BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00014503
         (1111 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275173.1| PREDICTED: pentatricopeptide repeat-containi...   247   1e-62
ref|XP_010905314.1| PREDICTED: pentatricopeptide repeat-containi...   229   4e-57
ref|XP_010905312.1| PREDICTED: pentatricopeptide repeat-containi...   229   4e-57
ref|XP_007029498.1| Pentatricopeptide repeat-containing protein,...   227   1e-56
ref|XP_007029497.1| Pentatricopeptide repeat-containing protein,...   227   1e-56
ref|XP_007029496.1| Pentatricopeptide repeat-containing protein,...   227   1e-56
ref|XP_007029495.1| Pentatricopeptide repeat-containing protein,...   227   1e-56
ref|XP_008453834.1| PREDICTED: pentatricopeptide repeat-containi...   226   2e-56
ref|XP_008453831.1| PREDICTED: pentatricopeptide repeat-containi...   226   2e-56
ref|XP_006850860.2| PREDICTED: pentatricopeptide repeat-containi...   224   9e-56
ref|XP_008808808.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-55
ref|XP_009397509.1| PREDICTED: pentatricopeptide repeat-containi...   220   2e-54
ref|XP_009397497.1| PREDICTED: pentatricopeptide repeat-containi...   220   2e-54
ref|XP_012459106.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-54
ref|XP_012459104.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-54
gb|KJB76398.1| hypothetical protein B456_012G086600 [Gossypium r...   219   2e-54
gb|KJB76397.1| hypothetical protein B456_012G086600 [Gossypium r...   219   2e-54
ref|XP_012459103.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-54
ref|XP_012459102.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-54
gb|KHG03831.1| hypothetical protein F383_26634 [Gossypium arboreum]   219   2e-54

>ref|XP_010275173.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Nelumbo nucifera]
          Length = 536

 Score =  247 bits (631), Expect = 1e-62
 Identities = 131/276 (47%), Positives = 181/276 (65%), Gaps = 6/276 (2%)
 Frame = -2

Query: 810 MGMQFMYHHNMPQ------IASRLCCFSHNPSYRGRSDGILRVEASKTAFDAIWGNDGEI 649
           MG QF +     Q      ++S   CF       G  +  +  + SKT+F +  G     
Sbjct: 1   MGTQFAFPLKASQLLSIHGVSSPFSCF-------GCRNSSVNCKTSKTSFGSTQGK---- 49

Query: 648 ALVGFRRDLKIEKSSGKLNPVPKQLIDDYNNALDDRLEVSSELYNNLIRAYCTEGDLDKA 469
              G   +  +  S    + +   + ++ N +  ++ E+S E+YN  IR YC EGD+DK+
Sbjct: 50  ---GVEEETFLMASRRCPSTINNLIFNNSNISCSNKEEISCEIYNISIRNYCREGDIDKS 106

Query: 468 MLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMKYLGLQPGAKDYNILLRG 289
           M L+A MEALG+ P   SY+ +I+A GSVGRTLEAD +FQEM++ G +P  K YN+LL+G
Sbjct: 107 MALLAQMEALGIRPNLISYTCVIEALGSVGRTLEADAIFQEMRWSGFEPRVKAYNVLLKG 166

Query: 288 FLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLEDTWSVIGEMKCKGFHLN 109
           FLRKG L LA+ VL+EM D+ I R  +TY +LLD+YVHAGRL+DTWSVI EMK +G  LN
Sbjct: 167 FLRKGLLGLADRVLLEMGDLDIGRNQDTYEILLDYYVHAGRLDDTWSVINEMKREGLKLN 226

Query: 108 SRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
           S VYSK+I++YRDNGMW+KAM+++++MREMGVPLDR
Sbjct: 227 SYVYSKIINLYRDNGMWQKAMDVLREMREMGVPLDR 262



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 42/183 (22%), Positives = 85/183 (46%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N    + L+++S +Y+ +I  Y   G   KAM ++  M  +G+      Y+ +ID FG  
Sbjct: 216 NEMKREGLKLNSYVYSKIINLYRDNGMWQKAMDVLREMREMGVPLDRRIYNSIIDTFGKY 275

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETY 202
           G   EA   F+ M+  G++P    +N L+R   + G++  A   L +M++ G+    + +
Sbjct: 276 GELEEAVGAFENMQKEGIRPDIMTWNSLIRWHCKAGEVGGALEFLTKMQEQGLYPDPKIF 335

Query: 201 MLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMRE 22
           + ++      G+          MK +G   +  +Y+ +  IY   G ++ A   +  ++ 
Sbjct: 336 VNIISRLAEQGKWNAIKKNFENMKHRGLRKSGVIYAVLADIYGQYGRFQDADECLLALKS 395

Query: 21  MGV 13
            G+
Sbjct: 396 EGL 398



 Score = 62.4 bits (150), Expect = 6e-07
 Identities = 39/173 (22%), Positives = 81/173 (46%)
 Frame = -2

Query: 531 SSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVF 352
           + + Y  L+  Y   G LD    +I  M+  G+   +  YS +I+ +   G   +A  V 
Sbjct: 191 NQDTYEILLDYYVHAGRLDDTWSVINEMKREGLKLNSYVYSKIINLYRDNGMWQKAMDVL 250

Query: 351 QEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHA 172
           +EM+ +G+    + YN ++  F + G+L+ A      M+  GI   + T+  L+ ++  A
Sbjct: 251 REMREMGVPLDRRIYNSIIDTFGKYGELEEAVGAFENMQKEGIRPDIMTWNSLIRWHCKA 310

Query: 171 GRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
           G +      + +M+ +G + + +++  +IS   + G W       + M+  G+
Sbjct: 311 GEVGGALEFLTKMQEQGLYPDPKIFVNIISRLAEQGKWNAIKKNFENMKHRGL 363



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 42/169 (24%), Positives = 78/169 (46%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           YN L++ +  +G L  A  ++  M  L +     +Y  L+D +   GR  +   V  EMK
Sbjct: 160 YNVLLKGFLRKGLLGLADRVLLEMGDLDIGRNQDTYEILLDYYVHAGRLDDTWSVINEMK 219

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
             GL+  +  Y+ ++  +   G  Q A  VL EMR++G+      Y  ++D +   G LE
Sbjct: 220 REGLKLNSYVYSKIINLYRDNGMWQKAMDVLREMREMGVPLDRRIYNSIIDTFGKYGELE 279

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
           +       M+ +G   +   ++ +I  +   G    A+  + +M+E G+
Sbjct: 280 EAVGAFENMQKEGIRPDIMTWNSLIRWHCKAGEVGGALEFLTKMQEQGL 328



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 33/105 (31%), Positives = 54/105 (51%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           L+ S+ ++  L  AY  +G  ++ + ++  MEA G+ P     + LI+AFG  GR LEA 
Sbjct: 398 LKPSANMFCALANAYAQQGLCEQTVRILQLMEADGIEPNLIMLNMLINAFGVAGRHLEAL 457

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG 226
            +F  MK  G+ P    Y+ L++ F+R  +      +  EM   G
Sbjct: 458 SIFYHMKDSGINPDVVTYSTLMKAFIRARKFDQVPGIYKEMECAG 502


>ref|XP_010905314.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X2 [Elaeis guineensis]
          Length = 494

 Score =  229 bits (583), Expect = 4e-57
 Identities = 113/182 (62%), Positives = 144/182 (79%)
 Frame = -2

Query: 549 DDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTL 370
           ++R E+S E Y+  I+A+C+ G LD+++ L+A MEA GM P AASY+ L+ A GSVGRTL
Sbjct: 66  EERQELSWESYDRWIQAHCSRGRLDRSLDLLARMEASGMRPSAASYARLVRALGSVGRTL 125

Query: 369 EADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLL 190
           EAD VF+EMK+ GL+PG +DYN LLR FLRKGQL+LA+ +L+EM + G+ R  ETY+LLL
Sbjct: 126 EADAVFREMKWAGLRPGLRDYNALLRAFLRKGQLRLADCLLVEMGEEGVGRNRETYLLLL 185

Query: 189 DFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVP 10
           D YV AGRLEDTW V+GEMK  GF L+SR YS+V+ +YRDNGMWKKAM LV +MRE+GV 
Sbjct: 186 DSYVRAGRLEDTWWVLGEMKRMGFPLDSRAYSQVLRLYRDNGMWKKAMGLVVEMRELGVA 245

