BLASTX nr result
ID: Cinnamomum25_contig00019744
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00019744
(959 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chl... 539 e-150
ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chl... 537 e-150
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun... 534 e-149
ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chl... 531 e-148
ref|XP_011037691.1| PREDICTED: RNA pseudouridine synthase 6, chl... 525 e-146
ref|XP_010538768.1| PREDICTED: RNA pseudouridine synthase 6, chl... 525 e-146
ref|XP_010538760.1| PREDICTED: RNA pseudouridine synthase 6, chl... 525 e-146
ref|XP_010538752.1| PREDICTED: RNA pseudouridine synthase 6, chl... 525 e-146
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr... 525 e-146
ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citr... 525 e-146
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 521 e-145
ref|XP_002304926.2| pseudouridine synthase family protein [Popul... 521 e-145
ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chl... 520 e-145
ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chl... 520 e-145
gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium r... 520 e-145
ref|XP_008800212.1| PREDICTED: RNA pseudouridine synthase 6, chl... 519 e-144
emb|CDP04372.1| unnamed protein product [Coffea canephora] 519 e-144
ref|XP_004293270.1| PREDICTED: RNA pseudouridine synthase 6, chl... 519 e-144
ref|XP_010057966.1| PREDICTED: RNA pseudouridine synthase 6, chl... 518 e-144
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob... 518 e-144
>ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Nelumbo
nucifera]
Length = 484
Score = 539 bits (1388), Expect = e-150
Identities = 251/319 (78%), Positives = 281/319 (88%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCPEPPP A PEQIRVYKEVTAPSVL+ R SIKGKT+REAQKTFRITH+
Sbjct: 136 LIHFGAVYYALVCPEPPPNAMPEQIRVYKEVTAPSVLKNRLSIKGKTIREAQKTFRITHI 195
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
NEFVEAGTYLRVHVHPKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGT+DNIEESC
Sbjct: 196 NEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTSDNIEESC 255
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
TFA++ALGL+ PL+TTHQIDNCTEGCVVLARTK+YCSIFH KIREK+VKKLY
Sbjct: 256 VTFATRALGLTIPLKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLALAAAP 315
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
VG ITH+MRP+NIAPR++S DFI WHLC+L+VLECKEVPWP++ K YC++DCGW
Sbjct: 316 VPVGTITHHMRPINIAPRLISKDFIKGWHLCKLEVLECKEVPWPNSNIEKEYCIDDCGWP 375
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
K VAYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA +AE NP +NPFG + +Y
Sbjct: 376 QKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAALAEMTNPGLNPFGEYGMKY 435
Query: 57 MSDDDRSRAIEEWIACHGK 1
+DD+R++AIEEWI HGK
Sbjct: 436 TNDDNRTKAIEEWIVHHGK 454
>ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Vitis
vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
product [Vitis vinifera]
Length = 472
Score = 537 bits (1384), Expect = e-150
Identities = 251/319 (78%), Positives = 284/319 (89%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCPEPPP+ATPEQ+R++KEVTAPSVLRKR SIKGKT+REAQKTFRIT V
Sbjct: 124 LIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDV 183
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC
Sbjct: 184 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 243
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALGL+TPLRTTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 244 ATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAP 303
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+GI+THYMRPVNIAPR++S DFI W+LCQL+VLECKEVPWPS + YC+ED GW
Sbjct: 304 MPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWP 363
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
