BLASTX nr result
ID: Cinnamomum25_contig00012514
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00012514
(2983 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme... 1410 0.0
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 1372 0.0
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 1370 0.0
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1365 0.0
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1363 0.0
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1363 0.0
ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1360 0.0
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1360 0.0
ref|XP_010917517.1| PREDICTED: probable RNA-dependent RNA polyme... 1358 0.0
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme... 1358 0.0
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme... 1356 0.0
ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1355 0.0
ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1355 0.0
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme... 1348 0.0
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 1343 0.0
gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gos... 1341 0.0
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 1338 0.0
ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polyme... 1332 0.0
ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [G... 1330 0.0
ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polyme... 1327 0.0
>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962527|ref|XP_010275424.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962530|ref|XP_010275500.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962533|ref|XP_010275583.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962536|ref|XP_010275643.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962539|ref|XP_010275710.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
Length = 1136
Score = 1410 bits (3650), Expect = 0.0
Identities = 696/996 (69%), Positives = 817/996 (82%), Gaps = 4/996 (0%)
Frame = -2
Query: 2979 NLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQ 2800
+LEHT LH GCQVS +KFS LW ADV V F FGLR+L FFLS ++YKL L YE+IWQ
Sbjct: 98 SLEHTTLHFGCQVSPEKFSVLWKGADVAVRFEFGLRRLHFFLSQFPIDYKLGLSYENIWQ 157
Query: 2799 IQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTP 2620
IQL R Q+KKFLLIQ+ PRI+KK S +N+F+ P LNYFR+ DDQW R DFTP
Sbjct: 158 IQLRHPRGQNKKFLLIQMFGVPRIFKKVKISLENMFEDPILNYFREP-DDQWDRTTDFTP 216
Query: 2619 LCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQR 2440
LCCIGQ S LCLE+PY LP+IRE F YYKE+EG F+LE G++F R L LVPIV P Q
Sbjct: 217 LCCIGQSSALCLELPYSYVLPNIREYFAYYKEDEGPFVLESGATFSRSLSLVPIVGPSQG 276
Query: 2439 IRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEP 2260
+PY+ILFKV SLVQNG + GPTLD FF LV+P I DYIE+ALE L +LKE C+EP
Sbjct: 277 SDIPYEILFKVCSLVQNGCLSGPTLDAAFFRLVDPNFISIDYIENALEKLYHLKECCYEP 336
Query: 2259 ARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFS 2080
WL +QY Y R P+L +ISLD GLVY+ R Q+TP K+YFCGPEV VSNRVLRE+S
Sbjct: 337 VNWLTKQYRAYCTLKRPPKLPSISLDDGLVYVRRIQITPCKVYFCGPEVIVSNRVLREYS 396
Query: 2079 DDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEF 1900
I+NFIRISFVDE+ DK+ S D+ PR ++ + HT IY RILSTL+ GIVIG+KKF+F
Sbjct: 397 RYIDNFIRISFVDEDLDKIHSTDISPRTSFANEKGHTEIYDRILSTLKNGIVIGDKKFDF 456
Query: 1899 LAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTV 1720
LAFSSSQLR+NSAWMFAS +G TAA IR+WMGDFS+I+NVAKYAARLGQSF SS+ETL V
Sbjct: 457 LAFSSSQLRDNSAWMFASSNGYTAASIRQWMGDFSKIRNVAKYAARLGQSFSSSRETLNV 516
Query: 1719 MKHEIEIIPDIETESR--KYNFSDGIGKISANFARRVALKCDLN-STPSAFQIRYGGYKG 1549
+HE EII DI+ E R +Y FSDGIGKISA+FA++VA KC S PSAFQIRYGGYKG
Sbjct: 517 YEHETEIIDDIKVEWRGIEYIFSDGIGKISADFAKQVAKKCGFKGSFPSAFQIRYGGYKG 576
Query: 1548 VVAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFE 1369
VVA+DP S KLSLR+SM KY+S N KLDVLSWSKYQPC+LNRQ+ITLLSTLGV+D FE
