BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00016603
         (1555 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC ...   545   e-152
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   526   e-146
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   526   e-146
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ...   498   e-138
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]      498   e-138
ref|XP_006853783.2| PREDICTED: RNA polymerase sigma factor sigC ...   494   e-137
gb|ERN15250.1| hypothetical protein AMTR_s00056p00209700 [Ambore...   494   e-137
ref|XP_010909938.1| PREDICTED: RNA polymerase sigma factor sigC ...   491   e-136
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   489   e-135
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   487   e-134
ref|XP_008799751.1| PREDICTED: RNA polymerase sigma factor sigC ...   483   e-133
gb|KDO79960.1| hypothetical protein CISIN_1g009449mg [Citrus sin...   474   e-131
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...   474   e-131
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...   474   e-130
ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC ...   473   e-130
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...   469   e-129
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC ...   469   e-129
ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-...   468   e-129
ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-...   463   e-127
gb|AKC88685.1| sigma factor [Francoa sonchifolia]                     460   e-126

>ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera]
            gi|720088207|ref|XP_010244379.1| PREDICTED: RNA
            polymerase sigma factor sigC [Nelumbo nucifera]
          Length = 558

 Score =  545 bits (1404), Expect = e-152
 Identities = 284/519 (54%), Positives = 372/519 (71%), Gaps = 6/519 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            R +EA  ESA+MS LS+IPEESET  KD LK Y C  G LQ + + YAA  G+KMN   K
Sbjct: 31   RSREAYFESARMSFLSVIPEESETLQKDPLKAYACSSGTLQPVNNGYAAI-GVKMNTS-K 88

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
            E     ++ F D+++   ED+S  L S  +   + F+LLMEN+++IE+ F  SD + LE+
Sbjct: 89   EFHNSLYDTFEDISIATPEDSSAFLASLQARKISCFSLLMENVEKIEDIFVSSDLIRLEK 148

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
             IL+Q+ +LGAL LFHACLSRTVK   A+ +   L + SK   +   M   +D+ITV S 
Sbjct: 149  GILVQLEKLGALNLFHACLSRTVKVSSALNLHSALKECSKKYLMDGEMSDHVDHITVPSR 208

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSK------SVNLVRQLTKSSNPKRRRFAVARNEME 852
            +K  RK  RER + + +K   +    K        + +    + ++ K RR  +ARNE E
Sbjct: 209  RKEERKLRRERESKRASKKPALKSSPKCGIGGPQQSTISIAKRPASAKSRRLMIARNESE 268

Query: 851  MAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSA 672
            M++ +K ++ LERIRS LEE +GR  S +SWA A G+ EK LQQRLHFGW+CRD LL+S 
Sbjct: 269  MSRAVKEVSCLERIRSNLEEELGRVISFSSWAEAVGLDEKELQQRLHFGWYCRDKLLRST 328

Query: 671  HSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLI 492
             SLV+Y+ARNYR  GI+ EDLLQAGN GVLQGAERFDHTRGYRFSTYVQYWIRKSMS+L+
Sbjct: 329  RSLVVYLARNYRGLGIAFEDLLQAGNFGVLQGAERFDHTRGYRFSTYVQYWIRKSMSTLV 388

Query: 491  TQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRA 312
             QHS+G+ IP+TL+  I Q  K R+S + ++G +P D+EI+K  G+SVA +RLA KC R 
Sbjct: 389  AQHSRGVHIPLTLSRAINQIHKTRKSFFNTHGRYPDDDEISKCTGLSVAKVRLAGKCLRV 448

Query: 311  MGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRF 132
            +GSIDQK+GD + VKF EF PDT++KTPE+IVM+QH++K+I +LL+ LHPRER+VLVLR+
Sbjct: 449  VGSIDQKMGDSLTVKFMEFMPDTSIKTPEDIVMRQHMRKDIHKLLQGLHPRERKVLVLRY 508

Query: 131  GLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEE 15
            GL DG  RSLE+IG+LF+V+KEWIRKIEKAA+TKVR EE
Sbjct: 509  GLCDGRCRSLEEIGRLFNVTKEWIRKIEKAAMTKVRTEE 547


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  526 bits (1354), Expect = e-146
 Identities = 270/519 (52%), Positives = 360/519 (69%), Gaps = 6/519 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            +GKEAS +S + S  S+  E+ E+ YKD  K + C  GALQ+ E+ Y+A + MKM IG K
Sbjct: 33   QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIG-K 91

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
             +  D          P+ ED S  +    +  ++ F+LL+ENL  +EE FADS+ V LER
Sbjct: 92   CSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 151

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            +I++Q+GRLGALKLF  CLSRT+K   +  +    T+H ++   +  +   +D + V SG
Sbjct: 152  DIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSG 211

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVNL------VRQLTKSSNPKRRRFAVARNEME 852
            KK  RKS RER   K   I   PL SK++        V  + ++ N +R+R   A+NE E
Sbjct: 212  KKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAE 271

Query: 851  MAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSA 672
            M+KG+K + NLERIR+TLEE IG  ASL++WA AAG+ +KVLQQ+L FGW+CRD LL+S 
Sbjct: 272  MSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRST 331

Query: 671  HSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLI 492
            HSLVLYIARNYR  G++ ED+LQAGN+GVLQGAERFDHT+GYRFSTYVQYWIRKSMS+L+
Sbjct: 332  HSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLV 391

Query: 491  TQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRA 312
             +H++G+KIP TLN  I Q +KAR++LYKS+G +P D EIAK  G+S+A IR A  C R 
Sbjct: 392  ARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 451

Query: 311  MGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRF 132
            +GS DQ   DC      EFTPDT++K+PEE  M+Q  +K+I  LL+ L PRERQ+LVLR+
Sbjct: 452  VGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRY 511

Query: 131  GLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEE 15
            G  +  R+SLE+IG+ F+VSKEWIRK+EK AL  +R+EE
Sbjct: 512  GFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEE 550


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  526 bits (1354), Expect = e-146
 Identities = 270/519 (52%), Positives = 360/519 (69%), Gaps = 6/519 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            +GKEAS +S + S  S+  E+ E+ YKD  K + C  GALQ+ E+ Y+A + MKM IG K
Sbjct: 83   QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIG-K 141

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
             +  D          P+ ED S  +    +  ++ F+LL+ENL  +EE FADS+ V LER
Sbjct: 142  CSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            +I++Q+GRLGALKLF  CLSRT+K   +  +    T+H ++   +  +   +D + V SG
Sbjct: 202  DIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSG 261

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVNL------VRQLTKSSNPKRRRFAVARNEME 852
            KK  RKS RER   K   I   PL SK++        V  + ++ N +R+R   A+NE E
Sbjct: 262  KKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAE 321

Query: 851  MAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSA 672
            M+KG+K + NLERIR+TLEE IG  ASL++WA AAG+ +KVLQQ+L FGW+CRD LL+S 
Sbjct: 322  MSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRST 381