K+ A++CKINLLTGRTHQ+RAQLAACGAP+VGDSMYMPA IAE +P +NPFG++K +Y
Sbjct: 364 LKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKY 423
Query: 57 MSDDDRSRAIEEWIACHGK 1
+++DR A+ EWIA HGK
Sbjct: 424 TTENDRETAVAEWIAQHGK 442
>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
gi|462409392|gb|EMJ14726.1| hypothetical protein
PRUPE_ppa020640mg [Prunus persica]
Length = 477
Score = 534 bits (1376), Expect = e-149
Identities = 245/319 (76%), Positives = 281/319 (88%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPPTATPEQ+RV+KEVTAPSVL+ RASIKGKTVREAQKTFRITH
Sbjct: 127 LIHFGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHA 186
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+EFVEAGTYLRVHVHPKRFPRCY+IDWKSRIIAV+E +VVLDKPAGT+VGGTTDNIEESC
Sbjct: 187 DEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESC 246
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALGL+TPL TTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 247 ATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAP 306
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
GIITHYMRP+N+APR++S DFI RW LCQL+V+ECKE+PWP+ + YC+EDCGW
Sbjct: 307 VPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWP 366
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA +AE +P +NPFG++K Y
Sbjct: 367 SKDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHY 426
Query: 57 MSDDDRSRAIEEWIACHGK 1
+++D+ A+ EWIA HGK
Sbjct: 427 TTENDKETAVAEWIARHGK 445
>ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Prunus mume]
Length = 469
Score = 531 bits (1368), Expect = e-148
Identities = 245/319 (76%), Positives = 280/319 (87%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPPTATPEQ+RV+KEVT PSVL+KRASIKGKTVREAQKTFRIT
Sbjct: 119 LIHFGAVYYALVCPKPPPTATPEQMRVFKEVTEPSVLKKRASIKGKTVREAQKTFRITQA 178
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+EFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAV+E +VVLDKPAGT+VGGTTDNIEESC
Sbjct: 179 DEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESC 238
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALGL+TPL TTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 239 ATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAP 298
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
GIITHYMRP+N+APR++S DFI RW LCQL+V+ECKEVPWP+ + YC+EDCGW
Sbjct: 299 VPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEVPWPNAVVEEKYCVEDCGWP 358
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA +AE +P +NPFG++K Y
Sbjct: 359 SKDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHY 418
Query: 57 MSDDDRSRAIEEWIACHGK 1
+++D+ A+ +WIA HGK
Sbjct: 419 TTENDKETAVAKWIARHGK 437
>ref|XP_011037691.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Populus
euphratica]
Length = 467
Score = 525 bits (1352), Expect = e-146
Identities = 241/319 (75%), Positives = 280/319 (87%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAV+YALVCP+PPPTATPEQIRV++EVTAPSVL+KRASIKGKTVREAQKTFRITHV
Sbjct: 118 LIHFGAVHYALVCPQPPPTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHV 177
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
++F+EAG YLRVHVHPKRFPRCY+IDWKSRII VTES+VVLDKPAGTSVGGTTDNIEESC
Sbjct: 178 DQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESC 237
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALGL+ PLRTTHQIDNCTEGCVVLAR+K+ CS+FH KIREK VKKLY
Sbjct: 238 ATFATRALGLTAPLRTTHQIDNCTEGCVVLARSKEDCSVFHGKIREKTVKKLYIALAASP 297
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+G++ HYMRP+N+APR+VS +FI WHLCQL+V+ECK VPWP + YC++DCGW
Sbjct: 298 VPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVVEEKYCVQDCGWP 357
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTGRTHQ+RAQLAA GAP+VGDSMYMPA +AE V+P NPFG++K QY
Sbjct: 358 SKDHAYECKINLLTGRTHQIRAQLAAVGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQY 417
Query: 57 MSDDDRSRAIEEWIACHGK 1
S+DD++ A+EEW+ CHGK
Sbjct: 418 TSEDDKAIAVEEWVLCHGK 436
