BLASTX nr result

ID: Cinnamomum25_contig00020454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00020454
         (436 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012076004.1| PREDICTED: pentatricopeptide repeat-containi...   102   8e-20
ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containi...    94   4e-17
ref|XP_010269888.1| PREDICTED: pentatricopeptide repeat-containi...    91   4e-16
ref|XP_002523226.1| pentatricopeptide repeat-containing protein,...    89   2e-15
ref|XP_006283664.1| hypothetical protein CARUB_v10004721mg [Caps...    89   2e-15
ref|XP_012438652.1| PREDICTED: pentatricopeptide repeat-containi...    88   2e-15
ref|NP_193153.3| pentatricopeptide repeat-containing protein [Ar...    88   2e-15
gb|AAU94392.1| At4g14170 [Arabidopsis thaliana] gi|55733761|gb|A...    88   2e-15
emb|CAB10196.1| hypothetical protein [Arabidopsis thaliana] gi|7...    88   2e-15
ref|XP_002868306.1| pentatricopeptide repeat-containing protein ...    88   3e-15
emb|CDY37924.1| BnaA06g18930D [Brassica napus]                         87   6e-15
ref|XP_006414782.1| hypothetical protein EUTSA_v10027059mg [Eutr...    87   6e-15
ref|XP_009150190.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
gb|ERM99083.1| hypothetical protein AMTR_s00101p00112120 [Ambore...    86   1e-14
ref|XP_010450093.1| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14
ref|XP_007046316.1| Pentatricopeptide repeat (PPR) superfamily p...    86   1e-14
emb|CDY56890.1| BnaC03g75290D [Brassica napus]                         84   4e-14
ref|XP_010440520.1| PREDICTED: pentatricopeptide repeat-containi...    83   8e-14
gb|KHG06568.1| Pentatricopeptide repeat-containing -like protein...    82   1e-13
ref|XP_009402777.1| PREDICTED: pentatricopeptide repeat-containi...    79   1e-12

>ref|XP_012076004.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14170
           [Jatropha curcas]
          Length = 496

 Score =  102 bits (255), Expect = 8e-20
 Identities = 54/112 (48%), Positives = 68/112 (60%)
 Frame = -2

Query: 345 MHVKLISTIHLPKLLYQKLFFLSYSITPKHQPNLVXXXXXXXXXXXXXXXXXXXHAQLLR 166
           MH+ L+       LL+ KLFF + +     Q +L+                   HA+LLR
Sbjct: 1   MHIALLFLARKESLLFNKLFFSTTTSINPSQTSLISHYFSLLHSSPNPTHLRHLHARLLR 60

Query: 165 NGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRS 10
             LY +V+LSSKL+LMYS H KL+PHS SVF HMP+RN FSWNII+GEFSRS
Sbjct: 61  TSLYDNVILSSKLVLMYSCHGKLIPHSLSVFFHMPYRNIFSWNIIMGEFSRS 112


>ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14170
           [Vitis vinifera]
          Length = 455

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 50/87 (57%), Positives = 57/87 (65%)
 Frame = -2

Query: 264 PKHQPNLVXXXXXXXXXXXXXXXXXXXHAQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHS 85
           PK + NLV                   HA+LLR  LY +V+LSSKL+LMYS+  KL PHS
Sbjct: 4   PKPKSNLVSSYFALLHSSPNPTHLRHLHARLLRTSLYDNVILSSKLLLMYSQLGKLSPHS 63

Query: 84  FSVFLHMPHRNTFSWNIIIGEFSRSGL 4
            SVFLHMPHRN +SWNIIIGEFSRS L
Sbjct: 64  LSVFLHMPHRNIYSWNIIIGEFSRSHL 90


>ref|XP_010269888.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14170
           [Nelumbo nucifera]
          Length = 485

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 50/101 (49%), Positives = 61/101 (60%)
 Frame = -2

Query: 309 KLLYQKLFFLSYSITPKHQPNLVXXXXXXXXXXXXXXXXXXXHAQLLRNGLYSDVVLSSK 130
           + +Y K +  + S   K   +LV                   H +LLR GLY +V+LSSK
Sbjct: 12  RTMYNKFYTTNISTANKDAYDLVSYYFSLLHSSANARHLGSLHTRLLRTGLYGNVILSSK 71

Query: 129 LMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSG 7
           L++MYSKHN L   S SVFLHMPHRN +SWNIIIGEFSRSG
Sbjct: 72  LVMMYSKHNNL-SCSLSVFLHMPHRNIYSWNIIIGEFSRSG 111


>ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537522|gb|EEF39147.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 488

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 41/59 (69%), Positives = 48/59 (81%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSGL 4
           A+LLR  LY +VVLSSKL+LMYS HN+L PHS S F HMP +N +SWNIIIGEF+RS L
Sbjct: 58  ARLLRTSLYDNVVLSSKLVLMYSHHNRLTPHSLSTFFHMPCKNIYSWNIIIGEFARSNL 116


>ref|XP_006283664.1| hypothetical protein CARUB_v10004721mg [Capsella rubella]
           gi|482552369|gb|EOA16562.1| hypothetical protein
           CARUB_v10004721mg [Capsella rubella]
          Length = 477

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 45/60 (75%), Positives = 48/60 (80%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSGLA 1
           A LLR  LYS+VVLSSKL+L YSK N+L P S SVF HMP RN FSWNIIIGEFSRSG A
Sbjct: 55  AHLLRTSLYSNVVLSSKLVLAYSKLNRLFPTSLSVFWHMPCRNIFSWNIIIGEFSRSGFA 114


>ref|XP_012438652.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14170
           [Gossypium raimondii] gi|763783695|gb|KJB50766.1|
           hypothetical protein B456_008G186600 [Gossypium
           raimondii]
          Length = 479

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 46/100 (46%), Positives = 61/100 (61%)
 Frame = -2

Query: 309 KLLYQKLFFLSYSITPKHQPNLVXXXXXXXXXXXXXXXXXXXHAQLLRNGLYSDVVLSSK 130
           K L +KL++ + + +     NL+                   HA+LLR  LY +VVLSS+
Sbjct: 2   KTLLKKLYYSTLACSGPTNSNLISCYFSLINSSPNCKHLRHLHARLLRTSLYDNVVLSSR 61

Query: 129 LMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRS 10
           L+L YS+H  L+P+S SVF HMP RN +SWNIIIGEFSRS
Sbjct: 62  LVLAYSRHKHLVPYSLSVFFHMPQRNIYSWNIIIGEFSRS 101


>ref|NP_193153.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635637|sp|Q5XEY7.2|PP309_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14170 gi|332657989|gb|AEE83389.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 477

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 45/60 (75%), Positives = 48/60 (80%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSGLA 1
           A LLR  LYS+VVLSSKL+L YSK N L P S SVF HMP+RN FSWNIIIGEFSRSG A
Sbjct: 55  AHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFA 114


>gb|AAU94392.1| At4g14170 [Arabidopsis thaliana] gi|55733761|gb|AAV59277.1|
           At4g14170 [Arabidopsis thaliana]
          Length = 458

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 45/60 (75%), Positives = 48/60 (80%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSGLA 1
           A LLR  LYS+VVLSSKL+L YSK N L P S SVF HMP+RN FSWNIIIGEFSRSG A
Sbjct: 36  AHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFA 95


>emb|CAB10196.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268122|emb|CAB78459.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 428

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 45/60 (75%), Positives = 48/60 (80%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSGLA 1
           A LLR  LYS+VVLSSKL+L YSK N L P S SVF HMP+RN FSWNIIIGEFSRSG A
Sbjct: 36  AHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFA 95


>ref|XP_002868306.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314142|gb|EFH44565.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 458

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 45/60 (75%), Positives = 47/60 (78%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSGLA 1
           A LLR  LYS+VVLSSKL+L YSK N L P S SVF HMP RN FSWNIIIGEFSRSG A
Sbjct: 36  AHLLRTSLYSNVVLSSKLVLAYSKMNHLFPTSLSVFWHMPCRNIFSWNIIIGEFSRSGFA 95


>emb|CDY37924.1| BnaA06g18930D [Brassica napus]
          Length = 477

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 43/58 (74%), Positives = 46/58 (79%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSG 7
           A LLR   YS+VVLSSKL+L YSK N L P S +VF HMPHRN FSWNIIIGEFSRSG
Sbjct: 55  AHLLRTSSYSNVVLSSKLVLAYSKLNHLFPTSLAVFWHMPHRNIFSWNIIIGEFSRSG 112


>ref|XP_006414782.1| hypothetical protein EUTSA_v10027059mg [Eutrema salsugineum]
           gi|557115952|gb|ESQ56235.1| hypothetical protein
           EUTSA_v10027059mg [Eutrema salsugineum]
          Length = 472

