BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00012961
         (711 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010273707.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   265   2e-68
ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   265   2e-68
ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   264   3e-68
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   261   3e-67
ref|XP_012071554.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   261   4e-67
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ...   260   6e-67
ref|XP_011033373.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   259   1e-66
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...   258   3e-66
ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   256   7e-66
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   256   7e-66
ref|XP_004144791.2| PREDICTED: DNA-directed RNA polymerase 3, ch...   256   9e-66
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...   256   9e-66
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   255   2e-65
gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium r...   254   3e-65
ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   254   3e-65
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   254   3e-65
gb|KHG29144.1| DNA-directed RNA polymerase 3, chloroplastic -lik...   253   6e-65
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr...   253   6e-65
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   253   6e-65
ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isof...   252   1e-64

>ref|XP_010273707.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X2
           [Nelumbo nucifera]
          Length = 845

 Score =  265 bits (677), Expect = 2e-68
 Identities = 145/229 (63%), Positives = 172/229 (75%), Gaps = 7/229 (3%)
 Frame = -1

Query: 666 GRVFDEDPSWISSFFP-NDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEK 502
           GRVF +DP WISS     +L+G ++    G + +    EKRKYN LRRRQIK ETE WEK
Sbjct: 75  GRVFYDDPPWISSVLSARNLKGLEEGFGDGERGRLRDMEKRKYNALRRRQIKVETEAWEK 134

Query: 501 AAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHIL 322
            A EYREL REMCEKKLAPNLPYVK LFLGWFEPLR+AIE EQKLQE+K  KA+Y  +I 
Sbjct: 135 TAAEYRELEREMCEKKLAPNLPYVKSLFLGWFEPLREAIEKEQKLQESKKQKAAYAPYIG 194

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPR-R 145
           LLPADKMAVIVMHKMM LLMTGQE+G VRVVQAA++IGEAIEQEVRIH  L+KTKK +  
Sbjct: 195 LLPADKMAVIVMHKMMGLLMTGQEEGYVRVVQAAVHIGEAIEQEVRIHNFLKKTKKYQGG 254

Query: 144 KKIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKE-RMEPWSR 1
           KKIEG   +  +KE + L  RV  L+K++K  E+++L+  E  + PW R
Sbjct: 255 KKIEGQGDDKVTKEQDILRKRVNILVKKKKLIEVQKLVKNENEIRPWGR 303


>ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
           [Nelumbo nucifera]
          Length = 956

 Score =  265 bits (677), Expect = 2e-68
 Identities = 145/229 (63%), Positives = 172/229 (75%), Gaps = 7/229 (3%)
 Frame = -1

Query: 666 GRVFDEDPSWISSFFP-NDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEK 502
           GRVF +DP WISS     +L+G ++    G + +    EKRKYN LRRRQIK ETE WEK
Sbjct: 75  GRVFYDDPPWISSVLSARNLKGLEEGFGDGERGRLRDMEKRKYNALRRRQIKVETEAWEK 134

Query: 501 AAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHIL 322
            A EYREL REMCEKKLAPNLPYVK LFLGWFEPLR+AIE EQKLQE+K  KA+Y  +I 
Sbjct: 135 TAAEYRELEREMCEKKLAPNLPYVKSLFLGWFEPLREAIEKEQKLQESKKQKAAYAPYIG 194

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPR-R 145
           LLPADKMAVIVMHKMM LLMTGQE+G VRVVQAA++IGEAIEQEVRIH  L+KTKK +  
Sbjct: 195 LLPADKMAVIVMHKMMGLLMTGQEEGYVRVVQAAVHIGEAIEQEVRIHNFLKKTKKYQGG 254

Query: 144 KKIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKE-RMEPWSR 1
           KKIEG   +  +KE + L  RV  L+K++K  E+++L+  E  + PW R
Sbjct: 255 KKIEGQGDDKVTKEQDILRKRVNILVKKKKLIEVQKLVKNENEIRPWGR 303


>ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Populus
           euphratica]
          Length = 983

 Score =  264 bits (675), Expect = 3e-68
 Identities = 136/227 (59%), Positives = 169/227 (74%), Gaps = 4/227 (1%)
 Frame = -1

Query: 669 SGRVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEK 502
           S RVF +DP WIS+ F    +G  KI    VK +    EKRKYN+LRRRQI+ ETE WE+
Sbjct: 107 SKRVFIQDPPWISAHF---WKGVYKIANKKVKVEFKDIEKRKYNLLRRRQIREETEAWER 163

Query: 501 AAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHIL 322
            A+EYR L REMCE+KLAPNLPYVK L LGWFEPL++AIE EQK++++K  K+++  +I 
Sbjct: 164 MADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNIE 223

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADKMAVIVMHKMM LLM G EDGCVRVVQAA+ IG AIEQEVRIH  LEKTK  +RK
Sbjct: 224 LLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNHQRK 283

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           K   D+ E+  KE E L  RV SL++R++  E++ L+ ++  +PWSR
Sbjct: 284 KTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVKQDETKPWSR 330


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 882

 Score =  261 bits (667), Expect = 3e-67
 Identities = 133/227 (58%), Positives = 168/227 (74%), Gaps = 4/227 (1%)
 Frame = -1

Query: 669 SGRVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEK 502
           S +VF +DP WIS+ F    +G  K+    VK +    EKRKYN+LRRRQI+ ETE WE+
Sbjct: 6   SKKVFIQDPPWISAHF---WKGMYKLANKKVKVEFKDIEKRKYNLLRRRQIREETEAWER 62

Query: 501 AAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHIL 322
            A+EYR L REMCE+KLAPNLPYVK L LGWFEPL++AIE EQK++++K  K+++  +I 
Sbjct: 63  MADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNIE 122

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADKMAVIVMHKMM LLM G EDGCVRVVQAA+ IG AIEQEVRIH  LEKTK  +RK
Sbjct: 123 LLPADKMAVIVMHKMMGLLMVGHEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQRK 182

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           K   ++ E   KE E L  RV SL++R++  E++ L+ ++  +PWSR
Sbjct: 183 KTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSR 229


>ref|XP_012071554.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Jatropha
           curcas]
          Length = 993

 Score =  261 bits (666), Expect = 4e-67
 Identities = 130/225 (57%), Positives = 166/225 (73%), Gaps = 4/225 (1%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEKAA 496
           RVF +DP WIS+ F   L+G  K+     K +    EKRKYN+LRRRQI+ ETE WE+ A
Sbjct: 120 RVFIQDPPWISALF---LKGLYKVANRKFKVEFKDIEKRKYNLLRRRQIREETEAWERMA 176

Query: 495 EEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHILLL 316
           +EY+ + REMC+KKLAPNLPYVK LFLGWFEPL++AIE EQKLQ +K  K+++  HI LL
Sbjct: 177 DEYKGMVREMCDKKLAPNLPYVKGLFLGWFEPLKEAIEAEQKLQRSKKQKSAFAPHIELL 236

Query: 315 PADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRKKI 136
           PADKMA+IVMHKMM L+M G EDGCV VVQAA+ IG A+EQEVRIH  LEKTK  +RK  
Sbjct: 237 PADKMALIVMHKMMGLMMVGHEDGCVPVVQAAVQIGMAVEQEVRIHNFLEKTKSFQRKNA 296

Query: 135 EGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
            GD  E+ SKE E L  R+ +L++R++  ++++L+  E  +PW R
Sbjct: 297 VGDAQESLSKEKEVLRKRINNLIRRKRLIQVQKLVRNEETKPWGR 341


>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
           [Ricinus communis] gi|223532193|gb|EEF33998.1|
           DNA-directed RNA polymerase 3B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 1000

