BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00014165
         (1848 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containi...   894   0.0  
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi...   889   0.0  
ref|XP_010037616.1| PREDICTED: pentatricopeptide repeat-containi...   867   0.0  
ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containi...   851   0.0  
ref|XP_010678652.1| PREDICTED: pentatricopeptide repeat-containi...   850   0.0  
ref|XP_010678651.1| PREDICTED: pentatricopeptide repeat-containi...   850   0.0  
gb|KEH31873.1| PPR containing plant-like protein [Medicago trunc...   848   0.0  
ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3...   847   0.0  
ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2...   847   0.0  
ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1...   847   0.0  
ref|XP_012080160.1| PREDICTED: pentatricopeptide repeat-containi...   845   0.0  
ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prun...   844   0.0  
ref|XP_008393129.1| PREDICTED: pentatricopeptide repeat-containi...   843   0.0  
ref|XP_012440460.1| PREDICTED: pentatricopeptide repeat-containi...   842   0.0  
ref|XP_010087734.1| hypothetical protein L484_008930 [Morus nota...   841   0.0  
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu...   841   0.0  
ref|XP_011071771.1| PREDICTED: pentatricopeptide repeat-containi...   839   0.0  
ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citr...   839   0.0  
ref|XP_009764932.1| PREDICTED: pentatricopeptide repeat-containi...   838   0.0  
ref|XP_006579551.1| PREDICTED: pentatricopeptide repeat-containi...   838   0.0  

>ref|XP_010272143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Nelumbo nucifera]
          Length = 878

 Score =  894 bits (2309), Expect = 0.0
 Identities = 431/539 (79%), Positives = 493/539 (91%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPKEL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF
Sbjct: 66   AKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 125

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+IGVLGREGLLDKC E+FDEMP HGV
Sbjct: 126  KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLDKCAEIFDEMPTHGV 185

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
            ARSVFSFTALINAYGRNGQ+Q +L+LL RM+  ERISP+ILTYNTVI++C+RGGL+WEGL
Sbjct: 186  ARSVFSFTALINAYGRNGQYQTSLELLERMKR-ERISPSILTYNTVINSCARGGLEWEGL 244

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLL AC +R LGDEAEM+FRTMNEAG+ PD+ T+TYLV+T
Sbjct: 245  LGLFAEMRHEGIQPDLVTYNTLLCACGSRGLGDEAEMIFRTMNEAGIVPDINTYTYLVET 304

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL +L++VS LL EM   G+ P+++SYNVLL+A+A  GS KEAM VFRQMQ AGC PN
Sbjct: 305  FGKLEKLEKVSNLLKEMESEGNVPDITSYNVLLEAYAHSGSIKEAMGVFRQMQSAGCMPN 364

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            AATY ILL+LY  HGRYDDVR+LFLEMKVS+TEPD +TYNILI+VFGEGGYF+EVVTLFN
Sbjct: 365  AATYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDASTYNILIQVFGEGGYFREVVTLFN 424

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENVEPNMETYEGLIFACGKGGL+EDA+ ILLHMN+KGVVPS KAYTGVVEAYG+AA
Sbjct: 425  DMVEENVEPNMETYEGLIFACGKGGLHEDAKRILLHMNEKGVVPSSKAYTGVVEAYGQAA 484

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGS PTV+TYNSL++TFA GGL+ ES+AI  ++ ESGV +N D+FN
Sbjct: 485  LYEEALVAFNTMHEVGSKPTVETYNSLLHTFARGGLYKESEAIMWQMGESGVARNRDSFN 544

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
             +IEAF QGGQFEAA+K+Y+EMEK RC+P+ERT+EA+L VYCSAGLVDES+E+F EI++
Sbjct: 545  SMIEAFGQGGQFEAAIKSYVEMEKARCDPDERTLEAVLRVYCSAGLVDESKEQFQEIKS 603



 Score =  132 bits (333), Expect = 7e-28
 Identities = 83/322 (25%), Positives = 155/322 (48%), Gaps = 2/322 (0%)
 Frame = -1

Query: 960  TMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDG 781
            T+ +   + DV T   L+     L     +++ LD   ++ S   ++ + ++ +  A+ G
Sbjct: 79   TVEKGKYSYDVET---LINKLSSLPPRGSIARCLDVFKNKLS---LNDFALVFKEFAQRG 132

Query: 780  STKEAMAVFRQMQGA-GCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATY 604
              + ++ +F+ MQ    C PN   Y I++ +    G  D   ++F EM        V ++
Sbjct: 133  DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLDKCAEIFDEMPTHGVARSVFSF 192

Query: 603  NILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIFACGKGGL-YEDARHILLHMN 427
              LI  +G  G ++  + L   M  E + P++ TY  +I +C +GGL +E    +   M 
Sbjct: 193  TALINAYGRNGQYQTSLELLERMKRERISPSILTYNTVINSCARGGLEWEGLLGLFAEMR 252

Query: 426  DKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFM 247
             +G+ P    Y  ++ A G   L +EA + F TM E G +P ++TY  L+ TF       
Sbjct: 253  HEGIQPDLVTYNTLLCACGSRGLGDEAEMIFRTMNEAGIVPDINTYTYLVETFGKLEKLE 312

Query: 246  ESQAIWLKLKESGVPKNTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALL 67
            +   +  +++  G   +  ++N L+EA++  G  + A+  + +M+   C PN  T   LL
Sbjct: 313  KVSNLLKEMESEGNVPDITSYNVLLEAYAHSGSIKEAMGVFRQMQSAGCMPNAATYSILL 372

Query: 66   HVYCSAGLVDESRERFMEIQAS 1
            ++Y   G  D+ RE F+E++ S
Sbjct: 373  NLYGRHGRYDDVRELFLEMKVS 394


>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Vitis vinifera]
          Length = 869

 Score =  889 bits (2296), Expect = 0.0
 Identities = 434/539 (80%), Positives = 491/539 (91%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF
Sbjct: 58   AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 117

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+IGVLGREGLL+KCQE+FDEMP HGV
Sbjct: 118  KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGV 177

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
            A SVFSFTALINAYGRNGQ++ +L+LL RM+  ER+SP+ILTYNTVI++C+RGGLDWE L
Sbjct: 178  APSVFSFTALINAYGRNGQYKSSLELLDRMKK-ERVSPSILTYNTVINSCARGGLDWEEL 236

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFA+MRH+GI  D+VTYNTLLSACA R LGDEAEMVFRTMNE G+ PD+TT++YLV+T
Sbjct: 237  LGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVET 296

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL RL++VS+LL EM   GS P+++SYNVLL+AHA+ GS KEAM VFRQMQGAGC PN
Sbjct: 297  FGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPN 356

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            AATY ILL+LY  HGRYDDVRDLFLEMKVS+TEP+ ATYNILI VFGEGGYFKEVVTLF+
Sbjct: 357  AATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFH 416

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENVEPNMETYEGLIFACGKGGL+EDA+ ILLHMN+KGVVPS KAYTGV+EAYG+AA
Sbjct: 417  DMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAA 476

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGS PTV+TYNSLI  FA GGL+ ES+AI LK+ +SGV +N DTFN
Sbjct: 477  LYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFN 536

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
            G+IEAF QGGQFE A+KAY+EMEK RC+P+E+T+EA+L VYC AGLV+ES E+F EI+A
Sbjct: 537  GVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKA 595


>ref|XP_010037616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Eucalyptus grandis]
            gi|629082906|gb|KCW49351.1| hypothetical protein
            EUGRSUZ_K02896 [Eucalyptus grandis]
          Length = 861

 Score =  867 bits (2241), Expect = 0.0
 Identities = 415/540 (76%), Positives = 490/540 (90%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDFALVF
Sbjct: 55   AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDMFKNKLSLNDFALVF 114

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLLDKC+E+FDEMP +GV
Sbjct: 115  KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCREIFDEMPSNGV 174

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
            +RSVFS+TALINAYGRNGQ++ +L+ LH+M+  ER+SP+ILTYNTVI+AC+RGGLDWEGL
Sbjct: 175  SRSVFSYTALINAYGRNGQYEVSLEFLHQMKK-ERVSPSILTYNTVINACARGGLDWEGL 233

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            L LFAEMRH+GI PD+VTYNTLLSAC+ R LGDEAEMVFRTMNE GV PD+TT++YLV+T
Sbjct: 234  LDLFAEMRHEGIQPDLVTYNTLLSACSNRGLGDEAEMVFRTMNEGGVIPDITTYSYLVET 293

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM   G+ P+++SYNVLL+A+A+ GS KE+M VFRQMQ AGC PN
Sbjct: 294  FGKLGKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQSGSIKESMDVFRQMQAAGCAPN 353

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            AATY ILL+ Y  HGRYDDVR+LFLEMKVS+TEPD ATYNILI+VFGEGGYFKEVVTLFN
Sbjct: 354  AATYSILLNQYGKHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGYFKEVVTLFN 413

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENVEPNMETYEGLI+ACG+GGLYED++ ILLHMN++G++PS K YTGV+EAYG+A+
Sbjct: 414  DMVEENVEPNMETYEGLIYACGRGGLYEDSKKILLHMNERGILPSSKVYTGVIEAYGQAS 473

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGS PTV+TYNSLI+TFA GGL+ E++ I  ++ +SGV +N D+FN
Sbjct: 474  LYEEALVAFNTMNEVGSKPTVETYNSLIHTFAKGGLYKEAEVILTRMGDSGVARNRDSFN 533

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
            G+IEAF QGGQFE A+K Y++M+K RCNP+ERT+EA+L VY  AGLVDES E+F EI++S
Sbjct: 534  GMIEAFRQGGQFEEAIKTYVDMDKVRCNPDERTLEAVLSVYRFAGLVDESEEQFKEIKSS 593



 Score =  120 bits (302), Expect = 3e-24
 Identities = 110/470 (23%), Positives = 188/470 (40%), Gaps = 39/470 (8%)
 Frame = -1

