BLASTX nr result

ID: Cinnamomum25_contig00015054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00015054
         (368 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010029519.1| PREDICTED: RING-H2 finger protein ATL3-like ...    60   4e-07
emb|CBI35789.3| unnamed protein product [Vitis vinifera]               59   2e-06
ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like...    59   2e-06
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]    59   2e-06

>ref|XP_010029519.1| PREDICTED: RING-H2 finger protein ATL3-like [Eucalyptus grandis]
           gi|629090185|gb|KCW56438.1| hypothetical protein
           EUGRSUZ_I02165 [Eucalyptus grandis]
          Length = 308

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
 Frame = -2

Query: 283 MDDPNSRNELKDSIAIKIGGQVMFAAIILLFLTVVFAVFIHI-----------TXXXXXX 137
           M D      L +S A++I G++M  AII+LFL VVF +F+H+                  
Sbjct: 1   MSDSQGSGTLDNSAAVEITGKIMVIAIIVLFLVVVFVLFLHLYAKWFWWRTEEPHPQGLN 60

Query: 136 XXXXXXXXXXXXSDNNNVLDQQRGLEPSIIQSLPVVIYRPNEFKD 2
                             +  +RGL+PS+++S+PV+++RP EFKD
Sbjct: 61  RRRPRRRFVFAPGQEMAAVATRRGLDPSVLRSIPVIVFRPKEFKD 105


>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
 Frame = -2

Query: 283 MDDPNSRNELKDSIAIKIGGQVMFAAIILLFLTVVFAVFIHI-----------TXXXXXX 137
           M D    + L DS A+++ G++M  AII+LF  VVF +F+H+                  
Sbjct: 14  MGDSFDSSSLDDSAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGG 73

Query: 136 XXXXXXXXXXXXSDNNNVLDQQRGLEPSIIQSLPVVIYRPNEFKD 2
                         +  +   +RGL+PSI+ S+PV+++RP EFKD
Sbjct: 74  SRRRRRRFVFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKD 118


>ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like [Vitis vinifera]
          Length = 304

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
 Frame = -2

Query: 283 MDDPNSRNELKDSIAIKIGGQVMFAAIILLFLTVVFAVFIHI-----------TXXXXXX 137
           M D    + L DS A+++ G++M  AII+LF  VVF +F+H+                  
Sbjct: 1   MGDSFDSSSLDDSAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGG 60

Query: 136 XXXXXXXXXXXXSDNNNVLDQQRGLEPSIIQSLPVVIYRPNEFKD 2
                         +  +   +RGL+PSI+ S+PV+++RP EFKD
Sbjct: 61  SRRRRRRFVFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKD 105


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
 Frame = -2

Query: 283 MDDPNSRNELKDSIAIKIGGQVMFAAIILLFLTVVFAVFIHI-----------TXXXXXX 137
           M D    + L DS A+++ G++M  AII+LF  VVF +F+H+                  
Sbjct: 1   MGDSFDSSSLDDSAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGG 60

Query: 136 XXXXXXXXXXXXSDNNNVLDQQRGLEPSIIQSLPVVIYRPNEFKD 2
                         +  +   +RGL+PSI+ S+PV+++RP EFKD
Sbjct: 61  SRRRRRRFVFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKD 105


Top