BLASTX nr result
ID: Cinnamomum25_contig00014011
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00014011
(672 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF,... 154 1e-65
ref|XP_008779218.1| PREDICTED: RNA polymerase sigma factor sigF,... 145 4e-63
ref|XP_008807704.1| PREDICTED: RNA polymerase sigma factor sigF,... 145 4e-63
ref|XP_011624483.1| PREDICTED: RNA polymerase sigma factor sigF,... 140 8e-63
gb|ERM94834.1| hypothetical protein AMTR_s00009p00072720 [Ambore... 140 8e-63
ref|XP_010035963.1| PREDICTED: RNA polymerase sigma factor sigF,... 156 1e-62
ref|XP_010035964.1| PREDICTED: RNA polymerase sigma factor sigF,... 156 1e-62
ref|XP_010035965.1| PREDICTED: RNA polymerase sigma factor sigF,... 156 1e-62
ref|XP_010035966.1| PREDICTED: RNA polymerase sigma factor sigF,... 156 1e-62
gb|KCW47482.1| hypothetical protein EUGRSUZ_K01255 [Eucalyptus g... 156 1e-62
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,... 151 5e-62
ref|XP_012082596.1| PREDICTED: RNA polymerase sigma factor sigF,... 147 1e-60
gb|KDP29141.1| hypothetical protein JCGZ_16530 [Jatropha curcas] 147 1e-60
ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutr... 149 5e-60
ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutr... 149 5e-60
ref|XP_009384040.1| PREDICTED: RNA polymerase sigma factor sigF,... 143 4e-58
ref|XP_009397530.1| PREDICTED: RNA polymerase sigma factor sigF,... 139 5e-54
ref|XP_003590454.1| RNA polymerase sigma factor [Medicago trunca... 138 2e-53
gb|AES60705.2| RNA polymerase sigma factor [Medicago truncatula] 138 2e-53
ref|XP_004497527.1| PREDICTED: RNA polymerase sigma factor sigF,... 134 9e-53
>ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Elaeis
guineensis]
Length = 570
Score = 154 bits (388), Expect(2) = 1e-65
Identities = 78/128 (60%), Positives = 96/128 (75%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI++EK+E LL + RNP+SI++ W D+ FQEITADPGVE PE+S KQ+MR+HV L
Sbjct: 443 GISVEKLEALLLTTRNPISIQECVWTDQDVKFQEITADPGVETPELSIAKQMMRQHVRGL 502
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
L IL PRERQIIQ +GI + E KSL +IG + G+SKERVRQ+ESRAL KLK L S GL
Sbjct: 503 LRILKPRERQIIQYRFGIPNNEQKSLTEIGAMFGLSKERVRQLESRALDKLKGCLPSHGL 562
Query: 47 EAYRGLLI 24
AY LL+
Sbjct: 563 GAYLELLL 570
Score = 123 bits (309), Expect(2) = 1e-65
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGS GLMKSL+KF+P+ GCRF+TYAYWWIRQSIR+A+ L SR I LPENV L
Sbjct: 356 SVQDLLQEGSRGLMKSLEKFKPKAGCRFATYAYWWIRQSIRRAIFLNSRVIRLPENVFGL 415
Query: 480 LTQIKNARKSYIQEGHHPTNEELA 409
L +IKNAR+ +IQEGH PTNEE+A
Sbjct: 416 LKRIKNARRLFIQEGHAPTNEEIA 439
>ref|XP_008779218.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Phoenix dactylifera]
Length = 529
Score = 145 bits (366), Expect(2) = 4e-63