Query: 1563 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAHRGDWQRSLRLFKYM 1384
            YSY VET   KL  L     + + ++   N   +  + ++ + +A  G  + S+ +F+ M
Sbjct: 287  YSYLVETF-GKLGKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQSGSIKESMDVFRQM 345

Query: 1383 QRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGVARSVFSFTALINAYGRNGQ 1204
            Q    C PN   Y+I++   G+ G  D  +E+F EM          ++  LI  +G  G 
Sbjct: 346  QAA-GCAPNAATYSILLNQYGKHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 404

Query: 1203 HQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLD----------------------- 1093
             ++ + L + M   E + PN+ TY  +I+AC RGGL                        
Sbjct: 405  FKEVVTLFNDMVE-ENVEPNMETYEGLIYACGRGGLYEDSKKILLHMNERGILPSSKVYT 463

Query: 1092 -----------WEGLLGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEA 946
                       +E  L  F  M   G  P V TYN+L+   A   L  EAE++   M ++
Sbjct: 464  GVIEAYGQASLYEEALVAFNTMNEVGSKPTVETYNSLIHTFAKGGLYKEAEVILTRMGDS 523

Query: 945  GVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEA 766
            GVA +                                     S+N +++A  + G  +EA
Sbjct: 524  GVARN-----------------------------------RDSFNGMIEAFRQGGQFEEA 548

Query: 765  MAVFRQMQGAGCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEV 586
            +  +  M    C P+  T + +LS+Y   G  D+  + F E+K S   P V  Y +++ V
Sbjct: 549  IKTYVDMDKVRCNPDERTLEAVLSVYRFAGLVDESEEQFKEIKSSGILPSVMCYCMMVAV 608

Query: 585  FGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIFACGKGGLYEDA-----RHILLHMNDK 421
            + +   + +   L ++M   N   N+    G +    KG    DA      ++L  +N +
Sbjct: 609  YAKCDRWDDAYGLLDEMC-MNSGSNIHQVIGQMI---KGDYDHDANWQIVEYVLDKLNSE 664

Query: 420  GVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYT 271
            G     + Y  ++EA       E A    +   + G  P +   N L+++
Sbjct: 665  GCGLGNRFYNALLEALWWLGQKERAARVLSEATKRGLFPELFRKNKLVWS 714


>ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Cicer arietinum]
          Length = 861

 Score =  851 bits (2198), Expect = 0.0
 Identities = 410/540 (75%), Positives = 481/540 (89%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKP+EL+LGNPSVTVE GKYSYDVETLIN+LSSLPPRGSIARCLD FKNKLSLNDF++VF
Sbjct: 50   AKPRELILGNPSVTVESGKYSYDVETLINRLSSLPPRGSIARCLDSFKNKLSLNDFSVVF 109

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLLDKC+EVFDEMP  GV
Sbjct: 110  KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSQGV 169

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVF++TA+INAYGRNGQ Q +++LL RM+  ER+SP+ILTYNTVI+AC+RGGLDWEGL
Sbjct: 170  PRSVFAYTAVINAYGRNGQFQTSVELLDRMKQ-ERVSPSILTYNTVINACARGGLDWEGL 228

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PDV+TYNTLLSACA R LGDEAEMVFRTMNE GV PD+ T++YLV T
Sbjct: 229  LGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYLVHT 288

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL +L++VS+LL EM   G+ P+VSSYNVLL+A+A  GS K+A+ VFRQMQGAGC PN
Sbjct: 289  FGKLNKLEKVSELLREMESGGNLPDVSSYNVLLEAYAESGSIKDAIGVFRQMQGAGCVPN 348

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            AATY ILL+LY  HGRYDDVRDLFLEMKVS+T+PD  TYNILI+VFGEGGYFKEVVTLF+
Sbjct: 349  AATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFH 408

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMV+ENVEPNMETYEGLIFACGKGGLYEDA+ ILLHMN++GVVPS KAYTGV+EAYG+AA
Sbjct: 409  DMVDENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNERGVVPSSKAYTGVIEAYGQAA 468

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGS PTV+TYNSL+ +FA GGL+ E +AI  ++ ESG+P++  +FN
Sbjct: 469  LYEEALVAFNTMNEVGSNPTVETYNSLVRSFARGGLYKEVEAILFRMGESGLPRDVHSFN 528

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
            G+IEA  Q GQ+E A+KA++EMEK  C+ +E T+EA+L +YC+AGLVDES E+F EI+AS
Sbjct: 529  GVIEALRQAGQYEEAVKAHVEMEKANCDYDESTLEAVLSIYCAAGLVDESEEQFQEIKAS 588


>ref|XP_010678652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic isoform X2 [Beta vulgaris subsp. vulgaris]
            gi|870859005|gb|KMT10469.1| hypothetical protein
            BVRB_5g115940 isoform A [Beta vulgaris subsp. vulgaris]
          Length = 867

 Score =  850 bits (2197), Expect = 0.0
 Identities = 406/539 (75%), Positives = 482/539 (89%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPK+L+LGNPS+ VEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKLSLNDFALVF
Sbjct: 54   AKPKDLILGNPSIIVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLNDFALVF 113

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTIIIGVLGREGLL+KC EVFDEM  H +
Sbjct: 114  KEFAQRGDWQRSLRLFKYMQRQVWCKPNEHIYTIIIGVLGREGLLEKCHEVFDEMQVHSI 173

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVFS+TALIN+YGRNGQ++ AL+LL+RM+  ER++PNILTYNTVI++C+RGGLDWE L
Sbjct: 174  PRSVFSYTALINSYGRNGQYETALELLNRMKK-ERVAPNILTYNTVINSCARGGLDWEEL 232

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSACA+R LGDEAEMVFRTMNE+GV PD+TT++Y+V+T
Sbjct: 233  LGLFAEMRHEGIQPDIVTYNTLLSACASRGLGDEAEMVFRTMNESGVLPDITTYSYVVET 292

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL +L +V+ LL EM   G  P++SSYNVLL+A+A++GS KEAM VFRQMQ AGC PN
Sbjct: 293  FGKLDKLGKVTDLLKEMELSGKLPDISSYNVLLEAYAQEGSIKEAMGVFRQMQEAGCMPN 352

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A+TY ILL+LY   GRYDDVR+LFLEMKVS+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 353  ASTYSILLNLYGGKGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGYFKEVVTLFH 412

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENV PNMETYEGL+FACGKGGLY+DA+ IL HMN+KG+VPSPKAYTGV++AYG+A 
Sbjct: 413  DMVEENVNPNMETYEGLVFACGKGGLYQDAKEILSHMNEKGLVPSPKAYTGVIDAYGQAG 472

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGS P+V+TYNSLI+T+A GGL+ E +AI  ++ +SG+P+N D+FN
Sbjct: 473  LYEEALVAFNTMNEVGSRPSVETYNSLIHTYARGGLYKEVEAILSRMNDSGIPRNRDSFN 532

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
            G+IE F QGGQF+ A+ AY+EME   C+P+E+T+EA+L VYC AGLV+E+ E+F EI+A
Sbjct: 533  GVIEGFRQGGQFDDAINAYVEMENAGCDPDEQTLEAVLSVYCFAGLVEEAEEQFQEIKA 591



 Score =  142 bits (358), Expect = 9e-31
 Identities = 84/306 (27%), Positives = 156/306 (50%), Gaps = 2/306 (0%)
 Frame = -1

Query: 912 LVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQG-A 736
           L+     L     +++ LD   ++ S   ++ + ++ +  A+ G  + ++ +F+ MQ   
Sbjct: 80  LINKLSSLPPRGSIARCLDAFKNKLS---LNDFALVFKEFAQRGDWQRSLRLFKYMQRQV 136

Query: 735 GCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEV 556
            C PN   Y I++ +    G  +   ++F EM+V S    V +Y  LI  +G  G ++  
Sbjct: 137 WCKPNEHIYTIIIGVLGREGLLEKCHEVFDEMQVHSIPRSVFSYTALINSYGRNGQYETA 196

Query: 555 VTLFNDMVEENVEPNMETYEGLIFACGKGGL-YEDARHILLHMNDKGVVPSPKAYTGVVE 379
           + L N M +E V PN+ TY  +I +C +GGL +E+   +   M  +G+ P    Y  ++ 
Sbjct: 197 LELLNRMKKERVAPNILTYNTVINSCARGGLDWEELLGLFAEMRHEGIQPDIVTYNTLLS 256

Query: 378 AYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPK 199
           A     L +EA + F TM E G +P + TY+ ++ TF       +   +  +++ SG   
Sbjct: 257 ACASRGLGDEAEMVFRTMNESGVLPDITTYSYVVETFGKLDKLGKVTDLLKEMELSGKLP 316

Query: 198 NTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERF 19
           +  ++N L+EA++Q G  + A+  + +M++  C PN  T   LL++Y   G  D+ RE F
Sbjct: 317 DISSYNVLLEAYAQEGSIKEAMGVFRQMQEAGCMPNASTYSILLNLYGGKGRYDDVRELF 376

Query: 18  MEIQAS 1
           +E++ S
Sbjct: 377 LEMKVS 382


>ref|XP_010678651.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris]
            gi|870859006|gb|KMT10470.1| hypothetical protein
            BVRB_5g115940 isoform B [Beta vulgaris subsp. vulgaris]
          Length = 868

 Score =  850 bits (2197), Expect = 0.0
 Identities = 406/539 (75%), Positives = 482/539 (89%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPK+L+LGNPS+ VEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKLSLNDFALVF
Sbjct: 54   AKPKDLILGNPSIIVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLNDFALVF 113

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTIIIGVLGREGLL+KC EVFDEM  H +
Sbjct: 114  KEFAQRGDWQRSLRLFKYMQRQVWCKPNEHIYTIIIGVLGREGLLEKCHEVFDEMQVHSI 173

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVFS+TALIN+YGRNGQ++ AL+LL+RM+  ER++PNILTYNTVI++C+RGGLDWE L
Sbjct: 174  PRSVFSYTALINSYGRNGQYETALELLNRMKK-ERVAPNILTYNTVINSCARGGLDWEEL 232

