BLASTX nr result

ID: Cinnamomum25_contig00014856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00014856
         (334 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660329.1| PREDICTED: double-stranded RNA-binding prote...   103   6e-20
ref|XP_010660325.1| PREDICTED: double-stranded RNA-binding prote...   102   8e-20
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   102   8e-20
ref|XP_007033051.1| DsRNA-binding domain-like superfamily protei...    97   4e-18
ref|XP_010279670.1| PREDICTED: uncharacterized protein LOC104613...    96   9e-18
gb|KDO63093.1| hypothetical protein CISIN_1g014689mg [Citrus sin...    96   1e-17
ref|XP_006482141.1| PREDICTED: double-stranded RNA-binding prote...    96   1e-17
ref|XP_006430633.1| hypothetical protein CICLE_v10011836mg [Citr...    96   1e-17
ref|XP_010274677.1| PREDICTED: double-stranded RNA-binding prote...    95   2e-17
gb|KJB48212.1| hypothetical protein B456_008G058500 [Gossypium r...    93   6e-17
gb|KJB48210.1| hypothetical protein B456_008G058500 [Gossypium r...    93   6e-17
gb|KJB48209.1| hypothetical protein B456_008G058500 [Gossypium r...    93   6e-17
ref|XP_012436754.1| PREDICTED: double-stranded RNA-binding prote...    93   6e-17
ref|XP_012436747.1| PREDICTED: double-stranded RNA-binding prote...    93   6e-17
gb|KHG01891.1| Double-stranded RNA-binding 4 [Gossypium arboreum]      93   6e-17
ref|XP_012077780.1| PREDICTED: double-stranded RNA-binding prote...    93   8e-17
ref|XP_010924868.1| PREDICTED: double-stranded RNA-binding prote...    91   3e-16
ref|XP_010924853.1| PREDICTED: double-stranded RNA-binding prote...    91   3e-16
ref|XP_010924844.1| PREDICTED: double-stranded RNA-binding prote...    91   3e-16
ref|XP_008810976.1| PREDICTED: double-stranded RNA-binding prote...    91   3e-16

>ref|XP_010660329.1| PREDICTED: double-stranded RNA-binding protein 4 isoform X2 [Vitis
           vinifera]
          Length = 357

 Score =  103 bits (256), Expect = 6e-20
 Identities = 47/61 (77%), Positives = 54/61 (88%)
 Frame = -3

Query: 185 SVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSNRK 6
           S+PEH MHKNRLQEYTQRSA+PLP+YQT+NEG QHAPKFR++VLVDG TY S   FS+RK
Sbjct: 16  SLPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPNTFSHRK 75

Query: 5   A 3
           A
Sbjct: 76  A 76


>ref|XP_010660325.1| PREDICTED: double-stranded RNA-binding protein 4 isoform X1 [Vitis
           vinifera] gi|731417502|ref|XP_010660326.1| PREDICTED:
           double-stranded RNA-binding protein 4 isoform X1 [Vitis
           vinifera] gi|731417504|ref|XP_010660327.1| PREDICTED:
           double-stranded RNA-binding protein 4 isoform X1 [Vitis
           vinifera] gi|731417506|ref|XP_010660328.1| PREDICTED:
           double-stranded RNA-binding protein 4 isoform X1 [Vitis
           vinifera]
          Length = 357

 Score =  102 bits (255), Expect = 8e-20
 Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 3/67 (4%)
 Frame = -3

Query: 194 PKPS---VPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQ 24
           P PS   +PEH MHKNRLQEYTQRSA+PLP+YQT+NEG QHAPKFR++VLVDG TY S  
Sbjct: 10  PAPSSTRLPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPN 69

Query: 23  MFSNRKA 3
            FS+RKA
Sbjct: 70  TFSHRKA 76


>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4 isoform X3 [Vitis
           vinifera] gi|731417510|ref|XP_010660330.1| PREDICTED:
           double-stranded RNA-binding protein 4 isoform X3 [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score =  102 bits (255), Expect = 8e-20
 Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 3/67 (4%)
 Frame = -3