Sbjct: 577 VVAVDPTSTKKLSLRRSMSKYESRNTKLDVLSWSKYQPCFLNRQIITLLSTLGVRDSIFE 636
Query: 1368 RKQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFR 1189
+KQ+EA+DQLD +LTDS++AQEALE+MSPGEN +LKEMLLCGY+P+ EPFLSM LQTFR
Sbjct: 637 KKQKEAMDQLDAILTDSLKAQEALEIMSPGENTNILKEMLLCGYEPNAEPFLSMMLQTFR 696
Query: 1188 ASKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTR 1009
ASKL ELRTKTRIF+P GRS++GCLDETRTL+YG+VFV +SS GR+ F + L +F G
Sbjct: 697 ASKLLELRTKTRIFVPNGRSLLGCLDETRTLKYGEVFVQVSSIGRRQFHESSLFVFSGNE 756
Query: 1008 LDESVVLV-GKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGS 832
++ +V GK+ VAKNPCLHPGDVR+LQAV+V ALHHMVDCV+FPQ+G+RPHPNECSGS
Sbjct: 757 PEQQKFIVEGKIIVAKNPCLHPGDVRLLQAVNVPALHHMVDCVVFPQEGKRPHPNECSGS 816
Query: 831 DLDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIA 652
DLDGD+YFV WDPDLIP RQ+ PMEY+P + LDHDV IEE+EEYFTNY+VN+SLG+IA
Sbjct: 817 DLDGDVYFVCWDPDLIPPRQIQPMEYLPEPSVNLDHDVTIEEIEEYFTNYIVNESLGIIA 876
Query: 651 NAHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKP 472
NAHT FADKEP+ AESD+C +LAKLFSIAVDFPKTGVPAEIP HL+VKE PDFMEK DKP
Sbjct: 877 NAHTAFADKEPKKAESDACLQLAKLFSIAVDFPKTGVPAEIPQHLYVKEYPDFMEKLDKP 936
Query: 471 NYQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQY 292
Y S+RVIGKLFRA+KD+AP T I+SFT+EVAR+SYDPDMEVDGFEDY+ DA ++K +Y
Sbjct: 937 TYVSERVIGKLFRAVKDIAPQTWSIRSFTQEVARRSYDPDMEVDGFEDYLSDAYYYKGEY 996
Query: 291 DLKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGS 112
D KLGNLMDYYGIKTE E+LSG+I+K+SKSF+K+ DAEAISLAVRSL+KE R WFNEK S
Sbjct: 997 DSKLGNLMDYYGIKTEAEILSGNIMKLSKSFTKKRDAEAISLAVRSLRKEARAWFNEK-S 1055
Query: 111 QTDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
P+ DD YAKASAWYHVTYHP+YWG YNEG+KR
Sbjct: 1056 GPGPEA-DDVYAKASAWYHVTYHPDYWGCYNEGLKR 1090
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 1372 bits (3552), Expect = 0.0
Identities = 677/994 (68%), Positives = 789/994 (79%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E LH GCQVS++KF LW DV VNFG G+RKL F LSHH +EY+L+LFYE+IWQI
Sbjct: 96 MEGVTLHFGCQVSNEKFYVLWEEVDVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQI 155
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L R R Q+ K+LLIQ+ APRIY+K S +F++P LNYF D DDQW+R DFT
Sbjct: 156 ELHRPRNQTSKYLLIQLFGAPRIYEKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQS 215
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
CIGQ S LCLE+PY+ +LP+ RENF YYKE+EG+F+LE GSS+ R L+LVPIV P I
Sbjct: 216 SCIGQSSVLCLELPYYLQLPNFRENFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGI 275
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LPY+ILFK+N LVQNG I GP LD F+ LVNPC ID YI+HALE L LKE CFEP+
Sbjct: 276 DLPYEILFKINLLVQNGCIPGPALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPS 335
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
+WL +QY Y S + P ISLD GLV + R Q+TP+++YFCGPE+NVSNRVLR F D
Sbjct: 336 KWLLEQYKGYIASKKNPGSPVISLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHD 395
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
DI+NF+RI+FVDEE +K+ S DL+ R R ++ IY RILSTL+ GIVIG+K+FEFL
Sbjct: 396 DIDNFLRITFVDEELEKIHSTDLLTRNRITE------IYGRILSTLKNGIVIGDKQFEFL 449
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLRENSAWMFASR GLTAADIR WMG+FS+I+NVAKYAARLGQSF SS ETL+V
Sbjct: 450 AFSSSQLRENSAWMFASREGLTAADIRTWMGEFSKIRNVAKYAARLGQSFSSSTETLSVA 509
Query: 1716 KHEIEIIPDIET--ESRKYNFSDGIGKISANFARRVALKCDLNS-TPSAFQIRYGGYKGV 1546
K EIEII D+E + Y FSDGIGKISA FA++VA KC LN TPSAFQIR GG+KGV
Sbjct: 510 KDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKKVAAKCRLNGRTPSAFQIRIGGFKGV 569
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VA+DP S KLSLR SM KY+SEN KLDVL+WSKYQPC+LNRQLITLLSTLGV DHAFE
Sbjct: 570 VAVDPTSSKKLSLRGSMSKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDHAFEE 629
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+E VDQL+ +LTD ++AQEALE+MSPGEN +LKEMLLCGY+PD EPFLSM LQTFRA
Sbjct: 630 KQREVVDQLNAILTDPLKAQEALELMSPGENTNILKEMLLCGYEPDAEPFLSMMLQTFRA 689
