BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00019425
         (634 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009337222.1| PREDICTED: pentatricopeptide repeat-containi...   231   3e-58
ref|XP_008388776.1| PREDICTED: pentatricopeptide repeat-containi...   230   4e-58
ref|XP_008242241.1| PREDICTED: pentatricopeptide repeat-containi...   228   2e-57
ref|XP_009359734.1| PREDICTED: pentatricopeptide repeat-containi...   225   1e-56
ref|XP_008337852.1| PREDICTED: pentatricopeptide repeat-containi...   225   1e-56
ref|XP_010276672.1| PREDICTED: pentatricopeptide repeat-containi...   224   3e-56
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein...   220   4e-55
gb|KJB83000.1| hypothetical protein B456_013G224200, partial [Go...   219   1e-54
ref|XP_012462981.1| PREDICTED: pentatricopeptide repeat-containi...   219   1e-54
ref|XP_008459827.1| PREDICTED: pentatricopeptide repeat-containi...   217   3e-54
ref|XP_008459803.1| PREDICTED: pentatricopeptide repeat-containi...   217   3e-54
ref|XP_010917211.1| PREDICTED: pentatricopeptide repeat-containi...   217   5e-54
ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containi...   216   1e-53
ref|XP_011648579.1| PREDICTED: pentatricopeptide repeat-containi...   213   9e-53
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   213   9e-53
ref|XP_008786659.1| PREDICTED: pentatricopeptide repeat-containi...   211   3e-52
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr...   208   2e-51
ref|XP_012444593.1| PREDICTED: pentatricopeptide repeat-containi...   205   1e-50
ref|XP_012444589.1| PREDICTED: pentatricopeptide repeat-containi...   205   1e-50
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi...   204   3e-50

>ref|XP_009337222.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Pyrus x bretschneideri]
          Length = 597

 Score =  231 bits (588), Expect = 3e-58
 Identities = 115/213 (53%), Positives = 148/213 (69%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GLQDSAK VFD MRS GH PD S+V  LVSSYA+ G  D A   L + H CG  R     
Sbjct: 172 GLQDSAKLVFDYMRSDGHTPDDSVVELLVSSYAQIGKLDDAEKFLDEAH-CGEIRLPPFV 230

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ N+V++A+  FR    S   PD +TFNI+I+GLCR GEID+AF  F +MG
Sbjct: 231 YNNLFNVLVKQNKVDEAVSLFRKHMGSHCHPDNWTFNILIRGLCRVGEIDKAFELFSDMG 290

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  DIVTYNT I GLCRA ++D+  ++L E++SR    PDV T+T V SGYCK+GKM
Sbjct: 291 SSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDVITFTSVISGYCKLGKM 350

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E+AS +FDEM++AG+RP+ VT+N +IDG+GK G
Sbjct: 351 EEASVLFDEMISAGVRPTSVTFNAMIDGFGKTG 383



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQ--YHECGGYRXXX 458
           G  + A  +FD M S G  P       ++  + K GN  SA+++  +  +H   GY    
Sbjct: 348 GKMEEASVLFDEMISAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFH---GYHSDV 404

Query: 457 XXXXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                      R  +++  +  ++    +   P  +TF+++I  LCR   +  A  F  +
Sbjct: 405 FTFTSLIDGHCRAGQLSQGLKLWQEMNGKNVSPSAYTFSVLINALCRESRLHEARDFLRQ 464

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           +     +     YN  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G C  G
Sbjct: 465 LKWSNVVPKPFIYNPVIDGFCKAGNVDEANAIVAEMEEKR-CSPDKVTFTILILGNCMKG 523

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           +M +A S F +M+A G  P  +T N L     KAG
Sbjct: 524 RMSEAISNFKKMLAIGCAPDNITVNSLTSCLIKAG 558



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 5/188 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G   SA  +   M  +G+  D      L+  + +AG     + L   + E  G       
Sbjct: 383 GNMGSALAMHQKMLFHGYHSDVFTFTSLIDGHCRAGQLSQGLKL---WQEMNGKNVSPSA 439

Query: 451 XXXXXXL--MVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                 +  + R++R+++A  F R    S   P  F +N +I G C+ G +D A     E
Sbjct: 440 YTFSVLINALCRESRLHEARDFLRQLKWSNVVPKPFIYNPVIDGFCKAGNVDEANAIVAE 499

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           M    C  D VT+   I G C  G++ +A     ++ + G C PD  T   + S   K G
Sbjct: 500 MEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIG-CAPDNITVNSLTSCLIKAG 558

Query: 106 KMEDASSV 83
              +A  +
Sbjct: 559 MANEAHHI 566


>ref|XP_008388776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Malus domestica]
          Length = 593

 Score =  230 bits (587), Expect = 4e-58
 Identities = 115/213 (53%), Positives = 146/213 (68%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GLQDSAK VFD MRS GH PD S+V  LVSSYA+ G  D A   L + H CG  R     
Sbjct: 168 GLQDSAKLVFDYMRSDGHTPDDSVVELLVSSYAQMGKLDDAEKFLNEAH-CGEIRLPPFV 226

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V  N+V++A+C FR    S   PD +TFNI+I+GLCR GEID+AF  F +MG
Sbjct: 227 YNNLFNVLVXQNKVDEAVCLFRKHMGSHXXPDNWTFNILIRGLCRVGEIDKAFELFSDMG 286

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  DIVTYNT I GLCRA ++D+  ++L E++SR    PDV T+T V SGYCK+GKM
Sbjct: 287 SSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDVITFTSVISGYCKLGKM 346

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E+A  +FDEM+ AG+RP+ VT+N +IDG+GK G
Sbjct: 347 EEAXVLFDEMINAGVRPTSVTFNAMIDGFGKTG 379



 Score = 90.1 bits (222), Expect = 8e-16
 Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQ--YHECGGYRXXX 458
           G  + A  +FD M + G  P       ++  + K GN  SA+++  +  +H   GY    
Sbjct: 344 GKMEEAXVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFH---GYHSDV 400

Query: 457 XXXXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                      R  +++  +  ++    +   P  +TF+++I  LC+   +  A  F  +
Sbjct: 401 FTFTSLIDGHCRAGKLSQGLKLWQEMNGKNVSPSAYTFSVLINALCKESRLHEARDFLRQ 460

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           +     +     YN  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G C  G
Sbjct: 461 LKWSNVVPKPFIYNPVIDGFCKAGNVDEANAIVAEMEEKR-CSPDKVTFTILILGNCMKG 519

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           +M +A S F +M+A G  P  +T N L     KAG
Sbjct: 520 RMSEAISNFKKMLAIGCAPDSITVNSLTSCLMKAG 554



 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
 Frame = -1

Query: 622 DSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXX 443
           D A E+F  M S G  PD      L+S   +A   D    LL +                
Sbjct: 276 DKAFELFSDMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDVITFTS 335

Query: 442 XXXLMVRDNRVNDAICFFR---SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                 +  ++ +A   F    ++G RP + TFN +I G  + G +  A    ++M   G
Sbjct: 336 VISGYCKLGKMEEAXVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHG 395

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
              D+ T+ + IDG CRAGK+ +  ++  E+  + V  P   T++ + +  CK  ++ +A
Sbjct: 396 YHSDVFTFTSLIDGHCRAGKLSQGLKLWQEMNGKNVS-PSAYTFSVLINALCKESRLHEA 454

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
                ++  + + P    YN +IDG+ KAG
Sbjct: 455 RDFLRQLKWSNVVPKPFIYNPVIDGFCKAG 484


>ref|XP_008242241.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Prunus mume]
          Length = 595

 Score =  228 bits (582), Expect = 2e-57
 Identities = 116/213 (54%), Positives = 149/213 (69%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GLQDSAK VFD MRS GH PD SIV  LVSSYA+ G  ++A  LL + H CG  R     
Sbjct: 170 GLQDSAKLVFDYMRSDGHTPDDSIVELLVSSYAQMGKLNNAEKLLDEVH-CGEVRLSPFV 228

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ N+V +A+C FR    S  RPD++TFNI+I+GLC+ GEID+AF FF +M 
Sbjct: 229 YNNLFNVLVKQNKVEEAVCLFRKHMGSHCRPDSWTFNILIRGLCKIGEIDKAFEFFSDME 288