Identities = 73/128 (57%), Positives = 96/128 (75%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI++E++++LL + RNP+SI++ AW D+ TFQEIT DP VE P++S KQ+MR+HV L
Sbjct: 402 GISVERLKVLLLTTRNPISIQECAWTDQDVTFQEITGDPEVETPDLSMAKQMMRQHVRGL 461
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
L IL PRERQIIQ +GI + + KSL +IG + G+SKERVRQ+ESRAL KLK S GL
Sbjct: 462 LRILKPRERQIIQYRFGIPNNKPKSLTEIGVMFGLSKERVRQLESRALDKLKDCRLSHGL 521
Query: 47 EAYRGLLI 24
AY LL+
Sbjct: 522 GAYLELLL 529
Score = 124 bits (310), Expect(2) = 4e-63
Identities = 59/81 (72%), Positives = 67/81 (82%)
Frame = -1
Query: 651 DVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHALLTQ 472
D+ EGS GLMKSL+KF+P+VGCRFSTYAYWWIRQSIRKA+ L SR I LPENV LL
Sbjct: 318 DLLQEGSRGLMKSLEKFKPKVGCRFSTYAYWWIRQSIRKAIFLNSRVIRLPENVFGLLKS 377
Query: 471 IKNARKSYIQEGHHPTNEELA 409
IK AR+ +IQEGH PTNEE+A
Sbjct: 378 IKKARRLFIQEGHAPTNEEIA 398
>ref|XP_008807704.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Phoenix dactylifera]
Length = 466
Score = 145 bits (366), Expect(2) = 4e-63
Identities = 73/128 (57%), Positives = 96/128 (75%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI++E++++LL + RNP+SI++ AW D+ TFQEIT DP VE P++S KQ+MR+HV L
Sbjct: 339 GISVERLKVLLLTTRNPISIQECAWTDQDVTFQEITGDPEVETPDLSMAKQMMRQHVRGL 398
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
L IL PRERQIIQ +GI + + KSL +IG + G+SKERVRQ+ESRAL KLK S GL
Sbjct: 399 LRILKPRERQIIQYRFGIPNNKPKSLTEIGVMFGLSKERVRQLESRALDKLKDCRLSHGL 458
Query: 47 EAYRGLLI 24
AY LL+
Sbjct: 459 GAYLELLL 466
Score = 124 bits (310), Expect(2) = 4e-63
Identities = 59/81 (72%), Positives = 67/81 (82%)
Frame = -1
Query: 651 DVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHALLTQ 472
D+ EGS GLMKSL+KF+P+VGCRFSTYAYWWIRQSIRKA+ L SR I LPENV LL
Sbjct: 255 DLLQEGSRGLMKSLEKFKPKVGCRFSTYAYWWIRQSIRKAIFLNSRVIRLPENVFGLLKS 314
Query: 471 IKNARKSYIQEGHHPTNEELA 409
IK AR+ +IQEGH PTNEE+A
Sbjct: 315 IKKARRLFIQEGHAPTNEEIA 335
>ref|XP_011624483.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
[Amborella trichopoda]
Length = 581
Score = 140 bits (352), Expect(2) = 8e-63
Identities = 70/127 (55%), Positives = 92/127 (72%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI ++K+E + ++ P+SI+Q W D+ T QEITADP VE PE + KQLMRRHV NL
Sbjct: 454 GITVDKLETVRVFSKLPVSIQQPVWSDQDVTIQEITADPKVETPEKNVAKQLMRRHVRNL 513
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
LS+L+PRERQ+I L +GI E KSL +IG + +SKER+RQVES+AL KLK+ ++GL
Sbjct: 514 LSLLNPRERQVINLRFGIQGRERKSLSEIGGMFNVSKERIRQVESKALEKLKNCTQTQGL 573
Query: 47 EAYRGLL 27
E Y LL
Sbjct: 574 EVYAELL 580
Score = 128 bits (321), Expect(2) = 8e-63
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGS+GLMKSL+KF+P+ GCRFSTYAYWWIRQ+IRK++ SRTI LPENV+ L
Sbjct: 367 SIQDLLQEGSVGLMKSLEKFKPKTGCRFSTYAYWWIRQAIRKSLFQNSRTIRLPENVYGL 426
Query: 480 LTQIKNARKSYIQEGHHPTNEELA 409