Query: 9   LD 4
            D
Sbjct: 246 PD 247



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 47/170 (27%), Positives = 87/170 (51%)
 Frame = -2

Query: 534 VSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVV 355
           + S  Y+ ++R Y   G   KAM L+  M  LG+ P    Y+ +I+ FG  G+  EA  +
Sbjct: 211 LDSRAYSQVLRLYRDNGMWKKAMGLVVEMRELGVAPDGRIYNEIIETFGKHGQLDEAVKM 270

Query: 354 FQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVH 175
           F+ M+  GL+P    +N L+R   + G L+ A     +M++ G+    + +  ++     
Sbjct: 271 FETMQGEGLKPDIVAWNALIRWHCQAGHLKQALEFFTKMQEEGLYPDPKIFTTIITRLGE 330

Query: 174 AGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMR 25
            GR ++  ++   MKC+GF  +  +Y+ ++ IY   GM++ A   V  ++
Sbjct: 331 HGRWDEIRNIFESMKCRGFRNSGIIYAVLVDIYGQYGMFQDAEECVAALK 380



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 38/170 (22%), Positives = 85/170 (50%)
 Frame = -2

Query: 525 ELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQE 346
           E Y  L+ +Y   G L+    ++  M+ +G    + +YS ++  +   G   +A  +  E
Sbjct: 179 ETYLLLLDSYVRAGRLEDTWWVLGEMKRMGFPLDSRAYSQVLRLYRDNGMWKKAMGLVVE 238

Query: 345 MKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGR 166
           M+ LG+ P  + YN ++  F + GQL  A  +   M+  G++  +  +  L+ ++  AG 
Sbjct: 239 MRELGVAPDGRIYNEIIETFGKHGQLDEAVKMFETMQGEGLKPDIVAWNALIRWHCQAGH 298

Query: 165 LEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMG 16
           L+       +M+ +G + + ++++ +I+   ++G W +  N+ + M+  G
Sbjct: 299 LKQALEFFTKMQEEGLYPDPKIFTTIITRLGEHGRWDEIRNIFESMKCRG 348



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 42/169 (24%), Positives = 85/169 (50%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           YN L+RA+  +G L  A  L+  M   G+     +Y  L+D++   GR  +   V  EMK
Sbjct: 146 YNALLRAFLRKGQLRLADCLLVEMGEEGVGRNRETYLLLLDSYVRAGRLEDTWWVLGEMK 205

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
            +G    ++ Y+ +LR +   G  + A  +++EMR++G+      Y  +++ +   G+L+
Sbjct: 206 RMGFPLDSRAYSQVLRLYRDNGMWKKAMGLVVEMRELGVAPDGRIYNEIIETFGKHGQLD 265

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
           +   +   M+ +G   +   ++ +I  +   G  K+A+    +M+E G+
Sbjct: 266 EAVKMFETMQGEGLKPDIVAWNALIRWHCQAGHLKQALEFFTKMQEEGL 314


>ref|XP_010905312.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Elaeis guineensis]
           gi|743867431|ref|XP_010905313.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Elaeis guineensis]
          Length = 518

 Score =  229 bits (583), Expect = 4e-57
 Identities = 113/182 (62%), Positives = 144/182 (79%)
 Frame = -2

Query: 549 DDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTL 370
           ++R E+S E Y+  I+A+C+ G LD+++ L+A MEA GM P AASY+ L+ A GSVGRTL
Sbjct: 66  EERQELSWESYDRWIQAHCSRGRLDRSLDLLARMEASGMRPSAASYARLVRALGSVGRTL 125

Query: 369 EADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLL 190
           EAD VF+EMK+ GL+PG +DYN LLR FLRKGQL+LA+ +L+EM + G+ R  ETY+LLL
Sbjct: 126 EADAVFREMKWAGLRPGLRDYNALLRAFLRKGQLRLADCLLVEMGEEGVGRNRETYLLLL 185

Query: 189 DFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVP 10
           D YV AGRLEDTW V+GEMK  GF L+SR YS+V+ +YRDNGMWKKAM LV +MRE+GV 
Sbjct: 186 DSYVRAGRLEDTWWVLGEMKRMGFPLDSRAYSQVLRLYRDNGMWKKAMGLVVEMRELGVA 245

Query: 9   LD 4
            D
Sbjct: 246 PD 247



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 47/170 (27%), Positives = 87/170 (51%)
 Frame = -2

Query: 534 VSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVV 355
           + S  Y+ ++R Y   G   KAM L+  M  LG+ P    Y+ +I+ FG  G+  EA  +
Sbjct: 211 LDSRAYSQVLRLYRDNGMWKKAMGLVVEMRELGVAPDGRIYNEIIETFGKHGQLDEAVKM 270

Query: 354 FQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVH 175
           F+ M+  GL+P    +N L+R   + G L+ A     +M++ G+    + +  ++     
Sbjct: 271 FETMQGEGLKPDIVAWNALIRWHCQAGHLKQALEFFTKMQEEGLYPDPKIFTTIITRLGE 330

Query: 174 AGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMR 25
            GR ++  ++   MKC+GF  +  +Y+ ++ IY   GM++ A   V  ++
Sbjct: 331 HGRWDEIRNIFESMKCRGFRNSGIIYAVLVDIYGQYGMFQDAEECVAALK 380



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 38/170 (22%), Positives = 85/170 (50%)
 Frame = -2

Query: 525 ELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQE 346
           E Y  L+ +Y   G L+    ++  M+ +G    + +YS ++  +   G   +A  +  E
Sbjct: 179 ETYLLLLDSYVRAGRLEDTWWVLGEMKRMGFPLDSRAYSQVLRLYRDNGMWKKAMGLVVE 238

Query: 345 MKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGR 166
           M+ LG+ P  + YN ++  F + GQL  A  +   M+  G++  +  +  L+ ++  AG 
Sbjct: 239 MRELGVAPDGRIYNEIIETFGKHGQLDEAVKMFETMQGEGLKPDIVAWNALIRWHCQAGH 298

Query: 165 LEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMG 16
           L+       +M+ +G + + ++++ +I+   ++G W +  N+ + M+  G
Sbjct: 299 LKQALEFFTKMQEEGLYPDPKIFTTIITRLGEHGRWDEIRNIFESMKCRG 348



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 42/169 (24%), Positives = 85/169 (50%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           YN L+RA+  +G L  A  L+  M   G+     +Y  L+D++   GR  +   V  EMK
Sbjct: 146 YNALLRAFLRKGQLRLADCLLVEMGEEGVGRNRETYLLLLDSYVRAGRLEDTWWVLGEMK 205

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
            +G    ++ Y+ +LR +   G  + A  +++EMR++G+      Y  +++ +   G+L+
Sbjct: 206 RMGFPLDSRAYSQVLRLYRDNGMWKKAMGLVVEMRELGVAPDGRIYNEIIETFGKHGQLD 265

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
           +   +   M+ +G   +   ++ +I  +   G  K+A+    +M+E G+
Sbjct: 266 EAVKMFETMQGEGLKPDIVAWNALIRWHCQAGHLKQALEFFTKMQEEGL 314


>ref|XP_007029498.1| Pentatricopeptide repeat-containing protein, putative isoform 4
           [Theobroma cacao] gi|508718103|gb|EOY10000.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 4 [Theobroma cacao]
          Length = 477

 Score =  227 bits (579), Expect = 1e-56
 Identities = 107/179 (59%), Positives = 142/179 (79%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E++SEL+N  I+ YC  GD+D AM L+AHMEA+G HP + SY +LI++ GSVGRTLEAD 
Sbjct: 73  ELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADA 132

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM  LGL+P  + +N+LL+GFLRKG L+LA  VL+ M + G+ +  ETY +LLD+YV
Sbjct: 133 LFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYV 192

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
           +AGRLEDTW V+ EMK KG HLNS VYSK+I +YRDNGMW+KA+ +V+++RE G+ LDR
Sbjct: 193 NAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 42/183 (22%), Positives = 84/183 (45%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N   +  + ++S +Y+ +I  Y   G   KA+ ++  +   G+      Y+ +ID FG  
Sbjct: 205 NEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQIYNSIIDTFGKY 264

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETY 202
           G   EA  VF++MK   ++P    +N L++   + G L  A  +  EM++ G+    + +
Sbjct: 265 GELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPKIF 324