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  DIVTYNT I GLCRA ++D+   +L E++SR    PDV T+T V SGYCK+GKM
Sbjct: 289 SFGCYSDIVTYNTLISGLCRANEVDRGCHLLKEVQSRIELSPDVITFTSVISGYCKLGKM 348

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E+AS +FDEM  +G+ P+ VT+N LIDG+GK+G
Sbjct: 349 EEASVLFDEMNNSGVGPTSVTFNALIDGFGKSG 381



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQ--YHECGGYRXXX 458
           G  + A  +FD M + G  P       L+  + K+GN  SA+++  +  +H   GYR   
Sbjct: 346 GKMEEASVLFDEMNNSGVGPTSVTFNALIDGFGKSGNMISALAMYEKMLFH---GYRPDV 402

Query: 457 XXXXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                      R  +++  +  ++    +   P  +TF+++I  LC+   +  A  F  +
Sbjct: 403 ITFTSLIDGYCRAGKLSQGLKLWQEMNAKYVSPSAYTFSVLINALCKENRLQEAHEFLRQ 462

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           +     I     YN  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G C  G
Sbjct: 463 LKWSNVIPRPFIYNPVIDGFCKAGNVDEANLIVAEMEEKR-CSPDKVTFTILILGNCMKG 521

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           +M +A S F+ M+A G  P  +T N LI    KAG
Sbjct: 522 RMSEAISNFERMLAIGCAPDNITVNSLISCLMKAG 556


>ref|XP_009359734.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Pyrus x bretschneideri]
          Length = 547

 Score =  225 bits (574), Expect = 1e-56
 Identities = 113/213 (53%), Positives = 146/213 (68%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GLQDSAK VFD MRS GH PD S V  LVSSYA+ G  D+A   L + H C   R     
Sbjct: 122 GLQDSAKLVFDYMRSDGHTPDDSAVELLVSSYAQMGKLDNAEKFLDEVH-CDEIRLTPFV 180

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ N+ ++A+  FR    S  RPD++TFNI+I+GLCR GE+D+AF  F +MG
Sbjct: 181 YNNLFNVLVQQNKADEAVYLFRKHMWSHCRPDSWTFNILIRGLCRVGEVDKAFELFSDMG 240

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  DIVTYNT I GLCR  K+D+  ++L E++SR    PDV T+T V SGYCK+GKM
Sbjct: 241 SFGCYPDIVTYNTLITGLCRTNKVDRGCQLLKEVQSRIELSPDVITFTSVISGYCKLGKM 300

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E+AS +FDEM+ AG+RP+ VT+N +IDG+GK G
Sbjct: 301 EEASVLFDEMINAGVRPTSVTFNAMIDGFGKTG 333



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 5/215 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQ--YHECGGYRXXX 458
           G  + A  +FD M + G  P       ++  + K GN  SA+++  +  +H   GYR   
Sbjct: 298 GKMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFH---GYRSDV 354

Query: 457 XXXXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                      R  +++  +  ++    +   P  +TF+++I  LC+   +  A  F  +
Sbjct: 355 FTFTSLIDGHCRAGQLSQGLKLWQEMNGKNVSPSAYTFSVLINALCKESRLHEARDFLRQ 414

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           +     +     YN  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G C  G
Sbjct: 415 LKWSNVVPKPFIYNPVIDGFCKAGNVDEANAIVAEMEEKR-CSPDKVTFTILILGNCMKG 473

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           +M +A S F +M+A G  P  +T N L     KAG
Sbjct: 474 RMSEAISNFKKMLAIGCAPDNITVNALTSCLMKAG 508


>ref|XP_008337852.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Malus domestica]
          Length = 597

 Score =  225 bits (574), Expect = 1e-56
 Identities = 113/213 (53%), Positives = 146/213 (68%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GLQDSAK VFD MRS GH PD S V  LVSSYA+ G  D+A   L + H C   R     
Sbjct: 172 GLQDSAKLVFDYMRSDGHTPDDSAVELLVSSYAQMGKLDNAEKFLGEVH-CDEIRLTPFV 230

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ N+V++A+C FR    S   PD++TFNI+I+GLCR GEI +AF  F +MG
Sbjct: 231 YNNLFNVLVKQNKVDEAVCLFRKHMGSHCCPDSWTFNILIRGLCRVGEIGKAFELFSDMG 290

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  DIVTYNT I GLCR  ++D+  ++L E++SR    PDV T+T V SGYCK+GKM
Sbjct: 291 SFGCYPDIVTYNTLITGLCRTNEVDRGCQLLKEVQSRIELSPDVITFTSVISGYCKLGKM 350

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E+AS +FDEM+ AG+RP+ VT+N +IDG+GK G
Sbjct: 351 EEASVLFDEMINAGVRPTSVTFNAMIDGFGKTG 383



 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 5/215 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQ--YHECGGYRXXX 458
           G  + A  +FD M + G  P       ++  + K GN  SA+++  +  +H   GYR   
Sbjct: 348 GKMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFH---GYRSDV 404

Query: 457 XXXXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                      R  +++  +  ++    +   P  +TF+++I  LC+   +  A  F  +
Sbjct: 405 FTFTSLIDGHCRAGQLSQGLKLWQEMNGKDVSPSAYTFSVLINALCKESRLHEARDFLRQ 464

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           +     ++    YN  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G C  G
Sbjct: 465 LKWSNVVLKPFIYNPVIDGFCKAGNVDEANAIVAEMEEKR-CSPDKVTFTILILGNCMKG 523

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           +M +A S F +M+A G  P  +T N L     KAG
Sbjct: 524 RMSEAISNFKKMLAIGCAPDNITVNALTSCLMKAG 558


>ref|XP_010276672.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Nelumbo nucifera]
          Length = 586

 Score =  224 bits (571), Expect = 3e-56
 Identities = 112/213 (52%), Positives = 145/213 (68%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL D+AK VFD MR+ GHLPD SI+  L+SS A+AG  D   SL++Q     G       
Sbjct: 160 GLHDAAKVVFDCMRNDGHLPDSSILAFLLSSCARAGKLDITKSLISQVLG-NGIEVNPFV 218

Query: 451 XXXXXXLMVRDNRVNDAICFFR---SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ NRV +A+C  R   SS FRPDT TFNI+IKGLCR GE+DRAF  F++MG
Sbjct: 219 YNNLLEILVKSNRVQEAVCLLREHLSSCFRPDTCTFNIVIKGLCRIGEVDRAFEIFDDMG 278

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  D+VTYNT I+GLCRA  +D+ H +L EI+S      DV TYT +  GYCK+GKM
Sbjct: 279 SFGCCPDVVTYNTLINGLCRASDVDRGHRLLMEIQSNSKFSLDVVTYTSLIKGYCKLGKM 338

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E+AS+++DEMV +G  P+++TYN LIDG+ K G
Sbjct: 339 EEASNLYDEMVRSGTEPNVITYNTLIDGFSKIG 371



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D A E+FD M S+G  PD      L++   +A + D    LL +      +      
Sbjct: 265 GEVDRAFEIFDDMGSFGCCPDVVTYNTLINGLCRASDVDRGHRLLMEIQSNSKFSLDVVT 324

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    +  ++ +A   +     SG  P+  T+N +I G  + GE+  A   +E++ 
Sbjct: 325 YTSLIKGYCKLGKMEEASNLYDEMVRSGTEPNVITYNTLIDGFSKIGEVGSAMVMYEKLL 384

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
             GC  D+VT+ + ID  CR+G+ID+  ++ +E+++R +  P+  T+  + +  CK  ++
Sbjct: 385 LQGCFPDVVTFTSLIDAHCRSGQIDEGIKLWHEMQTRNIS-PNAHTFHVLINSLCKENRL 443

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A  +  ++    I P    YN +IDG+ KAG
Sbjct: 444 NEARGLLRQLKWTDIVPQAFVYNPVIDGFCKAG 476