Query: 194 PKPS---VPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQ 24
           P PS   +PEH MHKNRLQEYTQRSA+PLP+YQT+NEG QHAPKFR++VLVDG TY S  
Sbjct: 10  PAPSSTRLPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPN 69

Query: 23  MFSNRKA 3
            FS+RKA
Sbjct: 70  TFSHRKA 76


>ref|XP_007033051.1| DsRNA-binding domain-like superfamily protein, putative [Theobroma
           cacao] gi|508712080|gb|EOY03977.1| DsRNA-binding
           domain-like superfamily protein, putative [Theobroma
           cacao]
          Length = 311

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200 TAPKPS-VPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQ 24
           +AP PS  PE  MHKNRLQEYTQRS++PLP+YQT NEG+ HAP+FR++VLVDGT+Y S  
Sbjct: 18  SAPNPSRAPEPLMHKNRLQEYTQRSSIPLPVYQTTNEGSLHAPRFRSTVLVDGTSYTSLD 77

Query: 23  MFSNRKA 3
            FS+RKA
Sbjct: 78  TFSHRKA 84


>ref|XP_010279670.1| PREDICTED: uncharacterized protein LOC104613526 [Nelumbo nucifera]
          Length = 287

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 42/63 (66%), Positives = 52/63 (82%)
 Frame = -3

Query: 191 KPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSN 12
           KPS PE+ MHKNRL EY Q+SA+PLP+Y ++NEG  HAPKFR++VL+DG TY S + FSN
Sbjct: 6   KPSFPENLMHKNRLHEYAQKSAIPLPVYSSVNEGAPHAPKFRSTVLIDGETYTSFRTFSN 65

Query: 11  RKA 3
           RKA
Sbjct: 66  RKA 68


>gb|KDO63093.1| hypothetical protein CISIN_1g014689mg [Citrus sinensis]
          Length = 420

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
 Frame = -3

Query: 227 ASAEATHLQTAP----KPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRAS 60
           A+A A+   TAP       VPEH MHKNRLQE+ QRS +PLP+YQ+ NEG QHAPKFRAS
Sbjct: 49  ATASASKSVTAPVVLTPNRVPEHLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRAS 108

Query: 59  VLVDGTTYWSCQMFSNRKA 3
           V VDG TY S   FS+RKA
Sbjct: 109 VSVDGVTYTSPNTFSHRKA 127


>ref|XP_006482141.1| PREDICTED: double-stranded RNA-binding protein 4-like [Citrus
           sinensis]
          Length = 420

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
 Frame = -3

Query: 227 ASAEATHLQTAP----KPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRAS 60
           A+A A+   TAP       VPEH MHKNRLQE+ QRS +PLP+YQ+ NEG QHAPKFRAS
Sbjct: 49  ATASASKSVTAPVVLTPNRVPEHLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRAS 108

Query: 59  VLVDGTTYWSCQMFSNRKA 3
           V VDG TY S   FS+RKA
Sbjct: 109 VSVDGVTYTSPNTFSHRKA 127


>ref|XP_006430633.1| hypothetical protein CICLE_v10011836mg [Citrus clementina]
           gi|557532690|gb|ESR43873.1| hypothetical protein
           CICLE_v10011836mg [Citrus clementina]
          Length = 418

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
 Frame = -3

Query: 227 ASAEATHLQTAP----KPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRAS 60
           A+A A+   TAP       VPEH MHKNRLQE+ QRS +PLP+YQ+ NEG QHAPKFRAS
Sbjct: 47  ATASASKSVTAPVVLTPNRVPEHLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRAS 106

Query: 59  VLVDGTTYWSCQMFSNRKA 3
           V VDG TY S   FS+RKA
Sbjct: 107 VSVDGVTYTSPNTFSHRKA 125


>ref|XP_010274677.1| PREDICTED: double-stranded RNA-binding protein 4-like [Nelumbo
           nucifera]
          Length = 326

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = -3

Query: 191 KPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSN 12
           KPS PE+ MHKNRL EY Q+SA+PLP+Y  +NEG  HAPKFR++VL+DG TY S + FSN
Sbjct: 6   KPSFPENLMHKNRLHEYAQKSAIPLPVYSCVNEGAPHAPKFRSTVLIDGETYTSFRTFSN 65