Query: 201 MLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMRE 22
           M L+      G+ +        MK +G      +Y+ ++ IY   G ++ A   +  ++ 
Sbjct: 325 MSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGRFQDAEVCISALKS 384

Query: 21  MGV 13
            G+
Sbjct: 385 EGL 387



 Score = 62.4 bits (150), Expect = 6e-07
 Identities = 38/176 (21%), Positives = 81/176 (46%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           + +  ++YN++I  +   G+L +A+ +   M+   + P   +++ LI      G   +A 
Sbjct: 247 ISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKAL 306

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFY 181
            +F EM+  GL P  K +  L+      G+  + +     M+  G +     Y +L+D Y
Sbjct: 307 ELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIY 366

Query: 180 VHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
              GR +D    I  +K +G   ++ ++  + + Y   G  ++ + ++Q M   G+
Sbjct: 367 GQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGI 422


>ref|XP_007029497.1| Pentatricopeptide repeat-containing protein, putative isoform 3
           [Theobroma cacao] gi|508718102|gb|EOY09999.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 3 [Theobroma cacao]
          Length = 489

 Score =  227 bits (579), Expect = 1e-56
 Identities = 107/179 (59%), Positives = 142/179 (79%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E++SEL+N  I+ YC  GD+D AM L+AHMEA+G HP + SY +LI++ GSVGRTLEAD 
Sbjct: 73  ELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADA 132

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM  LGL+P  + +N+LL+GFLRKG L+LA  VL+ M + G+ +  ETY +LLD+YV
Sbjct: 133 LFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYV 192

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
           +AGRLEDTW V+ EMK KG HLNS VYSK+I +YRDNGMW+KA+ +V+++RE G+ LDR
Sbjct: 193 NAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 42/183 (22%), Positives = 84/183 (45%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N   +  + ++S +Y+ +I  Y   G   KA+ ++  +   G+      Y+ +ID FG  
Sbjct: 205 NEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQIYNSIIDTFGKY 264

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETY 202
           G   EA  VF++MK   ++P    +N L++   + G L  A  +  EM++ G+    + +
Sbjct: 265 GELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPKIF 324

Query: 201 MLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMRE 22
           M L+      G+ +        MK +G      +Y+ ++ IY   G ++ A   +  ++ 
Sbjct: 325 MSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGRFQDAEVCISALKS 384

Query: 21  MGV 13
            G+
Sbjct: 385 EGL 387



 Score = 62.4 bits (150), Expect = 6e-07
 Identities = 38/176 (21%), Positives = 81/176 (46%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           + +  ++YN++I  +   G+L +A+ +   M+   + P   +++ LI      G   +A 
Sbjct: 247 ISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKAL 306

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFY 181
            +F EM+  GL P  K +  L+      G+  + +     M+  G +     Y +L+D Y
Sbjct: 307 ELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIY 366

Query: 180 VHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
              GR +D    I  +K +G   ++ ++  + + Y   G  ++ + ++Q M   G+
Sbjct: 367 GQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGI 422


>ref|XP_007029496.1| Pentatricopeptide repeat-containing protein, putative isoform 2
           [Theobroma cacao] gi|508718101|gb|EOY09998.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 2 [Theobroma cacao]
          Length = 487

 Score =  227 bits (579), Expect = 1e-56
 Identities = 107/179 (59%), Positives = 142/179 (79%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E++SEL+N  I+ YC  GD+D AM L+AHMEA+G HP + SY +LI++ GSVGRTLEAD 
Sbjct: 73  ELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADA 132

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM  LGL+P  + +N+LL+GFLRKG L+LA  VL+ M + G+ +  ETY +LLD+YV
Sbjct: 133 LFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYV 192

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
           +AGRLEDTW V+ EMK KG HLNS VYSK+I +YRDNGMW+KA+ +V+++RE G+ LDR
Sbjct: 193 NAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 42/183 (22%), Positives = 84/183 (45%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N   +  + ++S +Y+ +I  Y   G   KA+ ++  +   G+      Y+ +ID FG  
Sbjct: 205 NEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQIYNSIIDTFGKY 264

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETY 202
           G   EA  VF++MK   ++P    +N L++   + G L  A  +  EM++ G+    + +
Sbjct: 265 GELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPKIF 324

Query: 201 MLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMRE 22
           M L+      G+ +        MK +G      +Y+ ++ IY   G ++ A   +  ++ 
Sbjct: 325 MSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGRFQDAEVCISALKS 384

Query: 21  MGV 13
            G+
Sbjct: 385 EGL 387



 Score = 62.4 bits (150), Expect = 6e-07
 Identities = 38/176 (21%), Positives = 81/176 (46%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           + +  ++YN++I  +   G+L +A+ +   M+   + P   +++ LI      G   +A 
Sbjct: 247 ISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKAL 306

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFY 181
            +F EM+  GL P  K +  L+      G+  + +     M+  G +     Y +L+D Y
Sbjct: 307 ELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIY 366

Query: 180 VHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
              GR +D    I  +K +G   ++ ++  + + Y   G  ++ + ++Q M   G+
Sbjct: 367 GQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGI 422


>ref|XP_007029495.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao] gi|508718100|gb|EOY09997.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 513

 Score =  227 bits (579), Expect = 1e-56
 Identities = 107/179 (59%), Positives = 142/179 (79%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E++SEL+N  I+ YC  GD+D AM L+AHMEA+G HP + SY +LI++ GSVGRTLEAD 
Sbjct: 73  ELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADA 132

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM  LGL+P  + +N+LL+GFLRKG L+LA  VL+ M + G+ +  ETY +LLD+YV
Sbjct: 133 LFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYV 192

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
           +AGRLEDTW V+ EMK KG HLNS VYSK+I +YRDNGMW+KA+ +V+++RE G+ LDR
Sbjct: 193 NAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDR 251



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPK---------------------------- 424
           +N+LI+ +C  GDL KA+ L   M+  G++P                             
Sbjct: 289 WNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMK 348

Query: 423 -------AASYSYLIDAFGSVGRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQ 265
                   A Y+ L+D +G  GR  +A+V    +K  GL P A  + +L   + ++G  +
Sbjct: 349 SRGHQDVGAIYAILVDIYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCE 408

Query: 264 LAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVI 85
               VL  M   GIE  +    +L++ +  AGR E+  S+   ++  G   +   YS ++
Sbjct: 409 QTVKVLQIMEAEGIEPNIVMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLM 468

Query: 84  SIYRDNGMWKKAMNLVQQMREMGVPLDR 1
             +     + +   + ++M   G   DR
Sbjct: 469 KAFIRAKKFDRVPEIYREMESSGCTPDR 496



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 42/183 (22%), Positives = 84/183 (45%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N   +  + ++S +Y+ +I  Y   G   KA+ ++  +   G+      Y+ +ID FG  
Sbjct: 205 NEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQIYNSIIDTFGKY 264

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETY 202
           G   EA  VF++MK   ++P    +N L++   + G L  A  +  EM++ G+    + +
Sbjct: 265 GELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPKIF 324

Query: 201 MLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMRE 22
           M L+      G+ +        MK +G      +Y+ ++ IY   G ++ A   +  ++ 
Sbjct: 325 MSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGRFQDAEVCISALKS 384

Query: 21  MGV 13
            G+
Sbjct: 385 EGL 387



 Score = 62.4 bits (150), Expect = 6e-07
 Identities = 38/176 (21%), Positives = 81/176 (46%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           + +  ++YN++I  +   G+L +A+ +   M+   + P   +++ LI      G   +A 
Sbjct: 247 ISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKAL 306

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFY 181
            +F EM+  GL P  K +  L+      G+  + +     M+  G +     Y +L+D Y
Sbjct: 307 ELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIY 366

Query: 180 VHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
              GR +D    I  +K +G   ++ ++  + + Y   G  ++ + ++Q M   G+
Sbjct: 367 GQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGI 422


>ref|XP_008453834.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X2 [Cucumis melo]
          Length = 447

 Score =  226 bits (576), Expect = 2e-56
 Identities = 127/252 (50%), Positives = 170/252 (67%), Gaps = 7/252 (2%)
 Frame = -2

Query: 735 SYRGRSDGILRVEASKTAFDAIWGNDGEIALVGFRRDLKIEKSSGKLNPVPKQLIDD--- 565
           S+ G SD +L  ++SK  FD I+  DG I L  FR +         LN   K  +DD   
Sbjct: 16  SFGGFSDHLLHRDSSK--FDGIYTFDGAI-LKFFRNNF--------LNLASKAAVDDNCI 64

