BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00017241
         (1231 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair ...   476   e-131
ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair ...   471   e-130
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              429   e-117
gb|ERN15159.1| hypothetical protein AMTR_s00056p00136660 [Ambore...   422   e-115
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   421   e-115
ref|XP_009416475.1| PREDICTED: MMS19 nucleotide excision repair ...   420   e-114
ref|XP_012069081.1| PREDICTED: MMS19 nucleotide excision repair ...   420   e-114
ref|XP_012069080.1| PREDICTED: MMS19 nucleotide excision repair ...   420   e-114
ref|XP_008228424.1| PREDICTED: MMS19 nucleotide excision repair ...   420   e-114
ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prun...   419   e-114
ref|XP_011011444.1| PREDICTED: uncharacterized protein LOC105116...   417   e-114
ref|XP_007024314.1| MMS19 nucleotide excision repair protein, pu...   415   e-113
ref|XP_007024313.1| MMS19 nucleotide excision repair protein, pu...   415   e-113
ref|XP_007024312.1| MMS19 nucleotide excision repair protein, pu...   415   e-113
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu...   415   e-113
gb|KHG04543.1| MMS19 nucleotide excision repair [Gossypium arbor...   411   e-112
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr...   411   e-112
ref|XP_010665894.1| PREDICTED: MMS19 nucleotide excision repair ...   410   e-112
ref|XP_012451235.1| PREDICTED: MMS19 nucleotide excision repair ...   410   e-111
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...   410   e-111

>ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Nelumbo
            nucifera] gi|719979495|ref|XP_010249498.1| PREDICTED:
            MMS19 nucleotide excision repair protein homolog [Nelumbo
            nucifera]
          Length = 1160

 Score =  476 bits (1224), Expect = e-131
 Identities = 237/394 (60%), Positives = 299/394 (75%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MAK SSW+PH+E FVD+SR S+QQ  SLEA+A+L++ D+LT+E +VREMEMYLTT+D+ +
Sbjct: 1    MAKSSSWVPHIEAFVDSSRSSSQQNESLEALASLLRNDVLTIELLVREMEMYLTTTDNVI 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            R+RGILLL ELL RL+ KPL++ T+HSL GFFT RLADWQAL GAL+GCLALLRR ++VG
Sbjct: 61   RSRGILLLGELLARLMVKPLENVTVHSLIGFFTDRLADWQALRGALIGCLALLRRKSSVG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ +DAR++ +SYL+NLQVQSLA HDR +CFELLECLL+ Y+DAVA LGDDLVYGIC A
Sbjct: 121  MVSGSDARLVGQSYLQNLQVQSLAQHDRMLCFELLECLLDRYSDAVAALGDDLVYGICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            ID EKDP+CL+LTFH+VEVL  +F +P G ++SFAGD+F+IL  YFPI+FTH + DD  +
Sbjct: 181  IDGEKDPRCLMLTFHLVEVLAWLFPEPSGPLASFAGDIFEILGCYFPIHFTHQQGDDFDI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLSRALM AF+S+PLFEPF IP                       C L YG DR+ K
Sbjct: 241  KRDDLSRALMLAFSSSPLFEPFAIPLLLEKLSSSLPLAKVDSFRYLSHCVLKYGVDRMGK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HAKAIWSSLK+AI TFS Q   F LA + P  M  +EN++  EAL+CLE++++Q D +  
Sbjct: 301  HAKAIWSSLKDAIFTFSLQGNIFSLASDLPDTMGFEENDITKEALICLEKVILQNDGI-- 358

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ IV+DED+EMI RSVT    Y  L+ E K
Sbjct: 359  --FLSLIVDDEDVEMILRSVTISNSYNSLSVESK 390


>ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Phoenix
            dactylifera]
          Length = 1153

 Score =  471 bits (1211), Expect = e-130
 Identities = 237/381 (62%), Positives = 287/381 (75%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            M K SSWI H+E FVD+S    QQ AS++AIAALVKKDLLT+EA+VREME+YLTTSDH++
Sbjct: 1    MDKTSSWISHIEAFVDSSCAPKQQAASVDAIAALVKKDLLTLEALVREMELYLTTSDHSI 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARG+LLLAE+L  L+SKPLDSAT+ SL  FFTS+LADWQ LHGAL+GCLALLRR  NVG
Sbjct: 61   RARGMLLLAEILNCLISKPLDSATVSSLVEFFTSKLADWQVLHGALIGCLALLRRKKNVG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V  ++AR L +SYL N+QVQSLA+HDRK+CFE+L+CLLE Y +AV  LGDDLVYGIC A
Sbjct: 121  MVKSSEARALAESYLTNVQVQSLAVHDRKLCFEVLQCLLEAYPEAVEMLGDDLVYGICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            IDEEKDP+CL+LTFH+VE+L RVF D  G+++SFAGDLFDILSRYFPIYFTHP++DD  +
Sbjct: 181  IDEEKDPRCLMLTFHLVEILARVFPDSSGAVASFAGDLFDILSRYFPIYFTHPRSDDFDI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
             R+DLSRALMHAF STP FEPF IP                       C  HYG DR+ K
Sbjct: 241  TREDLSRALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGTDRMIK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HA AIWS+LK+AI   SP  T      E+  +  S+EN++A EAL+CL+  ++ LDSL  
Sbjct: 301  HAGAIWSNLKDAIFNHSPHKT-LSSTSEAAGNTESEENQIAKEALICLQTAILHLDSLEK 359