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSACA+R LGDEAEMVFRTMNE+GV PD+TT++Y+V+T
Sbjct: 233  LGLFAEMRHEGIQPDIVTYNTLLSACASRGLGDEAEMVFRTMNESGVLPDITTYSYVVET 292

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL +L +V+ LL EM   G  P++SSYNVLL+A+A++GS KEAM VFRQMQ AGC PN
Sbjct: 293  FGKLDKLGKVTDLLKEMELSGKLPDISSYNVLLEAYAQEGSIKEAMGVFRQMQEAGCMPN 352

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A+TY ILL+LY   GRYDDVR+LFLEMKVS+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 353  ASTYSILLNLYGGKGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGYFKEVVTLFH 412

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENV PNMETYEGL+FACGKGGLY+DA+ IL HMN+KG+VPSPKAYTGV++AYG+A 
Sbjct: 413  DMVEENVNPNMETYEGLVFACGKGGLYQDAKEILSHMNEKGLVPSPKAYTGVIDAYGQAG 472

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGS P+V+TYNSLI+T+A GGL+ E +AI  ++ +SG+P+N D+FN
Sbjct: 473  LYEEALVAFNTMNEVGSRPSVETYNSLIHTYARGGLYKEVEAILSRMNDSGIPRNRDSFN 532

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
            G+IE F QGGQF+ A+ AY+EME   C+P+E+T+EA+L VYC AGLV+E+ E+F EI+A
Sbjct: 533  GVIEGFRQGGQFDDAINAYVEMENAGCDPDEQTLEAVLSVYCFAGLVEEAEEQFQEIKA 591



 Score =  142 bits (358), Expect = 9e-31
 Identities = 84/306 (27%), Positives = 156/306 (50%), Gaps = 2/306 (0%)
 Frame = -1

Query: 912 LVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQG-A 736
           L+     L     +++ LD   ++ S   ++ + ++ +  A+ G  + ++ +F+ MQ   
Sbjct: 80  LINKLSSLPPRGSIARCLDAFKNKLS---LNDFALVFKEFAQRGDWQRSLRLFKYMQRQV 136

Query: 735 GCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEV 556
            C PN   Y I++ +    G  +   ++F EM+V S    V +Y  LI  +G  G ++  
Sbjct: 137 WCKPNEHIYTIIIGVLGREGLLEKCHEVFDEMQVHSIPRSVFSYTALINSYGRNGQYETA 196

Query: 555 VTLFNDMVEENVEPNMETYEGLIFACGKGGL-YEDARHILLHMNDKGVVPSPKAYTGVVE 379
           + L N M +E V PN+ TY  +I +C +GGL +E+   +   M  +G+ P    Y  ++ 
Sbjct: 197 LELLNRMKKERVAPNILTYNTVINSCARGGLDWEELLGLFAEMRHEGIQPDIVTYNTLLS 256

Query: 378 AYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPK 199
           A     L +EA + F TM E G +P + TY+ ++ TF       +   +  +++ SG   
Sbjct: 257 ACASRGLGDEAEMVFRTMNESGVLPDITTYSYVVETFGKLDKLGKVTDLLKEMELSGKLP 316

Query: 198 NTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERF 19
           +  ++N L+EA++Q G  + A+  + +M++  C PN  T   LL++Y   G  D+ RE F
Sbjct: 317 DISSYNVLLEAYAQEGSIKEAMGVFRQMQEAGCMPNASTYSILLNLYGGKGRYDDVRELF 376

Query: 18  MEIQAS 1
           +E++ S
Sbjct: 377 LEMKVS 382


>gb|KEH31873.1| PPR containing plant-like protein [Medicago truncatula]
          Length = 862

 Score =  848 bits (2191), Expect = 0.0
 Identities = 408/540 (75%), Positives = 479/540 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKP+EL+LGNP+VTVE GKY+YDVETLIN+LSSLPPRGSIARCLD FKNKLSLNDFA+VF
Sbjct: 50   AKPRELILGNPTVTVETGKYTYDVETLINRLSSLPPRGSIARCLDSFKNKLSLNDFAVVF 109

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTIII +LGREGLLDKC+EVFDEMP  GV
Sbjct: 110  KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIITLLGREGLLDKCREVFDEMPSQGV 169

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
            ARSVF++TA+INAYGRNGQ Q +++LL  M+  ER+SP+ILTYNTVI+AC+RGGLDWEGL
Sbjct: 170  ARSVFAYTAVINAYGRNGQFQTSVELLESMKQ-ERVSPSILTYNTVINACARGGLDWEGL 228

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PDV+TYNTLLSACA R LGDEAEMVFRTMNE GV PD+ T++YLV T
Sbjct: 229  LGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYLVHT 288

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL +L++VS+LL EM   GS P+VSSYNVLL+A+A  G  KE++ VFRQMQ AGC PN
Sbjct: 289  FGKLNKLEKVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPN 348

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            +ATY ILL+LY  HGRYDDVRDLFLEMKVS+T+PD  TYNILI+VFGEGGYFKEVVTLF+
Sbjct: 349  SATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFH 408

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMV+EN+EPNMETYEGLIFACGKGGL+EDA+ ILLHMN+KG+VPS KAYTGV+EAYG+AA
Sbjct: 409  DMVDENIEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAA 468

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGS PTV+TYNSL+ +F+ GGL+ E +AI  ++ ESG+P++  +FN
Sbjct: 469  LYEEALVAFNTMNEVGSTPTVETYNSLVCSFSRGGLYKEVEAILFRMSESGLPRDVHSFN 528

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
            G+IEA  Q GQ+E A+KA++EMEK  C+PNE T EA+L +YCSAGLVDES E+F EI+AS
Sbjct: 529  GVIEALRQAGQYEEAVKAHVEMEKANCDPNESTFEAVLSIYCSAGLVDESEEQFQEIKAS 588


>ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3 [Theobroma cacao]
            gi|508773301|gb|EOY20557.1| Plastid transcriptionally
            active 2 isoform 3 [Theobroma cacao]
          Length = 811

 Score =  847 bits (2188), Expect = 0.0
 Identities = 407/539 (75%), Positives = 482/539 (89%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKP+ELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDFALVF
Sbjct: 48   AKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVF 107

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFAHRGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLL+KC+EVFDEMP  GV
Sbjct: 108  KEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGV 167

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVF++TALINAYGRNG +  +L+LL +M+  +++ P+ILTYNTVI+AC+RGGLDWEGL
Sbjct: 168  TRSVFAYTALINAYGRNGAYNISLELLDKMKK-DKVLPSILTYNTVINACARGGLDWEGL 226

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSACA R LG+EAEMVFRTMNE G+ PD+TT++YLV++
Sbjct: 227  LGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVES 286

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM   G+ P++ SYNVLL+A+A+ GS KEAM VF+QMQ AGC PN
Sbjct: 287  FGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPN 346

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL+LY  +GRYDDVR+LFLEMK S+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 347  ATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGYFKEVVTLFH 406

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEEN+EPN++TY+GLIFACGKGGL+EDA+ ILLHMN+K +VPS +AYTGV+EAYG+AA
Sbjct: 407  DMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHMNEKCIVPSSRAYTGVIEAYGQAA 466

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEE LVAFNTM EV S PT++TYNSL+ TFA GGL+ E+ AI  ++ E+GV KN D+FN
Sbjct: 467  LYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFN 526

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
             LIEAF QGGQFE A+KAY+EMEK RC+P+ERT+EA+L VYC AGLVDES E+F EI+A
Sbjct: 527  ALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKA 585



 Score =  169 bits (428), Expect = 7e-39
 Identities = 114/436 (26%), Positives = 204/436 (46%), Gaps = 5/436 (1%)
 Frame = -1

Query: 1563 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAHRGDWQRSLRLFKYM 1384
            YSY VE+   KL  L     + + ++   N   +  + ++ + +A  G  + ++ +FK M
Sbjct: 280  YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338

Query: 1383 QRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGVARSVFSFTALINAYGRNGQ 1204
            Q    C PN   Y+I++ + GR G  D  +E+F EM +        ++  LI  +G  G 
Sbjct: 339  Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397

Query: 1203 HQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGLLGLFAEMRHQGIIPDVVTY 1024
             ++ + L H M   E I PN+ TY+ +I AC +GGL  E    +   M  + I+P    Y
Sbjct: 398  FKEVVTLFHDMVE-ENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAY 455

Query: 1023 NTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMAD 844
              ++ A    AL +E  + F TMNE    P + T+  L+QTF + G  +  + +L  M +
Sbjct: 456  TGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNE 515

Query: 843  RGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPNAATYQILLSLYSSHGRYDD 664
             G      S+N L++A  + G  ++A+  + +M+ A C P+  T + +LS+Y   G  D+
Sbjct: 516  TGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDE 575

Query: 663  VRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIF 484
              + F E+K     P V  Y +++ V+ +   + +   LF++M+   V    +    +I 
Sbjct: 576  SNEQFQEIKALGVLPSVMCYCMMLAVYAKCDRWDDAYQLFDEMLTNKVSNIHQVIGKMI- 634

Query: 483  ACGKGGLYEDA-----RHILLHMNDKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQE 319
               +G   +DA      ++   +N +G     + Y  ++EA       E A    N   +
Sbjct: 635  ---RGDYDDDANWQMVEYVFDKLNSEGCGFGIRFYNALLEALWWLRQKERAARVLNEATK 691

Query: 318  VGSMPTVDTYNSLIYT 271
             G  P +   N L+++
Sbjct: 692  RGLFPELFRKNKLVWS 707



 Score =  132 bits (332), Expect = 9e-28
 Identities = 86/322 (26%), Positives = 156/322 (48%), Gaps = 2/322 (0%)
 Frame = -1

Query: 960  TMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDG 781
            T+ +   + DV T   L+     L     +++ LD   ++ S   ++ + ++ +  A  G
Sbjct: 61   TVEKGKYSYDVET---LINKLSSLPPRGSIARCLDVFRNKLS---LNDFALVFKEFAHRG 114