>ref|XP_010538768.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X3
[Tarenaya hassleriana]
Length = 386
Score = 525 bits (1352), Expect = e-146
Identities = 241/319 (75%), Positives = 276/319 (86%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPPTATPEQ+R+++EVT+PSVL R SIKGKTVREAQKTFR+TH
Sbjct: 34 LIHFGAVYYALVCPKPPPTATPEQVRLFEEVTSPSVLSNRTSIKGKTVREAQKTFRVTHT 93
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+++VEAGTYLRVHVHPKRFPRCYEIDWKSR+IAVT+SYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 94 DQYVEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDSYVILDKPAGTSVGGTTDNIEESC 153
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATF ++ALGL PL+TTHQIDNCTEGCVV ARTK+YCS+FH+KIR+K+VKKLY
Sbjct: 154 ATFTTRALGLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHKKIRDKEVKKLYLALAAEP 213
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
GIITHYMRP+N+APR+VS D I WHLCQL+VLECK++PWP AT K YC+EDCGW
Sbjct: 214 IPTGIITHYMRPINMAPRLVSEDPIKGWHLCQLEVLECKKLPWPDAATEKKYCIEDCGWR 273
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTG+THQ+RAQLAACGAP+VGDSMYMPA IAE VNP INPFG+ K
Sbjct: 274 SKEYAYECKINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMVNPGINPFGKMKKTC 333
Query: 57 MSDDDRSRAIEEWIACHGK 1
MS+ D A+ EWI+ HGK
Sbjct: 334 MSEHDSEIAVSEWISQHGK 352
>ref|XP_010538760.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X2
[Tarenaya hassleriana]
Length = 393
Score = 525 bits (1352), Expect = e-146
Identities = 241/319 (75%), Positives = 276/319 (86%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPPTATPEQ+R+++EVT+PSVL R SIKGKTVREAQKTFR+TH
Sbjct: 41 LIHFGAVYYALVCPKPPPTATPEQVRLFEEVTSPSVLSNRTSIKGKTVREAQKTFRVTHT 100
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+++VEAGTYLRVHVHPKRFPRCYEIDWKSR+IAVT+SYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 101 DQYVEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDSYVILDKPAGTSVGGTTDNIEESC 160
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATF ++ALGL PL+TTHQIDNCTEGCVV ARTK+YCS+FH+KIR+K+VKKLY
Sbjct: 161 ATFTTRALGLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHKKIRDKEVKKLYLALAAEP 220
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
GIITHYMRP+N+APR+VS D I WHLCQL+VLECK++PWP AT K YC+EDCGW
Sbjct: 221 IPTGIITHYMRPINMAPRLVSEDPIKGWHLCQLEVLECKKLPWPDAATEKKYCIEDCGWR 280
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTG+THQ+RAQLAACGAP+VGDSMYMPA IAE VNP INPFG+ K
Sbjct: 281 SKEYAYECKINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMVNPGINPFGKMKKTC 340
Query: 57 MSDDDRSRAIEEWIACHGK 1
MS+ D A+ EWI+ HGK
Sbjct: 341 MSEHDSEIAVSEWISQHGK 359
>ref|XP_010538752.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Tarenaya hassleriana]
Length = 475
Score = 525 bits (1352), Expect = e-146
Identities = 241/319 (75%), Positives = 276/319 (86%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPPTATPEQ+R+++EVT+PSVL R SIKGKTVREAQKTFR+TH
Sbjct: 123 LIHFGAVYYALVCPKPPPTATPEQVRLFEEVTSPSVLSNRTSIKGKTVREAQKTFRVTHT 182
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+++VEAGTYLRVHVHPKRFPRCYEIDWKSR+IAVT+SYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 183 DQYVEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDSYVILDKPAGTSVGGTTDNIEESC 242
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATF ++ALGL PL+TTHQIDNCTEGCVV ARTK+YCS+FH+KIR+K+VKKLY
Sbjct: 243 ATFTTRALGLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHKKIRDKEVKKLYLALAAEP 302
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
GIITHYMRP+N+APR+VS D I WHLCQL+VLECK++PWP AT K YC+EDCGW
Sbjct: 303 IPTGIITHYMRPINMAPRLVSEDPIKGWHLCQLEVLECKKLPWPDAATEKKYCIEDCGWR 362
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTG+THQ+RAQLAACGAP+VGDSMYMPA IAE VNP INPFG+ K
Sbjct: 363 SKEYAYECKINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMVNPGINPFGKMKKTC 422
Query: 57 MSDDDRSRAIEEWIACHGK 1
MS+ D A+ EWI+ HGK
Sbjct: 423 MSEHDSEIAVSEWISQHGK 441