Query: 1130 YSFINFIVEDEDIEMIFRSVT 1192
               ++ IVEDEDIEM F  V+
Sbjct: 360  DPILSLIVEDEDIEMKFGLVS 380


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  429 bits (1104), Expect = e-117
 Identities = 219/394 (55%), Positives = 282/394 (71%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ S    ++E++VD+SR S QQ AS++AIA L+K D+LT+E +V EM MYLTT+D+ +
Sbjct: 1    MAQLSQLTQYIESYVDSSRSSTQQAASVDAIAYLLKNDILTLETLVTEMGMYLTTTDNII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            R RGILLLAELLTRL SKPLD+ TIHSL  FFT RLADW+AL GAL+GCLAL++R +N+G
Sbjct: 61   RTRGILLLAELLTRLASKPLDNVTIHSLISFFTDRLADWRALRGALIGCLALMKRKSNMG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             VT  DAR + ++YLEN+QVQSL  HDRK+CFE+LECLL+HY ++VA LGDDLVYGIC A
Sbjct: 121  RVTDNDARAVAQAYLENVQVQSLGQHDRKLCFEILECLLDHYPESVASLGDDLVYGICGA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            ID EKDP+CL+LTFHIVE+L R+F DP G ++SFAGDLFDIL  YFPI+FTHP+ +D+ V
Sbjct: 181  IDGEKDPRCLMLTFHIVEILARLFPDPSGPLASFAGDLFDILGCYFPIHFTHPQGEDVDV 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLSRALM AF+ST LFEPF IP                       C L YG DR+ K
Sbjct: 241  KRDDLSRALMLAFSSTTLFEPFAIPLLLEKLSSSLPLAKVDSLKYLSNCLLKYGDDRMTK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            H +AIW S+K+AI   S Q+    LA E    +  QENE+  EA++ L++++++   LS 
Sbjct: 301  HVEAIWFSVKDAIFC-SEQEPMLSLASELLDHVGFQENEIVTEAIILLQKVILENSGLS- 358

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
               ++ IV D+DI  I  +VT    Y D+  + K
Sbjct: 359  ---LSLIVGDKDINTIVNTVTSFRSYNDIPLQSK 389


>gb|ERN15159.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
          Length = 1160

 Score =  422 bits (1084), Expect = e-115
 Identities = 220/394 (55%), Positives = 272/394 (69%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA  +SWIPHVE FVD SR  +QQ ASL  IA L+KKD LT+EA+V+EME+YLTT+D ++
Sbjct: 1    MASTASWIPHVEVFVDPSRSKDQQDASLNVIATLMKKDTLTLEALVQEMEVYLTTTDASV 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            R+RGILL+AELL+ L SKP+D A IHSLT FFTSRLADWQAL GA +GCLALLRR ++ G
Sbjct: 61   RSRGILLVAELLSYLASKPIDGAIIHSLTEFFTSRLADWQALRGAFIGCLALLRRKSHTG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
            T++  D   L KS+L N+QVQ+LALHDR +C ELLECLL+ +   ++ L D+LVYG+ AA
Sbjct: 121  TISDNDLINLTKSFLLNIQVQALALHDRLLCLELLECLLDQFPSVISVLDDELVYGVLAA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            IDEEKDP+CL+L FH+VE+LV+VF DP     S A D FDIL RYFPIYFT P  D I +
Sbjct: 181  IDEEKDPRCLMLVFHVVELLVQVFPDP-----SVAKDAFDILGRYFPIYFTRPNVDAIDI 235

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KR+DLSR +M+AF+S+PLFEPF IP                       C   YG  R+A 
Sbjct: 236  KREDLSRRMMNAFSSSPLFEPFCIPLLLEKLSSSLEMAKLDALKYLSHCAPRYGPSRMAS 295

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HA AIWS+LK+ I   S    S  +  E P ++ SQENEV  EALVCLE  ++  D    
Sbjct: 296  HAYAIWSALKDVIFNLSSHGPSISIICELPDNLGSQENEVVKEALVCLENCVLVFDIPKD 355

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
             +F+  IVEDED+EM FRS+T     KDL  E K
Sbjct: 356  ETFLRLIVEDEDLEMTFRSITSEKCNKDLPHERK 389


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  421 bits (1083), Expect = e-115
 Identities = 219/394 (55%), Positives = 286/394 (72%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+P+    ++E++VDASR  +QQ ASL+AI  L+K D +T+ ++V+EMEMYLTT+D  +
Sbjct: 1    MAEPTQLTQYIESYVDASRSLSQQAASLDAIVLLLKNDAVTIGSLVKEMEMYLTTTDDII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E L+ L SKPLD+ TIHSL  FFT RLADW+AL GALVGCLAL+RR +N G
Sbjct: 61   RARGILLLGEALSHLSSKPLDNTTIHSLIAFFTERLADWRALRGALVGCLALIRRRSN-G 119