Query: 780  STKEAMAVFRQMQGA-GCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATY 604
              + ++ +F+ MQ    C PN   Y I++SL    G  +  R++F EM        V  Y
Sbjct: 115  DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAY 174

Query: 603  NILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIFACGKGGL-YEDARHILLHMN 427
              LI  +G  G +   + L + M ++ V P++ TY  +I AC +GGL +E    +   M 
Sbjct: 175  TALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMR 234

Query: 426  DKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFM 247
             +G+ P    Y  ++ A     L  EA + F TM E G +P + TY+ L+ +F   G   
Sbjct: 235  HEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLE 294

Query: 246  ESQAIWLKLKESGVPKNTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALL 67
            +   +  +++  G   +  ++N L+EA+++ G  + A+  + +M+   C PN  T   LL
Sbjct: 295  KVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPNATTYSILL 354

Query: 66   HVYCSAGLVDESRERFMEIQAS 1
            ++Y   G  D+ RE F+E++ S
Sbjct: 355  NLYGRNGRYDDVRELFLEMKES 376


>ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2 [Theobroma cacao]
            gi|508773300|gb|EOY20556.1| Plastid transcriptionally
            active 2 isoform 2 [Theobroma cacao]
          Length = 770

 Score =  847 bits (2188), Expect = 0.0
 Identities = 407/539 (75%), Positives = 482/539 (89%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKP+ELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDFALVF
Sbjct: 48   AKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVF 107

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFAHRGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLL+KC+EVFDEMP  GV
Sbjct: 108  KEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGV 167

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVF++TALINAYGRNG +  +L+LL +M+  +++ P+ILTYNTVI+AC+RGGLDWEGL
Sbjct: 168  TRSVFAYTALINAYGRNGAYNISLELLDKMKK-DKVLPSILTYNTVINACARGGLDWEGL 226

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSACA R LG+EAEMVFRTMNE G+ PD+TT++YLV++
Sbjct: 227  LGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVES 286

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM   G+ P++ SYNVLL+A+A+ GS KEAM VF+QMQ AGC PN
Sbjct: 287  FGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPN 346

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL+LY  +GRYDDVR+LFLEMK S+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 347  ATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGYFKEVVTLFH 406

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEEN+EPN++TY+GLIFACGKGGL+EDA+ ILLHMN+K +VPS +AYTGV+EAYG+AA
Sbjct: 407  DMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHMNEKCIVPSSRAYTGVIEAYGQAA 466

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEE LVAFNTM EV S PT++TYNSL+ TFA GGL+ E+ AI  ++ E+GV KN D+FN
Sbjct: 467  LYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFN 526

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
             LIEAF QGGQFE A+KAY+EMEK RC+P+ERT+EA+L VYC AGLVDES E+F EI+A
Sbjct: 527  ALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKA 585



 Score =  169 bits (428), Expect = 7e-39
 Identities = 114/436 (26%), Positives = 204/436 (46%), Gaps = 5/436 (1%)
 Frame = -1

Query: 1563 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAHRGDWQRSLRLFKYM 1384
            YSY VE+   KL  L     + + ++   N   +  + ++ + +A  G  + ++ +FK M
Sbjct: 280  YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338

Query: 1383 QRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGVARSVFSFTALINAYGRNGQ 1204
            Q    C PN   Y+I++ + GR G  D  +E+F EM +        ++  LI  +G  G 
Sbjct: 339  Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397

Query: 1203 HQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGLLGLFAEMRHQGIIPDVVTY 1024
             ++ + L H M   E I PN+ TY+ +I AC +GGL  E    +   M  + I+P    Y
Sbjct: 398  FKEVVTLFHDMVE-ENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAY 455

Query: 1023 NTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMAD 844
              ++ A    AL +E  + F TMNE    P + T+  L+QTF + G  +  + +L  M +
Sbjct: 456  TGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNE 515

Query: 843  RGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPNAATYQILLSLYSSHGRYDD 664
             G      S+N L++A  + G  ++A+  + +M+ A C P+  T + +LS+Y   G  D+
Sbjct: 516  TGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDE 575

Query: 663  VRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIF 484
              + F E+K     P V  Y +++ V+ +   + +   LF++M+   V    +    +I 
Sbjct: 576  SNEQFQEIKALGVLPSVMCYCMMLAVYAKCDRWDDAYQLFDEMLTNKVSNIHQVIGKMI- 634

Query: 483  ACGKGGLYEDA-----RHILLHMNDKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQE 319
               +G   +DA      ++   +N +G     + Y  ++EA       E A    N   +
Sbjct: 635  ---RGDYDDDANWQMVEYVFDKLNSEGCGFGIRFYNALLEALWWLRQKERAARVLNEATK 691

Query: 318  VGSMPTVDTYNSLIYT 271
             G  P +   N L+++
Sbjct: 692  RGLFPELFRKNKLVWS 707



 Score =  132 bits (332), Expect = 9e-28
 Identities = 86/322 (26%), Positives = 156/322 (48%), Gaps = 2/322 (0%)
 Frame = -1

Query: 960  TMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDG 781
            T+ +   + DV T   L+     L     +++ LD   ++ S   ++ + ++ +  A  G
Sbjct: 61   TVEKGKYSYDVET---LINKLSSLPPRGSIARCLDVFRNKLS---LNDFALVFKEFAHRG 114

Query: 780  STKEAMAVFRQMQGA-GCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATY 604
              + ++ +F+ MQ    C PN   Y I++SL    G  +  R++F EM        V  Y
Sbjct: 115  DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAY 174

Query: 603  NILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIFACGKGGL-YEDARHILLHMN 427
              LI  +G  G +   + L + M ++ V P++ TY  +I AC +GGL +E    +   M 
Sbjct: 175  TALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMR 234

Query: 426  DKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFM 247
             +G+ P    Y  ++ A     L  EA + F TM E G +P + TY+ L+ +F   G   
Sbjct: 235  HEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLE 294

Query: 246  ESQAIWLKLKESGVPKNTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALL 67
            +   +  +++  G   +  ++N L+EA+++ G  + A+  + +M+   C PN  T   LL
Sbjct: 295  KVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPNATTYSILL 354

Query: 66   HVYCSAGLVDESRERFMEIQAS 1
            ++Y   G  D+ RE F+E++ S
Sbjct: 355  NLYGRNGRYDDVRELFLEMKES 376


>ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
            gi|508773299|gb|EOY20555.1| Plastid transcriptionally
            active 2 isoform 1 [Theobroma cacao]
          Length = 859

 Score =  847 bits (2188), Expect = 0.0
 Identities = 407/539 (75%), Positives = 482/539 (89%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKP+ELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDFALVF
Sbjct: 48   AKPRELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVF 107

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFAHRGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLL+KC+EVFDEMP  GV
Sbjct: 108  KEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGV 167

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVF++TALINAYGRNG +  +L+LL +M+  +++ P+ILTYNTVI+AC+RGGLDWEGL
Sbjct: 168  TRSVFAYTALINAYGRNGAYNISLELLDKMKK-DKVLPSILTYNTVINACARGGLDWEGL 226

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSACA R LG+EAEMVFRTMNE G+ PD+TT++YLV++
Sbjct: 227  LGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVES 286

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM   G+ P++ SYNVLL+A+A+ GS KEAM VF+QMQ AGC PN
Sbjct: 287  FGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPN 346

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL+LY  +GRYDDVR+LFLEMK S+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 347  ATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGYFKEVVTLFH 406

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEEN+EPN++TY+GLIFACGKGGL+EDA+ ILLHMN+K +VPS +AYTGV+EAYG+AA
Sbjct: 407  DMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHMNEKCIVPSSRAYTGVIEAYGQAA 466

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEE LVAFNTM EV S PT++TYNSL+ TFA GGL+ E+ AI  ++ E+GV KN D+FN
Sbjct: 467  LYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFN 526

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
             LIEAF QGGQFE A+KAY+EMEK RC+P+ERT+EA+L VYC AGLVDES E+F EI+A
Sbjct: 527  ALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKA 585



 Score =  169 bits (428), Expect = 7e-39
 Identities = 114/436 (26%), Positives = 204/436 (46%), Gaps = 5/436 (1%)
 Frame = -1

Query: 1563 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAHRGDWQRSLRLFKYM 1384
            YSY VE+   KL  L     + + ++   N   +  + ++ + +A  G  + ++ +FK M
Sbjct: 280  YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338

Query: 1383 QRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGVARSVFSFTALINAYGRNGQ 1204
            Q    C PN   Y+I++ + GR G  D  +E+F EM +        ++  LI  +G  G 
Sbjct: 339  Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397

Query: 1203 HQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGLLGLFAEMRHQGIIPDVVTY 1024
             ++ + L H M   E I PN+ TY+ +I AC +GGL  E    +   M  + I+P    Y
Sbjct: 398  FKEVVTLFHDMVE-ENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAY 455

Query: 1023 NTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMAD 844
              ++ A    AL +E  + F TMNE    P + T+  L+QTF + G  +  + +L  M +
Sbjct: 456  TGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNE 515

Query: 843  RGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPNAATYQILLSLYSSHGRYDD 664
             G      S+N L++A  + G  ++A+  + +M+ A C P+  T + +LS+Y   G  D+
Sbjct: 516  TGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDE 575

Query: 663  VRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIF 484
              + F E+K     P V  Y +++ V+ +   + +   LF++M+   V    +    +I 
Sbjct: 576  SNEQFQEIKALGVLPSVMCYCMMLAVYAKCDRWDDAYQLFDEMLTNKVSNIHQVIGKMI- 634

Query: 483  ACGKGGLYEDA-----RHILLHMNDKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQE 319
               +G   +DA      ++   +N +G     + Y  ++EA       E A    N   +
Sbjct: 635  ---RGDYDDDANWQMVEYVFDKLNSEGCGFGIRFYNALLEALWWLRQKERAARVLNEATK 691

Query: 318  VGSMPTVDTYNSLIYT 271
             G  P +   N L+++
Sbjct: 692  RGLFPELFRKNKLVWS 707



 Score =  132 bits (332), Expect = 9e-28
 Identities = 86/322 (26%), Positives = 156/322 (48%), Gaps = 2/322 (0%)
 Frame = -1