Query: 11  RKA 3
           RKA
Sbjct: 66  RKA 68


>gb|KJB48212.1| hypothetical protein B456_008G058500 [Gossypium raimondii]
          Length = 474

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -3

Query: 179 PEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSNRKA 3
           PE FMHKNRLQE+TQRS++ LP+YQT+NEG+ HAP+FR+SVLVDG TY S   FSNRKA
Sbjct: 176 PESFMHKNRLQEFTQRSSIQLPVYQTVNEGSVHAPQFRSSVLVDGVTYTSEATFSNRKA 234


>gb|KJB48210.1| hypothetical protein B456_008G058500 [Gossypium raimondii]
          Length = 281

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -3

Query: 179 PEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSNRKA 3
           PE FMHKNRLQE+TQRS++ LP+YQT+NEG+ HAP+FR+SVLVDG TY S   FSNRKA
Sbjct: 43  PESFMHKNRLQEFTQRSSIQLPVYQTVNEGSVHAPQFRSSVLVDGVTYTSEATFSNRKA 101


>gb|KJB48209.1| hypothetical protein B456_008G058500 [Gossypium raimondii]
          Length = 326

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -3

Query: 179 PEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSNRKA 3
           PE FMHKNRLQE+TQRS++ LP+YQT+NEG+ HAP+FR+SVLVDG TY S   FSNRKA
Sbjct: 43  PESFMHKNRLQEFTQRSSIQLPVYQTVNEGSVHAPQFRSSVLVDGVTYTSEATFSNRKA 101


>ref|XP_012436754.1| PREDICTED: double-stranded RNA-binding protein 4-like isoform X2
           [Gossypium raimondii] gi|763781136|gb|KJB48207.1|
           hypothetical protein B456_008G058500 [Gossypium
           raimondii]
          Length = 323

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -3

Query: 179 PEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSNRKA 3
           PE FMHKNRLQE+TQRS++ LP+YQT+NEG+ HAP+FR+SVLVDG TY S   FSNRKA
Sbjct: 43  PESFMHKNRLQEFTQRSSIQLPVYQTVNEGSVHAPQFRSSVLVDGVTYTSEATFSNRKA 101


>ref|XP_012436747.1| PREDICTED: double-stranded RNA-binding protein 4-like isoform X1
           [Gossypium raimondii] gi|823205300|ref|XP_012436748.1|
           PREDICTED: double-stranded RNA-binding protein 4-like
           isoform X1 [Gossypium raimondii]
           gi|823205303|ref|XP_012436749.1| PREDICTED:
           double-stranded RNA-binding protein 4-like isoform X1
           [Gossypium raimondii] gi|823205306|ref|XP_012436750.1|
           PREDICTED: double-stranded RNA-binding protein 4-like
           isoform X1 [Gossypium raimondii]
           gi|823205309|ref|XP_012436751.1| PREDICTED:
           double-stranded RNA-binding protein 4-like isoform X1
           [Gossypium raimondii] gi|823205312|ref|XP_012436753.1|
           PREDICTED: double-stranded RNA-binding protein 4-like
           isoform X1 [Gossypium raimondii]
           gi|763781135|gb|KJB48206.1| hypothetical protein
           B456_008G058500 [Gossypium raimondii]
           gi|763781137|gb|KJB48208.1| hypothetical protein
           B456_008G058500 [Gossypium raimondii]
           gi|763781140|gb|KJB48211.1| hypothetical protein
           B456_008G058500 [Gossypium raimondii]
           gi|763781142|gb|KJB48213.1| hypothetical protein
           B456_008G058500 [Gossypium raimondii]
          Length = 341

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -3

Query: 179 PEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSNRKA 3
           PE FMHKNRLQE+TQRS++ LP+YQT+NEG+ HAP+FR+SVLVDG TY S   FSNRKA
Sbjct: 43  PESFMHKNRLQEFTQRSSIQLPVYQTVNEGSVHAPQFRSSVLVDGVTYTSEATFSNRKA 101