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL ELRTK+RIF+ GRSMMGCLDETRTL+YGQVFV +S G+R
Sbjct: 690 SKLLELRTKSRIFVANGRSMMGCLDETRTLDYGQVFVQVS----------------GSRS 733
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
++ ++ GKV VAKNPCLHPGDVRVL AV+V LHHMVDCV+FPQKG RPHPNECSGSDL
Sbjct: 734 EQRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVDCVVFPQKGSRPHPNECSGSDL 793
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGDIYFV WDP+LIPS+Q+PPM+Y PA + L+H+V IEEVEEYFTNY+VNDSLG+IANA
Sbjct: 794 DGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEEVEEYFTNYIVNDSLGIIANA 853
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HTVFAD+EPR A S C LAKLFSIAVDFPKTGVPAEIP L VKE PDFMEKPDKP Y
Sbjct: 854 HTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPTY 913
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
QS VIGKLFR +KD+AP I+S TRE + YDPDMEVDG+EDY++DA + K YD
Sbjct: 914 QSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDPDMEVDGYEDYVDDAFYHKSNYDY 973
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLM+YYGIKTE E+LSG I+KMS+SF+K+ DAEAI +AVRSL+KE R WFNEKG+
Sbjct: 974 KLGNLMEYYGIKTEAEILSGGIMKMSRSFTKQRDAEAIGVAVRSLRKEARSWFNEKGNGL 1033
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D + DD YAKASAWYHVTYHP+YWG YNEGM R
Sbjct: 1034 DSEA-DDLYAKASAWYHVTYHPSYWGLYNEGMNR 1066
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 1370 bits (3547), Expect = 0.0
Identities = 675/994 (67%), Positives = 787/994 (79%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E LH G Q S +KFS +W +V VNFG G+RKL FFLSH+ EYKL L +E+IWQI
Sbjct: 97 MESVTLHFGYQTSKEKFSAVWSGNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQI 156
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L R R Q+ K+LLIQ+ APRIY++ PS N+F+ P LNYFRD D+QW+R DFTP
Sbjct: 157 ELHRPRGQTVKYLLIQLYGAPRIYERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPS 216
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
C IG S+LCLE+P H +LP+ ENF YYKENEG F+LE G +F R DLVPIV P +
Sbjct: 217 CGIGHSSSLCLELPNHLQLPNFNENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGV 276
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LPY ILF+VN LVQNG + G LDD F+ LV+P + IE+ALE L +LKE C+EP+
Sbjct: 277 NLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPS 336
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
+W +QY KY S PR +SLD+GLVY+++ Q+TP K++FCGPEVNVSNRVLR++ +
Sbjct: 337 KWFNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYRE 396
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
DI+NF+R+SFVDEE +K+ S D+ PR S + + T IY RILSTL+ GIVIG+KKFEFL
Sbjct: 397 DIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFL 456
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLRENS WMFASR GLTAADIR WMG F +I+NVA+YAARLGQSFGSS ETL+V
Sbjct: 457 AFSSSQLRENSCWMFASRLGLTAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVS 516
Query: 1716 KHEIEIIPDIETE--SRKYNFSDGIGKISANFARRVALKCDLNS-TPSAFQIRYGGYKGV 1546
HEIEIIPDIE +Y FSDGIGKISA FAR+VA+KC TPSAFQIRY GYKGV
Sbjct: 517 SHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGV 576
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VA+DP S KLSLR+SM KY+SEN KLDVL+ SKYQPC+LNRQLITLLSTLGV DH FER
Sbjct: 577 VAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFER 636
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+EAVDQLD MLTD +RAQEALE+MSPGEN +LKEMLLCGY+PD EPFLSM LQTFRA
Sbjct: 637 KQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRA 696
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL ELRTKTRIFIP GRSMMGCLDETRTLE+GQVFV S + ++ +D DMF
Sbjct: 697 SKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDSS-DMFSERGR 755
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
+ ++ G V VAKNPCLHPGD+R+L+AVDV ALHHMVDCV+FPQKG RPHPNECSGSDL
Sbjct: 756 GQCYLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDL 815