Query: 960  TMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDG 781
            T+ +   + DV T   L+     L     +++ LD   ++ S   ++ + ++ +  A  G
Sbjct: 61   TVEKGKYSYDVET---LINKLSSLPPRGSIARCLDVFRNKLS---LNDFALVFKEFAHRG 114

Query: 780  STKEAMAVFRQMQGA-GCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATY 604
              + ++ +F+ MQ    C PN   Y I++SL    G  +  R++F EM        V  Y
Sbjct: 115  DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAY 174

Query: 603  NILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIFACGKGGL-YEDARHILLHMN 427
              LI  +G  G +   + L + M ++ V P++ TY  +I AC +GGL +E    +   M 
Sbjct: 175  TALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMR 234

Query: 426  DKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFM 247
             +G+ P    Y  ++ A     L  EA + F TM E G +P + TY+ L+ +F   G   
Sbjct: 235  HEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLE 294

Query: 246  ESQAIWLKLKESGVPKNTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALL 67
            +   +  +++  G   +  ++N L+EA+++ G  + A+  + +M+   C PN  T   LL
Sbjct: 295  KVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPNATTYSILL 354

Query: 66   HVYCSAGLVDESRERFMEIQAS 1
            ++Y   G  D+ RE F+E++ S
Sbjct: 355  NLYGRNGRYDDVRELFLEMKES 376


>ref|XP_012080160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Jatropha curcas]
            gi|643720904|gb|KDP31168.1| hypothetical protein
            JCGZ_11544 [Jatropha curcas]
          Length = 866

 Score =  845 bits (2183), Expect = 0.0
 Identities = 410/540 (75%), Positives = 480/540 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AK KELVLGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCL++FKNKLSLNDF+LVF
Sbjct: 58   AKSKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLEIFKNKLSLNDFSLVF 117

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLL+KC E+F+EMP HGV
Sbjct: 118  KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCAEIFEEMPTHGV 177

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVFS+TALIN+YGR+GQ++ +L+LL RMR  E++ P ILTYNTVI++C+RGGLDWEGL
Sbjct: 178  PRSVFSYTALINSYGRHGQYEVSLELLERMRK-EKVPPGILTYNTVINSCARGGLDWEGL 236

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            L LFAEMRH+GI PD+VTYNTLL+ACA R LGDEAEMVFRTMNE G+ PD+TT+  LV+T
Sbjct: 237  LSLFAEMRHEGIQPDIVTYNTLLNACADRGLGDEAEMVFRTMNEGGMVPDITTYRNLVET 296

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL +L++VSQLL EM   G+ PE+SSYNVLL+A+AR G+ K+AM VFRQMQ AGC PN
Sbjct: 297  FGKLEKLEKVSQLLKEMESSGNLPEISSYNVLLEAYARKGNIKDAMGVFRQMQEAGCVPN 356

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL+LY  HGRYDDVR+LFLEMKVS+TEPDVATYNILIEVFGEGGYFKEVVTLF+
Sbjct: 357  AVTYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDVATYNILIEVFGEGGYFKEVVTLFH 416

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENVEPNM TYEGLI+ACGKGGL+EDA+ ILLHM+++GVVPS KAYT V+EAYG+AA
Sbjct: 417  DMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEQGVVPSSKAYTSVIEAYGQAA 476

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LY+EALV FNTM E+GS PTVDTYNSLIY FA GGL+ ES+AI  K+ ESGV ++ ++FN
Sbjct: 477  LYDEALVMFNTMNEMGSKPTVDTYNSLIYMFARGGLYKESEAILWKMGESGVAQDRNSFN 536

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
            GLIE + QGGQFE A+KAY+EMEK R  P+ER++EA+L VYC+AGL+DES E+F EI+AS
Sbjct: 537  GLIEGYKQGGQFEEAIKAYVEMEKARFEPDERSLEAVLSVYCAAGLIDESEEQFREIRAS 596


>ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prunus persica]
            gi|462406104|gb|EMJ11568.1| hypothetical protein
            PRUPE_ppa001337mg [Prunus persica]
          Length = 850

 Score =  844 bits (2180), Expect = 0.0
 Identities = 403/540 (74%), Positives = 480/540 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            + PK+L+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDFALVF
Sbjct: 38   SSPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVF 97

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLLDKC EVFD+MP  GV
Sbjct: 98   KEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCSEVFDDMPSQGV 157

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVFS+TALINAYGRNGQ++ +L  L RM+  +++SP+ILTYNTV++AC+RGGL+WEGL
Sbjct: 158  VRSVFSYTALINAYGRNGQYETSLQFLDRMKK-DKVSPSILTYNTVLNACARGGLEWEGL 216

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSACA R LGDEAEMVFRTMNE G+ PD+TT+ YLV+T
Sbjct: 217  LGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYRYLVET 276

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL +L++VS+LL EM   G+ P+++SYNVLL+A+A+ GS +E+M VFRQMQ AGC PN
Sbjct: 277  FGKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQMQAAGCMPN 336

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            AATY ILL+LY  HGRYDDVR+LFLEMK+S+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 337  AATYSILLNLYGRHGRYDDVRELFLEMKISNTEPDPATYNILIQVFGEGGYFKEVVTLFH 396

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEEN+EPNMETYEGLI+ACGKGGL+EDA++ILLHM++KG+VPS KAYTGV+EAYG+AA
Sbjct: 397  DMVEENIEPNMETYEGLIYACGKGGLHEDAKNILLHMSEKGIVPSSKAYTGVIEAYGQAA 456

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LY+EALVAFNTM EVGS P+V++YNSLIY FA GGL+ E++A+   + E G  +N  TFN
Sbjct: 457  LYDEALVAFNTMNEVGSKPSVESYNSLIYAFARGGLYRETEAVLSIMGEVGAARNVHTFN 516

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
            G+IEAF QGGQFE A+KAY+EMEK RC+ +E T+EA+L VYC AGLV+E  E F E++AS
Sbjct: 517  GMIEAFRQGGQFEEAIKAYVEMEKRRCDHDEWTLEAVLSVYCVAGLVNECEEHFQEMKAS 576



 Score =  164 bits (414), Expect = 3e-37
 Identities = 118/456 (25%), Positives = 209/456 (45%), Gaps = 10/456 (2%)
 Frame = -1

Query: 1563 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAHRGDWQRSLRLFKYM 1384
            Y Y VET   KL  L     + + ++   N   +  + ++ + +A  G  + S+ +F+ M
Sbjct: 270  YRYLVETF-GKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQM 328

Query: 1383 QRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGVARSVFSFTALINAYGRNGQ 1204
            Q    C PN   Y+I++ + GR G  D  +E+F EM          ++  LI  +G  G 
Sbjct: 329  QAA-GCMPNAATYSILLNLYGRHGRYDDVRELFLEMKISNTEPDPATYNILIQVFGEGGY 387

Query: 1203 HQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGLLGLFAEMRHQGIIPDVVTY 1024
             ++ + L H M   E I PN+ TY  +I+AC +GGL  E    +   M  +GI+P    Y
Sbjct: 388  FKEVVTLFHDMVE-ENIEPNMETYEGLIYACGKGGLH-EDAKNILLHMSEKGIVPSSKAY 445

Query: 1023 NTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMAD 844
              ++ A    AL DEA + F TMNE G  P V ++  L+  F + G  +    +L  M +
Sbjct: 446  TGVIEAYGQAALYDEALVAFNTMNEVGSKPSVESYNSLIYAFARGGLYRETEAVLSIMGE 505

Query: 843  RGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPNAATYQILLSLYSSHGRYDD 664
             G+   V ++N +++A  + G  +EA+  + +M+   C  +  T + +LS+Y   G  ++
Sbjct: 506  VGAARNVHTFNGMIEAFRQGGQFEEAIKAYVEMEKRRCDHDEWTLEAVLSVYCVAGLVNE 565

Query: 663  VRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIF 484
              + F EMK S   P V  Y +++ V+     + +   L N+M+  N   N+    G + 
Sbjct: 566  CEEHFQEMKASGILPSVMCYCMMLAVYARNDRWDDANELLNEML-TNRASNIHQVIGQMI 624

Query: 483  ACGKGGLYEDA-----RHILLHMNDKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQE 319
               KG   +D+      ++   +  +G     + Y  ++EA       + A+   N   +
Sbjct: 625  ---KGDYDDDSNWQMVEYVFDKLKSEGCGLGMRFYNTLLEALWWLGQKQRAVRVLNEATQ 681

Query: 318  VGSMPTVDTYNSL-----IYTFAGGGLFMESQAIWL 226
             G  P +   N L     ++    GG +  + ++WL
Sbjct: 682  RGLFPELFRKNKLVGSVDVHRMWQGGAY-AAMSVWL 716


>ref|XP_008393129.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Malus domestica]
          Length = 1062

 Score =  843 bits (2177), Expect = 0.0
 Identities = 405/540 (75%), Positives = 479/540 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPK+L+LGNPSVT+EKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDFALVF
Sbjct: 250  AKPKDLILGNPSVTLEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVF 309

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLLDKC EVFDEMP  GV
Sbjct: 310  KEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCAEVFDEMPSQGV 369

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVFS+TALINAYGRNGQ++ +L+ L RM+  +++ P+ILTYNTV++AC+RGGLDWEGL
Sbjct: 370  VRSVFSYTALINAYGRNGQYETSLEFLDRMKK-DKVPPSILTYNTVLNACARGGLDWEGL 428

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSACA R LGDEAEMVFRTMNE G+ PD+TT+ YLV+T
Sbjct: 429  LGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDMTTYRYLVET 488

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL +L++VS+LL EM   G+ PE++SYNVLL+A+A  GS +E+M VFRQMQ AGC PN
Sbjct: 489  FGKLDKLEKVSELLKEMEAGGNLPEITSYNVLLEAYAELGSIRESMGVFRQMQAAGCMPN 548