Query: 564 ----YNNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLID 397
               ++  +D+  E+SSE  N LI  YC  G++D AM L+AHME++G+H   ASY+YLI+
Sbjct: 65  VSSRWHGCIDEE-ELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYTYLIE 123

Query: 396 AFGSVGRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIER 217
           A G+VGRTLEAD++FQEM   G +P     N LLRGFLRKG L LA  VL+ M D+ I++
Sbjct: 124 ALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKK 183

Query: 216 TLETYMLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLV 37
             ETY +LLD++V+AGRLEDTWS+I EMK KGF LNS VYSKVI IY++NGMWKKA+ +V
Sbjct: 184 NQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIV 243

Query: 36  QQMREMGVPLDR 1
            ++R+ G+ +D+
Sbjct: 244 DEIRKSGISMDK 255



 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 40/175 (22%), Positives = 82/175 (46%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E++S +Y+ +I  Y   G   KA+ ++  +   G+      Y+ +ID FG  G+  EA  
Sbjct: 217 ELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALE 276

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           VF+ M+   + P    +N L++   + G L  A  +  +M++ G+    + ++ L+ F  
Sbjct: 277 VFKRMQQDDVVPDITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLS 336

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
             G+ +     +  MK +G   +  VY  ++ IY   G ++     +  ++  G+
Sbjct: 337 EQGKWDVIKQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDGEKCISALKSAGL 391


>ref|XP_008453831.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Cucumis melo]
           gi|659107737|ref|XP_008453832.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Cucumis melo]
           gi|659107739|ref|XP_008453833.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Cucumis melo]
          Length = 519

 Score =  226 bits (576), Expect = 2e-56
 Identities = 127/252 (50%), Positives = 170/252 (67%), Gaps = 7/252 (2%)
 Frame = -2

Query: 735 SYRGRSDGILRVEASKTAFDAIWGNDGEIALVGFRRDLKIEKSSGKLNPVPKQLIDD--- 565
           S+ G SD +L  ++SK  FD I+  DG I L  FR +         LN   K  +DD   
Sbjct: 16  SFGGFSDHLLHRDSSK--FDGIYTFDGAI-LKFFRNNF--------LNLASKAAVDDNCI 64

Query: 564 ----YNNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLID 397
               ++  +D+  E+SSE  N LI  YC  G++D AM L+AHME++G+H   ASY+YLI+
Sbjct: 65  VSSRWHGCIDEE-ELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYTYLIE 123

Query: 396 AFGSVGRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIER 217
           A G+VGRTLEAD++FQEM   G +P     N LLRGFLRKG L LA  VL+ M D+ I++
Sbjct: 124 ALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDLDIKK 183

Query: 216 TLETYMLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLV 37
             ETY +LLD++V+AGRLEDTWS+I EMK KGF LNS VYSKVI IY++NGMWKKA+ +V
Sbjct: 184 NQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIV 243

Query: 36  QQMREMGVPLDR 1
            ++R+ G+ +D+
Sbjct: 244 DEIRKSGISMDK 255



 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 40/175 (22%), Positives = 82/175 (46%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E++S +Y+ +I  Y   G   KA+ ++  +   G+      Y+ +ID FG  G+  EA  
Sbjct: 217 ELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALE 276

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           VF+ M+   + P    +N L++   + G L  A  +  +M++ G+    + ++ L+ F  
Sbjct: 277 VFKRMQQDDVVPDITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLS 336

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
             G+ +     +  MK +G   +  VY  ++ IY   G ++     +  ++  G+
Sbjct: 337 EQGKWDVIKQNLDSMKLRGHKNSVLVYEILVDIYGQYGQFQDGEKCISALKSAGL 391


>ref|XP_006850860.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Amborella trichopoda]
          Length = 492

 Score =  224 bits (571), Expect = 9e-56
 Identities = 109/194 (56%), Positives = 143/194 (73%)
 Frame = -2

Query: 582 KQLIDDYNNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYL 403
           KQL + Y N+  D  EV  +LYNNLI+AYC  GD+D  M L AHM A+GM P   SY+ L
Sbjct: 33  KQLYNSYENSTGDGFEVDYQLYNNLIQAYCKRGDVDIPMRLFAHMGAVGMQPAINSYACL 92

Query: 402 IDAFGSVGRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGI 223
           I+A G+VGRTLEAD +FQEMK LG +P  + YN LL+GFLRKG  +LA  VLMEM ++ I
Sbjct: 93  INALGTVGRTLEADAIFQEMKELGFRPRVRSYNALLKGFLRKGLFKLATKVLMEMEELDI 152

Query: 222 ERTLETYMLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMN 43
           +   ETYMLLL+ Y  +GRLEDTW ++ E+K +GF+ +S VYSK+I IYRD+GMWK A++
Sbjct: 153 DPNQETYMLLLESYARSGRLEDTWLILKEIKNEGFYASSYVYSKLIGIYRDHGMWKNALD 212

Query: 42  LVQQMREMGVPLDR 1
           L+++M++ GV  DR
Sbjct: 213 LLREMQDNGVSPDR 226



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 49/173 (28%), Positives = 79/173 (45%)
 Frame = -2

Query: 531 SSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVF 352
           SS +Y+ LI  Y   G    A+ L+  M+  G+ P    Y+ +ID FG  G+  EA   F
Sbjct: 190 SSYVYSKLIGIYRDHGMWKNALDLLREMQDNGVSPDRHVYNSVIDTFGKYGQLDEAVDAF 249

Query: 351 QEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHA 172
           ++MK+ G  P    +N L++   + G+L  A   L  M + G     + ++  +      
Sbjct: 250 EKMKHEGFSPDIMTWNSLIKWHCKAGELHQALKFLNRMLECGFYPDPKIFVTFISCLGEE 309

Query: 171 GRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
           G+  +       MK KGF  +  VY  ++ IY   G ++ A   V  MR  G+
Sbjct: 310 GKWREIRRAFEVMKLKGFKESGIVYGVLVDIYGQYGKFQDASECVSAMRAEGI 362



 Score = 65.5 bits (158), Expect = 7e-08
 Identities = 41/175 (23%), Positives = 79/175 (45%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           ++ + E Y  L+ +Y   G L+   L++  ++  G +  +  YS LI  +   G    A 
Sbjct: 152 IDPNQETYMLLLESYARSGRLEDTWLILKEIKNEGFYASSYVYSKLIGIYRDHGMWKNAL 211

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFY 181
            + +EM+  G+ P    YN ++  F + GQL  A     +M+  G    + T+  L+ ++
Sbjct: 212 DLLREMQDNGVSPDRHVYNSVIDTFGKYGQLDEAVDAFEKMKHEGFSPDIMTWNSLIKWH 271

Query: 180 VHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMG 16
             AG L      +  M   GF+ + +++   IS   + G W++     + M+  G
Sbjct: 272 CKAGELHQALKFLNRMLECGFYPDPKIFVTFISCLGEEGKWREIRRAFEVMKLKG 326


>ref|XP_008808808.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like, partial [Phoenix dactylifera]
          Length = 532

 Score =  223 bits (569), Expect = 1e-55
 Identities = 109/178 (61%), Positives = 141/178 (79%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E+S E Y+ LI+A+C+ G LD+++ L+A MEA G+ P AASY+ L+ A GSVGRTLEAD 
Sbjct: 84  ELSWESYDRLIQAHCSRGRLDRSLDLLARMEASGLRPSAASYARLVRALGSVGRTLEADA 143

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           VF+EMK+ GL+PG +D+N LLR FL KGQL+LA+ +L+EM + G+ R  ETY+LLLD YV
Sbjct: 144 VFREMKWAGLRPGLRDFNALLRAFLSKGQLRLADCLLVEMGEEGVRRNRETYLLLLDSYV 203

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            AGRLEDTW V+GEMK +G  L+SR YS+V+ +YRDNGMWKKAM LV +MRE+GV  D
Sbjct: 204 RAGRLEDTWWVLGEMKRRGIWLDSRAYSQVLRLYRDNGMWKKAMGLVAEMRELGVAPD 261



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 50/176 (28%), Positives = 90/176 (51%)
 Frame = -2