Query: 671  HSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLI 492
            HSLVLYIARNYR  G++ ED+LQAGN+GVLQGAERFDHT+GYRFSTYVQYWIRKSMS+L+
Sbjct: 382  HSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLV 441

Query: 491  TQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRA 312
             +H++G+KIP TLN  I Q +KAR++LYKS+G +P D EIAK  G+S+A IR A  C R 
Sbjct: 442  ARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRV 501

Query: 311  MGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRF 132
            +GS DQ   DC      EFTPDT++K+PEE  M+Q  +K+I  LL+ L PRERQ+LVLR+
Sbjct: 502  VGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRY 561

Query: 131  GLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEE 15
            G  +  R+SLE+IG+ F+VSKEWIRK+EK AL  +R+EE
Sbjct: 562  GFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEE 600


>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  498 bits (1281), Expect = e-138
 Identities = 257/522 (49%), Positives = 371/522 (71%), Gaps = 8/522 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            +G+E S+  +++S LS+I EE +  ++D LK        +Q++E+ ++  +  K+++G K
Sbjct: 77   KGREGSINISRLSFLSVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVG-K 135

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
             +    ++   D  + + ED+ V   SS+ D +++F+LL+ENL  +EE+FADSD + LER
Sbjct: 136  RSLSGLNDTIDDAQVFIKEDDFVP-PSSSKDRTSNFSLLLENLNILEESFADSDVLKLER 194

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFP--LTKHSKDSPISRPMKSRMDNITVF 1020
            +IL+Q+G+LGALKLF+ CL+RT++   A  + F    T++ ++          +  I V 
Sbjct: 195  DILLQLGKLGALKLFNTCLTRTLEVQTANVLDFSDLPTENIQECKRDGTSNGNVYKIIVC 254

Query: 1019 SGKKSRRKSMRERVAAKVA-KISDMPLHSKSVNLVRQLT-----KSSNPKRRRFAVARNE 858
            +GKK  RKS RER + K   K+   PL  KS+   R        K+SN K RR  +ARNE
Sbjct: 255  TGKKEERKSRRERASLKNGHKVPCFPLPLKSIQNGRGKATSFDKKTSNSKSRRLMIARNE 314

Query: 857  MEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLK 678
             EM++G+K L NLE+IR+TLE+  GR  SL+ WA AAG+  KVLQQ+LHFGW+CRD L++
Sbjct: 315  AEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVR 374

Query: 677  SAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSS 498
            S  SLVL++ARNYR  GI+LEDLLQAGNMGVLQGAERFD  RGYRFSTYVQYWIRKSMS 
Sbjct: 375  STRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQYWIRKSMSK 434

Query: 497  LITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCS 318
            ++++H++GI+IP TL+  I Q +KAR++L  S+G +P DE+IA+  G+S+A I  A++C 
Sbjct: 435  IVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCL 494

Query: 317  RAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVL 138
            R +GSIDQK+GDC + K+ EF  DTT+K+PEE VM+QH+ K++ +LL  L  RERQVL+L
Sbjct: 495  RVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLIL 554

Query: 137  RFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
            R+GL+D   +SLE+IG++FHVSKEW+R++EK  +T++RNEE+
Sbjct: 555  RYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEET 596


>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
          Length = 564

 Score =  498 bits (1281), Expect = e-138
 Identities = 257/522 (49%), Positives = 371/522 (71%), Gaps = 8/522 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            +G+E S+  +++S LS+I EE +  ++D LK        +Q++E+ ++  +  K+++G K
Sbjct: 35   KGREGSINISRLSFLSVISEEGDNLHRDHLKTNAYSSSGMQTLENEHSQVEEAKISVG-K 93

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
             +    ++   D  + + ED+ V   SS+ D +++F+LL+ENL  +EE+FADSD + LER
Sbjct: 94   RSLSGLNDTIDDAQVFIKEDDFVP-PSSSKDRTSNFSLLLENLNILEESFADSDVLKLER 152

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFP--LTKHSKDSPISRPMKSRMDNITVF 1020
            +IL+Q+G+LGALKLF+ CL+RT++   A  + F    T++ ++          +  I V 
Sbjct: 153  DILLQLGKLGALKLFNTCLTRTLEVQTANVLDFSDLPTENIQECKRDGTSNGNVYKIIVC 212

Query: 1019 SGKKSRRKSMRERVAAKVA-KISDMPLHSKSVNLVRQLT-----KSSNPKRRRFAVARNE 858
            +GKK  RKS RER + K   K+   PL  KS+   R        K+SN K RR  +ARNE
Sbjct: 213  TGKKEERKSRRERASLKNGHKVPCFPLPLKSIQNGRGKATSFDKKTSNSKSRRLMIARNE 272

Query: 857  MEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLK 678
             EM++G+K L NLE+IR+TLE+  GR  SL+ WA AAG+  KVLQQ+LHFGW+CRD L++
Sbjct: 273  AEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVR 332

Query: 677  SAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSS 498
            S  SLVL++ARNYR  GI+LEDLLQAGNMGVLQGAERFD  RGYRFSTYVQYWIRKSMS 
Sbjct: 333  STRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARGYRFSTYVQYWIRKSMSK 392

Query: 497  LITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCS 318
            ++++H++GI+IP TL+  I Q +KAR++L  S+G +P DE+IA+  G+S+A I  A++C 
Sbjct: 393  IVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIAEFTGLSLAKIESASRCL 452

Query: 317  RAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVL 138
            R +GSIDQK+GDC + K+ EF  DTT+K+PEE VM+QH+ K++ +LL  L  RERQVL+L
Sbjct: 453  RVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDMHDLLRGLDTRERQVLIL 512

Query: 137  RFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
            R+GL+D   +SLE+IG++FHVSKEW+R++EK  +T++RNEE+
Sbjct: 513  RYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEET 554


>ref|XP_006853783.2| PREDICTED: RNA polymerase sigma factor sigC [Amborella trichopoda]
          Length = 564

 Score =  494 bits (1272), Expect = e-137
 Identities = 262/527 (49%), Positives = 362/527 (68%), Gaps = 14/527 (2%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            + K+ S+ESAK STLS+IPEE+E    D  K +    G +Q+  SS+  T+ MKMNI + 
Sbjct: 43   KSKQPSIESAKASTLSVIPEETERLLGDCTKDFPYFFGDIQNANSSHDITEEMKMNINKN 102

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNST---HFNLLMENLKEIEETFADSDSVM 1203
            +          D ++ V++   + +   T  N     HF+ L ENL++IE    DS +  
Sbjct: 103  KP---------DASLYVIDKAELPIAEDTFSNVAGLPHFSFLFENLEKIEGIIVDSGNAR 153

Query: 1202 LEREILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITV 1023
            LEREIL+ I RLGALKLFHA LSRT+K P  + V     +H+    + +PM  + D   V
Sbjct: 154  LEREILLHIERLGALKLFHAFLSRTLKDPKILDVTGTCPEHA----MVQPMDEQADGYIV 209

