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 836

 Score =  160 bits (406), Expect = 2e-37
 Identities = 82/138 (59%), Positives = 98/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M ERNV+AWNSMIVG++ NG NEEA+ VF DMR+E +EPT+V              +
Sbjct: 241 FDGMVERNVIAWNSMIVGYMQNGRNEEAIGVFYDMRMEGVEPTQVSISSFLSASANLGAI 300

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           DEG+QGHAIAV+ GLELDNILGSS+INFYSK+G IEDAE           VTWNL+IS Y
Sbjct: 301 DEGKQGHAIAVVGGLELDNILGSSVINFYSKLGLIEDAELVFVRMLVKDVVTWNLMISSY 360

Query: 55  VQDGQVDNALEMCHQMRL 2
           V+ G ++ AL MCH MRL
Sbjct: 361 VRCGLIEKALNMCHLMRL 378



 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 39/138 (28%), Positives = 69/138 (50%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  M  ++VV WN MI  +V  G+ E+A+ +   MR+E++    V              +
Sbjct: 342 FVRMLVKDVVTWNLMISSYVRCGLIEKALNMCHLMRLENLRFDCVTLSSILTAAANSSSI 401

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           + G++GH   + N L+ D ++ SS+++ Y+K G I+ A            + WN L++ Y
Sbjct: 402 EIGKEGHCYCIRNNLQSDVVVSSSIVDMYAKCGRIDCARQVFSSTTNKDVILWNTLLASY 461

Query: 55  VQDGQVDNALEMCHQMRL 2
              G    AL++ +QM+L
Sbjct: 462 ADVGHSGEALKLFYQMQL 479



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/123 (25%), Positives = 56/123 (45%)
 Frame = -1

Query: 394 NVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXLDEGRQGH 215
           N++ W ++I G  HNG  +E++++F  M+   I+P  +              L  GR  H
Sbjct: 520 NLITWTTLITGLAHNGFQDESVQIFQKMQESGIKPNTISISSVLSACTNVTSLQHGRAIH 579

Query: 214 AIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGYVQDGQVD 35
             A+ + L+    + ++L+  Y+K G++  A+             +N +IS Y   GQ  
Sbjct: 580 GYAIRHDLDSQISVSTALVGMYAKCGYLSQAKRVFDNTLSKELPVYNAMISCYALHGQAG 639

Query: 34  NAL 26
            AL
Sbjct: 640 EAL 642



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/138 (26%), Positives = 60/138 (43%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  +   NV +W ++I      G+NEEA+  F +M+     P                 L
Sbjct: 140 FSRLRVTNVFSWAAIIGLKCRVGLNEEALMAFSEMQENGFFPDNFVVPNALKACGALLWL 199

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G+  H      G +    + SSLI+ Y K G +EDA            + WN +I GY
Sbjct: 200 GYGKGVHGYVAKVGFDGCVFVASSLIDMYGKCGALEDARKVFDGMVERNVIAWNSMIVGY 259

Query: 55  VQDGQVDNALEMCHQMRL 2
           +Q+G+ + A+ + + MR+
Sbjct: 260 MQNGRNEEAIGVFYDMRM 277


>gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobularia maritima]
          Length = 734

 Score =  160 bits (406), Expect = 2e-37
 Identities = 79/138 (57%), Positives = 99/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+M+VG+V NGMNEEA+ +  DM+ E IEPTRV              +
Sbjct: 212 FDEIPERNVVAWNAMMVGYVQNGMNEEAIRLLSDMKEEGIEPTRVTVSMCLSASANIGGI 271

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+Q HA+A++NGLE+DNILG+SL+NFY KVG IE AE           VTWNLLISGY
Sbjct: 272 EEGKQSHAVAIVNGLEMDNILGTSLLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGY 331

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G V+NA++MC  MR+
Sbjct: 332 VQQGLVENAIDMCRLMRV 349



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 37/138 (26%), Positives = 67/138 (48%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M  ++VV WN +I G+V  G+ E A+++   MRVE+++   V              L
Sbjct: 313 FDRMIGKDVVTWNLLISGYVQQGLVENAIDMCRLMRVENLKFDCVTLSTLMSVAARTRDL 372

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++     + +  E D  L S+ ++ Y++ G + DA+           + WN L++ Y
Sbjct: 373 KLGKEVLCYCIRHSFESDIGLASTAVDMYAECGSVVDAKKVFDATVQKDLILWNALLAAY 432

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + ++M+L
Sbjct: 433 TESGHSGEALRLFYEMQL 450



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/137 (25%), Positives = 58/137 (42%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  +  RNV +W +++      G +E+A+  F +M   +I P                  
Sbjct: 111 FSRLRIRNVFSWAAIVGVRSRIGFSEDALTGFVEMLETEISPDNFVVPNVCKACGVLRWS 170

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             GR  H   + + L     + SSL + Y K GF++DA            V WN ++ GY
Sbjct: 171 RFGRSVHGFVMKSRLHDCVFVASSLADMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGY 230