>gb|KHG01891.1| Double-stranded RNA-binding 4 [Gossypium arboreum]
          Length = 341

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -3

Query: 179 PEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSCQMFSNRKA 3
           PE FMHKNRLQE+TQRS++ LP+YQT+NEG+ HAP+FR+SVLVDG TY S   FSNRKA
Sbjct: 43  PESFMHKNRLQEFTQRSSIQLPVYQTVNEGSVHAPQFRSSVLVDGVTYTSETTFSNRKA 101


>ref|XP_012077780.1| PREDICTED: double-stranded RNA-binding protein 4-like [Jatropha
           curcas] gi|643723712|gb|KDP33156.1| hypothetical protein
           JCGZ_13421 [Jatropha curcas]
          Length = 478

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 44/74 (59%), Positives = 54/74 (72%)
 Frame = -3

Query: 227 ASAEATHLQTAPKPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVD 48
           A A AT    A  PS P   MHKNRLQEYTQ+S+L LP+YQT+NEG QHAP+FR++V+VD
Sbjct: 35  APAPATSTVAASTPSSPHQLMHKNRLQEYTQKSSLQLPIYQTVNEGHQHAPRFRSTVIVD 94

Query: 47  GTTYWSCQMFSNRK 6
           G  Y S   F++RK
Sbjct: 95  GEQYTSPNTFAHRK 108


>ref|XP_010924868.1| PREDICTED: double-stranded RNA-binding protein 4-like isoform X4
           [Elaeis guineensis]
          Length = 320

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 40/67 (59%), Positives = 55/67 (82%)
 Frame = -3

Query: 206 LQTAPKPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSC 27
           ++ A +P+ PE FMHKNRLQEY QRS++PLP+YQT+NEG  HAP+FR++VL+DG T+ S 
Sbjct: 1   MEVAARPN-PEQFMHKNRLQEYAQRSSIPLPIYQTVNEGHPHAPQFRSTVLIDGVTFISS 59

Query: 26  QMFSNRK 6
           + F +RK
Sbjct: 60  RTFPHRK 66


>ref|XP_010924853.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
           [Elaeis guineensis]
          Length = 358

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 40/67 (59%), Positives = 55/67 (82%)
 Frame = -3

Query: 206 LQTAPKPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSC 27
           ++ A +P+ PE FMHKNRLQEY QRS++PLP+YQT+NEG  HAP+FR++VL+DG T+ S 
Sbjct: 1   MEVAARPN-PEQFMHKNRLQEYAQRSSIPLPIYQTVNEGHPHAPQFRSTVLIDGVTFISS 59

Query: 26  QMFSNRK 6
           + F +RK
Sbjct: 60  RTFPHRK 66


>ref|XP_010924844.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
           [Elaeis guineensis]
          Length = 359

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 40/67 (59%), Positives = 55/67 (82%)
 Frame = -3

Query: 206 LQTAPKPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSC 27
           ++ A +P+ PE FMHKNRLQEY QRS++PLP+YQT+NEG  HAP+FR++VL+DG T+ S 
Sbjct: 1   MEVAARPN-PEQFMHKNRLQEYAQRSSIPLPIYQTVNEGHPHAPQFRSTVLIDGVTFISS 59

Query: 26  QMFSNRK 6
           + F +RK
Sbjct: 60  RTFPHRK 66


>ref|XP_008810976.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
           [Phoenix dactylifera]
          Length = 368

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = -3

Query: 206 LQTAPKPSVPEHFMHKNRLQEYTQRSALPLPLYQTINEGTQHAPKFRASVLVDGTTYWSC 27
           ++ A +P+ PE FMHKNRLQEY QRS++PLP+YQTINEG  HAP+FR++VL+DG T+ S 
Sbjct: 11  MEVAARPN-PEQFMHKNRLQEYAQRSSIPLPIYQTINEGHPHAPQFRSTVLIDGVTFISS 69

Query: 26  QMFSNRK 6
           + F +RK
Sbjct: 70  RTFLHRK 76


Top