Query: 534 VSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVV 355
           + S  Y+ ++R Y   G   KAM L+A M  LG+ P    Y+ +I+ FG  G+  EA   
Sbjct: 225 LDSRAYSQVLRLYRDNGMWKKAMGLVAEMRELGVAPDGRIYNEIIETFGKHGQLDEAVEA 284

Query: 354 FQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVH 175
           F+ M+  GL+P    +N L+R   + G L  A     +M++ G+    + + +++     
Sbjct: 285 FETMQGEGLKPDIVTWNALIRWHCKAGHLDQALGFFAKMQEDGLYPDPKIFTIIISRLGE 344

Query: 174 AGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPL 7
            GR ++  ++   MKC+GF  +  +Y+ ++ IY   GM++ A   V  ++  G+ L
Sbjct: 345 QGRWDEIRNIFESMKCRGFRNSGIIYAVLVDIYGQYGMFQDAEECVAALKAQGLQL 400



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 40/170 (23%), Positives = 83/170 (48%)
 Frame = -2

Query: 525 ELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQE 346
           E Y  L+ +Y   G L+    ++  M+  G+   + +YS ++  +   G   +A  +  E
Sbjct: 193 ETYLLLLDSYVRAGRLEDTWWVLGEMKRRGIWLDSRAYSQVLRLYRDNGMWKKAMGLVAE 252

Query: 345 MKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGR 166
           M+ LG+ P  + YN ++  F + GQL  A      M+  G++  + T+  L+ ++  AG 
Sbjct: 253 MRELGVAPDGRIYNEIIETFGKHGQLDEAVEAFETMQGEGLKPDIVTWNALIRWHCKAGH 312

Query: 165 LEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMG 16
           L+       +M+  G + + ++++ +IS   + G W +  N+ + M+  G
Sbjct: 313 LDQALGFFAKMQEDGLYPDPKIFTIIISRLGEQGRWDEIRNIFESMKCRG 362



 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 33/105 (31%), Positives = 55/105 (52%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           L++S+ ++  L  AY   G  ++ + ++  MEA G+ P     + LI+AFG  GR LEA 
Sbjct: 398 LQLSASVFCVLANAYAQLGLWEQTIKVLRMMEAEGIEPNLIMLNLLINAFGIAGRHLEAL 457

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG 226
            VF+ +K  G+ P    Y+ L++ F+R  +      +  EM   G
Sbjct: 458 AVFEHIKESGISPDVVTYSTLMKAFMRAKKYDQVPVIYKEMECAG 502


>ref|XP_009397509.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 489

 Score =  220 bits (560), Expect = 2e-54
 Identities = 110/195 (56%), Positives = 146/195 (74%)
 Frame = -2

Query: 588 VPKQLIDDYNNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYS 409
           VPK  +DD     +++ E+S E YN LI+++C +G LD+++ L++ MEA GM P  A Y+
Sbjct: 46  VPKDHLDDGVGRENEKEELSRESYNALIQSHCAKGRLDRSLHLLSRMEAAGMRPSTACYA 105

Query: 408 YLIDAFGSVGRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDI 229
            L+ A G  GRTLEAD VF+EMK+ G +  +K+YN LL GFLRKGQL +A+ +L+EM   
Sbjct: 106 RLVYALGRTGRTLEADAVFREMKWSGHRLTSKEYNALLGGFLRKGQLLMADRLLVEMGKE 165

Query: 228 GIERTLETYMLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKA 49
           GI+R  ETY+LLLD YVH+GRLEDTW V+GEMK KGF L+S VYSK+I +YRDNGMWKKA
Sbjct: 166 GIDRNRETYLLLLDSYVHSGRLEDTWWVLGEMKEKGFWLDSFVYSKIIRLYRDNGMWKKA 225

Query: 48  MNLVQQMREMGVPLD 4
           M+LV +M E+G+  D
Sbjct: 226 MSLVVEMHELGIEPD 240



 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 48/174 (27%), Positives = 88/174 (50%)
 Frame = -2

Query: 534 VSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVV 355
           + S +Y+ +IR Y   G   KAM L+  M  LG+ P    Y+ +ID FG  G+  EA  +
Sbjct: 204 LDSFVYSKIIRLYRDNGMWKKAMSLVVEMHELGIEPDVRMYNGMIDTFGKYGQLDEAVKI 263

Query: 354 FQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVH 175
           F++M+  GL+P    +N L+R   + G L+ A     +M++ G+    + ++ +++    
Sbjct: 264 FEKMQSTGLKPDIMTWNALIRWHCKAGDLKHALGFFAKMQEAGLYPDPKIFVNIINRLGE 323

Query: 174 AGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            GR ++   +   MK +G   +  +YS ++ IY   G +  A   V  ++  G+
Sbjct: 324 RGRWDEMKKLFEGMKYRGLRESGIIYSILVDIYGQYGTFHNAEECVAALKAEGM 377



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 47/171 (27%), Positives = 85/171 (49%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N LIR +C  GDL  A+   A M+  G++P    +  +I+  G  GR  E   +F+ MK
Sbjct: 279 WNALIRWHCKAGDLKHALGFFAKMQEAGLYPDPKIFVNIINRLGERGRWDEMKKLFEGMK 338

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
           Y GL+     Y+IL+  + + G    AE  +  ++  G++ +   Y +L + Y   G  E
Sbjct: 339 YRGLRESGIIYSILVDIYGQYGTFHNAEECVAALKAEGMQVSASIYCVLANAYAQQGLCE 398

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPL 7
            T  V+  M+  G   N  + + +++ +   G   +AM + + ++E  VP+
Sbjct: 399 QTLRVLQLMEADGIEPNLIMLNLLMNAFGIAGRHFEAMAVFEHIKE-SVPI 448



 Score = 66.2 bits (160), Expect = 4e-08
 Identities = 40/176 (22%), Positives = 85/176 (48%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           ++ + E Y  L+ +Y   G L+    ++  M+  G    +  YS +I  +   G   +A 
Sbjct: 167 IDRNRETYLLLLDSYVHSGRLEDTWWVLGEMKEKGFWLDSFVYSKIIRLYRDNGMWKKAM 226

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFY 181
            +  EM  LG++P  + YN ++  F + GQL  A  +  +M+  G++  + T+  L+ ++
Sbjct: 227 SLVVEMHELGIEPDVRMYNGMIDTFGKYGQLDEAVKIFEKMQSTGLKPDIMTWNALIRWH 286

Query: 180 VHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
             AG L+       +M+  G + + +++  +I+   + G W +   L + M+  G+
Sbjct: 287 CKAGDLKHALGFFAKMQEAGLYPDPKIFVNIINRLGERGRWDEMKKLFEGMKYRGL 342



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 43/174 (24%), Positives = 86/174 (49%)
 Frame = -2

Query: 534 VSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVV 355
           ++S+ YN L+  +  +G L  A  L+  M   G+     +Y  L+D++   GR  +   V
Sbjct: 134 LTSKEYNALLGGFLRKGQLLMADRLLVEMGKEGIDRNRETYLLLLDSYVHSGRLEDTWWV 193

Query: 354 FQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVH 175
             EMK  G    +  Y+ ++R +   G  + A S+++EM ++GIE  +  Y  ++D +  
Sbjct: 194 LGEMKEKGFWLDSFVYSKIIRLYRDNGMWKKAMSLVVEMHELGIEPDVRMYNGMIDTFGK 253

Query: 174 AGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            G+L++   +  +M+  G   +   ++ +I  +   G  K A+    +M+E G+
Sbjct: 254 YGQLDEAVKIFEKMQSTGLKPDIMTWNALIRWHCKAGDLKHALGFFAKMQEAGL 307


>ref|XP_009397497.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 513

 Score =  220 bits (560), Expect = 2e-54
 Identities = 110/195 (56%), Positives = 146/195 (74%)
 Frame = -2

Query: 588 VPKQLIDDYNNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYS 409
           VPK  +DD     +++ E+S E YN LI+++C +G LD+++ L++ MEA GM P  A Y+
Sbjct: 46  VPKDHLDDGVGRENEKEELSRESYNALIQSHCAKGRLDRSLHLLSRMEAAGMRPSTACYA 105

Query: 408 YLIDAFGSVGRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDI 229
            L+ A G  GRTLEAD VF+EMK+ G +  +K+YN LL GFLRKGQL +A+ +L+EM   
Sbjct: 106 RLVYALGRTGRTLEADAVFREMKWSGHRLTSKEYNALLGGFLRKGQLLMADRLLVEMGKE 165