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGDIYFV WDP+LIPS+Q+ PM+Y P LDHDV IEEVEEYFTNY+VNDSLGVIANA
Sbjct: 816 DGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANA 875
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HT ADKE A S+ C ELA+ FSIAVDFPKTGVPAEIPS+L +E PDFMEKPDKP+Y
Sbjct: 876 HTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSY 935
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
+S+ VIGKLFR +KD+AP T I+SFT +VAR+ YDPDMEVDGFEDYI+DA ++K YD
Sbjct: 936 ESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDY 995
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLM+YYGIKTE E+LSGS +KMSKSF+K+ DAEAI +AVRSLKKE R WFNEKGS
Sbjct: 996 KLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGL 1055
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D DD AKASAWYHVTYH NYWG YNEGM R
Sbjct: 1056 DSQA-DDVDAKASAWYHVTYHHNYWGCYNEGMNR 1088
>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
euphratica]
Length = 1132
Score = 1365 bits (3532), Expect = 0.0
Identities = 671/994 (67%), Positives = 787/994 (79%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E LH G Q S +KFS +W +V VNFG G+RKL FFLSH+ EYKL L +E+IWQI
Sbjct: 97 MESVTLHFGYQTSKEKFSAVWSGNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQI 156
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L R R Q+ K+LLIQ+ APRIY++ PS N+F+ P LNYFRD D+QW+R DFTP
Sbjct: 157 ELHRPRGQTVKYLLIQLYGAPRIYEREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPS 216
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
C IG S+LCLE+P H +LP+ ENF YYKENEG F+LE GS+F R DLVPIV P +
Sbjct: 217 CSIGHSSSLCLELPSHLQLPNFNENFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGV 276
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LPY ILF+VN LVQNG + G LDD F+ LV+P + IEHALE L +LKE C+EP+
Sbjct: 277 NLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPS 336
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
+W +QY KY S PR +SLD+GLVY+++ Q+TP K++FCGPEVN+SNRVLR++ +
Sbjct: 337 KWFNEQYRKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLE 396
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
+I+NF+R+SFVDEE +K+ S D+ PR S + + T IY RILSTLR GIVIG+KKFEFL
Sbjct: 397 EIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLRNGIVIGDKKFEFL 456
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLRENS WMFASR GLTAADIRRWMG F +I+NVA+YAARLGQSF SS ETL+V
Sbjct: 457 AFSSSQLRENSCWMFASRLGLTAADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVS 516
Query: 1716 KHEIEIIPDIETE--SRKYNFSDGIGKISANFARRVALKCDLNS-TPSAFQIRYGGYKGV 1546
+HEIEII DIE +Y FSDGIGKISA FAR+VA+KC TPSAFQIRY GYKGV
Sbjct: 517 RHEIEIISDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGV 576
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VA+DP S KLSLR SM KY+SEN KLDVL+ SKYQPC+LNRQLITLLSTLGV DH FER
Sbjct: 577 VAVDPTSTKKLSLRMSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFER 636
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+EAVDQLD +LTD +RAQEAL +MSPGEN +LKEMLLCGY+PD EPFLSM LQTFRA
Sbjct: 637 KQREAVDQLDAILTDPLRAQEALVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRA 696
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL ELRTKTRIFIP GR MMGCLDETRTLE+GQVFV S + ++ +D D+F
Sbjct: 697 SKLLELRTKTRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDSS-DVFSERGR 755
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
+ ++ G V VAKNPCLHPGDVR+L+AVDV ALHHMVDCV+FPQKG RPHPN+CSGSDL
Sbjct: 756 GQCYLIEGSVVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPNQCSGSDL 815
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGDIYFV WDP+LIPS+Q+ PM+Y P LDHDV IEEVEEYFTNY+VNDSLG+IANA
Sbjct: 816 DGDIYFVCWDPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANA 875
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HT FADKE A S+ C ELA+ FSIAVDFPKTGVPAEIPS+L V+E PDFMEKPDKP+Y
Sbjct: 876 HTAFADKESLKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSY 935
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