Query: 1022 FSGKKSRRKSMRERVAAKVAKISDMPLHSKSVNLVRQLTKS-----------SNPKRRRF 876
             SGKK  RK+ RER    + K++D P+   S+  V++ TKS            N K R  
Sbjct: 210  SSGKKVERKAQRERA---LKKVTDEPIVCSSLKRVKKSTKSINAALTHKGHPGNSKSRSH 266

Query: 875  AVARNEMEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHC 696
              A++E+EM++G++ +  LE+IR+ LEE +GR AS + WA AAGI EKVL+Q+LHFGW C
Sbjct: 267  LRAQSEVEMSRGVQEVAKLEKIRANLEENLGRDASFSVWAEAAGINEKVLKQQLHFGWFC 326

Query: 695  RDNLLKSAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWI 516
            RD LL+S   LV+Y+A++YR RGI  EDLLQAG++GVLQGAERFDHTRGYRFSTYVQYWI
Sbjct: 327  RDKLLRSTRPLVMYLAKSYRGRGIGFEDLLQAGSLGVLQGAERFDHTRGYRFSTYVQYWI 386

Query: 515  RKSMSSLITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIR 336
            RKS+S+L+ +HS+G++IP+ LN ++ QT KA+R+L++ +G  PR+ EIA+  G+S+ ++R
Sbjct: 387  RKSLSALVARHSRGVQIPMALNKVLNQTVKAKRALHQMHGRHPREVEIAEFTGLSLVNVR 446

Query: 335  LANKCSRAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRE 156
            LANKC R  GSIDQ+IGD     + E T DT ++TPE++VMKQH+++ I E+L +LHPRE
Sbjct: 447  LANKCLRVHGSIDQRIGDNWGATYMEVTADTFIETPEKMVMKQHMREAIHEVLVNLHPRE 506

Query: 155  RQVLVLRFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEE 15
            +QVL+LR+GL DG  +SLE+IG+L++V+KEWIRKIEK AL KVR EE
Sbjct: 507  KQVLMLRYGLWDGRCKSLEEIGRLYNVTKEWIRKIEKMALEKVRKEE 553


>gb|ERN15250.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda]
          Length = 529

 Score =  494 bits (1272), Expect = e-137
 Identities = 262/527 (49%), Positives = 362/527 (68%), Gaps = 14/527 (2%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            + K+ S+ESAK STLS+IPEE+E    D  K +    G +Q+  SS+  T+ MKMNI + 
Sbjct: 8    KSKQPSIESAKASTLSVIPEETERLLGDCTKDFPYFFGDIQNANSSHDITEEMKMNINKN 67

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNST---HFNLLMENLKEIEETFADSDSVM 1203
            +          D ++ V++   + +   T  N     HF+ L ENL++IE    DS +  
Sbjct: 68   KP---------DASLYVIDKAELPIAEDTFSNVAGLPHFSFLFENLEKIEGIIVDSGNAR 118

Query: 1202 LEREILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITV 1023
            LEREIL+ I RLGALKLFHA LSRT+K P  + V     +H+    + +PM  + D   V
Sbjct: 119  LEREILLHIERLGALKLFHAFLSRTLKDPKILDVTGTCPEHA----MVQPMDEQADGYIV 174

Query: 1022 FSGKKSRRKSMRERVAAKVAKISDMPLHSKSVNLVRQLTKS-----------SNPKRRRF 876
             SGKK  RK+ RER    + K++D P+   S+  V++ TKS            N K R  
Sbjct: 175  SSGKKVERKAQRERA---LKKVTDEPIVCSSLKRVKKSTKSINAALTHKGHPGNSKSRSH 231

Query: 875  AVARNEMEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHC 696
              A++E+EM++G++ +  LE+IR+ LEE +GR AS + WA AAGI EKVL+Q+LHFGW C
Sbjct: 232  LRAQSEVEMSRGVQEVAKLEKIRANLEENLGRDASFSVWAEAAGINEKVLKQQLHFGWFC 291

Query: 695  RDNLLKSAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWI 516
            RD LL+S   LV+Y+A++YR RGI  EDLLQAG++GVLQGAERFDHTRGYRFSTYVQYWI
Sbjct: 292  RDKLLRSTRPLVMYLAKSYRGRGIGFEDLLQAGSLGVLQGAERFDHTRGYRFSTYVQYWI 351

Query: 515  RKSMSSLITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIR 336
            RKS+S+L+ +HS+G++IP+ LN ++ QT KA+R+L++ +G  PR+ EIA+  G+S+ ++R
Sbjct: 352  RKSLSALVARHSRGVQIPMALNKVLNQTVKAKRALHQMHGRHPREVEIAEFTGLSLVNVR 411

Query: 335  LANKCSRAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRE 156
            LANKC R  GSIDQ+IGD     + E T DT ++TPE++VMKQH+++ I E+L +LHPRE
Sbjct: 412  LANKCLRVHGSIDQRIGDNWGATYMEVTADTFIETPEKMVMKQHMREAIHEVLVNLHPRE 471

Query: 155  RQVLVLRFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEE 15
            +QVL+LR+GL DG  +SLE+IG+L++V+KEWIRKIEK AL KVR EE
Sbjct: 472  KQVLMLRYGLWDGRCKSLEEIGRLYNVTKEWIRKIEKMALEKVRKEE 518


>ref|XP_010909938.1| PREDICTED: RNA polymerase sigma factor sigC [Elaeis guineensis]
          Length = 563

 Score =  491 bits (1263), Expect = e-136
 Identities = 267/521 (51%), Positives = 350/521 (67%), Gaps = 8/521 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            R +E S E  K+S+  L  E  E  ++D+LK Y C   A QSIE+  A     K+NI +K
Sbjct: 40   RVREVSFELGKVSSQRLFTERVELLHRDTLKAYVCSFEAPQSIENMSA--DACKVNIDKK 97

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
              + +       +NM + ED+S +     + +S  ++LLMENL+ IE+ FA +D V L+R
Sbjct: 98   LLKENR-----PINM-IEEDSSSYNARLKASSSLQYSLLMENLERIEDVFAGTDLVRLQR 151

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            +IL+ I RLGALKLFHACLSRT+ AP A       +KHS    +  P+  +  NI V SG
Sbjct: 152  DILVHIRRLGALKLFHACLSRTLMAPTADNSNSLHSKHSGGCSLEFPLGEQKHNIIVHSG 211

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVNL--------VRQLTKSSNPKRRRFAVARNE 858
            KK  RK  R R A + A        S   N         + +L  SS  ++RR  +ARNE
Sbjct: 212  KKKERKLRRRRRALERASEMSALSDSSKKNCKMFSLPTGLGKLNNSSESRKRRVLIARNE 271

Query: 857  MEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLK 678
             EM++G+K + NLER R  LEE IG+ AS   WA AAGI +K L QRL FGW+CRD L+K
Sbjct: 272  SEMSRGVKEVANLERTRIKLEEEIGQPASYARWAEAAGIDQKTLYQRLQFGWYCRDKLIK 331