LT+IKNAR+ Y QEGH PTNEELA
Sbjct: 427 LTKIKNARRLYFQEGHRPTNEELA 450
>gb|ERM94834.1| hypothetical protein AMTR_s00009p00072720 [Amborella trichopoda]
Length = 573
Score = 140 bits (352), Expect(2) = 8e-63
Identities = 70/127 (55%), Positives = 92/127 (72%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI ++K+E + ++ P+SI+Q W D+ T QEITADP VE PE + KQLMRRHV NL
Sbjct: 446 GITVDKLETVRVFSKLPVSIQQPVWSDQDVTIQEITADPKVETPEKNVAKQLMRRHVRNL 505
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
LS+L+PRERQ+I L +GI E KSL +IG + +SKER+RQVES+AL KLK+ ++GL
Sbjct: 506 LSLLNPRERQVINLRFGIQGRERKSLSEIGGMFNVSKERIRQVESKALEKLKNCTQTQGL 565
Query: 47 EAYRGLL 27
E Y LL
Sbjct: 566 EVYAELL 572
Score = 128 bits (321), Expect(2) = 8e-63
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGS+GLMKSL+KF+P+ GCRFSTYAYWWIRQ+IRK++ SRTI LPENV+ L
Sbjct: 359 SIQDLLQEGSVGLMKSLEKFKPKTGCRFSTYAYWWIRQAIRKSLFQNSRTIRLPENVYGL 418
Query: 480 LTQIKNARKSYIQEGHHPTNEELA 409
LT+IKNAR+ Y QEGH PTNEELA
Sbjct: 419 LTKIKNARRLYFQEGHRPTNEELA 442
>ref|XP_010035963.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Eucalyptus grandis]
Length = 572
Score = 156 bits (394), Expect(2) = 1e-62
Identities = 78/135 (57%), Positives = 103/135 (76%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+Q+ GI+++K++ L+++ R PLS++Q W D+ TFQEITAD GVEIP++S +KQLM
Sbjct: 438 EQVAKRAGISVDKLQNLVSTTRTPLSLQQPVWSDQDTTFQEITADTGVEIPDLSVSKQLM 497
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
RRHV +LLS LSP+E QII+L YGI GE +SL DIG + G+SKERVRQ+ESRA+ KLK
Sbjct: 498 RRHVRSLLSTLSPKEGQIIKLRYGIDGGEQRSLSDIGNIFGLSKERVRQLESRAVYKLKQ 557
Query: 68 HLSSEGLEAYRGLLI 24
L S GL AY L+I
Sbjct: 558 CLGSHGLHAYGHLVI 572
Score = 111 bits (277), Expect(2) = 1e-62
Identities = 53/85 (62%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGSMGLMKS+ KF+PQ GCRF+TYAYWWIRQ++RKA+ SRTI LPENV+AL
Sbjct: 357 SLPDLLQEGSMGLMKSVGKFKPQAGCRFATYAYWWIRQTVRKAIFQNSRTIRLPENVYAL 416
Query: 480 LTQIKNARKSYIQEGHH-PTNEELA 409
L ++ A++S IQEGH P+ E++A
Sbjct: 417 LGKVMEAKRSCIQEGHRLPSKEQVA 441
>ref|XP_010035964.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Eucalyptus grandis] gi|629081036|gb|KCW47481.1|
hypothetical protein EUGRSUZ_K01255 [Eucalyptus grandis]
Length = 565
Score = 156 bits (394), Expect(2) = 1e-62
Identities = 78/135 (57%), Positives = 103/135 (76%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+Q+ GI+++K++ L+++ R PLS++Q W D+ TFQEITAD GVEIP++S +KQLM
Sbjct: 431 EQVAKRAGISVDKLQNLVSTTRTPLSLQQPVWSDQDTTFQEITADTGVEIPDLSVSKQLM 490
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
RRHV +LLS LSP+E QII+L YGI GE +SL DIG + G+SKERVRQ+ESRA+ KLK
Sbjct: 491 RRHVRSLLSTLSPKEGQIIKLRYGIDGGEQRSLSDIGNIFGLSKERVRQLESRAVYKLKQ 550
Query: 68 HLSSEGLEAYRGLLI 24
L S GL AY L+I
Sbjct: 551 CLGSHGLHAYGHLVI 565