>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551677|gb|ESR62306.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 525 bits (1352), Expect = e-146
Identities = 247/319 (77%), Positives = 281/319 (88%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PP TATPEQ+RV+KEVT PSVL KR+SIKGKTVREAQKTFRITHV
Sbjct: 130 LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 189
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
++ VEAGTYLRVHVHPKRFPRCY+IDWKSRIIAVTES+VVLDKPAGTSVGGTTDNIEESC
Sbjct: 190 DQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 249
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFAS+ALGL+TPLRTTHQIDNCTEGCVVLART++YCSIFHRKIREK+VKKLY
Sbjct: 250 ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAP 309
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
VGI+THYMRP+NIAPR++S DFI W+LCQL+V+ECK+VPWP K+Y +EDCGW
Sbjct: 310 LPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 369
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
S+ AYECKI LLTGRTHQVRAQLAACGAP+VGDSMYMPA IA+ +P +NPFG+ + +Y
Sbjct: 370 SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 429
Query: 57 MSDDDRSRAIEEWIACHGK 1
SDDD+ A+ EWI+ HGK
Sbjct: 430 ASDDDKEMAVIEWISQHGK 448
>ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551674|gb|ESR62303.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 392
Score = 525 bits (1352), Expect = e-146
Identities = 247/319 (77%), Positives = 281/319 (88%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PP TATPEQ+RV+KEVT PSVL KR+SIKGKTVREAQKTFRITHV
Sbjct: 35 LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 94
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
++ VEAGTYLRVHVHPKRFPRCY+IDWKSRIIAVTES+VVLDKPAGTSVGGTTDNIEESC
Sbjct: 95 DQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 154
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFAS+ALGL+TPLRTTHQIDNCTEGCVVLART++YCSIFHRKIREK+VKKLY
Sbjct: 155 ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAP 214
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
VGI+THYMRP+NIAPR++S DFI W+LCQL+V+ECK+VPWP K+Y +EDCGW
Sbjct: 215 LPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 274
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
S+ AYECKI LLTGRTHQVRAQLAACGAP+VGDSMYMPA IA+ +P +NPFG+ + +Y
Sbjct: 275 SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 334
Query: 57 MSDDDRSRAIEEWIACHGK 1
SDDD+ A+ EWI+ HGK
Sbjct: 335 ASDDDKEMAVIEWISQHGK 353
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 487
Score = 521 bits (1343), Expect = e-145
Identities = 246/318 (77%), Positives = 279/318 (87%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PP TATPEQ+RV+KEVT PSVL KR+SIKGKTVREAQKTFRITHV
Sbjct: 130 LIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHV 189
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
++ VEAGTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNIEESC
Sbjct: 190 DQIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESC 249
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFAS+ALGL+TPLRTTHQIDNCTEGCVVLART++YCSIFHRKIREK+VKKLY
Sbjct: 250 ATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAP 309
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
VGI+THYMRP+NIAPR+VS DFI W+LCQL+V+ECK+VPWP K+Y +EDCGW
Sbjct: 310 LPVGIMTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWP 369
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
S+ AYECKI LLTGRTHQVRAQLAACGAP+VGDSMYMPA IA+ +P +NPFG+ + +Y
Sbjct: 370 SRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEY 429
Query: 57 MSDDDRSRAIEEWIACHG 4
SDDD+ A+ EWI+ HG
Sbjct: 430 ASDDDKEMAVIEWISQHG 447
>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
gi|550340110|gb|EEE85437.2| pseudouridine synthase family
protein [Populus trichocarpa]
Length = 470
Score = 521 bits (1343), Expect = e-145