 Score =  260 bits (664), Expect = 6e-67
 Identities = 134/227 (59%), Positives = 164/227 (72%), Gaps = 4/227 (1%)
 Frame = -1

Query: 669 SGRVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEK 502
           S RVF +DP WIS+ F    +G  KI    VK +    EKRKYN+LRRRQI+ ETE WE+
Sbjct: 111 SRRVFIQDPPWISALF---FKGLYKIPNKEVKLEFKDIEKRKYNLLRRRQIREETEAWER 167

Query: 501 AAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHIL 322
             EEY+ L +EMCE+KLAPNLPYVK LFLGWFEPL++ I+ EQ LQ +K +KA++  HI 
Sbjct: 168 MVEEYKALVKEMCERKLAPNLPYVKGLFLGWFEPLKEGIKSEQNLQRSKKNKAAFAPHIE 227

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADKMAVIVMHKM+ LLM G EDGCV +VQAA+ IG AIEQEVRIH  LEKTK  +RK
Sbjct: 228 LLPADKMAVIVMHKMVGLLMVGHEDGCVPLVQAAVQIGMAIEQEVRIHNFLEKTKNYQRK 287

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           K      E+  KE E L  RV SL++R+K  E+++L+  E M+PW R
Sbjct: 288 KTISGAQESLGKEKEILRKRVNSLIRRKKLIEVQKLVKNEEMKPWGR 334


>ref|XP_011033373.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Populus euphratica]
          Length = 982

 Score =  259 bits (662), Expect = 1e-66
 Identities = 134/227 (59%), Positives = 167/227 (73%), Gaps = 4/227 (1%)
 Frame = -1

Query: 669 SGRVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEK 502
           S RVF  D  WIS+ +    +G  KI    VK +    EKRKYN+LRRRQI+ ETE WE+
Sbjct: 106 SKRVFIRDSPWISALY---WKGTHKIANKKVKLELKDIEKRKYNLLRRRQIREETEAWER 162

Query: 501 AAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHIL 322
            AEEY  L +EMCE+KLAPNLPYVK LFLGWFEPL++AIE EQKL+++K  K+++  +I 
Sbjct: 163 MAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPYIE 222

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADKMAVIVMHKMM L+M G EDGCVRVVQAA+ IG AIEQEVRIH  LEKTK  +RK
Sbjct: 223 LLPADKMAVIVMHKMMGLVMVGHEDGCVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRK 282

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           K   D+ E+  KE E L  RV SL++R++  E++ L+ ++  +PWSR
Sbjct: 283 KTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDETKPWSR 329


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
           gi|222854390|gb|EEE91937.1| hypothetical protein
           POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score =  258 bits (658), Expect = 3e-66
 Identities = 133/227 (58%), Positives = 167/227 (73%), Gaps = 4/227 (1%)
 Frame = -1

Query: 669 SGRVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEK 502
           S RVF  D  WIS+ +    +G  KI    VK +    EKRKYN+LRRRQI+ ETE WE+
Sbjct: 106 SKRVFIRDSPWISALY---WKGTHKIANKKVKLELKDIEKRKYNLLRRRQIREETEAWER 162

Query: 501 AAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHIL 322
            AEEY  L +EMCE+KLAPNLPYVK LFLGWFEPL++AIE EQKL+++K  K+++  +I 
Sbjct: 163 MAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNIE 222

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADKMAVIVMHKMM L+M G EDGCVRVVQAA+ IG AIEQEVRIH  LEKTK  +RK
Sbjct: 223 LLPADKMAVIVMHKMMGLVMVGHEDGCVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRK 282

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           K   D+ E+  KE E L  RV SL++R++  E++ L+ ++  +PW+R
Sbjct: 283 KTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDETKPWNR 329


>ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Prunus
           mume]
          Length = 976