Query: 55  VQDGQVDNALEMCHQMR 5
           VQ+G  + A+ +   M+
Sbjct: 231 VQNGMNEEAIRLLSDMK 247


>gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
          Length = 806

 Score =  160 bits (405), Expect = 3e-37
 Identities = 79/138 (57%), Positives = 98/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+++VG+V NGMNEEA+ + CDMR E +EPTRV              +
Sbjct: 206 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGV 265

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
            EG+Q HA+AV+NGLE+DNILG+S++NFY KVG IE AE           VTWNLLISGY
Sbjct: 266 GEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGY 325

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G V++A+ MC  MRL
Sbjct: 326 VQQGLVEDAIRMCKLMRL 343



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 38/138 (27%), Positives = 66/138 (47%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD M  ++VV WN +I G+V  G+ E+A+ +   MR+E ++   V               
Sbjct: 307 FDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNS 366

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++     + +  E D  L S++I+ Y+K G I DA+           + WN L++ Y
Sbjct: 367 KLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAY 426

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + ++M+L
Sbjct: 427 AESGLSGEALRLFYEMQL 444



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F ++  RNV +W ++I      G+ E A+  F +M  ++I P                  
Sbjct: 104 FSKLRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWS 163

Query: 235 DEGRQGHAIAVLNGLELDNI-LGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISG 59
             GR  H     +GL  D + + SSL + Y K G ++DA            V WN L+ G
Sbjct: 164 GFGRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVG 223

Query: 58  YVQDGQVDNALEMCHQMR 5
           YVQ+G  + A+ +   MR
Sbjct: 224 YVQNGMNEEAIRLMCDMR 241


>gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
          Length = 805

 Score =  160 bits (404), Expect = 4e-37
 Identities = 81/138 (58%), Positives = 98/138 (71%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FDE+PERNVVAWN+++VG+V NGMNEEA+ +  DMR E IEPTRV              +
Sbjct: 209 FDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMGGI 268

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           +EG+Q HAIA++NGLELDNILG+S++NFY KVG IE AE           VTWNLLISGY
Sbjct: 269 EEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRIIGKDIVTWNLLISGY 328

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G VD+A+ MC  MRL
Sbjct: 329 VQQGLVDDAMYMCKLMRL 346



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 36/138 (26%), Positives = 67/138 (48%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD +  +++V WN +I G+V  G+ ++AM +   MR+E++    V              L
Sbjct: 310 FDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNL 369

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
           + G++    ++ +  E + +L SS ++ Y+K G I DA+           + WN L++ Y
Sbjct: 370 NLGKEVQCYSIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAY 429

Query: 55  VQDGQVDNALEMCHQMRL 2
              G    AL++ + M L
Sbjct: 430 ADSGLSGEALKLFYDMLL 447


>ref|XP_009371415.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic [Pyrus x bretschneideri]
          Length = 838

 Score =  159 bits (403), Expect = 5e-37
 Identities = 84/138 (60%), Positives = 96/138 (69%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           FD MPERN VAWNSMIVG+V NG+NEEA+EVF +MR E +EPT+V              L
Sbjct: 244 FDGMPERNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTISSFLSASANLGAL 303

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
            +G+QGHAIAV+ G+E+   LGSSLINFYSKVG IEDAE           VTWNLLISGY
Sbjct: 304 QDGKQGHAIAVICGVEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGY 363

Query: 55  VQDGQVDNALEMCHQMRL 2
           VQ G+VD AL MC  MRL
Sbjct: 364 VQIGEVDKALNMCRLMRL 381



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/138 (28%), Positives = 67/138 (48%)
 Frame = -1

Query: 415 FDEMPERNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXL 236
           F  M E++VV WN +I G+V  G  ++A+ +   MR+E++    V              L
Sbjct: 345 FSRMLEKDVVTWNLLISGYVQIGEVDKALNMCRLMRLENLRFDSVCLATLMSAFADKRNL 404

Query: 235 DEGRQGHAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGY 56
             G++GH   V N LE D ++ SS+++ Y+K   I  A            + WN +++ +
Sbjct: 405 KLGKEGHCYCVRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSIMKDLILWNTMLAAF 464

Query: 55  VQDGQVDNALEMCHQMRL 2
            + G    AL + +QM+L
Sbjct: 465 AELGHSGEALNLFYQMQL 482



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/131 (28%), Positives = 61/131 (46%)
 Frame = -1

Query: 397 RNVVAWNSMIVGHVHNGMNEEAMEVFCDMRVEDIEPTRVXXXXXXXXXXXXXXLDEGRQG 218
           +NV +W ++I  +   G ++EA+  F +MR   + P                 +  G+  
Sbjct: 149 KNVFSWAAVIGLNCRKGFHQEALLGFREMRENGLLPDNFVLPNVLKACGGLEWIRIGKVV 208

Query: 217 HAIAVLNGLELDNILGSSLINFYSKVGFIEDAEHXXXXXXXXXXVTWNLLISGYVQDGQV 38
           H + V  G      + SSL++ Y K G +EDA            V WN +I GYVQ+G  
Sbjct: 209 HGLVVKLGCGGCVFVASSLVDMYGKCGEVEDARKVFDGMPERNAVAWNSMIVGYVQNGLN 268

Query: 37  DNALEMCHQMR 5
           + A+E+ ++MR
Sbjct: 269 EEAIEVFYEMR 279