 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  + A  ++D M   G  P+      L+  ++K G   SAM +  +    G +      
Sbjct: 336 GKMEEASNLYDEMVRSGTEPNVITYNTLIDGFSKIGEVGSAMVMYEKLLLQGCFPDVVTF 395

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R  ++++ I  +     R   P+  TF+++I  LC+   ++ A     ++ 
Sbjct: 396 TSLIDAHC-RSGQIDEGIKLWHEMQTRNISPNAHTFHVLINSLCKENRLNEARGLLRQLK 454

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
               +     YN  IDG C+AG ID+A+ ++ E+  +  C  D  T+T +  G+C  GKM
Sbjct: 455 WTDIVPQAFVYNPVIDGFCKAGNIDEANAIVAEMEEKR-CKLDTYTFTILIIGHCMKGKM 513

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A ++F +M+ +   P  +T   L     KAG
Sbjct: 514 HEAINIFHKMLNSNCPPDTITVQALTSCLFKAG 546


>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 592

 Score =  220 bits (561), Expect = 4e-55
 Identities = 105/213 (49%), Positives = 149/213 (69%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL DSAK VFD MR  GHLPD +I+G ++SS+ +AG F  A  LLA   +          
Sbjct: 167 GLHDSAKLVFDYMRIDGHLPDTTILGFMISSFGRAGEFGMAKKLLADV-QSDEVVISIFA 225

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 +MV+ N++ +A+  ++    S F PD +TFNI+I+GLCR G++D+AF  F +MG
Sbjct: 226 LNNLLNMMVKQNKLEEAVSLYKENLGSNFYPDAWTFNILIRGLCRVGKVDQAFELFNDMG 285

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  DIVTYNT I+GLC+  ++D+ H++LN+++SR  C PDV TYT V SGYCK+GKM
Sbjct: 286 SFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQVQSRDDCSPDVVTYTSVISGYCKLGKM 345

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           ++AS++F EM+++G  P++VT+NVLIDG+GK G
Sbjct: 346 DEASALFHEMISSGTVPTVVTFNVLIDGFGKVG 378



 Score =  103 bits (257), Expect = 7e-20
 Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D A E+F+ M S+G  PD      +++   K    D    LL Q             
Sbjct: 272 GKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQVQSRDDCSPDVVT 331

Query: 451 XXXXXXLMVRDNRVNDAICFFR---SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    +  ++++A   F    SSG  P   TFN++I G  + G++  A   +E+M 
Sbjct: 332 YTSVISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLIDGFGKVGDMVSAKSMYEQMA 391

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GCI D+VT+ + IDG CR G ++++ ++ N ++ R +  P+V T+    +  CK  ++
Sbjct: 392 SFGCIADVVTFTSLIDGYCRIGDVNQSLQLWNTMKGRDLS-PNVYTFAITINALCKENRL 450

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A     E+    I P    +N +IDG+ KAG
Sbjct: 451 HEARGFLRELQCRNIVPKPFIFNPVIDGFCKAG 483



 Score = 90.1 bits (222), Expect = 8e-16
 Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D A  +F  M S G +P       L+  + K G+  SA S+  Q    G        
Sbjct: 343 GKMDEASALFHEMISSGTVPTVVTFNVLIDGFGKVGDMVSAKSMYEQMASFGCIADVVTF 402

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R   VN ++  + +   R   P+ +TF I I  LC+   +  A  F  E+ 
Sbjct: 403 TSLIDGYC-RIGDVNQSLQLWNTMKGRDLSPNVYTFAITINALCKENRLHEARGFLRELQ 461

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
               +     +N  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G+C  G+M
Sbjct: 462 CRNIVPKPFIFNPVIDGFCKAGNLDEANLIVAEMEEKQ-CHPDKVTFTILIIGHCMKGRM 520

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A S+F++M++ G  P  VT N LI    KAG
Sbjct: 521 FEAISIFNKMLSVGCTPDDVTVNSLISCLLKAG 553



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
 Frame = -1

Query: 619 SAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGG--YRXXXXXXX 446
           SAK +++ M S+G + D      L+  Y + G+ + ++ L   ++   G           
Sbjct: 382 SAKSMYEQMASFGCIADVVTFTSLIDGYCRIGDVNQSLQL---WNTMKGRDLSPNVYTFA 438

Query: 445 XXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSL 275
                + ++NR+++A  F R    R   P  F FN +I G C+ G +D A     EM   
Sbjct: 439 ITINALCKENRLHEARGFLRELQCRNIVPKPFIFNPVIDGFCKAGNLDEANLIVAEMEEK 498

Query: 274 GCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMED 95
            C  D VT+   I G C  G++ +A  + N++ S G C PD  T   + S   K G   +
Sbjct: 499 QCHPDKVTFTILIIGHCMKGRMFEAISIFNKMLSVG-CTPDDVTVNSLISCLLKAGMPSE 557

Query: 94  ASSV 83
           AS +
Sbjct: 558 ASRI 561


>gb|KJB83000.1| hypothetical protein B456_013G224200, partial [Gossypium raimondii]
          Length = 533

 Score =  219 bits (557), Expect = 1e-54
 Identities = 106/213 (49%), Positives = 147/213 (69%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL  SA+ VFD M+  GHLPD +++G ++SS+ +AG F  A  LLA+  +          
Sbjct: 134 GLYGSARLVFDYMKIDGHLPDSTLLGFMISSFGRAGEFGMARKLLAEV-QSDDVMVTIFA 192

Query: 451 XXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 +MV+ N + +A+  ++ +    F PDT+TFNI+I+GLCR G++D+AF FF +M 
Sbjct: 193 VNNLLNMMVKQNNLEEAVSLYKENLGLNFNPDTWTFNILIRGLCRVGKVDQAFEFFNDMR 252

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  DIVTYNT I+GLCR  ++D+ H +LNEIR R  C P+V TYT V SGYCK+GKM
Sbjct: 253 SFGCFPDIVTYNTIINGLCREYEVDRGHSLLNEIRLRDDCAPNVVTYTSVISGYCKLGKM 312

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E AS++FDEM+++G  PS+VT+NVLIDG+GK G
Sbjct: 313 EKASALFDEMMSSGTLPSVVTFNVLIDGFGKVG 345



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYH---ECGGYRXX 461
           G  D A E F+ MRS+G  PD      +++   +    D   SLL +     +C      
Sbjct: 239 GKVDQAFEFFNDMRSFGCFPDIVTYNTIINGLCREYEVDRGHSLLNEIRLRDDCAPNVVT 298

Query: 460 XXXXXXXXXLMVRDNRVNDAICFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                     + +  + +       SSG  P   TFN++I G  + G++  A   +E+M 
Sbjct: 299 YTSVISGYCKLGKMEKASALFDEMMSSGTLPSVVTFNVLIDGFGKVGDMLSAKSLYEKMA 358

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GCI D+VT+ + I+G C+ G ++++ ++ + ++ + V  P+V T+    +  CK  ++
Sbjct: 359 SFGCIPDVVTFTSLINGYCQIGDVNRSFQLWDAMKVKNVS-PNVYTFAITINALCKENRL 417

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A     E+    I P    +N +IDG+ KAG
Sbjct: 418 CEACRFLRELQCRNIVPKPFIFNPVIDGFCKAG 450



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  + A  +FD M S G LP       L+  + K G+  SA SL  +    G        
Sbjct: 310 GKMEKASALFDEMMSSGTLPSVVTFNVLIDGFGKVGDMLSAKSLYEKMASFGCIPDVVTF 369

Query: 451 XXXXXXL-MVRD-NRVNDAICFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGS 278
                    + D NR        +     P+ +TF I I  LC+   +  A RF  E+  
Sbjct: 370 TSLINGYCQIGDVNRSFQLWDAMKVKNVSPNVYTFAITINALCKENRLCEACRFLRELQC 429

Query: 277 LGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKME 98
              +     +N  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G+C  G+M 
Sbjct: 430 RNIVPKPFIFNPVIDGFCKAGNLDEANRIVAEMEKKK-CDPDKVTFTILIIGHCMKGRML 488

Query: 97  DASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            A S+FD+M++ G  P  VT   LI    KAG
Sbjct: 489 KAISIFDKMLSVGCPPDYVTVRSLISCLLKAG 520