 Score =  256 bits (655), Expect = 7e-66
 Identities = 129/223 (57%), Positives = 169/223 (75%), Gaps = 2/223 (0%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAKE--KRKYNMLRRRQIKTETEGWEKAAEE 490
           R+F +DP WI+S F   +  ++  +EL +++KE  +R YN+LRRRQIK ETE WE+  +E
Sbjct: 102 RIFIQDPPWIASLFLKGIY-KRANQELKLESKEIERRNYNLLRRRQIKAETEAWERMVDE 160

Query: 489 YRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHILLLPA 310
           Y++L + M EKKLAPNLPYVK LFLGWFEPLR+AI  EQK Q+TK HKA++  HI LLPA
Sbjct: 161 YKDLEKVMREKKLAPNLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPA 220

Query: 309 DKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRKKIEG 130
           DKMA+IVMHKMM L+M G +DGCV+VVQAA++IG AIEQEVRIH+ LEKTK  ++KK   
Sbjct: 221 DKMALIVMHKMMGLVMVGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGV 280

Query: 129 DMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
              +  SKE E L  RV  L++R++ NE+++L+ KE M+PW R
Sbjct: 281 ADEDGLSKEKEILRKRVNGLIRRKRLNEVQKLLIKEEMKPWGR 323


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  256 bits (655), Expect = 7e-66
 Identities = 132/225 (58%), Positives = 161/225 (71%), Gaps = 4/225 (1%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEKAA 496
           R+F +DP WISSF  +D   + +     VK +    E+R Y +LRRRQ+K ETE WE+  
Sbjct: 103 RIFVQDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWERMV 162

Query: 495 EEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHILLL 316
           EEYRE+ REMCEKKLAPNLPYVK LFLGWFEPLR+AI+ EQ+ Q TK  KA+Y  HI LL
Sbjct: 163 EEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELL 222

Query: 315 PADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRKKI 136
           PADKMAVIVMHKMM L+M G E+GCVRVVQAA+ IG AIEQEVRIH+ LEKTK   R K 
Sbjct: 223 PADKMAVIVMHKMMGLVMMGHEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKT 282

Query: 135 EGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
            G   E   +E E L  RVKS ++++K  E+++L+  E + PW R
Sbjct: 283 VGHSQE-GLREKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWGR 326


>ref|XP_004144791.2| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis
           sativus] gi|700205944|gb|KGN61063.1| hypothetical
           protein Csa_2G036610 [Cucumis sativus]
          Length = 975

 Score =  256 bits (654), Expect = 9e-66
 Identities = 134/227 (59%), Positives = 166/227 (73%), Gaps = 4/227 (1%)
 Frame = -1

Query: 669 SGRVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEK 502
           S R+F +DP WI+S F   L+G  K  +  VK +    EKRKYN+LRRRQIK ETE WEK
Sbjct: 101 SKRIFIQDPPWIASLF---LKGLYKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEK 157

Query: 501 AAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHIL 322
             EEY+EL REMCEKKLAPNLPYVKKLFLGWFEPL++AIE+EQK Q +K  KA++  HI 
Sbjct: 158 MVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIE 217

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LL ADKMAVIVM+KMM LLM   +DGCV+VVQAA+ IG AIEQEVRI +ILEK +  +R 
Sbjct: 218 LLSADKMAVIVMYKMMGLLMMAAQDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRT 277

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           K+  D  E  +KE E L  +V  L++R+K  E+++L+ KE  + W R
Sbjct: 278 KVRADT-ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGR 323


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
           gi|462398756|gb|EMJ04424.1| hypothetical protein
           PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  256 bits (654), Expect = 9e-66
 Identities = 129/223 (57%), Positives = 169/223 (75%), Gaps = 2/223 (0%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAKE--KRKYNMLRRRQIKTETEGWEKAAEE 490
           R+F +DP WI+S F   +  ++  +EL +++KE  +R YN+LRRRQIK ETE WE+  +E
Sbjct: 102 RIFIQDPPWIASLFLKGIY-KRANQELKLESKEIERRNYNVLRRRQIKAETEAWERMVDE 160