Identities = 240/319 (75%), Positives = 279/319 (87%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAV+YALVCP+PP TATPEQIRV++EVTAPSVL+KRASIKGKTVREAQKTFRITHV
Sbjct: 118 LIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHV 177
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
++F+EAG YLRVHVHPKRFPRCY+IDWKSRII VTES+VVLDKPAGTSVGGTTDNIEESC
Sbjct: 178 DQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESC 237
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALGL+ PLRTTHQIDNCTEGCVVLART++ CS+FH KIREK VKKLY
Sbjct: 238 ATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASP 297
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+G++ HYMRP+N+APR+VS +FI WHLCQL+V+ECK VPWP + YC++DCGW
Sbjct: 298 VPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWP 357
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTGRTHQ+RAQLAA GAP+VGDSMYMPA +AE V+P NPFG++K QY
Sbjct: 358 SKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQY 417
Query: 57 MSDDDRSRAIEEWIACHGK 1
S+DD++ A+EEW+ CHGK
Sbjct: 418 TSEDDKAIAVEEWVLCHGK 436
>ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Sesamum
indicum]
Length = 484
Score = 520 bits (1339), Expect = e-145
Identities = 241/319 (75%), Positives = 277/319 (86%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAV+YALVCP+PPP+ATPEQI+ +KE T PSVLRKRASIKGKTVREAQKTFRIT
Sbjct: 136 LIHFGAVFYALVCPDPPPSATPEQIKTFKEFTDPSVLRKRASIKGKTVREAQKTFRITRP 195
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+EFVEAGTYLRVHVHPKRFPRCYEIDW+SRI+AVT+ YV+LDKPAGTSVGGTTDNIEESC
Sbjct: 196 DEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIVAVTDDYVILDKPAGTSVGGTTDNIEESC 255
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALGL PLRTTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 256 ATFATRALGLDAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAP 315
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+G+ITHYMRPVNIAPR++SG+FI WHLCQL+VLEC++VPWP+ + +EDCGW
Sbjct: 316 VSLGVITHYMRPVNIAPRLISGEFINGWHLCQLEVLECRKVPWPNRIIEEKNSIEDCGWP 375
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYEC+INLLTGRTHQ+RAQLAACGAP+VGDSMYMPA +AE +P +NPFG+ K +Y
Sbjct: 376 SKDFAYECEINLLTGRTHQIRAQLAACGAPLVGDSMYMPAAVAEANSPGLNPFGKNKKEY 435
Query: 57 MSDDDRSRAIEEWIACHGK 1
SDD + A+EEWIA HGK
Sbjct: 436 SSDDVKVLAVEEWIAHHGK 454
>ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X2
[Gossypium raimondii]
Length = 477
Score = 520 bits (1338), Expect = e-145
Identities = 245/319 (76%), Positives = 276/319 (86%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPP+ATPEQIR++KEVTAPSVL KR SIKGKTVREAQKTFRITHV
Sbjct: 126 LIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFRITHV 185
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+FVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGT+DNIEESC
Sbjct: 186 EQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDNIEESC 245
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFAS+ALG STPL+TTHQIDNCTEGCVVLARTK+YCSIFH KIREK+VKKLY
Sbjct: 246 ATFASRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLALTAAP 305
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+GIITHYMRP+N+APR+VS DFI W+LC+L+V+ECKEVPWP + YC+ED W
Sbjct: 306 VPIGIITHYMRPINVAPRLVSEDFIKGWYLCKLEVMECKEVPWPDPVIQQKYCIEDSEWP 365
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA IAE NP +NPFG++K +Y
Sbjct: 366 SKDRAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAEMANPGLNPFGKYK-KY 424
Query: 57 MSDDDRSRAIEEWIACHGK 1
++ D+ + +W A GK
Sbjct: 425 TTESDKEMTVTKWFARFGK 443
>gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium raimondii]
gi|763790717|gb|KJB57713.1| hypothetical protein
B456_009G176900 [Gossypium raimondii]
Length = 475
Score = 520 bits (1338), Expect = e-145
Identities = 245/319 (76%), Positives = 276/319 (86%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPP+ATPEQIR++KEVTAPSVL KR SIKGKTVREAQKTFRITHV
Sbjct: 124 LIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFRITHV 183