Query: 677  SAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSS 498
            S  SLV+++AR YR  GI+ +DLLQAGN+GVL GAERFD+ RGY+FSTYVQYWIRKSM +
Sbjct: 332  STRSLVMFVARKYRGMGIAFDDLLQAGNVGVLNGAERFDNKRGYKFSTYVQYWIRKSMLA 391

Query: 497  LITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCS 318
            +I +HSKGI+IPV +  +I++ ++ARR L    G +PRDEE A+  G+S+  +RLANKCS
Sbjct: 392  VIARHSKGIQIPVRMEKVIKRIQEARRDLSNREGRYPRDEETAEFTGLSLDKVRLANKCS 451

Query: 317  RAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVL 138
            R +GSI+Q IGD    K  E TPDT+LK P EIVM QH++++I E+L+ LHPRERQVLVL
Sbjct: 452  RTVGSIEQGIGDGWCTKIMEITPDTSLKAPSEIVMGQHMREDIFEVLKPLHPRERQVLVL 511

Query: 137  RFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEE 15
            R+GL+DG  +SLEDIG+LFHV+KEWIRKIEKAA +K+R EE
Sbjct: 512  RYGLDDGRCKSLEDIGRLFHVTKEWIRKIEKAAFSKIRREE 552


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  489 bits (1260), Expect = e-135
 Identities = 258/524 (49%), Positives = 369/524 (70%), Gaps = 10/524 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RG+EA+   +++S LS+I EE +  ++D LK Y     A+Q++E+ ++  +G K+N G++
Sbjct: 34   RGREATSYQSRLSFLSVISEEGDIAHRDPLKTYAY-SYAVQTVENEHSQGEGFKVNFGKR 92

Query: 1373 EARVDSH---NAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVM 1203
                 SH   N   D  + + ED  V   SST + ++ F+LL+ENL  +E++FADSD+  
Sbjct: 93   -----SHFGLNIIGDAEVSLKEDIFVS-PSSTKERTSRFSLLLENLNILEQSFADSDASK 146

Query: 1202 LEREILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITV 1023
            LE +IL+Q+G+LGALKLF+ CL+RT++  + ++V+   T+   +  I+    +    + V
Sbjct: 147  LEEDILLQLGKLGALKLFNTCLTRTLETTNVLEVSDVHTEIIGECNINGTSINNQIKVVV 206

Query: 1022 FSGKKSRRKSMRERVAAKVA-KISDMPLHSKSVN------LVRQLTKSSNPKRRRFAVAR 864
             + KK  RKS RER +A+   K   +PL S+ +        V    K+S  K RR  +AR
Sbjct: 207  HTAKKEERKSRRERASARKGHKSPSLPLPSRPIQSGSEKPTVSSGKKASKSKSRRLIIAR 266

Query: 863  NEMEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNL 684
            NE EMA+G+K L +LE+IR+TLEE   R  SL+ WA AAG+  KVLQQ+L FGW+CRD L
Sbjct: 267  NEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDEL 326

Query: 683  LKSAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSM 504
            +KS  SLVLY ARNYR  GI+LEDLLQAGN+GVL+GAERFDHTRGYRFSTYVQYWIRKSM
Sbjct: 327  IKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSM 386

Query: 503  SSLITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANK 324
            S ++++ ++GI+IP TL+  I Q +KAR++L  SNG +P D+EIAK  G+S+A I  A++
Sbjct: 387  SKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASR 446

Query: 323  CSRAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVL 144
            C R +GSIDQKIG+ ++ K+ EF PDT++++PEE+VM+QH+ +++  LL  L  RERQVL
Sbjct: 447  CLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVL 506

Query: 143  VLRFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
            +LRFGL D   +SLE+IG+ FHVSKEW+R++EK  +T++RNEE+
Sbjct: 507  ILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVMTRLRNEET 550


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  487 bits (1253), Expect = e-134
 Identities = 260/507 (51%), Positives = 356/507 (70%), Gaps = 8/507 (1%)
 Frame = -3

Query: 1508 SLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEKEARVDSHN-AFCDLN 1332
            S +P       KD LK Y     A Q++E      + MK+NIG K ++  SH+    D  
Sbjct: 335  SRLPSSGVLSLKDPLKAYAS-SAAPQTLEKGCLEIEEMKVNIG-KGSQAHSHSLTMIDKT 392

Query: 1331 MPVLE-DNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLEREILIQIGRLGALK 1155
              ++  D S    S  +  ++H++LLMENL  +EETFADSD + LEREIL+Q+GR GALK
Sbjct: 393  HELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALK 452

Query: 1154 LFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSGKKSRRKSMRERVA 975
            LF+ CLSRT+KA + + ++  +  +S D  ++  +  + DNI V S KK +RK +RER  
Sbjct: 453  LFNTCLSRTLKASNILDLS-DVPANSGDCNMNLSVDGQKDNIVVCSRKKKQRKKIRERAL 511

Query: 974  AKVAKISDMPLHSKSVNLVRQLTKSSNPKR------RRFAVARNEMEMAKGLKGLTNLER 813
                 IS   + S +++   Q  K S+ KR      RR  +ARNE EM+KG+K + NLER
Sbjct: 512  ENPTIISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLER 571

Query: 812  IRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSAHSLVLYIARNYRR 633
            IR+TLEE  GR ASL+ WA AAG+ EKVLQQ L FGW+CRD LL+S  SLVLY ARNYR 
Sbjct: 572  IRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRG 631

Query: 632  RGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLITQHSKGIKIPVTL 453
             GI+ EDL+QAG++GVLQGAERFDHTRGYRFSTYVQ+WIRKS+S ++ +H++GI++P TL
Sbjct: 632  LGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTL 691

Query: 452  NDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRAMGSIDQKIGDCMH 273
            +  I Q +KAR++L KS+G +P ++ IAK  G+S+A IR ANKC R +GSIDQKIGDCM+
Sbjct: 692  SRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMN 751

Query: 272  VKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRFGLEDGSRRSLEDI 93
             K+ EF PD ++++PE+ VM+QH++++I +LL  L  RERQV+VLR+GL+    +SLE+I
Sbjct: 752  AKYLEFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEI 811

Query: 92   GKLFHVSKEWIRKIEKAALTKVRNEES 12
            G+LFHVSKEWIR+IE  A+ K+R++E+
Sbjct: 812  GRLFHVSKEWIRRIEMKAMKKLRDKET 838


>ref|XP_008799751.1| PREDICTED: RNA polymerase sigma factor sigC [Phoenix dactylifera]
          Length = 567

 Score =  483 bits (1244), Expect = e-133
 Identities = 262/524 (50%), Positives = 349/524 (66%), Gaps = 11/524 (2%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            R +EA  E  K+S   L  E  E  ++D+ K   C   A QSIE+  A    + M   ++
Sbjct: 41   RVREAFSEPGKVSLQHLFTERVELLHRDTSKACVCSFEAPQSIENMSADANEVNM---DR 97