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
 Frame = -1

Query: 619 SAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXXX 440
           SAK +++ M S+G +PD      L++ Y + G+ + +  L     +              
Sbjct: 349 SAKSLYEKMASFGCIPDVVTFTSLINGYCQIGDVNRSFQLWDAM-KVKNVSPNVYTFAIT 407

Query: 439 XXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLGC 269
              + ++NR+ +A  F R    R   P  F FN +I G C+ G +D A R   EM    C
Sbjct: 408 INALCKENRLCEACRFLRELQCRNIVPKPFIFNPVIDGFCKAGNLDEANRIVAEMEKKKC 467

Query: 268 IVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
             D VT+   I G C  G++ KA  + +++ S G C PD  T   + S   K G  ++A
Sbjct: 468 DPDKVTFTILIIGHCMKGRMLKAISIFDKMLSVG-CPPDYVTVRSLISCLLKAGMPKEA 525


>ref|XP_012462981.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Gossypium raimondii] gi|823260519|ref|XP_012462982.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Gossypium raimondii]
           gi|823260521|ref|XP_012462983.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Gossypium raimondii] gi|823260523|ref|XP_012462984.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Gossypium raimondii]
           gi|763816146|gb|KJB82998.1| hypothetical protein
           B456_013G224200 [Gossypium raimondii]
           gi|763816147|gb|KJB82999.1| hypothetical protein
           B456_013G224200 [Gossypium raimondii]
          Length = 524

 Score =  219 bits (557), Expect = 1e-54
 Identities = 106/213 (49%), Positives = 147/213 (69%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL  SA+ VFD M+  GHLPD +++G ++SS+ +AG F  A  LLA+  +          
Sbjct: 125 GLYGSARLVFDYMKIDGHLPDSTLLGFMISSFGRAGEFGMARKLLAEV-QSDDVMVTIFA 183

Query: 451 XXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 +MV+ N + +A+  ++ +    F PDT+TFNI+I+GLCR G++D+AF FF +M 
Sbjct: 184 VNNLLNMMVKQNNLEEAVSLYKENLGLNFNPDTWTFNILIRGLCRVGKVDQAFEFFNDMR 243

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  DIVTYNT I+GLCR  ++D+ H +LNEIR R  C P+V TYT V SGYCK+GKM
Sbjct: 244 SFGCFPDIVTYNTIINGLCREYEVDRGHSLLNEIRLRDDCAPNVVTYTSVISGYCKLGKM 303

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E AS++FDEM+++G  PS+VT+NVLIDG+GK G
Sbjct: 304 EKASALFDEMMSSGTLPSVVTFNVLIDGFGKVG 336



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYH---ECGGYRXX 461
           G  D A E F+ MRS+G  PD      +++   +    D   SLL +     +C      
Sbjct: 230 GKVDQAFEFFNDMRSFGCFPDIVTYNTIINGLCREYEVDRGHSLLNEIRLRDDCAPNVVT 289

Query: 460 XXXXXXXXXLMVRDNRVNDAICFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                     + +  + +       SSG  P   TFN++I G  + G++  A   +E+M 
Sbjct: 290 YTSVISGYCKLGKMEKASALFDEMMSSGTLPSVVTFNVLIDGFGKVGDMLSAKSLYEKMA 349

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GCI D+VT+ + I+G C+ G ++++ ++ + ++ + V  P+V T+    +  CK  ++
Sbjct: 350 SFGCIPDVVTFTSLINGYCQIGDVNRSFQLWDAMKVKNVS-PNVYTFAITINALCKENRL 408

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A     E+    I P    +N +IDG+ KAG
Sbjct: 409 CEACRFLRELQCRNIVPKPFIFNPVIDGFCKAG 441



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  + A  +FD M S G LP       L+  + K G+  SA SL  +    G        
Sbjct: 301 GKMEKASALFDEMMSSGTLPSVVTFNVLIDGFGKVGDMLSAKSLYEKMASFGCIPDVVTF 360

Query: 451 XXXXXXL-MVRD-NRVNDAICFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGS 278
                    + D NR        +     P+ +TF I I  LC+   +  A RF  E+  
Sbjct: 361 TSLINGYCQIGDVNRSFQLWDAMKVKNVSPNVYTFAITINALCKENRLCEACRFLRELQC 420

Query: 277 LGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKME 98
              +     +N  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G+C  G+M 
Sbjct: 421 RNIVPKPFIFNPVIDGFCKAGNLDEANRIVAEMEKKK-CDPDKVTFTILIIGHCMKGRML 479

Query: 97  DASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            A S+FD+M++ G  P  VT   LI    KAG
Sbjct: 480 KAISIFDKMLSVGCPPDYVTVRSLISCLLKAG 511



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
 Frame = -1

Query: 619 SAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXXX 440
           SAK +++ M S+G +PD      L++ Y + G+ + +  L     +              
Sbjct: 340 SAKSLYEKMASFGCIPDVVTFTSLINGYCQIGDVNRSFQLWDAM-KVKNVSPNVYTFAIT 398

Query: 439 XXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLGC 269
              + ++NR+ +A  F R    R   P  F FN +I G C+ G +D A R   EM    C
Sbjct: 399 INALCKENRLCEACRFLRELQCRNIVPKPFIFNPVIDGFCKAGNLDEANRIVAEMEKKKC 458

Query: 268 IVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
             D VT+   I G C  G++ KA  + +++ S G C PD  T   + S   K G  ++A
Sbjct: 459 DPDKVTFTILIIGHCMKGRMLKAISIFDKMLSVG-CPPDYVTVRSLISCLLKAGMPKEA 516


>ref|XP_008459827.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           isoform X2 [Cucumis melo]
          Length = 548

 Score =  217 bits (553), Expect = 3e-54
 Identities = 110/213 (51%), Positives = 144/213 (67%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL DSAK VFD MRS G LPD SI+  LVSSYA+ G FDSA + L + H C G +     
Sbjct: 123 GLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKFDSAKNFLNEVH-CYGIKVSPFV 181

Query: 451 XXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ N V++A+  FR      F PD ++FNI+I+GLCR GEID+AF FF+ MG
Sbjct: 182 YNNLLNMLVKQNLVDEAVSLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMG 241

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           + GC  DIV+YNT I+G CR  +I K H++L E+       PDV TYT + SGYCK+G M
Sbjct: 242 NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDM 301

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           + AS +FDEMV++GI+P+  T+NVLIDG+GK G
Sbjct: 302 KAASELFDEMVSSGIKPNNFTFNVLIDGFGKVG 334



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
 Frame = -1

Query: 622 DSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXX 443
           D A E F  M ++G  PD      L++ + +         LL +     G          
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTS 290

Query: 442 XXXLMVRDNRVNDAICFFR---SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                 +   +  A   F    SSG +P+ FTFN++I G  + G +  A   +E+M  LG
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNNFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
           C  D+VT  + IDG CR G++++  ++  E++ R +  P+V TY  + +  CK  ++++A
Sbjct: 351 CPPDVVTVTSLIDGYCREGEVNQGLKLWEEMKLRNLS-PNVYTYAVLINALCKENRIQEA 409

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +    + ++ + P    YN +ID + KAG
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDRFCKAG 439



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G   +A E+FD M S G  P+      L+  + K GN  SAM +  +    G        
Sbjct: 299 GDMKAASELFDEMVSSGIKPNNFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG-CPPDVVT 357

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R+  VN  +  +     R   P+ +T+ ++I  LC+   I  A  F   + 
Sbjct: 358 VTSLIDGYCREGEVNQGLKLWEEMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLK 417

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S   +     YN  ID  C+AG++D+A+ ++ E++ +  C PD  T+T +  G C  G+M
Sbjct: 418 SSEVVPKPFIYNPVIDRFCKAGQVDEANFIVAEMQEK-KCRPDKITFTILIIGNCMKGRM 476

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A S F +M+     P  +T N LI    KAG
Sbjct: 477 VEAISTFYKMIEINCIPDEITINSLISCLLKAG 509


>ref|XP_008459803.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           isoform X1 [Cucumis melo]
           gi|659071437|ref|XP_008459808.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           isoform X1 [Cucumis melo]
           gi|659071439|ref|XP_008459817.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           isoform X1 [Cucumis melo]
          Length = 588