Score = 111 bits (277), Expect(2) = 1e-62
Identities = 53/85 (62%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGSMGLMKS+ KF+PQ GCRF+TYAYWWIRQ++RKA+ SRTI LPENV+AL
Sbjct: 350 SLPDLLQEGSMGLMKSVGKFKPQAGCRFATYAYWWIRQTVRKAIFQNSRTIRLPENVYAL 409
Query: 480 LTQIKNARKSYIQEGHH-PTNEELA 409
L ++ A++S IQEGH P+ E++A
Sbjct: 410 LGKVMEAKRSCIQEGHRLPSKEQVA 434
>ref|XP_010035965.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X3 [Eucalyptus grandis]
Length = 564
Score = 156 bits (394), Expect(2) = 1e-62
Identities = 78/135 (57%), Positives = 103/135 (76%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+Q+ GI+++K++ L+++ R PLS++Q W D+ TFQEITAD GVEIP++S +KQLM
Sbjct: 430 EQVAKRAGISVDKLQNLVSTTRTPLSLQQPVWSDQDTTFQEITADTGVEIPDLSVSKQLM 489
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
RRHV +LLS LSP+E QII+L YGI GE +SL DIG + G+SKERVRQ+ESRA+ KLK
Sbjct: 490 RRHVRSLLSTLSPKEGQIIKLRYGIDGGEQRSLSDIGNIFGLSKERVRQLESRAVYKLKQ 549
Query: 68 HLSSEGLEAYRGLLI 24
L S GL AY L+I
Sbjct: 550 CLGSHGLHAYGHLVI 564
Score = 111 bits (277), Expect(2) = 1e-62
Identities = 53/85 (62%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGSMGLMKS+ KF+PQ GCRF+TYAYWWIRQ++RKA+ SRTI LPENV+AL
Sbjct: 349 SLPDLLQEGSMGLMKSVGKFKPQAGCRFATYAYWWIRQTVRKAIFQNSRTIRLPENVYAL 408
Query: 480 LTQIKNARKSYIQEGHH-PTNEELA 409
L ++ A++S IQEGH P+ E++A
Sbjct: 409 LGKVMEAKRSCIQEGHRLPSKEQVA 433
>ref|XP_010035966.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Eucalyptus grandis]
Length = 563
Score = 156 bits (394), Expect(2) = 1e-62
Identities = 78/135 (57%), Positives = 103/135 (76%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+Q+ GI+++K++ L+++ R PLS++Q W D+ TFQEITAD GVEIP++S +KQLM
Sbjct: 429 EQVAKRAGISVDKLQNLVSTTRTPLSLQQPVWSDQDTTFQEITADTGVEIPDLSVSKQLM 488
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
RRHV +LLS LSP+E QII+L YGI GE +SL DIG + G+SKERVRQ+ESRA+ KLK
Sbjct: 489 RRHVRSLLSTLSPKEGQIIKLRYGIDGGEQRSLSDIGNIFGLSKERVRQLESRAVYKLKQ 548
Query: 68 HLSSEGLEAYRGLLI 24
L S GL AY L+I
Sbjct: 549 CLGSHGLHAYGHLVI 563
Score = 111 bits (277), Expect(2) = 1e-62
Identities = 53/85 (62%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGSMGLMKS+ KF+PQ GCRF+TYAYWWIRQ++RKA+ SRTI LPENV+AL
Sbjct: 348 SLPDLLQEGSMGLMKSVGKFKPQAGCRFATYAYWWIRQTVRKAIFQNSRTIRLPENVYAL 407
Query: 480 LTQIKNARKSYIQEGHH-PTNEELA 409
L ++ A++S IQEGH P+ E++A
Sbjct: 408 LGKVMEAKRSCIQEGHRLPSKEQVA 432
>gb|KCW47482.1| hypothetical protein EUGRSUZ_K01255 [Eucalyptus grandis]
Length = 556
Score = 156 bits (394), Expect(2) = 1e-62
Identities = 78/135 (57%), Positives = 103/135 (76%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+Q+ GI+++K++ L+++ R PLS++Q W D+ TFQEITAD GVEIP++S +KQLM
Sbjct: 422 EQVAKRAGISVDKLQNLVSTTRTPLSLQQPVWSDQDTTFQEITADTGVEIPDLSVSKQLM 481
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