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             +T  DA+++ +SYL+NLQVQSLA +DRK+CFELLECLLE+   AVA LG+DL+YGIC A
Sbjct: 120  IITGIDAKVVAESYLQNLQVQSLAQYDRKLCFELLECLLENCPAAVASLGEDLIYGICEA 179

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            ID EKDPQCL+LTFHIVEVL ++F DP G  SSFAGD+F IL  YFPI+FTHPK +D+ V
Sbjct: 180  IDGEKDPQCLMLTFHIVEVLGKLFPDPSGPFSSFAGDIFSILGCYFPIHFTHPKAEDVDV 239

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLSRALM AF+STPLFEPF +P                       CTL + ADRIA+
Sbjct: 240  KRDDLSRALMLAFSSTPLFEPFAMPLLLEKLSSSLPTAKVDSLKYLSYCTLKFRADRIAE 299

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HA AIWSSLK+AI + S ++       ES     S++NE+A EAL+ LE ++VQ ++   
Sbjct: 300  HAGAIWSSLKDAIYS-SGEEPMLSSDLESVDSPGSEKNEIATEALLLLENLIVQNNNF-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ I+ DE+++MIF ++T    Y +++ + K
Sbjct: 357  --FLSMIISDEEVKMIFNTITSYKSYNEISLQSK 388


>ref|XP_009416475.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Musa
            acuminata subsp. malaccensis]
          Length = 1122

 Score =  420 bits (1080), Expect = e-114
 Identities = 215/392 (54%), Positives = 275/392 (70%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            M KP+SWI HVE FVD++R SNQQ AS++AIA LV +DLLT+E +VREME YLT SDH +
Sbjct: 1    MEKPNSWIAHVEAFVDSARASNQQAASVDAIAVLVHEDLLTLEGLVREMEQYLTASDHVI 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL+E+L+RL+ KPLDS T+ SL  FFTS+L DWQAL GAL+GCLALL+R+   G
Sbjct: 61   RARGILLLSEVLSRLLEKPLDSRTVSSLVEFFTSKLEDWQALRGALIGCLALLKRTKKFG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V   DA+ L +S+L N+QVQSLA+ DRK+CFE+++ LL+ Y  AV  LGDDLVYGIC A
Sbjct: 121  MVESNDAKSLAESFLRNVQVQSLAVRDRKLCFEVIQRLLDVYPQAVVELGDDLVYGICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            IDEEKDP+CL+LTF +V  L R+F DP G + +F+ D+FDILSRYFPIYFTH K D + +
Sbjct: 181  IDEEKDPRCLMLTFSLVGTLGRLFPDPSGPMGNFSSDVFDILSRYFPIYFTHSKGDGLDI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
             RDDLS+ALM AF+S+PLFEPFVIP                       C  HY AD++ K
Sbjct: 241  TRDDLSKALMDAFSSSPLFEPFVIPLLLEKLSSSLPSAKLDSLKYLNSCLRHYEADKVVK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            H++ IWS+LK+ I   SP  +S L  + S  DM S+ N++A EAL CL+  +  L+    
Sbjct: 301  HSQVIWSNLKDVIFNLSPHRSS-LSTYGSNGDMDSEVNQIADEALNCLQTAISHLNFPDQ 359

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAE 1225
             SF+  I++DEDI   F SVT +  Y   + E
Sbjct: 360  DSFLCLIIDDEDIGTRFWSVTSIKKYSGTSTE 391


>ref|XP_012069081.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Jatropha curcas]
          Length = 1136

 Score =  420 bits (1079), Expect = e-114
 Identities = 220/394 (55%), Positives = 283/394 (71%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+PS    H+E++VD+SR S QQ ASL+AI +L+K D +T+ ++V+EM++YLTT+D  L
Sbjct: 1    MAEPSKLTQHIESYVDSSRSSTQQAASLDAIVSLLKNDAVTIGSLVKEMDLYLTTTDDIL 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E L RL SK LD+ATIHSL  FF  RLADW+AL GALVGCLAL+RR +  G
Sbjct: 61   RARGILLLGEALVRLSSKTLDNATIHSLITFFAERLADWRALRGALVGCLALIRRKSG-G 119

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             VT  DA+ + KSYL NLQVQSLA HDRK+CFELLECLLEHY   VA +G+DL+YGIC A
Sbjct: 120  KVTGFDAKAIAKSYLLNLQVQSLAQHDRKLCFELLECLLEHYPVDVATMGEDLIYGICEA 179

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            ID E+DPQCL+LTFHIVE+LV++F +P   ISSFAGDLF IL  YFPI+FTHPK +DI  
Sbjct: 180  IDGERDPQCLMLTFHIVELLVQLFTEPCSPISSFAGDLFGILGCYFPIHFTHPKAEDIDF 239

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLSRALM AF+STPLFEPF +P                       CTL +GADR++K
Sbjct: 240  KRDDLSRALMLAFSSTPLFEPFAMPLLLEKLSSSLPSAKVDSLKYLSYCTLKFGADRMSK 299

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HA+A+WSSLK+AI   S ++       ES +D   ++NE+A EAL  LE++++Q + L  
Sbjct: 300  HARALWSSLKDAI-YISGEEPMQSSNSESLEDSDFKKNEIAEEALGLLEKLIIQNNDL-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ I +DE+I +IF ++T    Y ++  + K
Sbjct: 357  --FLSMITDDEEINLIFNNITSYQSYNEIPMQSK 388