Query: 489 YRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHILLLPA 310
           Y++L + M EKKLAPNLPYVK LFLGWFEPLR+AI  EQK Q+TK HKA++  HI LLPA
Sbjct: 161 YKDLEKVMREKKLAPNLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPA 220

Query: 309 DKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRKKIEG 130
           DKMA+IVMHKMM L+M G +DGCV+VVQAA++IG AIEQEVRIH+ LEKTK  ++KK   
Sbjct: 221 DKMALIVMHKMMGLVMVGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGV 280

Query: 129 DMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
              +  SKE E L  RV  L++R++ NE+++L+ KE M+PW R
Sbjct: 281 ADEDGLSKEKEILRKRVNGLIRRKRLNEVQKLLIKEEMKPWGR 323


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Fragaria
           vesca subsp. vesca]
          Length = 973

 Score =  255 bits (652), Expect = 2e-65
 Identities = 134/229 (58%), Positives = 172/229 (75%), Gaps = 4/229 (1%)
 Frame = -1

Query: 675 IDSGRVFDEDPSWISSFFPNDLEGQ-KKI-EELGVKAKE--KRKYNMLRRRQIKTETEGW 508
           I   R+F +DP WI+S F   L+G  KK+ +EL V++KE  +RKYN+LRRRQIK ETE W
Sbjct: 95  ISEPRIFIQDPPWIASLF---LKGMFKKVNKELKVESKEIDRRKYNLLRRRQIKAETEAW 151

Query: 507 EKAAEEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRH 328
           EK  E+Y++L R M EKKLAP+LPYVK LFLGWFEPLR+AI  EQK Q+TK HK ++  H
Sbjct: 152 EKMVEDYKDLERVMREKKLAPSLPYVKALFLGWFEPLREAIAKEQKAQQTKKHKQAFAPH 211

Query: 327 ILLLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPR 148
           I LLPADKMA+IVMHK+M L+M G +DGCV+VVQAA++IG AIEQEVRIH+ LEK+K  +
Sbjct: 212 IDLLPADKMALIVMHKLMGLVMMGNQDGCVQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQ 271

Query: 147 RKKIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           RKK      +  SKE E L  RV  L++R++  E+++L+ KE M+PW R
Sbjct: 272 RKKTSVADEDGLSKEKEILRKRVNGLIRRKRLVEVQKLLKKEDMKPWGR 320


>gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score =  254 bits (649), Expect = 3e-65
 Identities = 135/227 (59%), Positives = 170/227 (74%), Gaps = 6/227 (2%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEKAA 496
           R+F +DP WIS+ F    +G  K+    VK +    EKRKYN+LRRRQ+K ETE WEK  
Sbjct: 97  RIFIQDPPWISALF---WKGLYKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMV 153

Query: 495 EEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHK--ASYGRHIL 322
           EEYREL REMCEKKLAPNLPYVK LFLGWFEPLR+AI  EQK+Q+ K  K  A+Y  HI 
Sbjct: 154 EEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIE 213

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADK+AVIVMHKMM L+M  +EDG V+VVQAA++IG AIEQEVRIH+ LEKTK  +RK
Sbjct: 214 LLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRK 273

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           +I  ++ + +SKE E L  RV SL++R++  E+++L+  E ++PW R
Sbjct: 274 QIVDEV-QGASKEKEILRKRVNSLIRRRRLTEVQKLVKNEEIKPWGR 319


>ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
           raimondii] gi|763786877|gb|KJB53873.1| hypothetical
           protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score =  254 bits (649), Expect = 3e-65
 Identities = 135/227 (59%), Positives = 170/227 (74%), Gaps = 6/227 (2%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEKAA 496
           R+F +DP WIS+ F    +G  K+    VK +    EKRKYN+LRRRQ+K ETE WEK  
Sbjct: 97  RIFIQDPPWISALF---WKGLYKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMV 153

