BLASTX nr result
ID: Cinnamomum25_contig00020665
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum25_contig00020665 (228 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_008452557.1| PREDICTED: THO complex subunit 5B [Cucumis m... 58 2e-06 ref|XP_004141378.1| PREDICTED: THO complex subunit 5B [Cucumis s... 58 2e-06 ref|XP_010269644.1| PREDICTED: THO complex subunit 5B [Nelumbo n... 57 5e-06 >ref|XP_008452557.1| PREDICTED: THO complex subunit 5B [Cucumis melo] Length = 818 Score = 58.2 bits (139), Expect = 2e-06 Identities = 23/25 (92%), Positives = 25/25 (100%) Frame = -3 Query: 226 RSFRGRDRRRMISWKEIECTPGYPC 152 RSFRGRDRR+MISWK+IECTPGYPC Sbjct: 794 RSFRGRDRRKMISWKDIECTPGYPC 818 >ref|XP_004141378.1| PREDICTED: THO complex subunit 5B [Cucumis sativus] gi|700200037|gb|KGN55195.1| hypothetical protein Csa_4G639830 [Cucumis sativus] Length = 815 Score = 58.2 bits (139), Expect = 2e-06 Identities = 23/25 (92%), Positives = 25/25 (100%) Frame = -3 Query: 226 RSFRGRDRRRMISWKEIECTPGYPC 152 RSFRGRDRR+MISWK+IECTPGYPC Sbjct: 791 RSFRGRDRRKMISWKDIECTPGYPC 815 >ref|XP_010269644.1| PREDICTED: THO complex subunit 5B [Nelumbo nucifera] Length = 814 Score = 57.0 bits (136), Expect = 5e-06 Identities = 22/25 (88%), Positives = 25/25 (100%) Frame = -3 Query: 226 RSFRGRDRRRMISWKEIECTPGYPC 152 RSFRGRDRR+MISWK++ECTPGYPC Sbjct: 790 RSFRGRDRRKMISWKDMECTPGYPC 814