>ref|XP_012069080.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Jatropha curcas]
          Length = 1137

 Score =  420 bits (1079), Expect = e-114
 Identities = 220/394 (55%), Positives = 283/394 (71%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+PS    H+E++VD+SR S QQ ASL+AI +L+K D +T+ ++V+EM++YLTT+D  L
Sbjct: 1    MAEPSKLTQHIESYVDSSRSSTQQAASLDAIVSLLKNDAVTIGSLVKEMDLYLTTTDDIL 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E L RL SK LD+ATIHSL  FF  RLADW+AL GALVGCLAL+RR +  G
Sbjct: 61   RARGILLLGEALVRLSSKTLDNATIHSLITFFAERLADWRALRGALVGCLALIRRKSG-G 119

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             VT  DA+ + KSYL NLQVQSLA HDRK+CFELLECLLEHY   VA +G+DL+YGIC A
Sbjct: 120  KVTGFDAKAIAKSYLLNLQVQSLAQHDRKLCFELLECLLEHYPVDVATMGEDLIYGICEA 179

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            ID E+DPQCL+LTFHIVE+LV++F +P   ISSFAGDLF IL  YFPI+FTHPK +DI  
Sbjct: 180  IDGERDPQCLMLTFHIVELLVQLFTEPCSPISSFAGDLFGILGCYFPIHFTHPKAEDIDF 239

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLSRALM AF+STPLFEPF +P                       CTL +GADR++K
Sbjct: 240  KRDDLSRALMLAFSSTPLFEPFAMPLLLEKLSSSLPSAKVDSLKYLSYCTLKFGADRMSK 299

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HA+A+WSSLK+AI   S ++       ES +D   ++NE+A EAL  LE++++Q + L  
Sbjct: 300  HARALWSSLKDAI-YISGEEPMQSSNSESLEDSDFKKNEIAEEALGLLEKLIIQNNDL-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ I +DE+I +IF ++T    Y ++  + K
Sbjct: 357  --FLSMITDDEEINLIFNNITSYQSYNEIPMQSK 388


>ref|XP_008228424.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Prunus
            mume]
          Length = 1159

 Score =  420 bits (1079), Expect = e-114
 Identities = 214/394 (54%), Positives = 279/394 (70%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ +  I H+E +VD SR   +Q ASL +I +LVK D LT+E +V+EM MYLTT+D+ +
Sbjct: 1    MAETTELIRHIELYVDTSRSPTEQAASLNSIISLVKSDFLTIEVLVKEMRMYLTTTDNVI 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLLAE+LT L SKPLD+ATIHSL GFFT RLADW+AL GALVGCLALLRR  N G
Sbjct: 61   RARGILLLAEVLTGLASKPLDNATIHSLIGFFTDRLADWRALRGALVGCLALLRRKVNAG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ +DA+++ +SY+E+LQVQSL  HDRK+CFELLECLLE + + +A LG+   YGIC A
Sbjct: 121  MVSASDAKLVAQSYIESLQVQSLGQHDRKLCFELLECLLERHPNEIASLGETFFYGICQA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+LTF IVE LVR++ DP GS++SF GDLF++L  YFPI+FTH K++D  V
Sbjct: 181  MDGEKDPHCLMLTFPIVETLVRIYPDPSGSLASFCGDLFELLGSYFPIHFTHLKDEDAEV 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLS+ALM AF+STPLFEPFVIP                       CT  YGADR+AK
Sbjct: 241  KRDDLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HA AIW SLK+AI   S +  +     E    +  QENE+A EAL+ L+++ +Q ++L  
Sbjct: 301  HAGAIWISLKDAISN-SLEKPAMSFTSEPLYGLGFQENEIATEALMLLQKVTLQNEAL-- 357

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ I++DE I ++F S+     Y ++  +GK
Sbjct: 358  --FLSLIIQDEGINIVFNSIASHEHYNNIPLQGK 389


>ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
            gi|462413691|gb|EMJ18740.1| hypothetical protein
            PRUPE_ppa023072mg [Prunus persica]
          Length = 1158

 Score =  419 bits (1077), Expect = e-114
 Identities = 215/395 (54%), Positives = 279/395 (70%), Gaps = 1/395 (0%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ +  I H+E +VD SR   +Q ASL +I +LVK D LT+E +V+EM MYLTT+D+ +
Sbjct: 1    MAETTELIQHIELYVDTSRSPTEQAASLNSIISLVKSDFLTIEVLVKEMRMYLTTTDNVI 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLLAE+LT L SKPLD+ATIHSL GFFT RLADW+AL GALVGCLALLRR  N G
Sbjct: 61   RARGILLLAEVLTGLASKPLDNATIHSLIGFFTDRLADWRALRGALVGCLALLRRKVNAG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ +D +++ +SY+E+LQVQSL  HDRK+CFELLECLLE + + +A LG+   YGIC A
Sbjct: 121  MVSASDGKLVAQSYIESLQVQSLGQHDRKLCFELLECLLERHPNEIASLGETFFYGICQA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+LTF IVE LVR++ DP GS++SF GDLF++L  YFPI+FTH K++D  V
Sbjct: 181  MDGEKDPHCLMLTFPIVETLVRIYPDPSGSLASFCGDLFELLGSYFPIHFTHLKDEDAEV 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLS+ALM AF+STPLFEPFVIP                       CT  YGADR+AK
Sbjct: 241  KRDDLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAK 300

