BLASTX nr result

ID: Cinnamomum25_contig00020666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00020666
         (227 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008452557.1| PREDICTED: THO complex subunit 5B [Cucumis m...    59   1e-06
ref|XP_004141378.1| PREDICTED: THO complex subunit 5B [Cucumis s...    59   1e-06
ref|XP_010269644.1| PREDICTED: THO complex subunit 5B [Nelumbo n...    58   2e-06

>ref|XP_008452557.1| PREDICTED: THO complex subunit 5B [Cucumis melo]
          Length = 818

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +3

Query: 3   RSFRGRDRRKMISWKEIECTPGYPC 77
           RSFRGRDRRKMISWK+IECTPGYPC
Sbjct: 794 RSFRGRDRRKMISWKDIECTPGYPC 818


>ref|XP_004141378.1| PREDICTED: THO complex subunit 5B [Cucumis sativus]
           gi|700200037|gb|KGN55195.1| hypothetical protein
           Csa_4G639830 [Cucumis sativus]
          Length = 815

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +3

Query: 3   RSFRGRDRRKMISWKEIECTPGYPC 77
           RSFRGRDRRKMISWK+IECTPGYPC
Sbjct: 791 RSFRGRDRRKMISWKDIECTPGYPC 815


>ref|XP_010269644.1| PREDICTED: THO complex subunit 5B [Nelumbo nucifera]
          Length = 814

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +3

Query: 3   RSFRGRDRRKMISWKEIECTPGYPC 77
           RSFRGRDRRKMISWK++ECTPGYPC
Sbjct: 790 RSFRGRDRRKMISWKDMECTPGYPC 814


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