 Score =  217 bits (553), Expect = 3e-54
 Identities = 110/213 (51%), Positives = 144/213 (67%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL DSAK VFD MRS G LPD SI+  LVSSYA+ G FDSA + L + H C G +     
Sbjct: 163 GLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKFDSAKNFLNEVH-CYGIKVSPFV 221

Query: 451 XXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ N V++A+  FR      F PD ++FNI+I+GLCR GEID+AF FF+ MG
Sbjct: 222 YNNLLNMLVKQNLVDEAVSLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMG 281

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           + GC  DIV+YNT I+G CR  +I K H++L E+       PDV TYT + SGYCK+G M
Sbjct: 282 NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGDM 341

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           + AS +FDEMV++GI+P+  T+NVLIDG+GK G
Sbjct: 342 KAASELFDEMVSSGIKPNNFTFNVLIDGFGKVG 374



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
 Frame = -1

Query: 622 DSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXX 443
           D A E F  M ++G  PD      L++ + +         LL +     G          
Sbjct: 271 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTS 330

Query: 442 XXXLMVRDNRVNDAICFFR---SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                 +   +  A   F    SSG +P+ FTFN++I G  + G +  A   +E+M  LG
Sbjct: 331 IISGYCKLGDMKAASELFDEMVSSGIKPNNFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 390

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
           C  D+VT  + IDG CR G++++  ++  E++ R +  P+V TY  + +  CK  ++++A
Sbjct: 391 CPPDVVTVTSLIDGYCREGEVNQGLKLWEEMKLRNLS-PNVYTYAVLINALCKENRIQEA 449

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +    + ++ + P    YN +ID + KAG
Sbjct: 450 RNFLRHLKSSEVVPKPFIYNPVIDRFCKAG 479



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G   +A E+FD M S G  P+      L+  + K GN  SAM +  +    G        
Sbjct: 339 GDMKAASELFDEMVSSGIKPNNFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG-CPPDVVT 397

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R+  VN  +  +     R   P+ +T+ ++I  LC+   I  A  F   + 
Sbjct: 398 VTSLIDGYCREGEVNQGLKLWEEMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLK 457

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S   +     YN  ID  C+AG++D+A+ ++ E++ +  C PD  T+T +  G C  G+M
Sbjct: 458 SSEVVPKPFIYNPVIDRFCKAGQVDEANFIVAEMQEK-KCRPDKITFTILIIGNCMKGRM 516

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A S F +M+     P  +T N LI    KAG
Sbjct: 517 VEAISTFYKMIEINCIPDEITINSLISCLLKAG 549


>ref|XP_010917211.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Elaeis guineensis]
          Length = 544

 Score =  217 bits (552), Expect = 5e-54
 Identities = 114/215 (53%), Positives = 143/215 (66%), Gaps = 4/215 (1%)
 Frame = -1

Query: 634 AGLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXX 455
           +GL ++A +VFD M S GH PDG  +    +S+A+AG  D+A+ LLA+  E    R    
Sbjct: 114 SGLHEAALKVFDQMASDGHSPDGPCLEFFANSFAEAGQLDAALKLLARASEFN-CRVRCY 172

Query: 454 XXXXXXXLMVRDNRVNDAICFFR----SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                  L+V  NR  DAI  FR    S  F PDT +FNIIIKGLCR G+ D AF FF+E
Sbjct: 173 TFNKFMNLLVGRNRAQDAIFLFREQLASQFFTPDTCSFNIIIKGLCRLGDTDGAFEFFKE 232

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           M   GC  D VT+N  +DGLC+  ++D+ HEML  I+S G+C+P+V TYT V SGYCKMG
Sbjct: 233 MRDFGCTPDTVTHNILVDGLCQTQQVDRGHEMLRRIQSDGLCVPNVVTYTSVISGYCKMG 292

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           KME+A  VF+EM+  GIRPS VTYNVLIDG+GKAG
Sbjct: 293 KMEEALEVFNEMIELGIRPSRVTYNVLIDGFGKAG 327



 Score =  103 bits (256), Expect = 1e-19
 Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 4/214 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  + A EVF+ M   G  P       L+  + KAG+  SA+S+  +   CG        
Sbjct: 292 GKMEEALEVFNEMIELGIRPSRVTYNVLIDGFGKAGDMPSAVSMYERMMVCG-CPPDVVT 350

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSG---FRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R  +++DA+  +   G    RP+ +TF I+I  LC+   I  A  F +E+ 
Sbjct: 351 FTSLIDGYSRSEKLDDALRLWNEMGQRGIRPNAYTFAIVISSLCKKNRISEASHFLKELS 410

Query: 280 SLGCIVD-IVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGK 104
               IV     YN  ID LC+ G +D+A+ +L E+  +  C PD  T+T +  G+C  G+
Sbjct: 411 ERRDIVPHAFIYNFVIDVLCKVGNLDEANILLLEMEEKR-CSPDKFTFTSLIIGHCMKGR 469

Query: 103 MEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           M +A  +F +MVA G  P  VT + L+    KAG
Sbjct: 470 MVEAIGLFHKMVATGCAPDSVTVSSLVSCLLKAG 503



 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 60/208 (28%), Positives = 88/208 (42%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D A E F  MR +G  PD      LV    +    D    +L +             
Sbjct: 221 GDTDGAFEFFKEMRDFGCTPDTVTHNILVDGLCQTQQVDRGHEMLRRIQ----------- 269

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                         +D +C        P+  T+  +I G C+ G+++ A   F EM  LG
Sbjct: 270 --------------SDGLCV-------PNVVTYTSVISGYCKMGKMEEALEVFNEMIELG 308

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
                VTYN  IDG  +AG +  A  M   +   G C PDV T+T +  GY +  K++DA
Sbjct: 309 IRPSRVTYNVLIDGFGKAGDMPSAVSMYERMMVCG-CPPDVVTFTSLIDGYSRSEKLDDA 367

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGK 8
             +++EM   GIRP+  T+ ++I    K
Sbjct: 368 LRLWNEMGQRGIRPNAYTFAIVISSLCK 395


>ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Jatropha curcas] gi|643708689|gb|KDP23605.1|
           hypothetical protein JCGZ_23438 [Jatropha curcas]
          Length = 545

 Score =  216 bits (549), Expect = 1e-53
 Identities = 106/213 (49%), Positives = 148/213 (69%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D  K VFD M+S G+LPD +++  L++S+ +AG F+ A  LLA+  +    R     
Sbjct: 121 GFHDLVKVVFDHMKSDGYLPDSTLLRFLLTSFVQAGKFNLAKKLLAEI-QSQEVRISSFV 179

Query: 451 XXXXXXLMVRDNRVNDAICFFR---SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                  +VR N+V++A+C F    +S    DT+TFNI+I+GLCR GE+DRAF FF +M 
Sbjct: 180 YNNLLNELVRRNQVHEALCLFEEHLASHSPADTWTFNILIRGLCRVGEVDRAFEFFNDME 239

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC+ DIVTYNT I+GLCR  ++D+ H++L E++SR  C PDV TYT V SG+CK GKM
Sbjct: 240 SFGCLPDIVTYNTLINGLCRVNELDRGHKLLKEVQSRNDCSPDVVTYTSVISGFCKPGKM 299

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E+AS +FDEM+ +GI+P++ T+NVLIDG+GK G
Sbjct: 300 EEASVLFDEMIRSGIKPNVFTFNVLIDGFGKIG 332



 Score =  105 bits (262), Expect = 2e-20
 Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D A E F+ M S+G LPD      L++   +    D    LL +             
Sbjct: 226 GEVDRAFEFFNDMESFGCLPDIVTYNTLINGLCRVNELDRGHKLLKEVQSRNDCSPDVVT 285

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    +  ++ +A   F     SG +P+ FTFN++I G  + G++D A    E+M 
Sbjct: 286 YTSVISGFCKPGKMEEASVLFDEMIRSGIKPNVFTFNVLIDGFGKIGDMDAAEAVREKMV 345