Query: 950  HAKAIWSSLKEAIC-TFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLS 1126
            HA AIW SLK+AI  +    D SF    E    +  QENE+A EAL+ L+++ +Q ++L 
Sbjct: 301  HAGAIWISLKDAISNSLEKPDMSF--TSEPLYGLGFQENEIATEALMLLQKVTLQNEAL- 357

Query: 1127 GYSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
               F++ I++DE I ++F S+     Y ++  +GK
Sbjct: 358  ---FLSLIIQDEGINIVFNSIASHEHYNNIPLQGK 389


>ref|XP_011011444.1| PREDICTED: uncharacterized protein LOC105116012 isoform X1 [Populus
            euphratica]
          Length = 1148

 Score =  417 bits (1073), Expect = e-114
 Identities = 225/385 (58%), Positives = 279/385 (72%), Gaps = 3/385 (0%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+PS    H+E+FVD+SR S QQ ASL+AI + VK D++T+ ++V+EMEMYLTT+D  +
Sbjct: 1    MAEPSQLTQHIESFVDSSRSSTQQAASLDAIVSFVKNDIVTIPSLVKEMEMYLTTTDSII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E +  L SKPLD+ATIHSL  FF  RLADW+AL GALVGCLAL++R +  G
Sbjct: 61   RARGILLLGEAIKCLSSKPLDAATIHSLMSFFKERLADWRALRGALVGCLALVKRKSG-G 119

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             VT +DA+ + +S+L+NLQVQSL  HDRK+CFEL+ECLLE+Y  AVA LGDDL+YGIC A
Sbjct: 120  MVTSSDAKGVAESFLQNLQVQSLGQHDRKLCFELMECLLEYYPLAVASLGDDLIYGICEA 179

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPK-NDDIH 766
            ID EKDPQCL+L FHI+EVLV+VF +P   I SFA DLF ILS YFPI+FTH K  +D+ 
Sbjct: 180  IDGEKDPQCLMLAFHIMEVLVQVFPEPCSPIESFASDLFGILSSYFPIHFTHAKAEEDVE 239

Query: 767  VKRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIA 946
            VKRDDLSRALM AF+S+PLFEP VIP                       CT  YGA+RIA
Sbjct: 240  VKRDDLSRALMLAFSSSPLFEPSVIPLLLEKLSSSLSSAKVDSLKYLSYCTSKYGAERIA 299

Query: 947  KHAKAIWSSLKEAICTFSPQDTSFLLAF--ESPKDMRSQENEVAAEALVCLERIMVQLDS 1120
            KHA AIWSSLK+AI T      SF+L+F  ES   +  QENE+AAEAL  LE++++Q  +
Sbjct: 300  KHAGAIWSSLKDAIFT---SGQSFVLSFTPESLGGLGCQENEIAAEALALLEKVVIQNSN 356

Query: 1121 LSGYSFINFIVEDEDIEMIFRSVTG 1195
            L    F + IV DE+I M+  S+TG
Sbjct: 357  L----FSSMIVGDEEINMVLNSITG 377


>ref|XP_007024314.1| MMS19 nucleotide excision repair protein, putative isoform 5
            [Theobroma cacao] gi|508779680|gb|EOY26936.1| MMS19
            nucleotide excision repair protein, putative isoform 5
            [Theobroma cacao]
          Length = 1157

 Score =  415 bits (1066), Expect = e-113
 Identities = 214/394 (54%), Positives = 279/394 (70%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ S  I  +E+FVD++R   QQ ASL+ IA+L+K + LT+E +VREME YLTT+D+ +
Sbjct: 1    MAETSQLIQGIESFVDSTRSPTQQAASLDVIASLLKNNQLTIETLVREMEGYLTTADNII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E+L  L SKPLD ATIHSL  FFT RLADW+AL GALVGCLALLRR ++ G
Sbjct: 61   RARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSGG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ TDA+ + +SYL+NLQVQSL  +DRK+CFELL CLLE Y  A+A LGD+L+YGIC A
Sbjct: 121  IVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLIYGICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+L FHI+E+L ++F DPLG  +SFA DLF+ LS YFP++FTHPK +D+++
Sbjct: 181  VDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTHPKGEDVNI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDL+RALM AF+STPLFEPF IP                       CT+ YG DR+AK
Sbjct: 241  KRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVKYGVDRMAK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            H +A+WSSLK+A+  F+  D       ES + +   ENE+AAEAL  L++++VQ  +   
Sbjct: 301  HGEALWSSLKDAV--FTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIVQNTNF-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ IV DEDI MIF  ++    Y  + A+ K
Sbjct: 357  --FLDLIVVDEDINMIFNMISSYKSYHGIPAQSK 388


>ref|XP_007024313.1| MMS19 nucleotide excision repair protein, putative isoform 4
            [Theobroma cacao] gi|508779679|gb|EOY26935.1| MMS19
            nucleotide excision repair protein, putative isoform 4
            [Theobroma cacao]
          Length = 1136

