BLASTX nr result

ID: Cinnamomum25_contig00014817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00014817
         (920 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010252404.1| PREDICTED: zinc finger CCCH domain-containin...    67   1e-08
ref|XP_011506588.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    62   7e-07

>ref|XP_010252404.1| PREDICTED: zinc finger CCCH domain-containing protein 5 [Nelumbo
            nucifera]
          Length = 826

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 70/257 (27%), Positives = 101/257 (39%), Gaps = 2/257 (0%)
 Frame = -2

Query: 829  HDSEGYYPDLNRVQHGSHVSRRARTSSQRKSVDSSYYDRKLEQNYDSEDNEQYDGNHRSR 650
            HDS   Y DL+R +  SH SRR  +S+Q K  DS   D K E+  ++    +YDG H S 
Sbjct: 561  HDSSRKYSDLHRARKHSHSSRREGSSTQIKESDSLDEDMKSEECGEAYITSRYDGRHTSH 620

Query: 649  DYSSTISHDEDGHRDKSRSSKGKRNNNLKMSYHDECGKLKEMYDFDDQAXXXXXXXXXXX 470
            D      HD D H D S    G        S+H+E  K + +   DDQ            
Sbjct: 621  D------HDSDHHTDDSMDKCGSWETE---SFHEEHDKSRRI--DDDQQRYNWKYKSHGQ 669

Query: 469  XXXXXYEENRSPSSNQSRRECASSLEKGTDSPSKKRKVEENHKGRMKDRSPHCLNQYKRR 290
                 Y E RS  S QS  +  S+  +     S   + ++ +K + +     C +  K  
Sbjct: 670  NSGWRYHEKRSRCSRQSAHDRHSNSRQKEKHRSHTHERDKVYKYQKQGSDDECSSFNKSE 729

Query: 289  YKSRKLDLSDNKYFXXXXXXXXXXXXXXXXSVHDATTRAHSWSS--SENSDNLRRSRHHG 116
             KS +    D  Y+                SV + +  +HS      +NSDN    + + 
Sbjct: 730  GKSCQ---QDEAYY----------------SVPNNSNNSHSTPEEFGDNSDNAEHEKKYR 770

Query: 115  KDRRDARKRNMNVEGKD 65
              RR  R R    E K+
Sbjct: 771  VSRR-GRDRRKKYESKE 786


>ref|XP_011506588.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Ceratosolen solmsi
            marchali]
          Length = 1847

 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 8/292 (2%)
 Frame = -2

Query: 904  ENEKAAEKSISNISDKGEEKSRSCAHDSEGYYPDLNRVQHGSHVSRRARTSSQRKSVDSS 725
            E E+++E+  SN  ++G  + R  + + E    + NR +    + R       R+   S 
Sbjct: 638  ERERSSEREKSN--ERGRSRDRERSRERENREKEKNRERENREMERSKERGRSREREKSR 695

Query: 724  YYDRKLEQNYDSEDNEQYDGNHRSRDYSSTISHDEDGHRDKSRSSKGKRNNNLKMS--YH 551
              DR  E+  +S D E+     RSRD   +   ++   R++SR    ++ N  K      
Sbjct: 696  ERDRSRERE-ESRDRERSRERERSRDRERSREREKSRERERSRDRHRRKENEDKERDRSR 754

Query: 550  DEC--GKLKEMYDFDDQAXXXXXXXXXXXXXXXXYEENRSPSSNQSRRECASSLEKGTDS 377
            D+C   + +E     D+                  +ENR    ++ R +     E+   S
Sbjct: 755  DKCKENENRERERSRDRRKENDDRERDRSRDRKKEDENRERGRSKDRNKDDGDRERHR-S 813

Query: 376  PSKKRKVEENHKGRMKDRSPHCLNQYKRRYKSRKLDLSDNKYFXXXXXXXXXXXXXXXXS 197
              ++++ E   +GR KDR+    ++ + R + R+ +  +N+                   
Sbjct: 814  RDRRKEDENRERGRSKDRNKDDGDRERHRSRDRRKE-DENRERGRSKDRNKDDGDRERHR 872

Query: 196  VHDAT----TRAHSWSSSENSDNLRRSRHHGKDRRDARKRNMNVEGKDRDSD 53
              D       R    S   N D+  R RH  +DRR   +       KDR+ D
Sbjct: 873  SRDRRKEDENRERGRSKDRNKDDGDRERHRSRDRRKEDENRERGRSKDRNKD 924


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