Query: 228 GIERTLETYMLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKA 49
           GI+R  ETY+LLLD YVH+GRLEDTW V+GEMK KGF L+S VYSK+I +YRDNGMWKKA
Sbjct: 166 GIDRNRETYLLLLDSYVHSGRLEDTWWVLGEMKEKGFWLDSFVYSKIIRLYRDNGMWKKA 225

Query: 48  MNLVQQMREMGVPLD 4
           M+LV +M E+G+  D
Sbjct: 226 MSLVVEMHELGIEPD 240



 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 48/174 (27%), Positives = 88/174 (50%)
 Frame = -2

Query: 534 VSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVV 355
           + S +Y+ +IR Y   G   KAM L+  M  LG+ P    Y+ +ID FG  G+  EA  +
Sbjct: 204 LDSFVYSKIIRLYRDNGMWKKAMSLVVEMHELGIEPDVRMYNGMIDTFGKYGQLDEAVKI 263

Query: 354 FQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVH 175
           F++M+  GL+P    +N L+R   + G L+ A     +M++ G+    + ++ +++    
Sbjct: 264 FEKMQSTGLKPDIMTWNALIRWHCKAGDLKHALGFFAKMQEAGLYPDPKIFVNIINRLGE 323

Query: 174 AGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            GR ++   +   MK +G   +  +YS ++ IY   G +  A   V  ++  G+
Sbjct: 324 RGRWDEMKKLFEGMKYRGLRESGIIYSILVDIYGQYGTFHNAEECVAALKAEGM 377



 Score = 75.1 bits (183), Expect = 9e-11
 Identities = 47/172 (27%), Positives = 85/172 (49%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N LIR +C  GDL  A+   A M+  G++P    +  +I+  G  GR  E   +F+ MK
Sbjct: 279 WNALIRWHCKAGDLKHALGFFAKMQEAGLYPDPKIFVNIINRLGERGRWDEMKKLFEGMK 338

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
           Y GL+     Y+IL+  + + G    AE  +  ++  G++ +   Y +L + Y   G  E
Sbjct: 339 YRGLRESGIIYSILVDIYGQYGTFHNAEECVAALKAEGMQVSASIYCVLANAYAQQGLCE 398

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            T  V+  M+  G   N  + + +++ +   G   +AM + + ++E G+  D
Sbjct: 399 QTLRVLQLMEADGIEPNLIMLNLLMNAFGIAGRHFEAMAVFEHIKESGISPD 450



 Score = 66.2 bits (160), Expect = 4e-08
 Identities = 40/176 (22%), Positives = 85/176 (48%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           ++ + E Y  L+ +Y   G L+    ++  M+  G    +  YS +I  +   G   +A 
Sbjct: 167 IDRNRETYLLLLDSYVHSGRLEDTWWVLGEMKEKGFWLDSFVYSKIIRLYRDNGMWKKAM 226

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFY 181
            +  EM  LG++P  + YN ++  F + GQL  A  +  +M+  G++  + T+  L+ ++
Sbjct: 227 SLVVEMHELGIEPDVRMYNGMIDTFGKYGQLDEAVKIFEKMQSTGLKPDIMTWNALIRWH 286

Query: 180 VHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
             AG L+       +M+  G + + +++  +I+   + G W +   L + M+  G+
Sbjct: 287 CKAGDLKHALGFFAKMQEAGLYPDPKIFVNIINRLGERGRWDEMKKLFEGMKYRGL 342



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 43/174 (24%), Positives = 86/174 (49%)
 Frame = -2

Query: 534 VSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVV 355
           ++S+ YN L+  +  +G L  A  L+  M   G+     +Y  L+D++   GR  +   V
Sbjct: 134 LTSKEYNALLGGFLRKGQLLMADRLLVEMGKEGIDRNRETYLLLLDSYVHSGRLEDTWWV 193

Query: 354 FQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVH 175
             EMK  G    +  Y+ ++R +   G  + A S+++EM ++GIE  +  Y  ++D +  
Sbjct: 194 LGEMKEKGFWLDSFVYSKIIRLYRDNGMWKKAMSLVVEMHELGIEPDVRMYNGMIDTFGK 253

Query: 174 AGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            G+L++   +  +M+  G   +   ++ +I  +   G  K A+    +M+E G+
Sbjct: 254 YGQLDEAVKIFEKMQSTGLKPDIMTWNALIRWHCKAGDLKHALGFFAKMQEAGL 307



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 32/105 (30%), Positives = 55/105 (52%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           ++VS+ +Y  L  AY  +G  ++ + ++  MEA G+ P     + L++AFG  GR  EA 
Sbjct: 377 MQVSASIYCVLANAYAQQGLCEQTLRVLQLMEADGIEPNLIMLNLLMNAFGIAGRHFEAM 436

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG 226
            VF+ +K  G+ P    Y  L++ F+R  + +    +  EM   G
Sbjct: 437 AVFEHIKESGISPDVVTYCTLMKAFMRGKKYEQVPIIYKEMEHAG 481


>ref|XP_012459106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X4 [Gossypium raimondii]
          Length = 485

 Score =  219 bits (559), Expect = 2e-54
 Identities = 105/179 (58%), Positives = 136/179 (75%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E+S+EL+N  I+ YC  GD+D AM L+A +EA+G HP + SY +LID+ GSVGRTLEADV
Sbjct: 42  ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 101

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM YLG +P  + +N LL+GFL+KG L LA   L+EM  +G+ +  ETY +LLD+YV
Sbjct: 102 LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 161

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
            AGRLEDTW V+ EMK  G  L+S VY KVI +YRDNGMWKKA+ LV+++RE G+ LDR
Sbjct: 162 SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 220



 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 46/172 (26%), Positives = 84/172 (48%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N+LIR +C  GDL KA+ L   M+  G++P       LI   G +G+       F+ M 
Sbjct: 258 WNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMT 317

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
             G Q     Y +L+  + + G+ Q AE  +  ++  G   +   + +L + Y   G  E
Sbjct: 318 CRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCE 377

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            T  V+  M+ +G  LN  + + +I+ +   G  ++A+++ Q ++E G+  D
Sbjct: 378 QTVKVLQLMEAEGIELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPD 429



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N    + +++SS +Y  +IR Y   G   KA+ L+  +   G+      Y+ +ID FG  
Sbjct: 174 NEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKY 233

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG-------- 226
           G   EA  VF++MK   + P    +N L+R   + G L  A  +  EM++ G        
Sbjct: 234 GELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKIL 293

Query: 225 ---------------IERTLET------------YMLLLDFYVHAGRLEDTWSVIGEMKC 127
                          I++  E             Y +L+D Y   GR +D    I  +K 
Sbjct: 294 MSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKS 353

Query: 126 KGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
           +GF  ++ ++  + + Y   G  ++ + ++Q M   G+ L+
Sbjct: 354 EGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELN 394



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 43/170 (25%), Positives = 84/170 (49%)
 Frame = -2

Query: 522 LYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEM 343
           L+N L++ +  +G L  A+  +  M+ +G+     +Y  L+D + S GR  +  +V  EM
Sbjct: 117 LFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYVSAGRLEDTWMVVNEM 176

Query: 342 KYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRL 163
           K  G+Q  +  Y  ++R +   G  + A  ++ E+R+ GI    + Y  ++D +   G L
Sbjct: 177 KTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKYGEL 236

Query: 162 EDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            +   V  +MK +    +   ++ +I  +   G   KA+ L  +M+E G+
Sbjct: 237 GEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGL 286


>ref|XP_012459104.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X3 [Gossypium raimondii]
           gi|823252980|ref|XP_012459105.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X3 [Gossypium raimondii]
          Length = 490

 Score =  219 bits (559), Expect = 2e-54
 Identities = 105/179 (58%), Positives = 136/179 (75%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E+S+EL+N  I+ YC  GD+D AM L+A +EA+G HP + SY +LID+ GSVGRTLEADV
Sbjct: 47  ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 106

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM YLG +P  + +N LL+GFL+KG L LA   L+EM  +G+ +  ETY +LLD+YV
Sbjct: 107 LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 166

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
            AGRLEDTW V+ EMK  G  L+S VY KVI +YRDNGMWKKA+ LV+++RE G+ LDR
Sbjct: 167 SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 225



 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 46/172 (26%), Positives = 84/172 (48%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N+LIR +C  GDL KA+ L   M+  G++P       LI   G +G+       F+ M 
Sbjct: 263 WNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMT 322