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            AATY ILL+LY  HGRYDDVR+LFLEMKVS+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 549  AATYSILLNLYGRHGRYDDVRELFLEMKVSNTEPDAATYNILIQVFGEGGYFKEVVTLFH 608

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEE +EPNMETYEGLI+ACGKGGL+ED++ ILLHM++ G+VPS KAYTGV+EA G+AA
Sbjct: 609  DMVEEKIEPNMETYEGLIYACGKGGLHEDSKKILLHMHENGIVPSTKAYTGVIEACGQAA 668

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LY+EALVAFNTM EVGS P+V++YNSLIY FA GGL+ E++A+ L + ++GV +N  T N
Sbjct: 669  LYDEALVAFNTMNEVGSKPSVESYNSLIYAFARGGLYRETEAVLLIMGKAGVARNVHTVN 728

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
            G+IEAF QGGQFE A+KAY+EMEK RC+P+E T+EA+L VYC AGLV+E  E F EI+AS
Sbjct: 729  GMIEAFRQGGQFEEAIKAYVEMEKTRCDPDEWTLEAVLSVYCVAGLVNECEEHFQEIKAS 788


>ref|XP_012440460.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Gossypium raimondii]
            gi|763786173|gb|KJB53244.1| hypothetical protein
            B456_008G298300 [Gossypium raimondii]
          Length = 827

 Score =  842 bits (2176), Expect = 0.0
 Identities = 406/539 (75%), Positives = 479/539 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AK +E+VLGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVF+NKLSL DFALVF
Sbjct: 46   AKAREIVLGNPAVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFRNKLSLKDFALVF 105

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFAHRGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLLDKC+EVFDEMP  GV
Sbjct: 106  KEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCREVFDEMPSQGV 165

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVFS+TALINAYGRNG +  +L+LL +M+  +++ P+ILTYNTVI+AC+RGGLDWEGL
Sbjct: 166  PRSVFSYTALINAYGRNGAYDVSLELLAKMKK-DKVLPSILTYNTVINACARGGLDWEGL 224

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSACA R LG+EAEMVFR MNE G+ PD+TT++YLV+T
Sbjct: 225  LGLFAEMRHEGIQPDIVTYNTLLSACADRGLGNEAEMVFRNMNEGGILPDLTTYSYLVET 284

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM   G+ P++ SYNVLL+A+A  GS KEAM VFRQMQ AGC PN
Sbjct: 285  FGKLGKLEKVSELLKEMELGGNLPDIMSYNVLLEAYANSGSIKEAMGVFRQMQAAGCVPN 344

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL+LY  +GRYDDVR+LFLEMK S+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 345  AGTYSILLNLYGRNGRYDDVRELFLEMKASNTEPDAATYNILIQVFGEGGYFKEVVTLFH 404

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENVEPNM+TY+GLIFACGKGGL+EDA+ ILLHMN+KG+VPS +AYTGV+EAYG+AA
Sbjct: 405  DMVEENVEPNMKTYDGLIFACGKGGLHEDAKKILLHMNEKGIVPSSRAYTGVIEAYGQAA 464

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EV S PT++TYNSL+ TFA GGL  E++AI  ++ E+G+ K+ D+FN
Sbjct: 465  LYEEALVAFNTMNEVESKPTIETYNSLLQTFARGGLHKEAEAILSRMNEAGIAKSRDSFN 524

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
             LIEA+ QGGQFE A+KAY+EMEK RC+P+ERT+EA+L VYC AGL DES E+F EI+A
Sbjct: 525  ALIEAYRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLCDESNEQFKEIKA 583



 Score =  173 bits (439), Expect = 4e-40
 Identities = 119/453 (26%), Positives = 212/453 (46%), Gaps = 7/453 (1%)
 Frame = -1

Query: 1563 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAHRGDWQRSLRLFKYM 1384
            YSY VET   KL  L     + + +++  N   +  + ++ + +A+ G  + ++ +F+ M
Sbjct: 278  YSYLVETF-GKLGKLEKVSELLKEMELGGNLPDIMSYNVLLEAYANSGSIKEAMGVFRQM 336

Query: 1383 QRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGVARSVFSFTALINAYGRNGQ 1204
            Q    C PN   Y+I++ + GR G  D  +E+F EM          ++  LI  +G  G 
Sbjct: 337  QAA-GCVPNAGTYSILLNLYGRNGRYDDVRELFLEMKASNTEPDAATYNILIQVFGEGGY 395

Query: 1203 HQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGLLGLFAEMRHQGIIPDVVTY 1024
             ++ + L H M   E + PN+ TY+ +I AC +GGL  E    +   M  +GI+P    Y
Sbjct: 396  FKEVVTLFHDMVE-ENVEPNMKTYDGLIFACGKGGLH-EDAKKILLHMNEKGIVPSSRAY 453

Query: 1023 NTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMAD 844
              ++ A    AL +EA + F TMNE    P + T+  L+QTF + G  +    +L  M +
Sbjct: 454  TGVIEAYGQAALYEEALVAFNTMNEVESKPTIETYNSLLQTFARGGLHKEAEAILSRMNE 513

Query: 843  RGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPNAATYQILLSLYSSHGRYDD 664
             G      S+N L++A+ + G  ++A+  + +M+ A C P+  T + +LS+Y   G  D+
Sbjct: 514  AGIAKSRDSFNALIEAYRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLCDE 573

Query: 663  VRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIF 484
              + F E+K     P V +Y +++ V+ +   + +   L +DM+   V  N+    G + 
Sbjct: 574  SNEQFKEIKALGVLPSVTSYCMMLAVYAKCDRWDDAYKLLDDMLANKVS-NIHQVIGQMI 632

Query: 483  A--CGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQEVGS 310
                   G ++   +I   +N +G     + Y  ++E        E A        + G 
Sbjct: 633  RGDFDDDGNWQMVEYIFDKLNSEGYGFGIRFYNALLETLWWLGQKERAARVLKEATKRGL 692

Query: 309  MPTVDTYNSLIYT-----FAGGGLFMESQAIWL 226
             P +   N L+++        GG +  S +IWL
Sbjct: 693  FPELFRKNKLVFSVDVHRMWEGGTY-TSMSIWL 724



 Score =  131 bits (330), Expect = 2e-27
 Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 2/322 (0%)
 Frame = -1

Query: 960  TMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDG 781
            T+ +   + DV T   L+     L     +++ LD   ++ S   +  + ++ +  A  G
Sbjct: 59   TVEKGKYSYDVET---LINKLSSLPPRGSIARCLDVFRNKLS---LKDFALVFKEFAHRG 112

Query: 780  STKEAMAVFRQMQGA-GCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATY 604
              + ++ +F+ MQ    C PN   Y I++SL    G  D  R++F EM        V +Y
Sbjct: 113  DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCREVFDEMPSQGVPRSVFSY 172

Query: 603  NILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIFACGKGGL-YEDARHILLHMN 427
              LI  +G  G +   + L   M ++ V P++ TY  +I AC +GGL +E    +   M 
Sbjct: 173  TALINAYGRNGAYDVSLELLAKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMR 232

Query: 426  DKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFM 247
             +G+ P    Y  ++ A     L  EA + F  M E G +P + TY+ L+ TF   G   
Sbjct: 233  HEGIQPDIVTYNTLLSACADRGLGNEAEMVFRNMNEGGILPDLTTYSYLVETFGKLGKLE 292

Query: 246  ESQAIWLKLKESGVPKNTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALL 67
            +   +  +++  G   +  ++N L+EA++  G  + A+  + +M+   C PN  T   LL
Sbjct: 293  KVSELLKEMELGGNLPDIMSYNVLLEAYANSGSIKEAMGVFRQMQAAGCVPNAGTYSILL 352

Query: 66   HVYCSAGLVDESRERFMEIQAS 1
            ++Y   G  D+ RE F+E++AS
Sbjct: 353  NLYGRNGRYDDVRELFLEMKAS 374


>ref|XP_010087734.1| hypothetical protein L484_008930 [Morus notabilis]
            gi|587839092|gb|EXB29767.1| hypothetical protein
            L484_008930 [Morus notabilis]
          Length = 905

 Score =  841 bits (2173), Expect = 0.0
 Identities = 408/540 (75%), Positives = 473/540 (87%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPKE++LGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDFALVF
Sbjct: 70   AKPKEVILGNPAVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVF 129

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYTI+I +LGREGLLDK  E+FDEMP  GV
Sbjct: 130  KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKSAEIFDEMPSQGV 189

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             RSVFS+TALINAYGRNGQ++ +L LL RM+  +++SPNILTYNTVI+AC+RGGLDWEGL
Sbjct: 190  VRSVFSYTALINAYGRNGQYETSLQLLDRMKK-DKVSPNILTYNTVINACARGGLDWEGL 248

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLL ACA R LGDEAEMVFRTMNE G+ PD+TT++ LV+T
Sbjct: 249  LGLFAEMRHEGIQPDLVTYNTLLGACANRGLGDEAEMVFRTMNEGGIVPDITTYSCLVET 308

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM  RG+ P+++SYNVLL+A+A  GS  EA+ VFRQMQ AGC PN
Sbjct: 309  FGKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISEAVGVFRQMQTAGCLPN 368

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL+LY   GRY+DVR+LFLEMKVS+TEPD ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 369  ANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAATYNILIQVFGEGGYFKEVVTLFH 428

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENVEPNMETYEGLI ACGKGGL+ DA+ IL HMN+KG+VPS K YTGV+EAYG+AA
Sbjct: 429  DMVEENVEPNMETYEGLIIACGKGGLHGDAKIILNHMNEKGIVPSSKVYTGVIEAYGQAA 488

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGS P+V+TYNSLI+ F+ GGL+ E++AI  ++  S V +N D FN
Sbjct: 489  LYEEALVAFNTMNEVGSRPSVETYNSLIHAFSRGGLYKEAEAILQRMGNSAVARNVDLFN 548

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
             LIEAF QGGQ E A+KAY+EM K RC+P+ERT+EALL VYC AGLVDE  E F EI+AS
Sbjct: 549  SLIEAFRQGGQIEEAVKAYIEMGKSRCDPDERTLEALLSVYCFAGLVDECEEHFKEIKAS 608