+S+ VIGKLFR +KD+AP T I+SFT +VAR+ YDPDMEVDGFEDYI+DA ++K YD
Sbjct: 936 ESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDY 995
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLM+YYGIKTE E+LSGS +KMSKSF+K+ DAEAI +AVRSL+KE R WFNEKGS
Sbjct: 996 KLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGL 1055
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D DD AKASAWYHVTYH NYWG YNEGM R
Sbjct: 1056 DSQA-DDVDAKASAWYHVTYHHNYWGCYNEGMNR 1088
>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
euphratica]
Length = 1132
Score = 1363 bits (3529), Expect = 0.0
Identities = 671/994 (67%), Positives = 786/994 (79%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E LH G Q S +KFS +W +V VNFG G+RKL FFLSH+ EYKL L +E+IWQI
Sbjct: 97 MESVTLHFGYQTSKEKFSAVWSGNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQI 156
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L R R Q+ K+LLIQ+ APRIY++ PS N+F+ P LNYFRD D+QW+R DFTP
Sbjct: 157 ELHRPRGQTVKYLLIQLYGAPRIYEREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPS 216
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
C IG S+LCLE+P H +LP+ ENF YYKENEG F+LE GS+F R DLVPIV P +
Sbjct: 217 CSIGHSSSLCLELPSHLQLPNFNENFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGV 276
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LPY ILF+VN LVQNG + G LDD F+ LV+P + IEHALE L +LKE C+EP+
Sbjct: 277 NLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVRCIEHALEKLYHLKECCYEPS 336
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
+W +QY KY S PR +SLD+GLVY+++ Q+TP K++FCGPEVN+SNRVLR++ +
Sbjct: 337 KWFNEQYRKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLE 396
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
+I+NF+R+SFVDEE +K+ S D+ PR S + + T IY RILSTLR GIVIG+KKFEFL
Sbjct: 397 EIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYNRILSTLRNGIVIGDKKFEFL 456
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLRENS WMFASR GLTAADIRRWMG F +I+NVA+YAARLGQSF SS ETL+V
Sbjct: 457 AFSSSQLRENSCWMFASRLGLTAADIRRWMGSFHQIRNVARYAARLGQSFSSSTETLSVS 516
Query: 1716 KHEIEIIPDIETE--SRKYNFSDGIGKISANFARRVALKCDLNS-TPSAFQIRYGGYKGV 1546
+HEIEII DIE +Y FSDGIGKISA FAR+VA+KC TPSAFQIRY GYKGV
Sbjct: 517 RHEIEIISDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGV 576
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VA+DP S KLSLR SM KY+SEN KLDVL+ SKYQPC+LNRQLITLLSTLGV DH FER
Sbjct: 577 VAVDPTSTKKLSLRMSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFER 636
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+EAVDQLD +LTD +RAQEAL +MSPGEN +LKEMLLCGY+PD EPFLSM LQTFRA
Sbjct: 637 KQREAVDQLDAILTDPLRAQEALVLMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRA 696
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL ELRTKTRIFIP GR MMGCLDETRTLE+GQVFV S + ++ +D D+F
Sbjct: 697 SKLLELRTKTRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDSS-DVFSERGR 755
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
+ ++ G V VAKNPCLHPGDVR+L+AVDV ALHHMVDCV+FPQKG RPHP ECSGSDL
Sbjct: 756 GQCYLIEGSVVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPKECSGSDL 815
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGDIYFV WDP+LIPS+Q+ PM+Y P LDHDV IEEVEEYFTNY+VNDSLG+IANA
Sbjct: 816 DGDIYFVCWDPELIPSQQISPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANA 875
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HT FADKE A S+ C ELA+ FSIAVDFPKTGVPAEIPS+L V+E PDFMEKPDKP+Y
Sbjct: 876 HTAFADKESLKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSY 935
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
+S+ VIGKLFR +KD+AP T I+SFT +VAR+ YDPDMEVDGFEDYI+DA ++K YD
Sbjct: 936 ESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDY 995
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLM+YYGIKTE E+LSGS +KMSKSF+K+ DAEAI +AVRSL+KE R WFNEKGS
Sbjct: 996 KLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGL 1055