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
             G Q     Y +L+  + + G+ Q AE  +  ++  G   +   + +L + Y   G  E
Sbjct: 323 CRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCE 382

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            T  V+  M+ +G  LN  + + +I+ +   G  ++A+++ Q ++E G+  D
Sbjct: 383 QTVKVLQLMEAEGIELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPD 434



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N    + +++SS +Y  +IR Y   G   KA+ L+  +   G+      Y+ +ID FG  
Sbjct: 179 NEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKY 238

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG-------- 226
           G   EA  VF++MK   + P    +N L+R   + G L  A  +  EM++ G        
Sbjct: 239 GELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKIL 298

Query: 225 ---------------IERTLET------------YMLLLDFYVHAGRLEDTWSVIGEMKC 127
                          I++  E             Y +L+D Y   GR +D    I  +K 
Sbjct: 299 MSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKS 358

Query: 126 KGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
           +GF  ++ ++  + + Y   G  ++ + ++Q M   G+ L+
Sbjct: 359 EGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELN 399



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 43/170 (25%), Positives = 84/170 (49%)
 Frame = -2

Query: 522 LYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEM 343
           L+N L++ +  +G L  A+  +  M+ +G+     +Y  L+D + S GR  +  +V  EM
Sbjct: 122 LFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYVSAGRLEDTWMVVNEM 181

Query: 342 KYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRL 163
           K  G+Q  +  Y  ++R +   G  + A  ++ E+R+ GI    + Y  ++D +   G L
Sbjct: 182 KTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKYGEL 241

Query: 162 EDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            +   V  +MK +    +   ++ +I  +   G   KA+ L  +M+E G+
Sbjct: 242 GEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGL 291


>gb|KJB76398.1| hypothetical protein B456_012G086600 [Gossypium raimondii]
          Length = 487

 Score =  219 bits (559), Expect = 2e-54
 Identities = 105/179 (58%), Positives = 136/179 (75%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E+S+EL+N  I+ YC  GD+D AM L+A +EA+G HP + SY +LID+ GSVGRTLEADV
Sbjct: 47  ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 106

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM YLG +P  + +N LL+GFL+KG L LA   L+EM  +G+ +  ETY +LLD+YV
Sbjct: 107 LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 166

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
            AGRLEDTW V+ EMK  G  L+S VY KVI +YRDNGMWKKA+ LV+++RE G+ LDR
Sbjct: 167 SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 225



 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 46/172 (26%), Positives = 84/172 (48%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N+LIR +C  GDL KA+ L   M+  G++P       LI   G +G+       F+ M 
Sbjct: 263 WNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMT 322

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
             G Q     Y +L+  + + G+ Q AE  +  ++  G   +   + +L + Y   G  E
Sbjct: 323 CRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCE 382

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            T  V+  M+ +G  LN  + + +I+ +   G  ++A+++ Q ++E G+  D
Sbjct: 383 QTVKVLQLMEAEGIELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPD 434



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N    + +++SS +Y  +IR Y   G   KA+ L+  +   G+      Y+ +ID FG  
Sbjct: 179 NEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKY 238

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG-------- 226
           G   EA  VF++MK   + P    +N L+R   + G L  A  +  EM++ G        
Sbjct: 239 GELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKIL 298

Query: 225 ---------------IERTLET------------YMLLLDFYVHAGRLEDTWSVIGEMKC 127
                          I++  E             Y +L+D Y   GR +D    I  +K 
Sbjct: 299 MSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKS 358

Query: 126 KGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
           +GF  ++ ++  + + Y   G  ++ + ++Q M   G+ L+
Sbjct: 359 EGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELN 399



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 43/170 (25%), Positives = 84/170 (49%)
 Frame = -2

Query: 522 LYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEM 343
           L+N L++ +  +G L  A+  +  M+ +G+     +Y  L+D + S GR  +  +V  EM
Sbjct: 122 LFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYVSAGRLEDTWMVVNEM 181

Query: 342 KYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRL 163
           K  G+Q  +  Y  ++R +   G  + A  ++ E+R+ GI    + Y  ++D +   G L
Sbjct: 182 KTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKYGEL 241

Query: 162 EDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            +   V  +MK +    +   ++ +I  +   G   KA+ L  +M+E G+
Sbjct: 242 GEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGL 291


>gb|KJB76397.1| hypothetical protein B456_012G086600 [Gossypium raimondii]
          Length = 482

 Score =  219 bits (559), Expect = 2e-54
 Identities = 105/179 (58%), Positives = 136/179 (75%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E+S+EL+N  I+ YC  GD+D AM L+A +EA+G HP + SY +LID+ GSVGRTLEADV
Sbjct: 42  ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 101

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM YLG +P  + +N LL+GFL+KG L LA   L+EM  +G+ +  ETY +LLD+YV
Sbjct: 102 LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 161

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
            AGRLEDTW V+ EMK  G  L+S VY KVI +YRDNGMWKKA+ LV+++RE G+ LDR
Sbjct: 162 SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 220



 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 46/172 (26%), Positives = 84/172 (48%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N+LIR +C  GDL KA+ L   M+  G++P       LI   G +G+       F+ M 
Sbjct: 258 WNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMT 317

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
             G Q     Y +L+  + + G+ Q AE  +  ++  G   +   + +L + Y   G  E
Sbjct: 318 CRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCE 377

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            T  V+  M+ +G  LN  + + +I+ +   G  ++A+++ Q ++E G+  D
Sbjct: 378 QTVKVLQLMEAEGIELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPD 429



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N    + +++SS +Y  +IR Y   G   KA+ L+  +   G+      Y+ +ID FG  
Sbjct: 174 NEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKY 233

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG-------- 226
           G   EA  VF++MK   + P    +N L+R   + G L  A  +  EM++ G        
Sbjct: 234 GELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKIL 293

Query: 225 ---------------IERTLET------------YMLLLDFYVHAGRLEDTWSVIGEMKC 127
                          I++  E             Y +L+D Y   GR +D    I  +K 
Sbjct: 294 MSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKS 353

Query: 126 KGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
           +GF  ++ ++  + + Y   G  ++ + ++Q M   G+ L+
Sbjct: 354 EGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELN 394



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 43/170 (25%), Positives = 84/170 (49%)
 Frame = -2

Query: 522 LYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEM 343
           L+N L++ +  +G L  A+  +  M+ +G+     +Y  L+D + S GR  +  +V  EM
Sbjct: 117 LFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYVSAGRLEDTWMVVNEM 176

Query: 342 KYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRL 163
           K  G+Q  +  Y  ++R +   G  + A  ++ E+R+ GI    + Y  ++D +   G L
Sbjct: 177 KTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKYGEL 236

Query: 162 EDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            +   V  +MK +    +   ++ +I  +   G   KA+ L  +M+E G+
Sbjct: 237 GEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGL 286


>ref|XP_012459103.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X2 [Gossypium raimondii]
           gi|763809494|gb|KJB76396.1| hypothetical protein
           B456_012G086600 [Gossypium raimondii]
          Length = 511

 Score =  219 bits (559), Expect = 2e-54
 Identities = 105/179 (58%), Positives = 136/179 (75%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E+S+EL+N  I+ YC  GD+D AM L+A +EA+G HP + SY +LID+ GSVGRTLEADV
Sbjct: 71  ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 130

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM YLG +P  + +N LL+GFL+KG L LA   L+EM  +G+ +  ETY +LLD+YV
Sbjct: 131 LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 190

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
            AGRLEDTW V+ EMK  G  L+S VY KVI +YRDNGMWKKA+ LV+++RE G+ LDR
Sbjct: 191 SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249



 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 46/172 (26%), Positives = 84/172 (48%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N+LIR +C  GDL KA+ L   M+  G++P       LI   G +G+       F+ M 
Sbjct: 287 WNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMT 346

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
             G Q     Y +L+  + + G+ Q AE  +  ++  G   +   + +L + Y   G  E
Sbjct: 347 CRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCE 406

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            T  V+  M+ +G  LN  + + +I+ +   G  ++A+++ Q ++E G+  D
Sbjct: 407 QTVKVLQLMEAEGIELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPD 458



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N    + +++SS +Y  +IR Y   G   KA+ L+  +   G+      Y+ +ID FG  
Sbjct: 203 NEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKY 262