RRHV +LLS LSP+E QII+L YGI GE +SL DIG + G+SKERVRQ+ESRA+ KLK
Sbjct: 482 RRHVRSLLSTLSPKEGQIIKLRYGIDGGEQRSLSDIGNIFGLSKERVRQLESRAVYKLKQ 541
Query: 68 HLSSEGLEAYRGLLI 24
L S GL AY L+I
Sbjct: 542 CLGSHGLHAYGHLVI 556
Score = 111 bits (277), Expect(2) = 1e-62
Identities = 53/85 (62%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGSMGLMKS+ KF+PQ GCRF+TYAYWWIRQ++RKA+ SRTI LPENV+AL
Sbjct: 341 SLPDLLQEGSMGLMKSVGKFKPQAGCRFATYAYWWIRQTVRKAIFQNSRTIRLPENVYAL 400
Query: 480 LTQIKNARKSYIQEGHH-PTNEELA 409
L ++ A++S IQEGH P+ E++A
Sbjct: 401 LGKVMEAKRSCIQEGHRLPSKEQVA 425
>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
[Fragaria vesca subsp. vesca]
Length = 554
Score = 151 bits (381), Expect(2) = 5e-62
Identities = 74/128 (57%), Positives = 96/128 (75%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
G+++EK+ LL R P+S++QT W D+ TFQE+TAD G+EIP++S KQLMR+HV NL
Sbjct: 427 GMSVEKLGKLLYCTRMPVSMQQTVWADQDTTFQEVTADTGIEIPDLSVAKQLMRQHVRNL 486
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
L L RERQII+L YGI DG+ +SL +IG + G+SKERVRQ+ESRA KLK L S+GL
Sbjct: 487 LHTLEKRERQIIRLRYGIEDGKQRSLTEIGEIFGLSKERVRQLESRAFLKLKESLGSQGL 546
Query: 47 EAYRGLLI 24
AY LL+
Sbjct: 547 GAYAPLLV 554
Score = 114 bits (285), Expect(2) = 5e-62
Identities = 54/82 (65%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -1
Query: 651 DVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHALLTQ 472
D+ EGSMGLMKS++KF+PQ GCRF+TYAYWW+RQ+IRKA+ SRTI LPENV+ LL +
Sbjct: 342 DLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRTIRLPENVYTLLGK 401
Query: 471 IKNARKSYIQEGH-HPTNEELA 409
+ A+KSYIQEG+ +P+ EELA
Sbjct: 402 VLEAKKSYIQEGNQNPSREELA 423
>ref|XP_012082596.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Jatropha
curcas]
Length = 789
Score = 147 bits (370), Expect(2) = 1e-60
Identities = 72/135 (53%), Positives = 98/135 (72%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+++ + GI +E++E L+ AR PLS++Q W D+ QEITAD +EIP++S KQLM
Sbjct: 655 EELANRTGITVERLETLIFMARRPLSMQQPVWADQDTILQEITADTEIEIPDVSVAKQLM 714
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
R+HVH LL++L+ RERQII+L +G DG+ SL +IG V G+SKERVRQ+ESRAL KLK
Sbjct: 715 RQHVHGLLNVLNQRERQIIKLRFGFEDGKQMSLSEIGNVFGLSKERVRQLESRALHKLKQ 774
Query: 68 HLSSEGLEAYRGLLI 24
+ GLEAY LL+
Sbjct: 775 CHGNHGLEAYADLLV 789
Score = 114 bits (284), Expect(2) = 1e-60
Identities = 54/85 (63%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGSMGLMKS++KF+PQVGCRF+TYAYWWIRQ+IRKA+ SRTI LPENV+ +
Sbjct: 574 SLQDLMQEGSMGLMKSVEKFKPQVGCRFATYAYWWIRQTIRKAIFQHSRTIRLPENVYVI 633
Query: 480 LTQIKNARKSYIQEGH-HPTNEELA 409
L ++ +++ YIQEG+ +PT EELA
Sbjct: 634 LGKVMESKRLYIQEGNLNPTKEELA 658
>gb|KDP29141.1| hypothetical protein JCGZ_16530 [Jatropha curcas]
Length = 560
Score = 147 bits (370), Expect(2) = 1e-60