Query: 1373 EARVDSHNAFCDLNMPVL---EDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVM 1203
            +    +H    DLN P+     D+S +    T+ +S  +NLLMENL  IE+ FA +D V 
Sbjct: 98   KLLRGAH----DLNRPINMMENDSSAYHARLTASSSLQYNLLMENLDRIEDVFAGTDLVR 153

Query: 1202 LEREILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITV 1023
            ++R+IL+ I RLGALKLFHACLSRT   P A    F  ++HS    +  P+  +  NI V
Sbjct: 154  MQRDILVHIRRLGALKLFHACLSRTHITPTADNSNFLHSEHSGGCSLEFPLVEQKHNIIV 213

Query: 1022 FSGKKSRRKSMRERVAAKVAKISDMPLHSKSVNLVR--------QLTKSSNPKRRRFAVA 867
             SGKK  RK  R R   + +++S + L S   N           +L  SS  ++RR  +A
Sbjct: 214  RSGKKKERKLRRRRALERASEVSAL-LGSSKKNCTTFSLPTGLGKLNNSSESRKRRVLIA 272

Query: 866  RNEMEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDN 687
            RNE EM++G+K + NLER    LEE+IG+ AS   WA AAGI +K L QRL FGW+CRD 
Sbjct: 273  RNESEMSRGVKEVANLERTYIKLEEKIGQPASYARWAEAAGIDQKTLHQRLQFGWYCRDE 332

Query: 686  LLKSAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKS 507
            L+KS  SLV+Y+AR YR  GI+ +DLLQAGN+GVL GAERFD+ RGY+FSTYVQYWIRKS
Sbjct: 333  LIKSTRSLVIYLARKYRGMGIAFDDLLQAGNLGVLNGAERFDNKRGYKFSTYVQYWIRKS 392

Query: 506  MSSLITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLAN 327
            M ++I +HSKGI+IPV +  II+Q ++ARR      G +PRDEE A+  G+S+  +RLA 
Sbjct: 393  MLAVIARHSKGIQIPVRMEKIIKQIQEARRDFSSREGRYPRDEETAEFTGLSLDKVRLAR 452

Query: 326  KCSRAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQV 147
            KCSR +GSI+Q+IGD    KF E TPDT+LK P EIV++QH++++I E+L+ LHPRE QV
Sbjct: 453  KCSRTIGSIEQEIGDGWCTKFMEITPDTSLKAPSEIVVRQHMREDIFEVLKGLHPREMQV 512

Query: 146  LVLRFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEE 15
            LVLR+GL+DG  +SLE+IG+LFHV+KEWIRK+EKAAL+K+R EE
Sbjct: 513  LVLRYGLDDGRCKSLEEIGRLFHVTKEWIRKLEKAALSKIRREE 556


>gb|KDO79960.1| hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 534

 Score =  474 bits (1221), Expect = e-131
 Identities = 247/520 (47%), Positives = 353/520 (67%), Gaps = 6/520 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RG+E S  SA++S LS I E+S + ++D +K YTC     Q++E+ Y+ T+ ++      
Sbjct: 33   RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIRQK---- 88

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
                                 S   +   + + + F LLMENL  +E TFADSD++ LER
Sbjct: 89   ---------------------STSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            EIL Q+G+LGALKLF++ LSR VK  + + ++     H+++  ++      M  I V S 
Sbjct: 128  EILQQLGKLGALKLFNSHLSRIVKTSNVLDLS---DVHTEEQKMNDSRDYHMGKILVPSK 184

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVN------LVRQLTKSSNPKRRRFAVARNEME 852
            +K +RK    RV+ +  + S + L S+++        +    ++ N + RR  +ARNE E
Sbjct: 185  RKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSAERALNSRGRRLTIARNEAE 244

Query: 851  MAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSA 672
            M+KG++ + NLERI++TLE+  G+ ASL  WA+AAG+ E+VL+Q L FGW+CR+ L+KS 
Sbjct: 245  MSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIKST 304

Query: 671  HSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLI 492
              LVL++ARNYR  GI   DLLQAGN+GVLQGAERFDHTRGY+FSTYVQYWIRKS+S ++
Sbjct: 305  RPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMV 364

Query: 491  TQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRA 312
             +H++GIKIP  LN  I + +KAR++L  S+G +P D EIAK  G+S+A IR A++C R 
Sbjct: 365  ARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRI 424

Query: 311  MGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRF 132
            +GSIDQKIGDC++ K+ EF PD ++K+P+EIVM+QH++K++  +LE L  RERQVLVLR+
Sbjct: 425  VGSIDQKIGDCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRY 484

Query: 131  GLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
            GL D   +SLE+IGKLFHVSKEWIRK+EK A+TK+R+ E+
Sbjct: 485  GLNDHRPKSLEEIGKLFHVSKEWIRKLEKKAMTKLRDSET 524


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
            gi|462419859|gb|EMJ24122.1| hypothetical protein
            PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  474 bits (1221), Expect = e-131
 Identities = 252/518 (48%), Positives = 350/518 (67%), Gaps = 4/518 (0%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RG+E S  SA++S LS+I EE E   KD LK YT P  + Q +E   +  + +K      
Sbjct: 34   RGREGSFNSARLSFLSVISEEGEASSKDPLKVYTFPSASPQILEDGVSELEEVKTAF--- 90

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
              RV    +F D  MPV E   +      +  ++HF+LL++NL  +EETFA SD + LE+
Sbjct: 91   -RRVPK--SFSDNQMPVAEGKFISSKGLEACTASHFSLLLQNLNVLEETFATSDVLKLEK 147

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            EIL+Q+ RLGALKLF  CLSRT+K    + ++   T   ++  + R   + +  I V SG
Sbjct: 148  EILLQLARLGALKLFDICLSRTLKTSSFLDLSDIPTVPVEEGKMERKEDNNVGEIIVRSG 207

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVNLVRQLTKS----SNPKRRRFAVARNEMEMA 846
            KK  R+S +      +   + +P  +    L +    S    SN + RR  +++NE EM+
Sbjct: 208  KKEERRSRKRTSDNAIVSSNSLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMS 267

Query: 845  KGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSAHS 666
             G+K + +LERI+ TLE+  G+ A+L  WA AAG+ EKVL Q L FGW+C+D L++S  S
Sbjct: 268  IGVKVIADLERIKETLEKETGKVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRS 327

Query: 665  LVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLITQ 486
            LVLY+ARNYR  G++L+DL+QAGN+G+LQGAERFDH+RGYRFSTYVQYWIRKSMS L+ Q
Sbjct: 328  LVLYLARNYRGLGVALDDLMQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQ 387

Query: 485  HSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRAMG 306
            H++G++IP TL+  I Q +KAR++ Y S+  +P DEEIAK+ G+S+A IR A+ C R +G
Sbjct: 388  HARGVQIPFTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVG 447