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC+ D+VT+ + IDG CR+G++    ++ + +++ GV  P+V TY  + +  CK  ++
Sbjct: 346 SFGCLPDVVTFTSLIDGYCRSGQVYLGLKIWDAMKAMGV-PPNVYTYAILINALCKENRL 404

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A     ++  + + P    YN +IDG+ KAG
Sbjct: 405 HEARDFLRQLKFSNVVPKPFVYNPVIDGFCKAG 437



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 56/210 (26%), Positives = 95/210 (45%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D+A+ V + M S+G LPD      L+  Y ++G     +                  
Sbjct: 332 GDMDAAEAVREKMVSFGCLPDVVTFTSLIDGYCRSGQVYLGL------------------ 373

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                       ++ DA+   ++ G  P+ +T+ I+I  LC+   +  A  F  ++    
Sbjct: 374 ------------KIWDAM---KAMGVPPNVYTYAILINALCKENRLHEARDFLRQLKFSN 418

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
            +     YN  IDG C+AG +D+A+ ++ E+  +  C PD  T+  +  G+C  G+M +A
Sbjct: 419 VVPKPFVYNPVIDGFCKAGNVDEANLIVMEMEEKR-CNPDKITFNILIIGHCMKGRMNEA 477

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
             +F +MVA G  P  +T N L+    KAG
Sbjct: 478 IDIFSKMVAIGCAPDSITINSLVSCLLKAG 507


>ref|XP_011648579.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           isoform X1 [Cucumis sativus]
           gi|778665517|ref|XP_011648580.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           isoform X1 [Cucumis sativus]
          Length = 588

 Score =  213 bits (541), Expect = 9e-53
 Identities = 111/214 (51%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL DSAK VFD MRS G LPD SI+  LVSSYA+ G  DSA + L + H C G +     
Sbjct: 163 GLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH-CYGIKVSPFV 221

Query: 451 XXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ N V++A+  FR      F PD ++FNI+I+GLCR GEID+AF FF+ MG
Sbjct: 222 YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMG 281

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNE-IRSRGVCLPDVRTYTQVASGYCKMGK 104
           + GC  DIV+YNT I+G CR  +I K H++L E +  +GV  PDV TYT + SGYCK+G 
Sbjct: 282 NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVS-PDVITYTSIISGYCKLGD 340

Query: 103 MEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           M+ AS +FDEMV++GI+P+  T+NVLIDG+GK G
Sbjct: 341 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVG 374



 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
 Frame = -1

Query: 622 DSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXX 443
           D A E F  M ++G  PD      L++ + +         LL +     G          
Sbjct: 271 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 330

Query: 442 XXXLMVRDNRVNDAICFFR---SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                 +   +  A   F    SSG +P+ FTFN++I G  + G +  A   +E+M  LG
Sbjct: 331 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 390

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
           C+ D+VT+ + IDG CR G++++  ++  E++ R +  P+V TY  + +  CK  ++ +A
Sbjct: 391 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS-PNVYTYAVLINALCKENRIREA 449

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +    + ++ + P    YN +IDG+ KAG
Sbjct: 450 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAG 479



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G   +A E+FD M S G  P+      L+  + K GN  SAM +  +    G        
Sbjct: 339 GDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCL-PDVVT 397

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R+  VN  +  +     R   P+ +T+ ++I  LC+   I  A  F   + 
Sbjct: 398 FTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLK 457

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S   +     YN  IDG C+AGK+D+A+ ++ E++ +  C PD  T+T +  G C  G+M
Sbjct: 458 SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK-KCRPDKITFTILIIGNCMKGRM 516

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A S F +M+     P  +T N LI    KAG
Sbjct: 517 VEAISTFYKMIEINCVPDEITINSLISCLLKAG 549


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           isoform X2 [Cucumis sativus]
           gi|778665521|ref|XP_011648581.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           isoform X2 [Cucumis sativus]
          Length = 548

 Score =  213 bits (541), Expect = 9e-53
 Identities = 111/214 (51%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL DSAK VFD MRS G LPD SI+  LVSSYA+ G  DSA + L + H C G +     
Sbjct: 123 GLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH-CYGIKVSPFV 181

Query: 451 XXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ N V++A+  FR      F PD ++FNI+I+GLCR GEID+AF FF+ MG
Sbjct: 182 YNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMG 241

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNE-IRSRGVCLPDVRTYTQVASGYCKMGK 104
           + GC  DIV+YNT I+G CR  +I K H++L E +  +GV  PDV TYT + SGYCK+G 
Sbjct: 242 NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVS-PDVITYTSIISGYCKLGD 300

Query: 103 MEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           M+ AS +FDEMV++GI+P+  T+NVLIDG+GK G
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVG 334



 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
 Frame = -1

Query: 622 DSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXX 443
           D A E F  M ++G  PD      L++ + +         LL +     G          
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 442 XXXLMVRDNRVNDAICFFR---SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                 +   +  A   F    SSG +P+ FTFN++I G  + G +  A   +E+M  LG
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
           C+ D+VT+ + IDG CR G++++  ++  E++ R +  P+V TY  + +  CK  ++ +A
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS-PNVYTYAVLINALCKENRIREA 409

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +    + ++ + P    YN +IDG+ KAG
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAG 439



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G   +A E+FD M S G  P+      L+  + K GN  SAM +  +    G        
Sbjct: 299 GDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCL-PDVVT 357

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R+  VN  +  +     R   P+ +T+ ++I  LC+   I  A  F   + 
Sbjct: 358 FTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLK 417

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S   +     YN  IDG C+AGK+D+A+ ++ E++ +  C PD  T+T +  G C  G+M
Sbjct: 418 SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK-KCRPDKITFTILIIGNCMKGRM 476

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A S F +M+     P  +T N LI    KAG
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAG 509


>ref|XP_008786659.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Phoenix dactylifera]
           gi|672199245|ref|XP_008777563.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like [Phoenix dactylifera]
          Length = 546

 Score =  211 bits (537), Expect = 3e-52
 Identities = 111/214 (51%), Positives = 141/214 (65%), Gaps = 4/214 (1%)
 Frame = -1

Query: 634 AGLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXX 455
           +GL ++A EVFD M S GH PDG  +    +S+A+AG  D+A+ LLA+  E    R    
Sbjct: 116 SGLHEAALEVFDQMASDGHSPDGPYLEFFANSFAEAGQLDAALKLLARASEFN-CRVRCY 174

Query: 454 XXXXXXXLMVRDNRVNDAICFFR----SSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                  L+V  NR  DAI FFR    S  F PDT +FNI+IKGLCR G+ID AF F +E
Sbjct: 175 TFNKLMSLLVGRNRAQDAIFFFREQLASQFFTPDTCSFNIVIKGLCRLGDIDGAFEFLKE 234

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           M   G   D VT+N  +DGLC+  ++D+ HE+L  I+S G+C+P+V TYT V SGYCKMG
Sbjct: 235 MRDFGLTPDTVTHNILVDGLCQTKQVDRGHEILRRIQSDGLCVPNVVTYTSVISGYCKMG 294

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKA 5
           KME+A  VF +M+  GIRPS VTYNVLIDG+GKA
Sbjct: 295 KMEEAFEVFSDMIGLGIRPSRVTYNVLIDGFGKA 328



 Score =  104 bits (260), Expect = 3e-20
 Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  + A EVF  M   G  P       L+  + KA +  SA+S+      CG        
Sbjct: 294 GKMEEAFEVFSDMIGLGIRPSRVTYNVLIDGFGKASDMPSAVSVYEGMMVCG-CPPDVVT 352

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R  +++DA+  +      G RP+ +TF+I+I  LC+   I  A  F +E+ 
Sbjct: 353 FTSLIDGYCRSEKLDDALRLWNEIGQRGIRPNVYTFSIVISSLCKKNRISEASHFLKELS 412

Query: 280 SLGCIVD-IVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGK 104
               IV     YN  IDGLC+ G +D+A+ +L E+  +  C PD  TYT +  G+C  G+
Sbjct: 413 ERRDIVPRAFIYNFVIDGLCKVGNLDEANLLLLEMEEKR-CSPDKFTYTSLIIGHCMKGR 471

