BLASTX nr result

ID: Cinnamomum25_contig00012973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00012973
         (455 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278396.1| PREDICTED: F-box protein At4g09920-like [Nel...    69   1e-09
ref|XP_010932063.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    57   6e-06

>ref|XP_010278396.1| PREDICTED: F-box protein At4g09920-like [Nelumbo nucifera]
          Length = 554

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
 Frame = -3

Query: 336 PITLSDVIEIQL--GVLNIYTLSDIYDLFTNWNFPCLQKLMVKWSPECPFSYSWSGGV-- 169
           PIT  +++E+QL    L    LS +Y  F N  FPCL+KL ++          W   +  
Sbjct: 364 PITFPNLLELQLLMETLQYGYLSYMYGFFKNTRFPCLEKLFIQLPDYGDDPTPWEDSIMP 423

Query: 168 ---QPSGCVFHCLKMIEMNGFYGDDEQMQMVKFFLEKAVKLDTIVLV 37
              +PS CVF  L  I++N F G   ++ +VKFFL+KAV L   VLV
Sbjct: 424 DVKEPSECVFSDLHTIKINNFTGSSPELALVKFFLDKAVNLHFFVLV 470


>ref|XP_010932063.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Elaeis
           guineensis]
          Length = 458

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
 Frame = -3

Query: 342 NLPITLSDVIEIQLGVLNIYT---LSDIYDLFTNWNFPCLQKLMVKW--SPECPFSYSWS 178
           +LP+ L ++ E+QL +++++    L+ IY  F     P ++KL ++    PE P      
Sbjct: 284 DLPVLLPNLRELQL-LIDLFRSEELAYIYGFFRLCQTPFIEKLFIQLPKGPEDPQEIR-- 340

Query: 177 GGVQPSGCVFHCLKMIEMNGFYGDDEQMQMVKFFLEKAVKLDTIVLVLTPKEGRSE 10
              +PS   F+ LK I+++ F G   +M++V+F LE+AV L+T+VLV  PK    E
Sbjct: 341 SVPEPSDITFNHLKAIKLSNFKGGMSEMRLVRFLLERAVVLETMVLVAPPKADLKE 396


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