>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
            gi|550322283|gb|EEF06266.2| hypothetical protein
            POPTR_0015s08030g [Populus trichocarpa]
          Length = 866

 Score =  841 bits (2173), Expect = 0.0
 Identities = 406/540 (75%), Positives = 477/540 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPKELVLGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF
Sbjct: 55   AKPKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 114

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFK+MQRQ+WCKPN+HIYTI+I +LGREGLL+KC ++F+EM  HGV
Sbjct: 115  KEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGV 174

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
            +RSVFS+TALIN+YGRNG+++ +L+LL RM+  ER+SP+ILTYNTVI++C+RGGLDWEGL
Sbjct: 175  SRSVFSYTALINSYGRNGKYEVSLELLERMKK-ERVSPSILTYNTVINSCARGGLDWEGL 233

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLL AC+ R LGDEAEMVFRTMNE GV PD+TT+TYLV T
Sbjct: 234  LGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDT 293

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL RL +VS+LL EMA  G+ PE+SSYNVLL+A+AR G+ ++A  VFR MQ AGC PN
Sbjct: 294  FGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPN 353

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL LY  HGRYD+VR+LFLEMKVS+TEPD ATYN LI+VFGEGGYFKEVVTLF+
Sbjct: 354  AETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFH 413

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DM EENVEPNMETYEGLIFACGKGGL++DA+ ILLHM++KG++PS KAYTGV+EAYG+AA
Sbjct: 414  DMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAA 473

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            +YEEALV  NTM E+GS PT++TYN+LIY FA GGL+ E++AI LK+ + GV +  D+FN
Sbjct: 474  MYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFN 533

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
            G+IE F QGGQFE A+KAY+EMEK R  P+ERT+EA+L VYC AGLVDES E+F EI+AS
Sbjct: 534  GVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKAS 593


>ref|XP_011071771.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Sesamum indicum]
          Length = 857

 Score =  839 bits (2168), Expect = 0.0
 Identities = 405/538 (75%), Positives = 476/538 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AK KEL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKLSL+DF+ VF
Sbjct: 51   AKTKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDAFKNKLSLSDFSHVF 110

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFAHRGDWQRSLRLFKYMQRQ+WCKPN+HIY++IIG+LGREGLLDK  E+FDEM  H V
Sbjct: 111  KEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYSLIIGILGREGLLDKSAEIFDEMVAHSV 170

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             R+V S+TA+INAYGRNGQ++ A++LL RM+ +ERI PNILTYNTVI+AC+RGG  WEGL
Sbjct: 171  PRTVLSYTAIINAYGRNGQYEAAIELLDRMK-MERILPNILTYNTVINACARGGYSWEGL 229

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            L LF EMRH+GI PD+VTYNTLLSAC+ R LGDEAEMVFRTMNE+GV PD+TT++YLV+T
Sbjct: 230  LSLFGEMRHEGIQPDLVTYNTLLSACSNRGLGDEAEMVFRTMNESGVLPDITTYSYLVET 289

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM   G+ PE+ SYNVLL+A+A  G  KEAM VFRQMQ AGC PN
Sbjct: 290  FGKLGKLEKVSELLAEMEAGGNLPEIMSYNVLLEAYAHSGKIKEAMGVFRQMQAAGCIPN 349

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL+L+  +GRYD+VR+LFLEMKVS+TEPD  TYNILIEVFGEGGYFKEVVTLF+
Sbjct: 350  AGTYSILLNLFGKNGRYDEVRELFLEMKVSNTEPDAETYNILIEVFGEGGYFKEVVTLFH 409

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENVEPNMETYEGLI+ACGKGGL+EDAR IL HMN+KG+VPS KAYTGV+EAYG+AA
Sbjct: 410  DMVEENVEPNMETYEGLIYACGKGGLHEDARRILFHMNEKGLVPSSKAYTGVIEAYGQAA 469

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EVGSMPT++T+NSLI+TFA GGL+ E++AI  ++ E GVP+N D+ N
Sbjct: 470  LYEEALVAFNTMTEVGSMPTIETFNSLIHTFAKGGLYKENEAILSRMGELGVPRNRDSLN 529

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQ 7
            G+IE + QGGQFE A+KAY++MEK RC+P+E T+EA+L VYC AGLVDES E+F EI+
Sbjct: 530  GVIEGYRQGGQFEEAIKAYVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFREIK 587



 Score =  135 bits (341), Expect = 8e-29
 Identities = 85/322 (26%), Positives = 155/322 (48%), Gaps = 2/322 (0%)
 Frame = -1

Query: 960  TMNEAGVAPDVTTHTYLVQTFGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDG 781
            T+ +   + DV T   L+     L     +++ LD   ++ S   +S ++ + +  A  G
Sbjct: 64   TVEKGKYSYDVET---LINKLSSLPPRGSIARCLDAFKNKLS---LSDFSHVFKEFAHRG 117

Query: 780  STKEAMAVFRQMQGA-GCPPNAATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATY 604
              + ++ +F+ MQ    C PN   Y +++ +    G  D   ++F EM   S    V +Y
Sbjct: 118  DWQRSLRLFKYMQRQIWCKPNEHIYSLIIGILGREGLLDKSAEIFDEMVAHSVPRTVLSY 177

Query: 603  NILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIFACGKGGL-YEDARHILLHMN 427
              +I  +G  G ++  + L + M  E + PN+ TY  +I AC +GG  +E    +   M 
Sbjct: 178  TAIINAYGRNGQYEAAIELLDRMKMERILPNILTYNTVINACARGGYSWEGLLSLFGEMR 237

Query: 426  DKGVVPSPKAYTGVVEAYGRAALYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFM 247
             +G+ P    Y  ++ A     L +EA + F TM E G +P + TY+ L+ TF   G   
Sbjct: 238  HEGIQPDLVTYNTLLSACSNRGLGDEAEMVFRTMNESGVLPDITTYSYLVETFGKLGKLE 297

Query: 246  ESQAIWLKLKESGVPKNTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALL 67
            +   +  +++  G      ++N L+EA++  G+ + A+  + +M+   C PN  T   LL
Sbjct: 298  KVSELLAEMEAGGNLPEIMSYNVLLEAYAHSGKIKEAMGVFRQMQAAGCIPNAGTYSILL 357

Query: 66   HVYCSAGLVDESRERFMEIQAS 1
            +++   G  DE RE F+E++ S
Sbjct: 358  NLFGKNGRYDEVRELFLEMKVS 379


>ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citrus clementina]
            gi|557541980|gb|ESR52958.1| hypothetical protein
            CICLE_v10018817mg [Citrus clementina]
          Length = 871

 Score =  839 bits (2168), Expect = 0.0
 Identities = 411/540 (76%), Positives = 478/540 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPKELVLG+P+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDFALVF
Sbjct: 59   AKPKELVLGSPTVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDMFKNKLSLNDFALVF 118

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKP++ IYTI+I +LGRE LLDK  EVF+EMP  GV
Sbjct: 119  KEFAQRGDWQRSLRLFKYMQRQIWCKPSEQIYTIMISLLGRENLLDKASEVFEEMPSQGV 178

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
            ARSVFS+TALINAYGR+GQ++ +L+LL RM+  E+I+PNILTYNTVI+AC RGGLDWE L
Sbjct: 179  ARSVFSYTALINAYGRHGQYETSLELLDRMKR-EKIAPNILTYNTVINACVRGGLDWEDL 237

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PD+VTYNTLLSAC  R LGDEAEMVFRTMNE GV PD+TT +YLV+T
Sbjct: 238  LGLFAEMRHEGIQPDIVTYNTLLSACGGRGLGDEAEMVFRTMNEGGVLPDLTTFSYLVET 297

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM   G+ P+V+ YNVLL+AHA+ GS KEAM VFRQMQ AG   N
Sbjct: 298  FGKLGKLEKVSELLREMESGGNLPDVTCYNVLLEAHAKMGSIKEAMDVFRQMQAAGSVAN 357

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY ILL+LY  +GRYDDVR+LFLEMK S+TEP+ ATYNILI+VFGEGGYFKEVVTLF+
Sbjct: 358  ATTYSILLNLYGRNGRYDDVRELFLEMKASNTEPNAATYNILIQVFGEGGYFKEVVTLFH 417

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEENVEPNMETYEGLIFACGKGGL+ED + ILL+MN++G VPS KAYTGV+EAYG AA
Sbjct: 418  DMVEENVEPNMETYEGLIFACGKGGLHEDVKKILLYMNERGTVPSSKAYTGVIEAYGLAA 477

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALVAFNTM EV S PT++TYNSL++TFA GGL+ E QAI  ++ ESGV +N+D+FN
Sbjct: 478  LYEEALVAFNTMNEVESKPTIETYNSLLHTFARGGLYKECQAILSRMSESGVARNSDSFN 537

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
             +IEAF QGG+FE A+KAY+EMEK RC+PNERT+EA+L VYC AGLVDES+E+F EI++S
Sbjct: 538  AVIEAFRQGGRFEEAIKAYVEMEKVRCDPNERTLEAVLSVYCFAGLVDESKEQFQEIKSS 597


>ref|XP_009764932.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Nicotiana sylvestris]
          Length = 860

 Score =  838 bits (2166), Expect = 0.0
 Identities = 403/539 (74%), Positives = 476/539 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKPKEL+LGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD FKNKLSL DF+ VF
Sbjct: 48   AKPKELILGNPTVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDTFKNKLSLTDFSHVF 107

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HIYT++IG+LGREGLLDK  E+FDEMP H V
Sbjct: 108  KEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTLMIGILGREGLLDKAFEIFDEMPSHSV 167

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
            AR+VFS+TA+INAYGRNGQ+  +L LL +M+  E+I P+ILTYNTVI++C+RGG +WEGL
Sbjct: 168  ARTVFSYTAIINAYGRNGQYGTSLQLLEKMKQ-EKIIPSILTYNTVINSCARGGHEWEGL 226