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D DD AKASAWYHVTYH NYWG YNEGM R
Sbjct: 1056 DSQA-DDVDAKASAWYHVTYHHNYWGCYNEGMNR 1088
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 1363 bits (3529), Expect = 0.0
Identities = 669/996 (67%), Positives = 797/996 (80%), Gaps = 5/996 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+EH LH GC++S++KF+ LW +V VNFGFG+RK++F LSH G EY+LEL YE+IW+I
Sbjct: 99 MEHIELHFGCKISNEKFAVLWRGVNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEI 158
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L R Q K+LLIQ+ APRI++K S D +++SP N+F++ DDQW+R DFTP
Sbjct: 159 ELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPS 218
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
IGQ + LC+E+PY +LPD +ENF YYKE+E +F+LE GS++ R LDLVPIV P I
Sbjct: 219 NFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGI 278
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNP--CSIDNDYIEHALEILSNLKETCFE 2263
LPY+ILFK+N LVQNG + GP LD F+ LV+P + IEHAL+ L +LKE C+E
Sbjct: 279 ALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYE 338
Query: 2262 PARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREF 2083
P+RWL QY KY S +P ISLD GLVY+HR QVTP+++YFCGPE+NVSNRVLR F
Sbjct: 339 PSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHF 398
Query: 2082 SDDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFE 1903
DI+NF+RISF+DE+ DK+ S DL PR S+ T IY RILSTLR GI+IG++KFE
Sbjct: 399 RRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFE 458
Query: 1902 FLAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLT 1723
FLAFSSSQLRE+SAWMFASR GLTAA+IR WMG+F EI+NVAKYAARLGQSF SSKETL+
Sbjct: 459 FLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLS 518
Query: 1722 VMKHEIEIIPDIETE--SRKYNFSDGIGKISANFARRVALKCDL-NSTPSAFQIRYGGYK 1552
V EIEIIPD++ E KY FSDGIGK+SA FAR+VA KC L ++ PSAFQIRYGGYK
Sbjct: 519 VHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYK 578
Query: 1551 GVVAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAF 1372
GVVA DP S KLSLR SM KY+SE KLDVL+WSKYQPC+LNRQLI+LLSTLG+ D F
Sbjct: 579 GVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIF 638
Query: 1371 ERKQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTF 1192
E+KQ+EAV QLD +LTD ++AQEALE+MSPGEN +LKE+L+CGYKPD EPFLSM LQTF
Sbjct: 639 EKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTF 698
Query: 1191 RASKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGT 1012
RASKL ELRTKTRIFIP GRSMMGCLDETRTL YGQVFV IS AG + + +F +
Sbjct: 699 RASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGES-SLFSSS 757
Query: 1011 RLDESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGS 832
R + ++ G V VAKNPCLHPGDVRVL+AV+V ALHHMVDCV+FPQKG RPHPNECSGS
Sbjct: 758 RSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGS 817
Query: 831 DLDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIA 652
DLDGDIYFV WD +LIP +Q PPM+Y PA + LDHDV+IE+VEEYFTNY+VNDSLG+IA
Sbjct: 818 DLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIA 877
Query: 651 NAHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKP 472
NAHTVFAD+EP A S+ C +LA+ FSIAVDFPKTGVPAEIP HL+VKE PDFMEKPDKP
Sbjct: 878 NAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKP 937
Query: 471 NYQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQY 292
Y+S+ VIGKLFRA+KD+AP T I+ FT+EVAR+SYDPDMEVDGFED+I+DA++ K Y
Sbjct: 938 TYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNY 997
Query: 291 DLKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGS 112
D KLGNLMDYYGIKTE E+L+GSI+KMSKSF+KR DAEAI +AVR+L+KE R WF EK
Sbjct: 998 DYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKSG 1057
Query: 111 QTDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D +DDAYAKASAWYHVTYHP+YWG YN GM R
Sbjct: 1058 S---DTEDDAYAKASAWYHVTYHPDYWGCYNHGMNR 1090
