BLASTX nr result

ID: Cinnamomum25_contig00012827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00012827
         (685 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010905854.1| PREDICTED: putative F-box protein At4g22660 ...    61   7e-07
ref|XP_010045294.1| PREDICTED: uncharacterized protein LOC104434...    60   1e-06
ref|XP_010940778.1| PREDICTED: F-box protein SKIP23-like [Elaeis...    59   2e-06
ref|XP_010940782.1| PREDICTED: putative F-box protein At4g22660 ...    59   3e-06
ref|XP_010909847.1| PREDICTED: putative F-box protein At4g22660 ...    58   4e-06
ref|XP_010909848.1| PREDICTED: F-box protein At2g05970-like [Ela...    58   6e-06
ref|XP_010910511.1| PREDICTED: probable F-box protein At4g22060,...    57   7e-06
ref|XP_010905853.1| PREDICTED: F-box protein At2g17036-like [Ela...    57   9e-06

>ref|XP_010905854.1| PREDICTED: putative F-box protein At4g22660 [Elaeis guineensis]
          Length = 415

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
 Frame = -3

Query: 473 MSNWVLVDLPKALVERISDLCLPPDYIRMQSVCKLWQLILKNRR---QYELPWLMMQNEA 303
           ++NW    LP  L   I       DY+R  +VC+ W   +  R    + ++PWLM+ +  
Sbjct: 3   LNNWAA--LPLELQALILGRLEVADYLRFGAVCRSWCSTVAERPCLPKPQIPWLMLSDST 60

Query: 302 -DPDAFDFSSIY*QKLHTIHLPEIRHKRCIGSFKNGWVIIFDKM 174
            DPD   F S   QK++ IHLPEI  + CIGS   GW+I  D++
Sbjct: 61  RDPDTRRFFSRPDQKMYKIHLPEIHGRLCIGS-SEGWLITVDEL 103


>ref|XP_010045294.1| PREDICTED: uncharacterized protein LOC104434043 [Eucalyptus
           grandis] gi|702280501|ref|XP_010045295.1| PREDICTED:
           uncharacterized protein LOC104434043 [Eucalyptus
           grandis] gi|629122964|gb|KCW87454.1| hypothetical
           protein EUGRSUZ_B03923 [Eucalyptus grandis]
          Length = 811

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = -3

Query: 467 NWVLVDLPKALVERISD-LCLPPDYIRMQSVCKLWQLILK-NRRQYELPWLMMQNEADPD 294
           NW    LPK L+E ISD L    D++R ++VC+ W  I   +R  +++PWL+     D D
Sbjct: 6   NWP--QLPKELLEMISDQLTGLDDHVRFRAVCRSWASIRPPSRVPHQMPWLLHPCNQDTD 63

Query: 293 AFDFSSIY*QKLHTIHLPEIRHKRCIGSFKNGWVIIFDKMQLRIRLFHP 147
              F SI   K +    PE   KRC GS   GW+ + D     I LF+P
Sbjct: 64  TRSFVSISENKFYRFSSPEFLGKRCCGS-SYGWLALLDGTP-EILLFNP 110


>ref|XP_010940778.1| PREDICTED: F-box protein SKIP23-like [Elaeis guineensis]
          Length = 412

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
 Frame = -3

Query: 401 DYIRMQSVCKLWQLILKNRR---QYELPWLMMQNEA-DPDAFDFSSIY*QKLHTIHLPEI 234
           DY+R  +VC+ W   +  R    + ++PWLM+ +   DPD+  F S   QK++ IHLPEI
Sbjct: 22  DYLRFGAVCRSWCSTVAERPCLPKPQIPWLMLSDSTRDPDSRRFFSRPDQKMYKIHLPEI 81

Query: 233 RHKRCIGSFKNGWVIIFDKM 174
             + CIGS   GW+I  D++
Sbjct: 82  HGRLCIGS-SEGWLITVDEL 100


>ref|XP_010940782.1| PREDICTED: putative F-box protein At4g22660 [Elaeis guineensis]
          Length = 273