Query: 495 EEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHK--ASYGRHIL 322
           EEYREL REMCEKKLAPNLPYVK LFLGWFEPLR+AI  EQK+Q+ K  K  A+Y  HI 
Sbjct: 154 EEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREAIAKEQKVQKGKNKKLRAAYAPHIE 213

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADK+AVIVMHKMM L+M  +EDG V+VVQAA++IG AIEQEVRIH+ LEKTK  +RK
Sbjct: 214 LLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRK 273

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           +I  ++ + +SKE E L  RV SL++R++  E+++L+  E ++PW R
Sbjct: 274 QIVDEV-QGASKEKEILRKRVNSLIRRRRLTEVQKLVKNEEIKPWGR 319


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Citrus sinensis]
          Length = 1009

 Score =  254 bits (649), Expect = 3e-65
 Identities = 127/221 (57%), Positives = 162/221 (73%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAKEKRKYNMLRRRQIKTETEGWEKAAEEYR 484
           R+F +DP W SS F   L  + K++E   +  +KRK+N+LRRRQ+K ETE WE+  +EY+
Sbjct: 138 RIFVQDPPWFSSIFLKGLYKRIKLQEY--REMKKRKFNLLRRRQVKQETEAWERMVDEYK 195

Query: 483 ELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHILLLPADK 304
           EL  +M EK+LAPNLP++K LFLGWF PLR+AIE EQK+Q TK  KA+Y  HI LLPADK
Sbjct: 196 ELEAKMIEKRLAPNLPHIKGLFLGWFGPLREAIEREQKMQRTKKQKAAYAPHIELLPADK 255

Query: 303 MAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRKKIEGDM 124
           +AVIVMHKMM L+M G ED CV+VVQAA++IG AIEQE+RIH+ LEKTK  +RKKI  D 
Sbjct: 256 VAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADT 315

Query: 123 HEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
            E  SKE E L  RV SL+K ++  E ++L+  E  +PW R
Sbjct: 316 EEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGR 356


>gb|KHG29144.1| DNA-directed RNA polymerase 3, chloroplastic -like protein
           [Gossypium arboreum]
          Length = 1024

 Score =  253 bits (647), Expect = 6e-65
 Identities = 135/227 (59%), Positives = 169/227 (74%), Gaps = 6/227 (2%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEKAA 496
           R+F +DP WIS+ F    +G  K+    VK +    EKRKYN+LRRRQ+K ETE WEK  
Sbjct: 97  RIFIQDPPWISALF---WKGLYKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMV 153

Query: 495 EEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHK--ASYGRHIL 322
           EEYREL REMCEKKLAPNLPYVK LFLGWFEPLR+AI  EQK+Q+ K  K  A+Y  HI 
Sbjct: 154 EEYRELEREMCEKKLAPNLPYVKGLFLGWFEPLREAIAKEQKVQKGKSKKLRAAYAPHIE 213

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADK+AVIVMHKMM L+M  +EDG V+VVQAA++IG AIEQEVRIH+ LEKTK  +RK
Sbjct: 214 LLPADKLAVIVMHKMMGLVMGAEEDGYVQVVQAAVHIGVAIEQEVRIHSFLEKTKNYQRK 273

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           +I  ++ +  SKE E L  RV SL++R++  E+++L+  E ++PW R
Sbjct: 274 QIVDEV-QGVSKEKEILRKRVNSLIRRRRLTEVQKLVKNEEIKPWGR 319


>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
           gi|557556793|gb|ESR66807.1| hypothetical protein
           CICLE_v10007333mg [Citrus clementina]
          Length = 986

 Score =  253 bits (647), Expect = 6e-65
 Identities = 127/221 (57%), Positives = 161/221 (72%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAKEKRKYNMLRRRQIKTETEGWEKAAEEYR 484
           R+F +DP W SS F   L  + K++E   +  +KRK+N+LRRRQ+K ETE WE+  +EY+
Sbjct: 141 RIFVQDPPWFSSIFLKGLYKRIKLQEY--REMKKRKFNLLRRRQVKQETEAWERMVDEYK 198