Identities = 72/135 (53%), Positives = 98/135 (72%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+++ + GI +E++E L+ AR PLS++Q W D+ QEITAD +EIP++S KQLM
Sbjct: 426 EELANRTGITVERLETLIFMARRPLSMQQPVWADQDTILQEITADTEIEIPDVSVAKQLM 485
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
R+HVH LL++L+ RERQII+L +G DG+ SL +IG V G+SKERVRQ+ESRAL KLK
Sbjct: 486 RQHVHGLLNVLNQRERQIIKLRFGFEDGKQMSLSEIGNVFGLSKERVRQLESRALHKLKQ 545
Query: 68 HLSSEGLEAYRGLLI 24
+ GLEAY LL+
Sbjct: 546 CHGNHGLEAYADLLV 560
Score = 114 bits (284), Expect(2) = 1e-60
Identities = 54/85 (63%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGSMGLMKS++KF+PQVGCRF+TYAYWWIRQ+IRKA+ SRTI LPENV+ +
Sbjct: 345 SLQDLMQEGSMGLMKSVEKFKPQVGCRFATYAYWWIRQTIRKAIFQHSRTIRLPENVYVI 404
Query: 480 LTQIKNARKSYIQEGH-HPTNEELA 409
L ++ +++ YIQEG+ +PT EELA
Sbjct: 405 LGKVMESKRLYIQEGNLNPTKEELA 429
>ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
gi|312282671|dbj|BAJ34201.1| unnamed protein product
[Thellungiella halophila] gi|557112045|gb|ESQ52329.1|
hypothetical protein EUTSA_v10016472mg [Eutrema
salsugineum]
Length = 547
Score = 149 bits (377), Expect(2) = 5e-60
Identities = 71/135 (52%), Positives = 101/135 (74%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+Q+ S G++ EK++ LL + R PLS++Q W D+ TFQE+T D G+E P +S KQLM
Sbjct: 413 EQLASHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIETPSMSVGKQLM 472
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
R HV NLL++LSP+E++II+L +GI G+ +SL +IG + G+SKERVRQ+ESRAL +LK
Sbjct: 473 RNHVRNLLNVLSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQ 532
Query: 68 HLSSEGLEAYRGLLI 24
++SS GL AY LL+
Sbjct: 533 NMSSHGLNAYADLLV 547
Score = 109 bits (272), Expect(2) = 5e-60
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Frame = -1
Query: 651 DVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHALLTQ 472
D+ EGSMGLMKS++KF+PQ GCRF+TYAYWWIRQSIRK++ SRTI LPENV+ LL +
Sbjct: 335 DLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGK 394
Query: 471 IKNARKSYIQEGHH-PTNEELA 409
+ ARK+ IQ+G++ P+ E+LA
Sbjct: 395 VSEARKTCIQDGNYRPSKEQLA 416
>ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
gi|557112044|gb|ESQ52328.1| hypothetical protein
EUTSA_v10016472mg [Eutrema salsugineum]
Length = 546
Score = 149 bits (377), Expect(2) = 5e-60
Identities = 71/135 (52%), Positives = 101/135 (74%)
Frame = -2
Query: 428 QQMKSWPGIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLM 249
+Q+ S G++ EK++ LL + R PLS++Q W D+ TFQE+T D G+E P +S KQLM
Sbjct: 412 EQLASHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIETPSMSVGKQLM 471
Query: 248 RRHVHNLLSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKH 69
R HV NLL++LSP+E++II+L +GI G+ +SL +IG + G+SKERVRQ+ESRAL +LK
Sbjct: 472 RNHVRNLLNVLSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQ 531