Query: 305  SIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRFGL 126
            S+D K+ +     + EFTPDT+LK+PEE VM+QH++K+I +LL+ L+ RERQVLVLR+GL
Sbjct: 448  SVDHKMWESSDGTYMEFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGL 507

Query: 125  EDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
             +   +SLE+IG+LFHVSKEWIRKIEK AL K+R EES
Sbjct: 508  NNYDPKSLEEIGRLFHVSKEWIRKIEKKALMKLRVEES 545


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
            gi|557553989|gb|ESR64003.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score =  474 bits (1219), Expect = e-130
 Identities = 249/520 (47%), Positives = 356/520 (68%), Gaps = 6/520 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RG+E S  SA++S LS I E+S + ++D +K YTC     Q++E+ Y+ T+ ++      
Sbjct: 33   RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIRQK---- 88

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
                                 S   +   + + + F LLMENL  +E TFADSD++ LER
Sbjct: 89   ---------------------STSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            EIL Q+G+LGALKLF++ LSR VK  + + ++     H+++  ++      M  I V S 
Sbjct: 128  EILQQLGKLGALKLFNSHLSRIVKTSNVLDLS---DVHTEEQKMNDSRDYHMGKILVPSK 184

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVNL-VRQLT-----KSSNPKRRRFAVARNEME 852
            +K +RK    RV+ +  + S + L S+++   ++Q T     ++ N + RR  +ARNE E
Sbjct: 185  RKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAE 244

Query: 851  MAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSA 672
            M+KG++ + NLERI++TLE+  G+ ASL  WA+AAG+ E+VL+Q L FGW+CR+ L+KS 
Sbjct: 245  MSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIKST 304

Query: 671  HSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLI 492
              LVL++ARNYR  GI   DLLQAGN+GVLQGAERFDHTRGY+FSTYVQYWIRKS+S ++
Sbjct: 305  RPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMV 364

Query: 491  TQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRA 312
             +H++GIKIP  LN  I + +KAR++L  S+G +P D EIAK  G+S+A IR A++C R 
Sbjct: 365  ARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRI 424

Query: 311  MGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRF 132
            +GSIDQKIGDC++ K+ EF PD ++K+P+EIVM+QH++K++  +LE L  RERQVLVLR+
Sbjct: 425  VGSIDQKIGDCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRY 484

Query: 131  GLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
            GL D   +SLE+IGKLFHVSKEWIRK+EK A+TK+R+ E+
Sbjct: 485  GLNDHRPKSLEEIGKLFHVSKEWIRKLEKKAMTKLRDSET 524


>ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC [Eucalyptus grandis]
            gi|629114510|gb|KCW79185.1| hypothetical protein
            EUGRSUZ_C00620 [Eucalyptus grandis]
          Length = 556

 Score =  473 bits (1217), Expect = e-130
 Identities = 253/523 (48%), Positives = 352/523 (67%), Gaps = 10/523 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RGKEAS  S ++S+LS I EE E  +K   +   C   +  ++E   +     ++ IG++
Sbjct: 33   RGKEASFSSGRLSSLSSIAEEVEPCHKYHSRSCKCSSASAPALEDGLSEMTNTEVTIGKR 92

Query: 1373 E-ARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLE 1197
                ++S      +++     NS    +  S  + HF+LLM+NL  +EET ADS+++ LE
Sbjct: 93   PFGSINSDPG--GIHISHKARNSKGNTTPKSVKAAHFSLLMDNLNALEETLADSNALNLE 150

Query: 1196 REILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNIT--- 1026
            R+IL+Q+GRLGALKLFH CLS+   APDA +V+        D+ + +   S  DN     
Sbjct: 151  RDILLQLGRLGALKLFHTCLSKAFDAPDACEVS--------DAVVEKKTSSERDNHVKRI 202

Query: 1025 VFSGKKSRRKSMRERVAAKVAKISDMPLHSKSVNL------VRQLTKSSNPKRRRFAVAR 864
            + SGK   RKS RER +AK  +     L S +         V  L ++SN KRRR  +AR
Sbjct: 203  IRSGKSEMRKSRRERNSAKPNQNPPFSLLSTANQKWLQQPSVSSLRRASNSKRRRSIIAR 262

Query: 863  NEMEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNL 684
            NE EM++G+K +  LE++R+ LEE  G+  SL +WA AAG+ E VL+Q LHFGW CRD L
Sbjct: 263  NEAEMSRGVKVVAELEKLRAILEEESGQVPSLRTWAEAAGVDENVLRQNLHFGWFCRDEL 322

Query: 683  LKSAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSM 504
            L+S  SLV+++ RNYR  GI+ EDL+QAGNMGVL+GAERFDHTRGYRFSTYVQYWIRKSM
Sbjct: 323  LRSTRSLVIFLTRNYRGLGIAHEDLIQAGNMGVLRGAERFDHTRGYRFSTYVQYWIRKSM 382

Query: 503  SSLITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANK 324
            S ++  H++GI+IP TL   + Q +KA++SL      +P D EIAKL G SVA +R A++
Sbjct: 383  SRMVAWHARGIRIPTTLATAVNQIQKAQKSLNNHRRKYPDDMEIAKLTGFSVAKVRSASQ 442

Query: 323  CSRAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVL 144
            C R +GSIDQKIGDC++ K+ EFTPD +L++PEE V++Q++  +IQELL  L  RERQVL
Sbjct: 443  CLRVVGSIDQKIGDCINAKYMEFTPDRSLRSPEETVLRQNMSSQIQELLSGLDFRERQVL 502

Query: 143  VLRFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEE 15
            +LR+GL+D   +SLE+IG+LF+VSKEWIR+IE+ A+ K+R+++
Sbjct: 503  ILRYGLKDNQVKSLEEIGRLFNVSKEWIRRIERKAMEKLRDKD 545


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score =  469 bits (1208), Expect = e-129
 Identities = 245/520 (47%), Positives = 350/520 (67%), Gaps = 6/520 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RG+E S  SA++S LS I E+S + ++D +K YTC     Q++E+ Y+ T+ ++      
Sbjct: 33   RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIRQK---- 88

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
                                 S   +   + + + F LLMENL  +E TFADSD++ LER
Sbjct: 89   ---------------------STSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            EIL Q+G+LGALKLF++ LSR VK  + + ++     H+++  +       M  I V S 
Sbjct: 128  EILQQLGKLGALKLFNSHLSRIVKTSNVLDLS---DVHTEEQKMDDSRDYHMGKILVPSK 184

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVN------LVRQLTKSSNPKRRRFAVARNEME 852
            +K +RK    RV+ +  +   + L S+++        +    ++ N + RR  +ARNE E
Sbjct: 185  RKGKRKLKTARVSEESIETYLLSLPSEALQEGLKQPTIFSAERALNSRGRRLMIARNEAE 244