 Score =  415 bits (1066), Expect = e-113
 Identities = 214/394 (54%), Positives = 279/394 (70%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ S  I  +E+FVD++R   QQ ASL+ IA+L+K + LT+E +VREME YLTT+D+ +
Sbjct: 1    MAETSQLIQGIESFVDSTRSPTQQAASLDVIASLLKNNQLTIETLVREMEGYLTTADNII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E+L  L SKPLD ATIHSL  FFT RLADW+AL GALVGCLALLRR ++ G
Sbjct: 61   RARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSGG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ TDA+ + +SYL+NLQVQSL  +DRK+CFELL CLLE Y  A+A LGD+L+YGIC A
Sbjct: 121  IVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLIYGICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+L FHI+E+L ++F DPLG  +SFA DLF+ LS YFP++FTHPK +D+++
Sbjct: 181  VDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTHPKGEDVNI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDL+RALM AF+STPLFEPF IP                       CT+ YG DR+AK
Sbjct: 241  KRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVKYGVDRMAK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            H +A+WSSLK+A+  F+  D       ES + +   ENE+AAEAL  L++++VQ  +   
Sbjct: 301  HGEALWSSLKDAV--FTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIVQNTNF-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ IV DEDI MIF  ++    Y  + A+ K
Sbjct: 357  --FLDLIVVDEDINMIFNMISSYKSYHGIPAQSK 388


>ref|XP_007024312.1| MMS19 nucleotide excision repair protein, putative isoform 3
            [Theobroma cacao] gi|508779678|gb|EOY26934.1| MMS19
            nucleotide excision repair protein, putative isoform 3
            [Theobroma cacao]
          Length = 1062

 Score =  415 bits (1066), Expect = e-113
 Identities = 214/394 (54%), Positives = 279/394 (70%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ S  I  +E+FVD++R   QQ ASL+ IA+L+K + LT+E +VREME YLTT+D+ +
Sbjct: 1    MAETSQLIQGIESFVDSTRSPTQQAASLDVIASLLKNNQLTIETLVREMEGYLTTADNII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E+L  L SKPLD ATIHSL  FFT RLADW+AL GALVGCLALLRR ++ G
Sbjct: 61   RARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSGG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ TDA+ + +SYL+NLQVQSL  +DRK+CFELL CLLE Y  A+A LGD+L+YGIC A
Sbjct: 121  IVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLIYGICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+L FHI+E+L ++F DPLG  +SFA DLF+ LS YFP++FTHPK +D+++
Sbjct: 181  VDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTHPKGEDVNI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDL+RALM AF+STPLFEPF IP                       CT+ YG DR+AK
Sbjct: 241  KRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVKYGVDRMAK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            H +A+WSSLK+A+  F+  D       ES + +   ENE+AAEAL  L++++VQ  +   
Sbjct: 301  HGEALWSSLKDAV--FTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIVQNTNF-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ IV DEDI MIF  ++    Y  + A+ K
Sbjct: 357  --FLDLIVVDEDINMIFNMISSYKSYHGIPAQSK 388


>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao]
          Length = 1149

 Score =  415 bits (1066), Expect = e-113
 Identities = 214/394 (54%), Positives = 279/394 (70%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ S  I  +E+FVD++R   QQ ASL+ IA+L+K + LT+E +VREME YLTT+D+ +
Sbjct: 1    MAETSQLIQGIESFVDSTRSPTQQAASLDVIASLLKNNQLTIETLVREMEGYLTTADNII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E+L  L SKPLD ATIHSL  FFT RLADW+AL GALVGCLALLRR ++ G
Sbjct: 61   RARGILLLGEVLMHLASKPLDDATIHSLIQFFTDRLADWRALRGALVGCLALLRRKSSGG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ TDA+ + +SYL+NLQVQSL  +DRK+CFELL CLLE Y  A+A LGD+L+YGIC A
Sbjct: 121  IVSETDAKAVAESYLQNLQVQSLGKYDRKLCFELLLCLLERYPKAIASLGDNLIYGICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+L FHI+E+L ++F DPLG  +SFA DLF+ LS YFP++FTHPK +D+++
Sbjct: 181  VDGEKDPHCLMLIFHIIEILPQLFPDPLGPFTSFAHDLFENLSYYFPVHFTHPKGEDVNI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDL+RALM AF+STPLFEPF IP                       CT+ YG DR+AK
Sbjct: 241  KRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVKYGVDRMAK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            H +A+WSSLK+A+  F+  D       ES + +   ENE+AAEAL  L++++VQ  +   
Sbjct: 301  HGEALWSSLKDAV--FTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIVQNTNF-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ IV DEDI MIF  ++    Y  + A+ K
Sbjct: 357  --FLDLIVVDEDINMIFNMISSYKSYHGIPAQSK 388


>gb|KHG04543.1| MMS19 nucleotide excision repair [Gossypium arboreum]
          Length = 1134