>ref|XP_012072321.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596568|ref|XP_012072322.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596570|ref|XP_012072324.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas]
Length = 1127
Score = 1360 bits (3520), Expect = 0.0
Identities = 664/995 (66%), Positives = 792/995 (79%), Gaps = 3/995 (0%)
Frame = -2
Query: 2979 NLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQ 2800
+++H LH GCQ+S +KFS LW +V VNFGFG+RKL FFLSH + YKLEL YE++WQ
Sbjct: 96 SMDHITLHFGCQISKEKFSVLWTGTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQ 155
Query: 2799 IQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTP 2620
++L R +S K+LLIQ+ APRI++K ++ N+F+ P N +DT D+QW+R +DFTP
Sbjct: 156 MELHCPRGRSVKYLLIQLYGAPRIFEKEIATF-NVFEIPLFNDLKDTPDEQWVRTIDFTP 214
Query: 2619 LCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQR 2440
C IG S LCLE P +P +ENF YYKE+EG F+LE G++F R LDLVPIV P
Sbjct: 215 FCLIGHSSGLCLEFPSSINVPKFQENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSG 274
Query: 2439 IRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEP 2260
+ LP++ILF+VN LVQNG + G LD F+ LV+P +++ D IEHAL+ L +LKE C++P
Sbjct: 275 VDLPFEILFRVNLLVQNGCLPGSALDSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDP 334
Query: 2259 ARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFS 2080
+RWL +QY KY S PR +ISL SGLVY+ R Q+TP K+YFCGPEVNVSNRV+R +S
Sbjct: 335 SRWLDEQYRKYLKSKCHPRSPSISLGSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRHYS 394
Query: 2079 DDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEF 1900
DI NF+R+SFVDEE +K+ S DL PRA S +G++ T IYKRILSTL+ GIVIG K+FEF
Sbjct: 395 KDINNFLRVSFVDEELEKIYSTDLCPRASSGNGDRRTAIYKRILSTLQNGIVIGNKRFEF 454
Query: 1899 LAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTV 1720
LAFSSSQLRENS WMFASR GLTAADIR WMG+F +I+NVAKYAARLGQSFGSS ETL+V
Sbjct: 455 LAFSSSQLRENSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSV 514
Query: 1719 MKHEIEIIPDIETES--RKYNFSDGIGKISANFARRVALKCDLNST-PSAFQIRYGGYKG 1549
++EIEI+PD+E E KY FSDGIGKISA FARRVALKC PSAFQIRYGGYKG
Sbjct: 515 SRNEIEILPDVEVERGRTKYLFSDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKG 574
Query: 1548 VVAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFE 1369
VVA+DP S KLSLR+SMCKY+SEN KLDVL +SKYQPC+LNRQ+ITLLSTLGV DH FE
Sbjct: 575 VVAVDPTSSKKLSLRESMCKYESENTKLDVLGYSKYQPCFLNRQMITLLSTLGVADHIFE 634
Query: 1368 RKQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFR 1189
+KQ+EAVDQLD +LT+S+RAQEAL++MSPGE +L EMLLCGY+PD EPFLSM LQ FR
Sbjct: 635 KKQREAVDQLDAILTNSLRAQEALDLMSPGETTNILNEMLLCGYQPDAEPFLSMMLQMFR 694
Query: 1188 ASKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTR 1009
ASKL +LRTK+RIF+P GRSMMGCLDETR LEYGQVFV S + K +D M G
Sbjct: 695 ASKLLDLRTKSRIFVPNGRSMMGCLDETRNLEYGQVFVQFSGSKHKQVYDSST-MVGGIG 753
Query: 1008 LDESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSD 829
V+ G V VAKNPCLHPGD+RVL+AV+V LHHMVDCV+FPQKG RPHPNECSGSD
Sbjct: 754 SGNGFVIEGMVIVAKNPCLHPGDIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSD 813
Query: 828 LDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIAN 649
LDGDIYFV WDPDLIP +Q+PPM+Y P + LDHDV I+EV EYFTNY++NDSLG+I+N
Sbjct: 814 LDGDIYFVCWDPDLIPRQQLPPMDYTPQPSLQLDHDVTIQEVAEYFTNYILNDSLGIISN 873
Query: 648 AHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPN 469
AHTVFAD+EP A S C ELA FSIAVDFPKTGVPAEI SHL VKE PDFMEKPDKP
Sbjct: 874 AHTVFADREPEKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPT 933
Query: 468 YQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYD 289
Y+S+ VIGKLFRA++D+AP T I+SFT EVAR+ YDPDMEVDGFEDYI+DA ++K YD
Sbjct: 934 YESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTNYD 993
Query: 288 LKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQ 109
KLGN MDYYGI+TE E+L GSI+KMSK+F+K+ DAEAI LAVRSL+KE R WF E+GS
Sbjct: 994 YKLGNHMDYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGSG 1053
Query: 108 TDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D + +DD YAKASAW++VTYHP+YWG YNEGM R