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+FVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGT+DNIEESC
Sbjct: 184 EQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDNIEESC 243
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFAS+ALG STPL+TTHQIDNCTEGCVVLARTK+YCSIFH KIREK+VKKLY
Sbjct: 244 ATFASRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLALTAAP 303
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+GIITHYMRP+N+APR+VS DFI W+LC+L+V+ECKEVPWP + YC+ED W
Sbjct: 304 VPIGIITHYMRPINVAPRLVSEDFIKGWYLCKLEVMECKEVPWPDPVIQQKYCIEDSEWP 363
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA IAE NP +NPFG++K +Y
Sbjct: 364 SKDRAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAEMANPGLNPFGKYK-KY 422
Query: 57 MSDDDRSRAIEEWIACHGK 1
++ D+ + +W A GK
Sbjct: 423 TTESDKEMTVTKWFARFGK 441
>ref|XP_008800212.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Phoenix
dactylifera]
Length = 483
Score = 519 bits (1337), Expect = e-144
Identities = 248/319 (77%), Positives = 275/319 (86%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAV+YALVCP+PPP+ATP+Q+RV+KEVT PSVL+KR+SIKGKTVREAQKTFR+T V
Sbjct: 131 LIHFGAVHYALVCPKPPPSATPDQVRVFKEVTEPSVLQKRSSIKGKTVREAQKTFRVTDV 190
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
N+ VEAGTYLRVHVHPKRFPRCYEIDWKSRII VT+SYVVLDKPA TSVGGTTDN EE C
Sbjct: 191 NQIVEAGTYLRVHVHPKRFPRCYEIDWKSRIITVTDSYVVLDKPAATSVGGTTDNTEECC 250
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFAS+ALGL TPL+TTHQIDNCTEGCVVLARTKD+CSIFH IREKQVKK Y
Sbjct: 251 ATFASRALGLETPLKTTHQIDNCTEGCVVLARTKDFCSIFHGMIREKQVKKFYLALAAAP 310
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
VGII+HYMRPVN+APR+VS + IG WHLCQL+VLECKEVPWP+ KSY +EDCGW
Sbjct: 311 VPVGIISHYMRPVNVAPRLVSEESIGGWHLCQLEVLECKEVPWPNVDVEKSYGIEDCGWP 370
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK +AYECKINLLTG+THQVRAQLAA GAP+VGDSMYMPA AE N INPFGR + Q+
Sbjct: 371 SKDIAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYMPAAAAEMCNTQINPFGRNRKQF 430
Query: 57 MSDDDRSRAIEEWIACHGK 1
S+DDR AIEEWIA HGK
Sbjct: 431 TSEDDRILAIEEWIAQHGK 449
>emb|CDP04372.1| unnamed protein product [Coffea canephora]
Length = 486
Score = 519 bits (1337), Expect = e-144
Identities = 239/319 (74%), Positives = 280/319 (87%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPP+ATPEQI+ YKEVTAPSVL+ RASIKGKTVREAQKT+RIT
Sbjct: 138 LIHFGAVYYALVCPKPPPSATPEQIKTYKEVTAPSVLKNRASIKGKTVREAQKTYRITRA 197
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+EFVEAGTYLRVHVHPKRFPRCYEIDW+SRI+A+TESYV+LDKPAGTSVGGTTDNIEESC
Sbjct: 198 DEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIVAITESYVILDKPAGTSVGGTTDNIEESC 257
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALGL++PL TTHQIDNCTEGCVVLARTKDYCS+FH KIREK+VKKLY
Sbjct: 258 ATFATRALGLTSPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAP 317
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
VG+ITHYMRP+NIAPR+VS + + WHLCQL+VLECK+V WP++ T + Y +EDCGW
Sbjct: 318 VPVGVITHYMRPINIAPRLVSEESVDGWHLCQLEVLECKKVAWPTSMTERRYSIEDCGWP 377
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
+ AYECK+NLLTGRTHQ+RAQLAACGAP+VGDSMY+PA +AE VNP +NPF + +Y
Sbjct: 378 PQDFAYECKVNLLTGRTHQIRAQLAACGAPIVGDSMYLPAAVAEIVNPRLNPFRKNSKKY 437
Query: 57 MSDDDRSRAIEEWIACHGK 1
++ D+++AIEEWIA HGK
Sbjct: 438 ANETDKAQAIEEWIAQHGK 456
>ref|XP_004293270.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Fragaria
vesca subsp. vesca] gi|764549508|ref|XP_011459966.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
[Fragaria vesca subsp. vesca]
gi|764549517|ref|XP_011459967.1| PREDICTED: RNA
pseudouridine synthase 6, chloroplastic [Fragaria vesca
subsp. vesca]
Length = 477
Score = 519 bits (1337), Expect = e-144
Identities = 241/319 (75%), Positives = 274/319 (85%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPPTATPEQ+RVYKEVTAPSVL+KR SIKGKTVREAQKTFRITH
Sbjct: 127 LIHFGAVYYALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHA 186