Query: 103 MEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           M +A  +F +MVA G  P  VT + L+    KAG
Sbjct: 472 MVEAIGLFHKMVATGCAPDSVTVSSLVSCLLKAG 505


>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
           gi|557556032|gb|ESR66046.1| hypothetical protein
           CICLE_v10007804mg [Citrus clementina]
          Length = 595

 Score =  208 bits (529), Expect = 2e-51
 Identities = 105/214 (49%), Positives = 142/214 (66%), Gaps = 4/214 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GL DS + VFD MRS GHLP+  ++   VSS  +AG  D+A  LL+Q+   G        
Sbjct: 170 GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP-GEVTMSTFM 228

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR----PDTFTFNIIIKGLCRCGEIDRAFRFFEEM 284
                  +V+ N  ++A+  F+   FR    PDT+TFNI+I+GLCR GE+ +AF FF +M
Sbjct: 229 YNSLLNALVKQNNADEAVYMFKEY-FRLYSQPDTWTFNILIRGLCRIGEVKKAFEFFYDM 287

Query: 283 GSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGK 104
           GS GC  DIVTYNT I GLCR  ++ + HE+L E++ +   LPDV TYT V SGYCK+GK
Sbjct: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTSVISGYCKLGK 347

Query: 103 MEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           M+ A+S+++EM + GI+PS VT+NVLIDG+GK G
Sbjct: 348 MDKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D A  +++ M S G  P       L+  + K GN  SA  +  +    G Y      
Sbjct: 346 GKMDKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSLG-YLPDVVT 404

Query: 451 XXXXXXLMVRDNRVNDAICF---FRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R+ ++N  +      +     P+ +TF I+I  LC+   ++ A RF +++ 
Sbjct: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFAILINALCKENRLNDARRFLKQLK 464

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
               +     YN  IDG C+AG +D+A+ ++ E+  +  C PD  T+T +  G+C  G+M
Sbjct: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTILIIGHCMKGRM 523

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A S+F++M+  G  P  +T N LI    K G
Sbjct: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556



 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 51/192 (26%), Positives = 88/192 (45%)
 Frame = -1

Query: 577 LPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXXXXXLMVRDNRVNDAI 398
           LPD      ++S Y K G  D A S+  + + CG                          
Sbjct: 329 LPDVVTYTSVISGYCKLGKMDKATSIYNEMNSCG-------------------------- 362

Query: 397 CFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLGCIVDIVTYNTFIDGLCRA 218
                   +P   TFN++I G  + G +  A    E M SLG + D+VT+++ IDG CR 
Sbjct: 363 -------IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSLGYLPDVVTFSSLIDGYCRN 415

Query: 217 GKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDASSVFDEMVAAGIRPSLVT 38
           G++++  ++ +E++ + +  P+V T+  + +  CK  ++ DA     ++    + P    
Sbjct: 416 GQLNQGLKLCDEMKGKNLS-PNVYTFAILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474

Query: 37  YNVLIDGYGKAG 2
           YN +IDG+ KAG
Sbjct: 475 YNPVIDGFCKAG 486


>ref|XP_012444593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Gossypium raimondii]
          Length = 583

 Score =  205 bits (522), Expect = 1e-50
 Identities = 105/215 (48%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLA--QYHECGGYRXXX 458
           GL +SAK VFD  R   HLPD ++VG ++SS+A+AG+F  A  LLA  Q  E G      
Sbjct: 167 GLHESAKLVFDYARIDRHLPDDTMVGFMISSFARAGDFGMAKKLLAEIQSDEVG---IDI 223

Query: 457 XXXXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                   +M++ N++ +A+  ++ +    F PD  TFNI+I GLC+  ++D+AF FF +
Sbjct: 224 FALNNLLHMMIKQNKLEEAVSLYKENLGLNFNPDNRTFNILILGLCKARQVDKAFEFFND 283

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           M   GC  DI+TYNT I GLCRA ++D+ HE+LNEIR R  C PDV TYT V SGYCK+G
Sbjct: 284 MWIFGCFPDILTYNTIIGGLCRANEVDRGHELLNEIRLRDDCSPDVVTYTSVISGYCKLG 343

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           KM  AS++ +EM+ +G  PS VT+NVLIDG+GK G
Sbjct: 344 KMGKASALLNEMINSGTVPSAVTFNVLIDGFGKVG 378



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
 Frame = -1

Query: 622 DSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYH---ECGGYRXXXXX 452
           D A E F+ M  +G  PD      ++    +A   D    LL +     +C         
Sbjct: 275 DKAFEFFNDMWIFGCFPDILTYNTIIGGLCRANEVDRGHELLNEIRLRDDCSPDVVTYTS 334

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                  + +  + +  +    +SG  P   TFN++I G  + G++  A   +E+M S G
Sbjct: 335 VISGYCKLGKMGKASALLNEMINSGTVPSAVTFNVLIDGFGKVGDMLSAKSMYEKMVSFG 394

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
           C+ D+VT+ + IDG CR G ++++ ++ N ++ R +  P+V T++ + +  CK  ++ +A
Sbjct: 395 CVADVVTFTSLIDGYCRNGDVNRSLQLWNTMKVRNIS-PNVYTFSIIINALCKENRLHEA 453

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
             +  E+    I P    +N +IDG+ K+G
Sbjct: 454 RELLKELTCTNIVPKPFIFNPVIDGFCKSG 483



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G    A  + + M + G +P       L+  + K G+  SA S+  +    G        
Sbjct: 343 GKMGKASALLNEMINSGTVPSAVTFNVLIDGFGKVGDMLSAKSMYEKMVSFGCVADVVTF 402

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R+  VN ++  + +   R   P+ +TF+III  LC+   +  A    +E+ 
Sbjct: 403 TSLIDGYC-RNGDVNRSLQLWNTMKVRNISPNVYTFSIIINALCKENRLHEARELLKELT 461

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
               +     +N  IDG C++G +D+A+ +  E++ +  C PD  TYT +  G+C  G+M
Sbjct: 462 CTNIVPKPFIFNPVIDGFCKSGNLDEANLIAVEMKEKK-CYPDKVTYTILIIGHCMKGRM 520

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A  +FD+M++ G  P     + L+    KAG
Sbjct: 521 LEAIGIFDKMLSVGCTPDDFAVHSLVSCLFKAG 553



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 3/182 (1%)
 Frame = -1

Query: 619 SAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXXX 440
           SAK +++ M S+G + D      L+  Y + G+ + ++ L     +              
Sbjct: 382 SAKSMYEKMVSFGCVADVVTFTSLIDGYCRNGDVNRSLQLWNTM-KVRNISPNVYTFSII 440

Query: 439 XXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLGC 269
              + ++NR+++A    +    +   P  F FN +I G C+ G +D A     EM    C
Sbjct: 441 INALCKENRLHEARELLKELTCTNIVPKPFIFNPVIDGFCKSGNLDEANLIAVEMKEKKC 500

Query: 268 IVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDAS 89
             D VTY   I G C  G++ +A  + +++ S G C PD      + S   K G   +AS
Sbjct: 501 YPDKVTYTILIIGHCMKGRMLEAIGIFDKMLSVG-CTPDDFAVHSLVSCLFKAGMPNEAS 559

Query: 88  SV 83
            V
Sbjct: 560 RV 561


>ref|XP_012444589.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Gossypium raimondii]
           gi|823223686|ref|XP_012444590.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Gossypium raimondii]
           gi|823223688|ref|XP_012444592.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Gossypium raimondii]
           gi|763787479|gb|KJB54475.1| hypothetical protein
           B456_009G035900 [Gossypium raimondii]
           gi|763787480|gb|KJB54476.1| hypothetical protein
           B456_009G035900 [Gossypium raimondii]
           gi|763787481|gb|KJB54477.1| hypothetical protein
           B456_009G035900 [Gossypium raimondii]
           gi|763787482|gb|KJB54478.1| hypothetical protein
           B456_009G035900 [Gossypium raimondii]
          Length = 593