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            L LFAEMRH+GI PD+VTYNTLLSAC++R LGDEAEMVFRTMNEAG+ PDVTT++YLV T
Sbjct: 227  LSLFAEMRHEGIQPDLVTYNTLLSACSSRGLGDEAEMVFRTMNEAGILPDVTTYSYLVDT 286

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKLG+L++VS+LL EM   G+ PEV+SYNVLL+A+A  GS KEAM VFRQMQ AGC  N
Sbjct: 287  FGKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHSGSMKEAMDVFRQMQTAGCVAN 346

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            A TY +LL+LY  +GRYD VRDLFLEMK+S+TEPD  TYNILI+VFGEGGYFKEVVTLF+
Sbjct: 347  AETYSVLLNLYGKNGRYDQVRDLFLEMKMSNTEPDADTYNILIQVFGEGGYFKEVVTLFH 406

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DMVEE VEPNMETYEGLI+ACGKGGL++DA+ ILLHMN +G+VPS K YTGV+EAYG+AA
Sbjct: 407  DMVEEKVEPNMETYEGLIYACGKGGLHDDAKRILLHMNGQGLVPSSKVYTGVIEAYGQAA 466

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEA+VAFNTM EVGS P V+T+NSLI+ FA GGL+ ES+AIW ++ E GVP+N D+FN
Sbjct: 467  LYEEAVVAFNTMNEVGSRPMVETFNSLIHAFAKGGLYKESEAIWFRMGEVGVPRNRDSFN 526

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQA 4
            G+IE + QGGQFE A+KAY+EMEK RC+P+ERT+EA+L VYC AGLVDES E+F EI++
Sbjct: 527  GMIEGYRQGGQFEEAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESEEQFQEIKS 585



 Score = 94.0 bits (232), Expect = 4e-16
 Identities = 52/209 (24%), Positives = 105/209 (50%), Gaps = 1/209 (0%)
 Frame = -1

Query: 624 EPDVATYNILIEVFGEGGYFKEVVTLFNDMVEENVEPNMETYEGLIFACGKGGLYEDARH 445
           +P+   Y ++I + G  G   +   +F++M   +V   + +Y  +I A G+ G Y  +  
Sbjct: 133 KPNEHIYTLMIGILGREGLLDKAFEIFDEMPSHSVARTVFSYTAIINAYGRNGQYGTSLQ 192

Query: 444 ILLHMNDKGVVPSPKAYTGVVEAYGRAALYEEALVA-FNTMQEVGSMPTVDTYNSLIYTF 268
           +L  M  + ++PS   Y  V+ +  R     E L++ F  M+  G  P + TYN+L+   
Sbjct: 193 LLEKMKQEKIIPSILTYNTVINSCARGGHEWEGLLSLFAEMRHEGIQPDLVTYNTLLSAC 252

Query: 267 AGGGLFMESQAIWLKLKESGVPKNTDTFNGLIEAFSQGGQFEAALKAYLEMEKERCNPNE 88
           +  GL  E++ ++  + E+G+  +  T++ L++ F + G+ E   +  +EME    +P  
Sbjct: 253 SSRGLGDEAEMVFRTMNEAGILPDVTTYSYLVDTFGKLGKLEKVSELLMEMEAGGTSPEV 312

Query: 87  RTIEALLHVYCSAGLVDESRERFMEIQAS 1
            +   LL  Y  +G + E+ + F ++Q +
Sbjct: 313 TSYNVLLEAYAHSGSMKEAMDVFRQMQTA 341


>ref|XP_006579551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 858

 Score =  838 bits (2164), Expect = 0.0
 Identities = 404/540 (74%), Positives = 476/540 (88%)
 Frame = -1

Query: 1620 AKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVF 1441
            AKP  L+  NPSVTVEKGKYSYDVETLIN+L++LPPRGSIARCLD FKNKLSLNDFALVF
Sbjct: 46   AKPNVLIPINPSVTVEKGKYSYDVETLINRLTALPPRGSIARCLDPFKNKLSLNDFALVF 105

Query: 1440 KEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGV 1261
            KEFA RGDWQRSLRLFKYMQRQ+WCKPN+HI+TI+I +LGREGLLDKC+EVFDEMP +GV
Sbjct: 106  KEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGV 165

Query: 1260 ARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGL 1081
             R+V+S+TA+INAYGRNGQ   +L+LL+ M+  ER+SP+ILTYNTVI+AC+RGGLDWEGL
Sbjct: 166  VRTVYSYTAIINAYGRNGQFHASLELLNGMKQ-ERVSPSILTYNTVINACARGGLDWEGL 224

Query: 1080 LGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQT 901
            LGLFAEMRH+GI PDV+TYNTLL ACA R LGDEAEMVFRTMNE+G+ PD+ T++YLVQT
Sbjct: 225  LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQT 284

Query: 900  FGKLGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPN 721
            FGKL RL++VS+LL EM   G+ P+++SYNVLL+A+A  GS KEAM VFRQMQ AGC  N
Sbjct: 285  FGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVAN 344

Query: 720  AATYQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFN 541
            AATY +LL+LY  HGRYDDVRDLFLEMKVS+T+PD  TYNILI+VFGEGGYFKEVVTLF+
Sbjct: 345  AATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFH 404

Query: 540  DMVEENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAA 361
            DM EENVEPNM+TYEGLIFACGKGGLYEDA+ ILLHMN+KGVVPS KAYTGV+EA+G+AA
Sbjct: 405  DMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAA 464

Query: 360  LYEEALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMESQAIWLKLKESGVPKNTDTFN 181
            LYEEALV FNTM EVGS PTV+TYNSLI+ FA GGL+ E++AI  ++ ESG+ ++  +FN
Sbjct: 465  LYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFN 524

Query: 180  GLIEAFSQGGQFEAALKAYLEMEKERCNPNERTIEALLHVYCSAGLVDESRERFMEIQAS 1
            G+IEAF QGGQ+E A+K+Y+EMEK  C PNE T+EA+L +YCSAGLVDE  E+F EI+AS
Sbjct: 525  GVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKAS 584



 Score =  148 bits (374), Expect = 1e-32
 Identities = 111/451 (24%), Positives = 200/451 (44%), Gaps = 5/451 (1%)
 Frame = -1

Query: 1431 AHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQEVFDEMPQHGVARS 1252
            AHRG    +  +F+ M       P+ + Y+ ++   G+   L+K  E+  EM   G    
Sbjct: 251  AHRGLGDEAEMVFRTMNES-GIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPD 309

Query: 1251 VFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHACSRGGLDWEGLLGL 1072
            + S+  L+ AY   G  ++A+ +  +M++   ++ N  TY+ +++   + G  ++ +  L
Sbjct: 310  ITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVA-NAATYSVLLNLYGKHGR-YDDVRDL 367

Query: 1071 FAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEAGVAPDVTTHTYLVQTFGK 892
            F EM+     PD  TYN L+          E   +F  M E  V P++ T+  L+   GK
Sbjct: 368  FLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGK 427

Query: 891  LGRLQRVSQLLDEMADRGSPPEVSSYNVLLQAHARDGSTKEAMAVFRQMQGAGCPPNAAT 712
             G  +   ++L  M ++G  P   +Y  +++A  +    +EA+ +F  M   G  P   T
Sbjct: 428  GGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVET 487

Query: 711  YQILLSLYSSHGRYDDVRDLFLEMKVSSTEPDVATYNILIEVFGEGGYFKEVVTLFNDMV 532
            Y  L+  ++  G Y +   +   M  S  + DV ++N +IE F +GG ++E V  + +M 
Sbjct: 488  YNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEME 547

Query: 531  EENVEPNMETYEGLIFACGKGGLYEDARHILLHMNDKGVVPSPKAYTGVVEAYGRAALYE 352
            + N EPN  T E ++      GL ++       +   G++PS   Y  ++  Y +     
Sbjct: 548  KANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLN 607

Query: 351  EALVAFNTMQEVGSMPTVDTYNSLIYTFAGGGLFMES-----QAIWLKLKESGVPKNTDT 187
            +   A+N +  + +M   D +  +I     G    ES     + ++ KL   G       
Sbjct: 608  D---AYNLIDAMITMRVSDIH-QVIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRF 663

Query: 186  FNGLIEAFSQGGQFEAALKAYLEMEKERCNP 94
            +N L+EA     Q E A +   E  K    P
Sbjct: 664  YNALLEALWCMFQRERAARVLNEASKRGLFP 694



 Score = 61.2 bits (147), Expect = 3e-06
 Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 13/240 (5%)
 Frame = -1

Query: 1473 KLSLNDFALVFKEFAHRGDWQRSLRLFKYMQRQLWCKPNDHIYTIIIGVLGREGLLDKCQ 1294
            K  ++ F  V + F   G ++ +++ +  M++   C+PN+     ++ +    GL+D+ +
Sbjct: 517  KRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKAN-CEPNELTLEAVLSIYCSAGLVDEGE 575

Query: 1293 EVFDEMPQHGVARSVFSFTALINAYGRNGQHQDALDLLHRMRSVERISPNILTYNTVIHA 1114
            E F E+   G+  SV  +  ++  Y +N +  DA +L+  M     I+  +   + VI  
Sbjct: 576  EQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAM-----ITMRVSDIHQVIGQ 630

Query: 1113 CSRGGLD----WEGLLGLFAEMRHQGIIPDVVTYNTLLSACAARALGDEAEMVFRTMNEA 946
              +G  D    W+ +  +F ++  +G    +  YN LL A       + A  V    ++ 
Sbjct: 631  MIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWCMFQRERAARVLNEASKR 690

Query: 945  GVAPDVTTHTYL-----VQTFGKLGRLQRVSQLLD---EMADRGSP-PEVSSYNVLLQAH 793
            G+ P++   + L     V    + G L  +S  L+   EM+  G   PEV++  V+ + H
Sbjct: 691  GLFPELFRKSKLVWSVDVHRMSEGGALTALSVWLNNVHEMSMTGDDLPEVATVVVVSRGH 750