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+++VE GTYLRVHVHPKRFPRCY+IDWKSR+IAVTE +VVLDKPAGT+VGGTTDNIEESC
Sbjct: 187 DQYVEDGTYLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESC 246
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATF S+ALGLSTPL TTHQIDNCTEGCVVLARTKDYCS+FH KIREK+VKKLY
Sbjct: 247 ATFTSRALGLSTPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAP 306
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+G ITHYMRP+N+APR++S D I RW LCQL+V+ECK+VPWPS+ + Y +EDCGW
Sbjct: 307 VPLGTITHYMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWP 366
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
SK AYECKINLLTG+THQ+RAQLAACG P+VGDSMYMPA IAE NP +NPFG+ K Y
Sbjct: 367 SKDYAYECKINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHY 426
Query: 57 MSDDDRSRAIEEWIACHGK 1
++D A+ EW+A HGK
Sbjct: 427 AGENDEEIAVTEWMARHGK 445
>ref|XP_010057966.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Eucalyptus
grandis] gi|702352094|ref|XP_010057967.1| PREDICTED: RNA
pseudouridine synthase 6, chloroplastic [Eucalyptus
grandis] gi|629110209|gb|KCW75355.1| hypothetical protein
EUGRSUZ_E04102 [Eucalyptus grandis]
gi|629110210|gb|KCW75356.1| hypothetical protein
EUGRSUZ_E04102 [Eucalyptus grandis]
Length = 472
Score = 518 bits (1334), Expect = e-144
Identities = 245/319 (76%), Positives = 274/319 (85%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAV+YALV P+PPPTATPEQIRV+KEVT PSVLRKRASIKGKTVREAQKTFRIT
Sbjct: 124 LIHFGAVHYALVTPQPPPTATPEQIRVFKEVTKPSVLRKRASIKGKTVREAQKTFRITDP 183
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
+FVEAG YLRVHVHPKRFPRCYEIDWKSRIIAV ESYVVLDKPAGTSVGGT DNIEE+C
Sbjct: 184 GQFVEAGMYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTADNIEETC 243
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALGL PL+TTHQIDNC+EGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 244 ATFATRALGLVEPLKTTHQIDNCSEGCVVLARTKEYCSVFHGKIREKKVKKLYHALAVAP 303
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+GIITHYMRPVN+APR+V+ +FI W+LCQL+V+ECKEV WP + YC+EDCGW+
Sbjct: 304 VPLGIITHYMRPVNMAPRLVTEEFIKGWYLCQLEVMECKEVAWPDSVVEAEYCVEDCGWT 363
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
K VAYECKINLLTGRTHQ+RAQLAACGAP+VGDS YMPA IAE VNP INP G FK Y
Sbjct: 364 KKDVAYECKINLLTGRTHQIRAQLAACGAPIVGDSAYMPAAIAEMVNPGINPLGNFKKLY 423
Query: 57 MSDDDRSRAIEEWIACHGK 1
S+DD++ AI EW+A HGK
Sbjct: 424 ASEDDKAVAIAEWVAQHGK 442
>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
gi|508781387|gb|EOY28643.1| Pseudouridine synthase family
protein [Theobroma cacao]
Length = 491
Score = 518 bits (1333), Expect = e-144
Identities = 243/319 (76%), Positives = 280/319 (87%)
Frame = -3
Query: 957 LIQFGAVYYALVCPEPPPTATPEQIRVYKEVTAPSVLRKRASIKGKTVREAQKTFRITHV 778
LI FGAVYYALVCP+PPP+ATPEQIR++KEVTAPSVL KR SI+GKTVREAQKTFRITHV
Sbjct: 140 LIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHV 199
Query: 777 NEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 598
++FVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGTTDNIEESC
Sbjct: 200 DQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESC 259
Query: 597 ATFASQALGLSTPLRTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXXXXXX 418
ATFA++ALG STPL+TTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 260 ATFANRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAP 319
Query: 417 XXVGIITHYMRPVNIAPRIVSGDFIGRWHLCQLKVLECKEVPWPSNATAKSYCLEDCGWS 238
+G+ITHYMRP+N+APR+VS DFI W+LCQL+V+ECK+VPWP ++YC+ED GW
Sbjct: 320 LPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIEDSGWP 379
Query: 237 SKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVNPSINPFGRFKNQY 58
K AYECKINLLTGRTHQVRAQLAACGAP++GDSMYMP IAE NP +NPFG++K ++
Sbjct: 380 LKDHAYECKINLLTGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGKYK-KH 438
Query: 57 MSDDDRSRAIEEWIACHGK 1
S++D+ AI EWI+ GK
Sbjct: 439 TSENDKEIAITEWISQFGK 457