Query: 68 HLSSEGLEAYRGLLI 24
++SS GL AY LL+
Sbjct: 532 NMSSHGLNAYADLLV 546
Score = 109 bits (272), Expect(2) = 5e-60
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Frame = -1
Query: 651 DVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHALLTQ 472
D+ EGSMGLMKS++KF+PQ GCRF+TYAYWWIRQSIRK++ SRTI LPENV+ LL +
Sbjct: 334 DLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGK 393
Query: 471 IKNARKSYIQEGHH-PTNEELA 409
+ ARK+ IQ+G++ P+ E+LA
Sbjct: 394 VSEARKTCIQDGNYRPSKEQLA 415
>ref|XP_009384040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Musa
acuminata subsp. malaccensis]
Length = 577
Score = 143 bits (361), Expect(2) = 4e-58
Identities = 71/128 (55%), Positives = 96/128 (75%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI ++K+E+LL ++R P+SI++ W D+ TFQE ADP +EIP++ KQ+MR+HV NL
Sbjct: 450 GITVQKLEILLLNSRYPISIQRHPWLDQDVTFQETVADPKIEIPDLVIAKQMMRQHVRNL 509
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
L+IL PRER I+Q +GI E KSL +IG + G+SKERVRQ+ES+AL KL+ L S+GL
Sbjct: 510 LNILKPRERVIVQYRFGIRCSEQKSLSEIGAMYGLSKERVRQLESQALGKLRKCLQSQGL 569
Query: 47 EAYRGLLI 24
EAY LLI
Sbjct: 570 EAYLDLLI 577
Score = 108 bits (271), Expect(2) = 4e-58
Identities = 53/81 (65%), Positives = 62/81 (76%)
Frame = -1
Query: 651 DVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHALLTQ 472
D+ EGS GLMKSL+KF+P+ GCRF TYAYWWIRQSI+KA+ SRTI LPEN A L
Sbjct: 366 DLLQEGSRGLMKSLEKFKPRAGCRFPTYAYWWIRQSIKKAIFKNSRTIRLPENAFARLKS 425
Query: 471 IKNARKSYIQEGHHPTNEELA 409
I+ AR+ IQEG PTNEE+A
Sbjct: 426 IREARRLCIQEGLLPTNEEIA 446
>ref|XP_009397530.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Musa acuminata subsp. malaccensis]
Length = 201
Score = 139 bits (349), Expect(2) = 5e-54
Identities = 69/129 (53%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI ++K+E LL R+P+SI++ AW++ TFQEITADPGVEIP++ KQLMR+HV ++
Sbjct: 75 GITVKKLEKLLLYFRDPVSIQEHAWQN--VTFQEITADPGVEIPDLIVAKQLMRQHVRDI 132
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHH-LSSEG 51
L L P+ER+IIQ +G+H+ + K+L +IG + G+S ER+RQ+ESRAL+KLK L+++G
Sbjct: 133 LKTLKPKERKIIQYRFGMHENKKKTLSEIGDIYGLSNERIRQLESRALNKLKEWCLTTQG 192
Query: 50 LEAYRGLLI 24
L+AYR LL+
Sbjct: 193 LKAYRDLLV 201
Score = 100 bits (248), Expect(2) = 5e-54
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = -1
Query: 621 MKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHALLTQIKNARKSYIQ 442
MKSL+KF+P GCRF TY+YWWIRQSIRKA+ SR I LP+N++A L +IK AR+ IQ
Sbjct: 1 MKSLEKFKPNAGCRFPTYSYWWIRQSIRKAIFQNSRIIRLPDNIYAFLKEIKYARRLCIQ 60
Query: 441 EGHHPTNEELA 409
EG PTNEE+A
Sbjct: 61 EGRLPTNEEIA 71
>ref|XP_003590454.1| RNA polymerase sigma factor [Medicago truncatula]
Length = 567
Score = 138 bits (347), Expect(2) = 2e-53
Identities = 71/128 (55%), Positives = 95/128 (74%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI+ +K++ LL AR P+S++ T + TFQEITAD +E P +S KQLMRRHV N+