Query: 483 ELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHILLLPADK 304
           EL  +M EK+LAPNLP++K LFLGWF PL +AIE EQK+Q TK  KA+Y  HI LLPADK
Sbjct: 199 ELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADK 258

Query: 303 MAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRKKIEGDM 124
           MAVIVMHKMM L+M G ED CV+VVQAA++IG AIEQE+RIH+ LEKTK  +RKKI  D 
Sbjct: 259 MAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADT 318

Query: 123 HEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
            E  SKE E L  RV SL+K ++  E ++L+  E  +PW R
Sbjct: 319 EEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGR 359


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
           gi|557556792|gb|ESR66806.1| hypothetical protein
           CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  253 bits (647), Expect = 6e-65
 Identities = 127/221 (57%), Positives = 161/221 (72%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAKEKRKYNMLRRRQIKTETEGWEKAAEEYR 484
           R+F +DP W SS F   L  + K++E   +  +KRK+N+LRRRQ+K ETE WE+  +EY+
Sbjct: 141 RIFVQDPPWFSSIFLKGLYKRIKLQEY--REMKKRKFNLLRRRQVKQETEAWERMVDEYK 198

Query: 483 ELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHKASYGRHILLLPADK 304
           EL  +M EK+LAPNLP++K LFLGWF PL +AIE EQK+Q TK  KA+Y  HI LLPADK
Sbjct: 199 ELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADK 258

Query: 303 MAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRKKIEGDM 124
           MAVIVMHKMM L+M G ED CV+VVQAA++IG AIEQE+RIH+ LEKTK  +RKKI  D 
Sbjct: 259 MAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADT 318

Query: 123 HEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
            E  SKE E L  RV SL+K ++  E ++L+  E  +PW R
Sbjct: 319 EEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGR 359


>ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
           gi|508784242|gb|EOY31498.1| DNA/RNA polymerases
           superfamily protein isoform 3 [Theobroma cacao]
          Length = 927

 Score =  252 bits (644), Expect = 1e-64
 Identities = 136/227 (59%), Positives = 168/227 (74%), Gaps = 6/227 (2%)
 Frame = -1

Query: 663 RVFDEDPSWISSFFPNDLEGQKKIEELGVKAK----EKRKYNMLRRRQIKTETEGWEKAA 496
           R+F +DP WIS+ F   L+G  K+    VK +    EKRKYN+LRRRQ+K ETE WEK  
Sbjct: 103 RLFIQDPPWISALF---LKGLYKMTNQTVKIEHKEIEKRKYNLLRRRQVKEETEAWEKMV 159

Query: 495 EEYRELAREMCEKKLAPNLPYVKKLFLGWFEPLRDAIEDEQKLQETKMHK--ASYGRHIL 322
           EEYREL REMCEKKLAPNLPYVK LFLGWFEP+R+AI  EQK+Q+ K  K  A+Y  HI 
Sbjct: 160 EEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAIAREQKVQKGKSKKLRAAYAPHIE 219

Query: 321 LLPADKMAVIVMHKMMSLLMTGQEDGCVRVVQAAINIGEAIEQEVRIHTILEKTKKPRRK 142
           LLPADKMAVIVMHKMM L+M  QE+G V+VVQAA++IG AIEQEVRIH  LEKTK  +RK
Sbjct: 220 LLPADKMAVIVMHKMMGLVMGAQENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRK 279

Query: 141 KIEGDMHEASSKEAETLHIRVKSLMKRQKRNELRRLIDKERMEPWSR 1
           K   ++ +  SKE E L  RV SL++R++  E+++L+  E ++PW R
Sbjct: 280 KTTDEV-QGLSKEKEILKKRVNSLIRRRRLVEVQKLVKNEEIKPWGR 325