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 43/60 (71%), Positives = 47/60 (78%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSGLA 1
           A LLR   YS+VVLSSKL+L YSK + L P S +VF HMPHRN FSWNIIIGEFSRSG A
Sbjct: 49  AHLLRTSTYSNVVLSSKLVLAYSKLDHLFPTSLAVFWHMPHRNIFSWNIIIGEFSRSGFA 108


>ref|XP_009150190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14170
           [Brassica rapa]
          Length = 475

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 43/58 (74%), Positives = 46/58 (79%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSG 7
           A LLR   YS+VVLSSKL+L YSK N L P S +VF HMPHRN FSWNIIIGEFSRSG
Sbjct: 55  AHLLRTSNYSNVVLSSKLVLAYSKLNHLFPTSLAVFWHMPHRNIFSWNIIIGEFSRSG 112


>gb|ERM99083.1| hypothetical protein AMTR_s00101p00112120 [Amborella trichopoda]
          Length = 207

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 36/58 (62%), Positives = 50/58 (86%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSG 7
           A+LL+  +Y+DV+L+SKL++MYSKH  L P+++++FLHMP RN +SWNIIIGE SRSG
Sbjct: 58  AKLLKTSVYNDVILNSKLIIMYSKHKSLFPNAYNLFLHMPERNIYSWNIIIGELSRSG 115


>ref|XP_010450093.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14170
           [Camelina sativa]
          Length = 479

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 46/61 (75%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKL-LPHSFSVFLHMPHRNTFSWNIIIGEFSRSGL 4
           A LLR   YSDVVLSSKL+L YSK N+L LP S SVF HMP RN FSWNIIIGEFSRSG 
Sbjct: 56  AHLLRTSTYSDVVLSSKLVLAYSKLNRLFLPTSLSVFWHMPCRNIFSWNIIIGEFSRSGF 115

Query: 3   A 1
           A
Sbjct: 116 A 116


>ref|XP_007046316.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508710251|gb|EOY02148.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 478

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRS 10
           A+LLR  LY DV+LSSKL+L YS+HNKL   S SVF HMP +N +SWNIIIGEFSRS
Sbjct: 44  ARLLRTSLYDDVILSSKLVLAYSQHNKLTSDSLSVFFHMPQKNIYSWNIIIGEFSRS 100


>emb|CDY56890.1| BnaC03g75290D [Brassica napus]
          Length = 474

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 42/58 (72%), Positives = 45/58 (77%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSG 7
           A LLR   YS+VVLSSKL+L YSK   L P S +VF HMPHRN FSWNIIIGEFSRSG
Sbjct: 52  AHLLRTSNYSNVVLSSKLVLAYSKLKHLFPTSLAVFWHMPHRNIFSWNIIIGEFSRSG 109


>ref|XP_010440520.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14170-like [Camelina sativa]
          Length = 479

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 44/61 (72%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKL-LPHSFSVFLHMPHRNTFSWNIIIGEFSRSGL 4
           A LLR   YSDVVL SKL+L YSK N++ LP S SVF HMP RN FSWNIIIGEFSRSG 
Sbjct: 56  AHLLRTSTYSDVVLCSKLVLAYSKLNRIFLPTSLSVFWHMPCRNIFSWNIIIGEFSRSGF 115

Query: 3   A 1
           A
Sbjct: 116 A 116


>gb|KHG06568.1| Pentatricopeptide repeat-containing -like protein [Gossypium
           arboreum]
          Length = 478

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 38/57 (66%), Positives = 47/57 (82%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRS 10
           A+LLR  LY +VVLSS+L+L YS++  L+P+S SVF HMP RN +SWNIIIGEFSRS
Sbjct: 44  ARLLRTSLYDNVVLSSRLVLAYSRYKHLVPYSLSVFFHMPQRNIYSWNIIIGEFSRS 100


>ref|XP_009402777.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14170
           [Musa acuminata subsp. malaccensis]
          Length = 458

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 36/58 (62%), Positives = 47/58 (81%)
 Frame = -2

Query: 180 AQLLRNGLYSDVVLSSKLMLMYSKHNKLLPHSFSVFLHMPHRNTFSWNIIIGEFSRSG 7
           A+LLR GL+++V+LSSKL+L YS+  +LLP + SVFLHMP RN+ SWN +I E SRSG
Sbjct: 33  ARLLRTGLFTNVILSSKLLLSYSRRRRLLPCALSVFLHMPRRNSHSWNTLIAELSRSG 90


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