 Score =  411 bits (1056), Expect = e-112
 Identities = 216/394 (54%), Positives = 282/394 (71%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+PS    ++E+FVD+SR   QQ ASLEAIA+L+K + LT+E +VREME YLTT D+ +
Sbjct: 1    MAEPSQLSQYIESFVDSSRSPTQQAASLEAIASLLKNNQLTIETLVREMEGYLTTVDNII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E+L RL +KPLD ATI SL GFFT RLADW+AL GALVGCLAL+RR ++ G
Sbjct: 61   RARGILLLGEVLVRLATKPLDDATIRSLIGFFTDRLADWRALRGALVGCLALMRRKSSGG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ +DA+ + +SYL+NLQVQSL  ++RK+ FEL+ECLLE Y +AVA LGD L+YGIC +
Sbjct: 121  MVSGSDAKAVAESYLQNLQVQSLGQYERKLSFELMECLLERYPNAVASLGDTLIYGICES 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+LTFHI+EVL R+F DP  +++ FA +LF+IL  YFPI+FTH K++D+ +
Sbjct: 181  VDGEKDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTHQKDEDMTI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDL+RALM AF+STPLFEP+ IP                       CT+ YGADR+AK
Sbjct: 241  KRDDLARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSLRYLTDCTMKYGADRMAK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            H +AIWSSLKEAI  F+  D+  L   ES +     +NE+AAEAL  L++ +VQ   L  
Sbjct: 301  HIEAIWSSLKEAI--FTSLDSVLLFTPESLEGSDLPKNEIAAEALSLLQKHIVQNTKL-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ IV DEDI MIF +++    Y ++  E K
Sbjct: 357  --FLDLIVGDEDISMIFNTISYYKNYHEIPLERK 388


>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
            gi|557528866|gb|ESR40116.1| hypothetical protein
            CICLE_v10024743mg [Citrus clementina]
          Length = 1155

 Score =  411 bits (1056), Expect = e-112
 Identities = 213/394 (54%), Positives = 276/394 (70%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ S  I H+E+FV+ S     Q ASL+ IA+L+KK++LT+E +VREM MYLTT+D  +
Sbjct: 1    MAEASQLIQHIESFVNLSSSPTHQAASLDVIASLLKKNVLTIETLVREMGMYLTTTDDVI 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL ELLT L SKPLD ATIHS+  FFT RLADW+AL GALVGCLALLRR ++ G
Sbjct: 61   RARGILLLGELLTHLASKPLDDATIHSMLAFFTDRLADWKALRGALVGCLALLRRKSSGG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             +T  DA+ + +SY++NLQVQSLA HDRK+CFELLECLL+ Y DAV  LG+DL+Y IC A
Sbjct: 121  VITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGEDLLYAICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+LTFHIVEV   +F D L  +++FAGDLF+IL  YFPI+FTH K +D  V
Sbjct: 181  VDGEKDPHCLMLTFHIVEVAAELFSDDL--LANFAGDLFEILGCYFPIHFTHSKAEDFDV 238

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLSRALM AF+ST LFEPF IP                       CT+ YGADRI K
Sbjct: 239  KRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGADRIEK 298

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HAKA+WSS+K+AI  +S  + +   A ES   +  ++N +  E+L  L+ +  Q   L  
Sbjct: 299  HAKAMWSSIKDAI--YSSHEPTLSFASESLDGVGFRDNVILTESLNLLDTVFKQNSGL-- 354

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F+++I+ DEDI +IF+S++    YK+++ + K
Sbjct: 355  --FLSWIIGDEDINLIFKSISSFKTYKEISLQSK 386


>ref|XP_010665894.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Beta vulgaris subsp. vulgaris]
            gi|870843270|gb|KMS96482.1| hypothetical protein
            BVRB_9g224750 [Beta vulgaris subsp. vulgaris]
          Length = 1139

 Score =  410 bits (1055), Expect = e-112
 Identities = 207/376 (55%), Positives = 269/376 (71%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            M   SS + H+E+FVD+S  S+QQ  S+ +IA+L+K D++TME +VREME+YLTT+DH L
Sbjct: 1    MESQSSLVKHIESFVDSSSSSDQQSTSVNSIASLLKNDIITMEYLVREMELYLTTTDHIL 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLLAE+L  L +KPLDS +IH+L GFF+ RLADW+AL GALVGCLAL++R TN G
Sbjct: 61   RARGILLLAEVLGHLQTKPLDSTSIHTLVGFFSERLADWRALRGALVGCLALVKRKTNAG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             +T  DA+ML +S+LENLQVQSL  HDRK+CFELLECLL+ + +++A LGD +VYG+C A
Sbjct: 121  VITGVDAKMLAQSFLENLQVQSLGQHDRKLCFELLECLLDRHPESLAALGDHIVYGVCEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            I+ EKDPQCL+  FHIVE L   F DP G ++SFA DLFDI+ RYFPI++THPK++D+ V
Sbjct: 181  IEGEKDPQCLMHVFHIVEGLAHNFPDPSGPVASFAEDLFDIIGRYFPIHYTHPKSEDVDV 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
             RDDLSRALM AF+++P FEPF IP                       CT+ YG +RIAK
Sbjct: 241  SRDDLSRALMMAFSASPFFEPFSIPLLLEKLSSNLPLAKLDSLKYLSYCTVKYGPERIAK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HA+AIWSSLK AIC    +D S   A E    M  QENE+  EAL  L+++  Q  +   
Sbjct: 301  HAEAIWSSLKPAICNLPSEDVS-SWASELSDGMGFQENEITKEALDLLQKVASQQKN--- 356