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
 Frame = -3

Query: 473 MSNWVLVDLPKALVERISDLCLPPDYIRMQSVCKLWQLILKNRR---QYELPWLMMQNE- 306
           ++NW    LP  L   I       DY+R  +VC+ W   +  R    + ++PWLM+ +  
Sbjct: 3   LNNWAA--LPPELQALILGRLEVADYLRFGAVCRSWCSTVAQRPCLPKPQIPWLMLSDST 60

Query: 305 ADPDAFDFSSIY*QKLHTIHLPEIRHKRCIGSFKNGWVIIFDKM 174
           +DPD   F S   QK++ IHL EI  + CIGS   GW+I  D++
Sbjct: 61  SDPDTRRFFSRLDQKMYKIHLLEIHGRLCIGS-SEGWLITVDEL 103


>ref|XP_010909847.1| PREDICTED: putative F-box protein At4g22660 [Elaeis guineensis]
          Length = 381

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
 Frame = -3

Query: 470 SNWVLVDLPKALVERISDLCLPPDYIRMQSVCKLWQLILKNRR---QYELPWLMMQNE-A 303
           +NW    LP  L   I       DY+R   VC+ W   +  R    + ++PWLM+ +  +
Sbjct: 4   NNWAA--LPPELQALILGRLEVADYLRFGVVCRSWCSTVAQRPCLPKPQIPWLMLSDSTS 61

Query: 302 DPDAFDFSSIY*QKLHTIHLPEIRHKRCIGSFKNGWVIIFDKM 174
           DPD   F S   +K++ IHLPEI  + CIGS   GW+I  D++
Sbjct: 62  DPDTRRFFSRPDRKMYKIHLPEIHGRLCIGS-SEGWLITVDEL 103


>ref|XP_010909848.1| PREDICTED: F-box protein At2g05970-like [Elaeis guineensis]
          Length = 194

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
 Frame = -3

Query: 461 VLVDLPKALVERISDLCLPPDYIRMQSVCKLWQLILKNRR---QYELPWLMMQN-EADPD 294
           +L +LP  ++ R+       DY+R  SVC+ W   +  R    + ++PWLM+ + + DPD
Sbjct: 6   LLPELPVLILGRLE----MADYLRFGSVCRSWCFTVAQRPCPPKPQIPWLMLSDSKRDPD 61

Query: 293 AFDFSSIY*QKLHTIHLPEIRHKRCIGSFKNGWVIIFDKM 174
              F S   QK++ I LPEI  + C+GS   GW+I  D++
Sbjct: 62  TRCFFSRPDQKMYEIQLPEIHGRLCVGS-SEGWLITVDEI 100


>ref|XP_010910511.1| PREDICTED: probable F-box protein At4g22060, partial [Elaeis
           guineensis]
          Length = 151

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = -3

Query: 473 MSNWVLVDLPKALVERISDLCLPPDYIRMQSVCKLWQLILKNRR---QYELPWLMMQNEA 303
           ++NW    LP  L   I       DY+R  +VC+ W   +  R    + ++PWLM+ +  
Sbjct: 3   LNNWAA--LPLELQALILGRLEVTDYLRFGAVCRSWCSTVAERPCLPKPQIPWLMLSDSM 60

Query: 302 -DPDAFDFSSIY*QKLHTIHLPEIRHKRCIGSFKNGWVIIFDK 177
            DPD   F S   QK++ IHLP I  + CIGS   GW+I  D+
Sbjct: 61  RDPDTRRFFSRPHQKMYKIHLPAIHGRLCIGS-SEGWLITVDE 102


>ref|XP_010905853.1| PREDICTED: F-box protein At2g17036-like [Elaeis guineensis]
          Length = 419

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
 Frame = -3

Query: 401 DYIRMQSVCKLWQLILKNRR---QYELPWLMMQNEA-DPDAFDFSSIY*QKLHTIHLPEI 234
           DY+R  +VC+ W   +  R    + ++PWLM+ +   DPD   F S   QK++ IHLPEI
Sbjct: 22  DYLRFAAVCRSWCSTVAERPCLPKPQIPWLMLSDSTRDPDTRRFFSRPDQKMYKIHLPEI 81

Query: 233 RHKRCIGSFKNGWVIIFDKM 174
             + CIGS   GW+   D++
Sbjct: 82  HGRGCIGS-SEGWLFTTDEV 100


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