Query: 851  MAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSA 672
            M+KG++ + NLERI++TLE+  G+ A L  WA+AAG+ E+VL+Q L FGW+CR+ L+KS 
Sbjct: 245  MSKGVQVVANLERIKTTLEKESGKAARLNCWAQAAGVSERVLKQHLAFGWYCREELIKST 304

Query: 671  HSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLI 492
              LVL++ARNYR  GI   DLLQAGN+GVLQGAERFDHTRGY+FSTYVQYWIRKS+S ++
Sbjct: 305  RPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMV 364

Query: 491  TQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRA 312
             +H++GIKIP  LN  I + +KAR++L  S+G +P D EIAK  G+S+A IR A++C R 
Sbjct: 365  ARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRI 424

Query: 311  MGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRF 132
            +GSIDQKIGDC++ K+ EF PD ++K+P+EIVM+QH++K++  +LE L  RERQVLVLR+
Sbjct: 425  VGSIDQKIGDCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRY 484

Query: 131  GLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
            GL D   +SLE+IGKLFHVSKEWIRK+EK A+TK+R+ E+
Sbjct: 485  GLNDHRPKSLEEIGKLFHVSKEWIRKLEKKAMTKLRDSET 524


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC [Fragaria vesca subsp.
            vesca]
          Length = 545

 Score =  469 bits (1206), Expect = e-129
 Identities = 254/523 (48%), Positives = 352/523 (67%), Gaps = 9/523 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RG+E S  SA +S LS+I EE ET  KD LK YTCP  + Q ++            + E 
Sbjct: 34   RGREGSFSSAGLSFLSVISEECETSSKDPLKVYTCPSASPQLLDDG----------LSEM 83

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
            E +++        +  +++D     +SS    ++H+ LL++NL  +EETFADS    LE+
Sbjct: 84   EEKMNPRRMSKSGSANMIDDKEYSFMSSAGLRTSHYTLLLQNLNVLEETFADSGVSKLEK 143

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAF----PLTKHSKDSPISRPMKSRMDNIT 1026
            EIL+Q+GRLGALKLF  CLSRT+K    + ++     P+ KH          K+   NI 
Sbjct: 144  EILLQLGRLGALKLFEICLSRTLKTSSFLDLSDIPTEPIEKH----------KTERKNI- 192

Query: 1025 VFSGKKSRRKSMRERVAAKVAKISD-MPLHSKSVNLVR----QLTKSSNPKRRRFAVARN 861
            V SGKK  +KS R+R +    K S  +P+        +     + ++SN + RR  +A+N
Sbjct: 193  VRSGKKEEQKS-RKRTSYDSKKFSGTLPVKQMREGFKKPNPSSVRRASNSRSRRLMMAKN 251

Query: 860  EMEMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLL 681
            E EM+ G+K + +LER++ TLE+  G+  +L  WA AAG+ EKVLQQ+LHFGW+C+D L+
Sbjct: 252  EAEMSVGVKVIADLERLKVTLEKETGKVPTLRCWAEAAGVDEKVLQQQLHFGWYCQDELV 311

Query: 680  KSAHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMS 501
            +S  SLVLY+ARNYR  G++L+DLLQAGN+G+LQGAERFD +RGYRFSTYVQYWIRKSMS
Sbjct: 312  RSTRSLVLYLARNYRGLGVALDDLLQAGNLGLLQGAERFDPSRGYRFSTYVQYWIRKSMS 371

Query: 500  SLITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKC 321
             L+ QH++GIKIP TL+  I + +KAR++ Y S+  +P DEEIAK+ G+S+A I  A++C
Sbjct: 372  RLVAQHARGIKIPNTLSKAINRIQKARKANYNSHMKYPDDEEIAKITGLSLAKISSASRC 431

Query: 320  SRAMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLV 141
             R +GS+D KI +C    + EFTPD  ++TPEE VM+QH++ +I  LLE L+ RE++VL 
Sbjct: 432  LRVVGSVDHKIWECSAGTYMEFTPDIAVETPEESVMRQHMKNDIHVLLEGLNSREKKVLA 491

Query: 140  LRFGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
            LR+GL   + +SLE+IG+LFHVSKEWIRKIEK ALTK+RNEES
Sbjct: 492  LRYGLNYCNPKSLEEIGRLFHVSKEWIRKIEKNALTKLRNEES 534


>ref|XP_008220144.1| PREDICTED: RNA polymerase sigma factor sigC-like [Prunus mume]
          Length = 553

 Score =  468 bits (1203), Expect = e-129
 Identities = 247/518 (47%), Positives = 346/518 (66%), Gaps = 4/518 (0%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RG+E S  SA++S LS+I EE E   KD LK YTCP  + Q +E   +          E+
Sbjct: 34   RGREGSFNSARLSFLSVISEEGEASSKDPLKVYTCPSASPQILEDGVSEM--------EE 85

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
             A      +  D  MPV E   +      +  ++HF+LL++NL  +EETFA S+ + LE+
Sbjct: 86   AAFRRVPKSISDNRMPVAEGKFISSKGLEACTASHFSLLLQNLNVLEETFATSNVLKLEK 145

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            EIL+Q+ RLGALKLF  CLSRT+K    + ++   T   ++  + R   + +  I V SG
Sbjct: 146  EILLQLARLGALKLFDICLSRTLKTSSFLDLSDIPTVPVEEGKMERKEDNNVFEIIVRSG 205

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVNLVRQLTKS----SNPKRRRFAVARNEMEMA 846
            KK  R+S +      +   + +P  +    L      S    SN + RR  +++NE EM+
Sbjct: 206  KKEERRSRKRTSDNAIVSSNSLPPKTIWKGLKNPTLSSGKRASNYRSRRLTISKNEAEMS 265

Query: 845  KGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSAHS 666
             G+K + +LERI+ TLE+  G+  +L  WA AAG+ E+VL Q L FGW+C+D L++S  S
Sbjct: 266  IGVKVIADLERIKETLEKETGKVVTLRCWAEAAGVHERVLLQHLRFGWYCQDELMRSTRS 325

Query: 665  LVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLITQ 486
            LVLY+ARNYR  G++L+DL+QAGN+G+LQGAERFDH+RGYRFSTYVQYWIRKSMS L+ Q
Sbjct: 326  LVLYLARNYRGLGVALDDLIQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQ 385

Query: 485  HSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRAMG 306
            H++G++IP TL+  I Q +KAR++ Y S+  +P DEEIAK+ G+S+A IR A+ C R +G
Sbjct: 386  HARGVQIPFTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVG 445

Query: 305  SIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRFGL 126
            S+D K+ +     + EFTPDT+LK+PEE VM+QH++K+I +LL+ L+ RERQVLVLR+GL
Sbjct: 446  SVDHKMWESSDGTYMEFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGL 505

Query: 125  EDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
             +   +SLE+IG+LFHVSKEWIRKIEK AL K++ EES
Sbjct: 506  NNYDPKSLEEIGRLFHVSKEWIRKIEKKALMKLKVEES 543


>ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
            [Gossypium raimondii] gi|763798660|gb|KJB65615.1|
            hypothetical protein B456_010G103500 [Gossypium
            raimondii]
          Length = 565

 Score =  463 bits (1192), Expect = e-127
 Identities = 252/521 (48%), Positives = 357/521 (68%), Gaps = 7/521 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGE- 1377
            RGKEAS  S ++S LS+I +E     KD  K Y  P  ALQ++E+   + +  K+NI + 
Sbjct: 41   RGKEASFNSTRLSFLSVISDEGVFLSKDPPKAYASP-AALQTLENG-CSDKEEKVNIDKG 98

Query: 1376 KEARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLE 1197
             ++R  SH      + P+  + S    S  +  ++ +N+L +NL  +EETF DSD + LE
Sbjct: 99   PQSRNCSHVMVGKSHEPIRGNRSSSCASPQTCKASRYNVLKDNLNVLEETFVDSDVLRLE 158

Query: 1196 REILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFS 1017
            REIL+Q+GRLGAL LF+  LS     P  I     +  +S +  ++  + S  D I V S
Sbjct: 159  REILLQLGRLGALNLFNIFLSHK---PSNIFDLSDVAANSVECNMNGLVDSEKDKIIVSS 215

Query: 1016 GKKSRRKSMRERVAAKVAKISDMPLHSKSVNLVRQLTKSSNPKR------RRFAVARNEM 855
             K  +R+  RE+ A +   IS   L + +++   Q  K S+PKR      RR AVARNE+
Sbjct: 216  RKNKQRRKRREK-AVETTIISTQLLPTNTLHGRYQKPKRSSPKRMSDSRKRRLAVARNEV 274

Query: 854  EMAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKS 675
            EM+KG+K + NLERIR+TLEE  GR  SL+ WA AA + EK LQQ LH+GW+CRD L+++
Sbjct: 275  EMSKGVKVVANLERIRTTLEEETGRMVSLSCWAEAAKLTEKALQQHLHYGWYCRDELIRT 334

Query: 674  AHSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSL 495
              SLVLY ARNYR  GI+ EDL+QAG++GVLQGAERFDHTRGY+FSTY+ YWIRKS+S +
Sbjct: 335  TRSLVLYFARNYRGLGIAHEDLIQAGSIGVLQGAERFDHTRGYKFSTYIHYWIRKSISRM 394

Query: 494  ITQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSR 315
            + +H++GI++P TL+  I Q +KAR++L KS+G +P ++EIAK+ G+S++ IR ANKC R
Sbjct: 395  VARHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFR 454

Query: 314  AMGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLR 135
             +GSIDQKIGDC++ K+ EF PD ++ +PE+ VM+QH++++I +LL  L  RERQV+VLR
Sbjct: 455  VVGSIDQKIGDCINAKYLEFIPDASICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLR 514

Query: 134  FGLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEES 12
            +GL     +SLE+IG+LF VSKEWIR+IE  A+ K+R++E+
Sbjct: 515  YGLTGSPPKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDKET 555


>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
          Length = 540

 Score =  460 bits (1184), Expect = e-126
 Identities = 251/521 (48%), Positives = 344/521 (66%), Gaps = 6/521 (1%)
 Frame = -3

Query: 1553 RGKEASLESAKMSTLSLIPEESETRYKDSLKQYTCPDGALQSIESSYAATQGMKMNIGEK 1374
            RG+EAS+ SA++S LS+I EE ET  +  +K Y C   A Q +E         K N+   
Sbjct: 31   RGREASINSARLSFLSIISEEGETLRRVLVKAYACSFAARQMLE---------KENL--- 78

Query: 1373 EARVDSHNAFCDLNMPVLEDNSVHLVSSTSDNSTHFNLLMENLKEIEETFADSDSVMLER 1194
             + +D +        P  E  S   +S  +  ++HF LL++NL  +E+TFADS  + LE 
Sbjct: 79   HSMIDDN--------PTEEGKSTSQMSVEARKASHFRLLVQNLDVLEKTFADSSVLRLES 130

Query: 1193 EILIQIGRLGALKLFHACLSRTVKAPDAIKVAFPLTKHSKDSPISRPMKSRMDNITVFSG 1014
            +IL+Q+ RLGA  LF  CLS+T++  D+  ++    +H ++      M  ++  I V S 
Sbjct: 131  DILLQLERLGARNLFDTCLSKTLE--DSNDLSNVPIEHMEEQKTVIAMDDQIGKIFVCSR 188

Query: 1013 KKSRRKSMRERVAAKVAKISDMPLHSKSVNLVRQLTKSSNPKR------RRFAVARNEME 852
            KK  RKS R R +   +KIS MPL SK+     Q    S+ KR      RR  +ARNE E
Sbjct: 189  KKEERKSKRARASENASKISSMPLRSKTARKGYQQPAHSSSKRGSNSRGRRLMIARNEAE 248

Query: 851  MAKGLKGLTNLERIRSTLEERIGRGASLTSWARAAGIGEKVLQQRLHFGWHCRDNLLKSA 672
            M++G+K + +LERIR+TLE+  GR  SL++WA AAGI EKVL Q L +GW+CRD LL+S 
Sbjct: 249  MSRGVKVIQDLERIRTTLEKETGRVVSLSTWAEAAGIDEKVLNQDLRYGWYCRDELLRST 308

Query: 671  HSLVLYIARNYRRRGISLEDLLQAGNMGVLQGAERFDHTRGYRFSTYVQYWIRKSMSSLI 492
             SLVLY+ARNYR  GI+ EDLLQAG +GVLQGAERFDHTRGY+ STYVQYWIRKSMS ++
Sbjct: 309  RSLVLYLARNYRGLGIASEDLLQAGKLGVLQGAERFDHTRGYKLSTYVQYWIRKSMSRMV 368

Query: 491  TQHSKGIKIPVTLNDIIEQTKKARRSLYKSNGTFPRDEEIAKLAGISVASIRLANKCSRA 312
             QH++G++IP TL+ +I + +KAR++L  S+G +P D EIAK  GIS+  IR A KC R 
Sbjct: 369  AQHARGVQIPYTLSRVINRVQKARKALSNSHGKYPDDAEIAKATGISLEKIRSAKKCLRV 428

Query: 311  MGSIDQKIGDCMHVKFKEFTPDTTLKTPEEIVMKQHVQKEIQELLEHLHPRERQVLVLRF 132
            +GSIDQK+  C  VK+ E TPD ++  PEE V++QH+ K++   L+ L  RE QVL+LR+
Sbjct: 429  VGSIDQKMEGCFGVKYMELTPDISIPCPEETVIRQHMIKDLYNHLQGLDQREMQVLILRY 488

Query: 131  GLEDGSRRSLEDIGKLFHVSKEWIRKIEKAALTKVRNEESK 9
            GL +   +SLE+IG+LF VSKEWIR++EK ALT +R EE++
Sbjct: 489  GLNNHHPKSLEEIGRLFCVSKEWIRRVEKKALTNLRKEETR 529