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG-------- 226
           G   EA  VF++MK   + P    +N L+R   + G L  A  +  EM++ G        
Sbjct: 263 GELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKIL 322

Query: 225 ---------------IERTLET------------YMLLLDFYVHAGRLEDTWSVIGEMKC 127
                          I++  E             Y +L+D Y   GR +D    I  +K 
Sbjct: 323 MSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKS 382

Query: 126 KGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
           +GF  ++ ++  + + Y   G  ++ + ++Q M   G+ L+
Sbjct: 383 EGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELN 423



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 43/170 (25%), Positives = 84/170 (49%)
 Frame = -2

Query: 522 LYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEM 343
           L+N L++ +  +G L  A+  +  M+ +G+     +Y  L+D + S GR  +  +V  EM
Sbjct: 146 LFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYVSAGRLEDTWMVVNEM 205

Query: 342 KYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRL 163
           K  G+Q  +  Y  ++R +   G  + A  ++ E+R+ GI    + Y  ++D +   G L
Sbjct: 206 KTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKYGEL 265

Query: 162 EDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            +   V  +MK +    +   ++ +I  +   G   KA+ L  +M+E G+
Sbjct: 266 GEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGL 315


>ref|XP_012459102.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like isoform X1 [Gossypium raimondii]
           gi|763809493|gb|KJB76395.1| hypothetical protein
           B456_012G086600 [Gossypium raimondii]
          Length = 514

 Score =  219 bits (559), Expect = 2e-54
 Identities = 105/179 (58%), Positives = 136/179 (75%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E+S+EL+N  I+ YC  GD+D AM L+A +EA+G HP + SY +LID+ GSVGRTLEADV
Sbjct: 71  ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 130

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM YLG +P  + +N LL+GFL+KG L LA   L+EM  +G+ +  ETY +LLD+YV
Sbjct: 131 LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 190

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
            AGRLEDTW V+ EMK  G  L+S VY KVI +YRDNGMWKKA+ LV+++RE G+ LDR
Sbjct: 191 SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249



 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 46/172 (26%), Positives = 84/172 (48%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N+LIR +C  GDL KA+ L   M+  G++P       LI   G +G+       F+ M 
Sbjct: 287 WNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMT 346

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
             G Q     Y +L+  + + G+ Q AE  +  ++  G   +   + +L + Y   G  E
Sbjct: 347 CRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCE 406

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            T  V+  M+ +G  LN  + + +I+ +   G  ++A+++ Q ++E G+  D
Sbjct: 407 QTVKVLQLMEAEGIELNIIMLNVLINAFGIAGRHEEALSIYQHIKESGISPD 458



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N    + +++SS +Y  +IR Y   G   KA+ L+  +   G+      Y+ +ID FG  
Sbjct: 203 NEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKY 262

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIG-------- 226
           G   EA  VF++MK   + P    +N L+R   + G L  A  +  EM++ G        
Sbjct: 263 GELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKIL 322

Query: 225 ---------------IERTLET------------YMLLLDFYVHAGRLEDTWSVIGEMKC 127
                          I++  E             Y +L+D Y   GR +D    I  +K 
Sbjct: 323 MSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRFQDAEDFISALKS 382

Query: 126 KGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
           +GF  ++ ++  + + Y   G  ++ + ++Q M   G+ L+
Sbjct: 383 EGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELN 423



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 43/170 (25%), Positives = 84/170 (49%)
 Frame = -2

Query: 522 LYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEM 343
           L+N L++ +  +G L  A+  +  M+ +G+     +Y  L+D + S GR  +  +V  EM
Sbjct: 146 LFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYVSAGRLEDTWMVVNEM 205

Query: 342 KYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRL 163
           K  G+Q  +  Y  ++R +   G  + A  ++ E+R+ GI    + Y  ++D +   G L
Sbjct: 206 KTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKYGEL 265

Query: 162 EDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            +   V  +MK +    +   ++ +I  +   G   KA+ L  +M+E G+
Sbjct: 266 GEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGL 315


>gb|KHG03831.1| hypothetical protein F383_26634 [Gossypium arboreum]
          Length = 511

 Score =  219 bits (559), Expect = 2e-54
 Identities = 105/179 (58%), Positives = 136/179 (75%)
 Frame = -2

Query: 537 EVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADV 358
           E+S+EL+N  I+ YC  GD+D AM L+A +EA+G HP + SY +LID+ GSVGRTLEADV
Sbjct: 71  ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 130

Query: 357 VFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYV 178
           +FQEM YLG +P  + +N LL+GFL+KG L LA   L+EM  +G+ +  ETY +LLD+YV
Sbjct: 131 LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 190

Query: 177 HAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLDR 1
            AGRLEDTW V+ EMK  G  L+S VY KVI +YRDNGMWKKA+ LV+++RE G+ LDR
Sbjct: 191 SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDR 249



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 48/172 (27%), Positives = 85/172 (49%)
 Frame = -2

Query: 519 YNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEMK 340
           +N+LIR +C  GDL KA+ L   M+  G++P       LI   G +G+       F+ MK
Sbjct: 287 WNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMK 346

Query: 339 YLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRLE 160
             G Q     Y +L+  + + G+ Q AE  +  ++  G   +   + +L + Y   G  E
Sbjct: 347 CRGRQEVGAIYAMLVDIYGQYGRFQDAEDFITALKSEGFLPSASMFCVLANAYAQQGFCE 406

Query: 159 DTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
            T  V+  M+ +G  LN  + + +I+ +   G  ++A+++ Q +RE G+  D
Sbjct: 407 QTVKVLQLMEAEGIELNIIMLNVLINAFGIAGRHEEALSIYQHIRESGISPD 458



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 47/182 (25%), Positives = 84/182 (46%)
 Frame = -2

Query: 561 NNALDDRLEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSV 382
           N    + +++SS +Y  +IR Y   G   KA+ L+  +   G+      Y+ +ID FG  
Sbjct: 203 NEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKY 262

Query: 381 GRTLEADVVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETY 202
           G   EA  VF++MK   + P    +N L+R   + G L  A  +  EM++ G+    +  
Sbjct: 263 GELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGLYPDPKIL 322

Query: 201 MLLLDFYVHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMRE 22
           M L+      G+ +        MKC+G      +Y+ ++ IY   G ++ A + +  ++ 
Sbjct: 323 MSLISRLGELGKWDVIKKNFENMKCRGRQEVGAIYAMLVDIYGQYGRFQDAEDFITALKS 382

Query: 21  MG 16
            G
Sbjct: 383 EG 384



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 43/170 (25%), Positives = 84/170 (49%)
 Frame = -2

Query: 522 LYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEADVVFQEM 343
           L+N L++ +  +G L  A+  +  M+ +G+     +Y  L+D + S GR  +  +V  EM
Sbjct: 146 LFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYVSAGRLEDTWMVVNEM 205

Query: 342 KYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFYVHAGRL 163
           K  G+Q  +  Y  ++R +   G  + A  ++ E+R+ GI    + Y  ++D +   G L
Sbjct: 206 KTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQIYNSIIDTFGKYGEL 265

Query: 162 EDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGV 13
            +   V  +MK +    +   ++ +I  +   G   KA+ L  +M+E G+
Sbjct: 266 GEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQLFTEMQEQGL 315



 Score = 62.0 bits (149), Expect = 8e-07
 Identities = 40/179 (22%), Positives = 83/179 (46%)
 Frame = -2

Query: 540 LEVSSELYNNLIRAYCTEGDLDKAMLLIAHMEALGMHPKAASYSYLIDAFGSVGRTLEAD 361
           + +  ++YN++I  +   G+L +A+ +   M+   + P   +++ LI      G   +A 
Sbjct: 245 ISLDRQIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKAL 304

Query: 360 VVFQEMKYLGLQPGAKDYNILLRGFLRKGQLQLAESVLMEMRDIGIERTLETYMLLLDFY 181
            +F EM+  GL P  K    L+      G+  + +     M+  G +     Y +L+D Y
Sbjct: 305 QLFTEMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMKCRGRQEVGAIYAMLVDIY 364

Query: 180 VHAGRLEDTWSVIGEMKCKGFHLNSRVYSKVISIYRDNGMWKKAMNLVQQMREMGVPLD 4
              GR +D    I  +K +GF  ++ ++  + + Y   G  ++ + ++Q M   G+ L+
Sbjct: 365 GQYGRFQDAEDFITALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELN 423