 Score =  205 bits (522), Expect = 1e-50
 Identities = 105/215 (48%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLA--QYHECGGYRXXX 458
           GL +SAK VFD  R   HLPD ++VG ++SS+A+AG+F  A  LLA  Q  E G      
Sbjct: 167 GLHESAKLVFDYARIDRHLPDDTMVGFMISSFARAGDFGMAKKLLAEIQSDEVG---IDI 223

Query: 457 XXXXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                   +M++ N++ +A+  ++ +    F PD  TFNI+I GLC+  ++D+AF FF +
Sbjct: 224 FALNNLLHMMIKQNKLEEAVSLYKENLGLNFNPDNRTFNILILGLCKARQVDKAFEFFND 283

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           M   GC  DI+TYNT I GLCRA ++D+ HE+LNEIR R  C PDV TYT V SGYCK+G
Sbjct: 284 MWIFGCFPDILTYNTIIGGLCRANEVDRGHELLNEIRLRDDCSPDVVTYTSVISGYCKLG 343

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           KM  AS++ +EM+ +G  PS VT+NVLIDG+GK G
Sbjct: 344 KMGKASALLNEMINSGTVPSAVTFNVLIDGFGKVG 378



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
 Frame = -1

Query: 622 DSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYH---ECGGYRXXXXX 452
           D A E F+ M  +G  PD      ++    +A   D    LL +     +C         
Sbjct: 275 DKAFEFFNDMWIFGCFPDILTYNTIIGGLCRANEVDRGHELLNEIRLRDDCSPDVVTYTS 334

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLG 272
                  + +  + +  +    +SG  P   TFN++I G  + G++  A   +E+M S G
Sbjct: 335 VISGYCKLGKMGKASALLNEMINSGTVPSAVTFNVLIDGFGKVGDMLSAKSMYEKMVSFG 394

Query: 271 CIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDA 92
           C+ D+VT+ + IDG CR G ++++ ++ N ++ R +  P+V T++ + +  CK  ++ +A
Sbjct: 395 CVADVVTFTSLIDGYCRNGDVNRSLQLWNTMKVRNIS-PNVYTFSIIINALCKENRLHEA 453

Query: 91  SSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
             +  E+    I P    +N +IDG+ K+G
Sbjct: 454 RELLKELTCTNIVPKPFIFNPVIDGFCKSG 483



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G    A  + + M + G +P       L+  + K G+  SA S+  +    G        
Sbjct: 343 GKMGKASALLNEMINSGTVPSAVTFNVLIDGFGKVGDMLSAKSMYEKMVSFGCVADVVTF 402

Query: 451 XXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    R+  VN ++  + +   R   P+ +TF+III  LC+   +  A    +E+ 
Sbjct: 403 TSLIDGYC-RNGDVNRSLQLWNTMKVRNISPNVYTFSIIINALCKENRLHEARELLKELT 461

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
               +     +N  IDG C++G +D+A+ +  E++ +  C PD  TYT +  G+C  G+M
Sbjct: 462 CTNIVPKPFIFNPVIDGFCKSGNLDEANLIAVEMKEKK-CYPDKVTYTILIIGHCMKGRM 520

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A  +FD+M++ G  P     + L+    KAG
Sbjct: 521 LEAIGIFDKMLSVGCTPDDFAVHSLVSCLFKAG 553



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 3/182 (1%)
 Frame = -1

Query: 619 SAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXXXXXX 440
           SAK +++ M S+G + D      L+  Y + G+ + ++ L     +              
Sbjct: 382 SAKSMYEKMVSFGCVADVVTFTSLIDGYCRNGDVNRSLQLWNTM-KVRNISPNVYTFSII 440

Query: 439 XXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMGSLGC 269
              + ++NR+++A    +    +   P  F FN +I G C+ G +D A     EM    C
Sbjct: 441 INALCKENRLHEARELLKELTCTNIVPKPFIFNPVIDGFCKSGNLDEANLIAVEMKEKKC 500

Query: 268 IVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKMEDAS 89
             D VTY   I G C  G++ +A  + +++ S G C PD      + S   K G   +AS
Sbjct: 501 YPDKVTYTILIIGHCMKGRMLEAIGIFDKMLSVG-CTPDDFAVHSLVSCLFKAGMPNEAS 559

Query: 88  SV 83
            V
Sbjct: 560 RV 561


>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Fragaria vesca subsp. vesca]
          Length = 583

 Score =  204 bits (519), Expect = 3e-50
 Identities = 103/213 (48%), Positives = 143/213 (67%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           GLQDSAK VFD MR+ G  P+ S++  LVSS A+ G  D A  +L + H C         
Sbjct: 159 GLQDSAKLVFDYMRTDGLSPNESVLEFLVSSCAQMGRSDLAEKILDEVH-CSVVGLSSFV 217

Query: 451 XXXXXXLMVRDNRVNDAICFFRS---SGFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                 ++V+ NRV++A+C FR    S   PD++TFNI+I+GLCR G +D+   FF +M 
Sbjct: 218 YNNLFNVLVKLNRVDEAVCLFRKYVGSYCCPDSWTFNILIRGLCRTGAVDKGLEFFSDMR 277

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
           S GC  ++VTYNT I GLCRA ++D+  ++L E++ R    PDV T+T V SGYCK+G+M
Sbjct: 278 SFGCSPNVVTYNTLISGLCRAHEVDRGCDLLREVQFRSELSPDVITFTSVISGYCKLGRM 337

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           E+AS++FDEM+  G++P+ VT+N LIDGYGKAG
Sbjct: 338 EEASAIFDEMIGCGLKPTAVTFNALIDGYGKAG 370



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQYHECGGYRXXXXX 452
           G  D   E F  MRS+G  P+      L+S   +A   D    LL +             
Sbjct: 264 GAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRAHEVDRGCDLLREVQFRSELSPDVIT 323

Query: 451 XXXXXXLMVRDNRVNDAICFFRSS---GFRPDTFTFNIIIKGLCRCGEIDRAFRFFEEMG 281
                    +  R+ +A   F      G +P   TFN +I G  + G++  AF  +E M 
Sbjct: 324 FTSVISGYCKLGRMEEASAIFDEMIGCGLKPTAVTFNALIDGYGKAGDMSSAFSLYESML 383

Query: 280 SLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMGKM 101
             G   D++T+ + IDG CRAG ++   ++ +E+ ++ V  P   T++ + +  CK  ++
Sbjct: 384 FHGHCADVITFTSLIDGYCRAGHLNHGLQLWHEMNAKNVS-PSAYTFSVLINALCKGNRL 442

Query: 100 EDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
            +A  +  E+  + + P    YN +IDG  KAG
Sbjct: 443 CEARDLLRELKGSNVVPKSFLYNPVIDGLCKAG 475



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
 Frame = -1

Query: 631 GLQDSAKEVFDLMRSYGHLPDGSIVGCLVSSYAKAGNFDSAMSLLAQ--YHECGGYRXXX 458
           G  + A  +FD M   G  P       L+  Y KAG+  SA SL     +H   G+    
Sbjct: 335 GRMEEASAIFDEMIGCGLKPTAVTFNALIDGYGKAGDMSSAFSLYESMLFH---GHCADV 391

Query: 457 XXXXXXXXLMVRDNRVNDAICFFRSSGFR---PDTFTFNIIIKGLCRCGEIDRAFRFFEE 287
                      R   +N  +  +     +   P  +TF+++I  LC+   +  A     E
Sbjct: 392 ITFTSLIDGYCRAGHLNHGLQLWHEMNAKNVSPSAYTFSVLINALCKGNRLCEARDLLRE 451

Query: 286 MGSLGCIVDIVTYNTFIDGLCRAGKIDKAHEMLNEIRSRGVCLPDVRTYTQVASGYCKMG 107
           +     +     YN  IDGLC+AG ID+A+ ++ E+  +  C PD  T+T +  G    G
Sbjct: 452 LKGSNVVPKSFLYNPVIDGLCKAGNIDEANLIVAEMEEK-KCTPDRVTFTILILGNSMKG 510

Query: 106 KMEDASSVFDEMVAAGIRPSLVTYNVLIDGYGKAG 2
           +M +A   F +M++ G  P  +T + LI    KAG
Sbjct: 511 RMSEAIGNFSKMLSIGCAPDKITIDSLISCLSKAG 545