Query: 1130 YSFINFIVEDEDIEMI 1177
              F+N +++D+DI  +
Sbjct: 357  -GFLNLVLKDKDINCL 371


>ref|XP_012451235.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Gossypium raimondii] gi|763801227|gb|KJB68182.1|
            hypothetical protein B456_010G230600 [Gossypium
            raimondii]
          Length = 1152

 Score =  410 bits (1054), Expect = e-111
 Identities = 216/394 (54%), Positives = 280/394 (71%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+P     ++E+FVD+SR   QQ ASLEAIA+L+K + LT+E +VREME YLTT D+ +
Sbjct: 1    MAEPIQLSRYIESFVDSSRSPTQQAASLEAIASLLKNNQLTIETLVREMEGYLTTVDNII 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL E+L RL SKPL  ATIHSL GFFT RLADW+AL GALVGCLAL+RR ++ G
Sbjct: 61   RARGILLLGEVLVRLASKPLGDATIHSLIGFFTDRLADWRALRGALVGCLALMRRKSSGG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             V+ +DA+ + +SYL+NLQVQSL   +RK+ FEL+ECLLE Y +AVA LGD L+YGIC +
Sbjct: 121  MVSGSDAKAVAESYLQNLQVQSLGQFERKLSFELMECLLERYPNAVASLGDTLIYGICES 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            +D EKDP CL+LTFHI+EVL R+F DP  +++ FA +LF+IL  YFPI+FTH K++D+ +
Sbjct: 181  VDGEKDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTHQKDEDMTI 240

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDL+RALM AF+STPLFEP+ IP                       CT+ YGADR+AK
Sbjct: 241  KRDDLARALMLAFSSTPLFEPYAIPLLLEKLSSSLPSAKLDSLRYLTDCTMKYGADRMAK 300

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            H +AIWSSLKEAI  F   D+  L   ES +     +NE+AAEAL  L++++VQ   L  
Sbjct: 301  HIEAIWSSLKEAI--FISLDSVLLFTPESLEGPDLPKNEIAAEALSLLQKLIVQNTKL-- 356

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F++ IV DEDI MIF +++    Y ++  E K
Sbjct: 357  --FLDLIVGDEDISMIFNTISNYKNYHEIPLERK 388


>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Citrus sinensis]
          Length = 1151

 Score =  410 bits (1053), Expect = e-111
 Identities = 213/394 (54%), Positives = 275/394 (69%)
 Frame = +2

Query: 50   MAKPSSWIPHVETFVDASRPSNQQVASLEAIAALVKKDLLTMEAVVREMEMYLTTSDHAL 229
            MA+ S  I H+E+FV+ S     Q ASL+ IA+L+KK++LT+E +VREM MYLTT+D  +
Sbjct: 1    MAEASQLIQHIESFVNLSSSPTHQAASLDVIASLLKKNVLTIETLVREMGMYLTTTDDVI 60

Query: 230  RARGILLLAELLTRLVSKPLDSATIHSLTGFFTSRLADWQALHGALVGCLALLRRSTNVG 409
            RARGILLL ELLT L SKPLD ATIHS+  FFT RLADW+AL GALVGCLALLRR ++ G
Sbjct: 61   RARGILLLGELLTHLASKPLDDATIHSMLAFFTDRLADWKALRGALVGCLALLRRKSSGG 120

Query: 410  TVTVTDARMLMKSYLENLQVQSLALHDRKMCFELLECLLEHYADAVAPLGDDLVYGICAA 589
             +T  DA+ + +SY++NLQVQSLA HDRK+CFELLECLL+ Y DAV  LG+DL+Y IC A
Sbjct: 121  VITTNDAKAVAQSYIQNLQVQSLAQHDRKLCFELLECLLQRYPDAVVSLGEDLLYAICEA 180

Query: 590  IDEEKDPQCLLLTFHIVEVLVRVFHDPLGSISSFAGDLFDILSRYFPIYFTHPKNDDIHV 769
            ID EKDP CL+LTFHIVEV   +F D L  +++FA DLF+IL  YFPI+FTH K +D  V
Sbjct: 181  IDGEKDPHCLMLTFHIVEVAAELFSDDL--LANFASDLFEILGCYFPIHFTHSKAEDFDV 238

Query: 770  KRDDLSRALMHAFASTPLFEPFVIPXXXXXXXXXXXXXXXXXXXXXXXCTLHYGADRIAK 949
            KRDDLSRALM AF+ST LFEPF IP                       CT+ YGADRI K
Sbjct: 239  KRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGADRIEK 298

Query: 950  HAKAIWSSLKEAICTFSPQDTSFLLAFESPKDMRSQENEVAAEALVCLERIMVQLDSLSG 1129
            HAKA+WSS+K+A+  +S  + +   A ES   +  +EN +  E+L  L+ +  Q   L  
Sbjct: 299  HAKAMWSSIKDAV--YSSHEPTLSFASESLDGVGFRENVILTESLNLLDTVFKQNSGL-- 354

Query: 1130 YSFINFIVEDEDIEMIFRSVTGVLGYKDLTAEGK 1231
              F+++I+ DEDI +IF+S++    YK+++ + K
Sbjct: 355  --FLSWIIGDEDINLIFKSISSYKTYKEISLQSK 386