Sbjct: 440 GISPDKVDRLLFVARIPISMQNTVGSETDTTFQEITADCAIESPNMSVAKQLMRRHVLNV 499
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
L+IL P+ER+II+L +G DGE KSL +IG + G+S+ERVRQ+ESRAL KLK +L +GL
Sbjct: 500 LNILRPKERRIIRLRFGFEDGEEKSLSEIGEIFGLSRERVRQLESRALYKLKKYLVGQGL 559
Query: 47 EAYRGLLI 24
+AY LLI
Sbjct: 560 DAYADLLI 567
Score = 98.6 bits (244), Expect(2) = 2e-53
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGS GL+KS+KKF+ Q GCRF++YAYWWI+Q+IRKA+ SRTI LPE V+
Sbjct: 352 SIEDLLQEGSTGLIKSIKKFKTQAGCRFASYAYWWIKQAIRKAIYNHSRTIRLPEKVYNK 411
Query: 480 LTQIKNARKSYIQEGH-HPTNEELA 409
L+++ A+K Y +EG+ +PT EELA
Sbjct: 412 LSKVLEAKKLYKEEGNLNPTKEELA 436
>gb|AES60705.2| RNA polymerase sigma factor [Medicago truncatula]
Length = 561
Score = 138 bits (347), Expect(2) = 2e-53
Identities = 71/128 (55%), Positives = 95/128 (74%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI+ +K++ LL AR P+S++ T + TFQEITAD +E P +S KQLMRRHV N+
Sbjct: 434 GISPDKVDRLLFVARIPISMQNTVGSETDTTFQEITADCAIESPNMSVAKQLMRRHVLNV 493
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
L+IL P+ER+II+L +G DGE KSL +IG + G+S+ERVRQ+ESRAL KLK +L +GL
Sbjct: 494 LNILRPKERRIIRLRFGFEDGEEKSLSEIGEIFGLSRERVRQLESRALYKLKKYLVGQGL 553
Query: 47 EAYRGLLI 24
+AY LLI
Sbjct: 554 DAYADLLI 561
Score = 98.6 bits (244), Expect(2) = 2e-53
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGS GL+KS+KKF+ Q GCRF++YAYWWI+Q+IRKA+ SRTI LPE V+
Sbjct: 346 SIEDLLQEGSTGLIKSIKKFKTQAGCRFASYAYWWIKQAIRKAIYNHSRTIRLPEKVYNK 405
Query: 480 LTQIKNARKSYIQEGH-HPTNEELA 409
L+++ A+K Y +EG+ +PT EELA
Sbjct: 406 LSKVLEAKKLYKEEGNLNPTKEELA 430
>ref|XP_004497527.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Cicer arietinum]
Length = 576
Score = 134 bits (336), Expect(2) = 9e-53
Identities = 67/128 (52%), Positives = 92/128 (71%)
Frame = -2
Query: 407 GIALEKMEMLLASARNPLSIEQTAWRDEGATFQEITADPGVEIPEISATKQLMRRHVHNL 228
GI+ +K++ LL +R P+S+++T W + TFQEITAD +E ++S KQLMRRHV N
Sbjct: 449 GISADKVDSLLFVSRIPISMQKTVWAEHDTTFQEITADTAIESTDMSVAKQLMRRHVLNT 508
Query: 227 LSILSPRERQIIQLCYGIHDGEYKSLLDIGTVLGISKERVRQVESRALSKLKHHLSSEGL 48
L L P+ER+II+L +G DGE +SL +I + G+S+ERVRQ+ESRAL KLK L +GL
Sbjct: 509 LKTLRPKERRIIRLRFGFEDGEERSLSEIAEIFGLSRERVRQLESRALYKLKKSLVCQGL 568
Query: 47 EAYRGLLI 24
+AY LLI
Sbjct: 569 DAYADLLI 576
Score = 100 bits (250), Expect(2) = 9e-53
Identities = 49/85 (57%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = -1
Query: 660 SSSDVDNEGSMGLMKSLKKFEPQVGCRFSTYAYWWIRQSIRKAVVLKSRTICLPENVHAL 481
S D+ EGS GL+KS+KKF+PQ G RF YAYWWI+Q+IRKA+ SRTI LPE V+A
Sbjct: 361 SLEDLLQEGSTGLLKSVKKFKPQAGSRFGNYAYWWIKQAIRKAIFNHSRTIRLPEKVYAK 420
Query: 480 LTQIKNARKSYIQEGH-HPTNEELA 409
L+++ A+K Y++EG+ +PT EELA
Sbjct: 421 LSKVLEAKKLYMEEGNLNPTKEELA 445