Sbjct: 1054 LDSE-EDDVYAKASAWHYVTYHPSYWGRYNEGMNR 1087
>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1144
Score = 1360 bits (3520), Expect = 0.0
Identities = 664/995 (66%), Positives = 792/995 (79%), Gaps = 3/995 (0%)
Frame = -2
Query: 2979 NLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQ 2800
+++H LH GCQ+S +KFS LW +V VNFGFG+RKL FFLSH + YKLEL YE++WQ
Sbjct: 113 SMDHITLHFGCQISKEKFSVLWTGTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQ 172
Query: 2799 IQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTP 2620
++L R +S K+LLIQ+ APRI++K ++ N+F+ P N +DT D+QW+R +DFTP
Sbjct: 173 MELHCPRGRSVKYLLIQLYGAPRIFEKEIATF-NVFEIPLFNDLKDTPDEQWVRTIDFTP 231
Query: 2619 LCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQR 2440
C IG S LCLE P +P +ENF YYKE+EG F+LE G++F R LDLVPIV P
Sbjct: 232 FCLIGHSSGLCLEFPSSINVPKFQENFSYYKESEGIFVLENGNAFSRNLDLVPIVGPPSG 291
Query: 2439 IRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEP 2260
+ LP++ILF+VN LVQNG + G LD F+ LV+P +++ D IEHAL+ L +LKE C++P
Sbjct: 292 VDLPFEILFRVNLLVQNGCLPGSALDSSFYELVDPSTMNIDCIEHALKKLFHLKECCYDP 351
Query: 2259 ARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFS 2080
+RWL +QY KY S PR +ISL SGLVY+ R Q+TP K+YFCGPEVNVSNRV+R +S
Sbjct: 352 SRWLDEQYRKYLKSKCHPRSPSISLGSGLVYMRRVQITPCKVYFCGPEVNVSNRVIRHYS 411
Query: 2079 DDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEF 1900
DI NF+R+SFVDEE +K+ S DL PRA S +G++ T IYKRILSTL+ GIVIG K+FEF
Sbjct: 412 KDINNFLRVSFVDEELEKIYSTDLCPRASSGNGDRRTAIYKRILSTLQNGIVIGNKRFEF 471
Query: 1899 LAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTV 1720
LAFSSSQLRENS WMFASR GLTAADIR WMG+F +I+NVAKYAARLGQSFGSS ETL+V
Sbjct: 472 LAFSSSQLRENSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSV 531
Query: 1719 MKHEIEIIPDIETES--RKYNFSDGIGKISANFARRVALKCDLNST-PSAFQIRYGGYKG 1549
++EIEI+PD+E E KY FSDGIGKISA FARRVALKC PSAFQIRYGGYKG
Sbjct: 532 SRNEIEILPDVEVERGRTKYLFSDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKG 591
Query: 1548 VVAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFE 1369
VVA+DP S KLSLR+SMCKY+SEN KLDVL +SKYQPC+LNRQ+ITLLSTLGV DH FE
Sbjct: 592 VVAVDPTSSKKLSLRESMCKYESENTKLDVLGYSKYQPCFLNRQMITLLSTLGVADHIFE 651
Query: 1368 RKQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFR 1189
+KQ+EAVDQLD +LT+S+RAQEAL++MSPGE +L EMLLCGY+PD EPFLSM LQ FR
Sbjct: 652 KKQREAVDQLDAILTNSLRAQEALDLMSPGETTNILNEMLLCGYQPDAEPFLSMMLQMFR 711
Query: 1188 ASKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTR 1009
ASKL +LRTK+RIF+P GRSMMGCLDETR LEYGQVFV S + K +D M G
Sbjct: 712 ASKLLDLRTKSRIFVPNGRSMMGCLDETRNLEYGQVFVQFSGSKHKQVYDSST-MVGGIG 770
Query: 1008 LDESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSD 829
V+ G V VAKNPCLHPGD+RVL+AV+V LHHMVDCV+FPQKG RPHPNECSGSD
Sbjct: 771 SGNGFVIEGMVIVAKNPCLHPGDIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSD 830
Query: 828 LDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIAN 649
LDGDIYFV WDPDLIP +Q+PPM+Y P + LDHDV I+EV EYFTNY++NDSLG+I+N
Sbjct: 831 LDGDIYFVCWDPDLIPRQQLPPMDYTPQPSLQLDHDVTIQEVAEYFTNYILNDSLGIISN 890
Query: 648 AHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPN 469
AHTVFAD+EP A S C ELA FSIAVDFPKTGVPAEI SHL VKE PDFMEKPDKP
Sbjct: 891 AHTVFADREPEKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPT 950
Query: 468 YQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYD 289
Y+S+ VIGKLFRA++D+AP T I+SFT EVAR+ YDPDMEVDGFEDYI+DA ++K YD
Sbjct: 951 YESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFEDYIDDAFYYKTNYD 1010
Query: 288 LKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQ 109
KLGN MDYYGI+TE E+L GSI+KMSK+F+K+ DAEAI LAVRSL+KE R WF E+GS
Sbjct: 1011 YKLGNHMDYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVRSLRKEARSWFKERGSG 1070
Query: 108 TDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D + +DD YAKASAW++VTYHP+YWG YNEGM R
Sbjct: 1071 LDSE-EDDVYAKASAWHYVTYHPSYWGRYNEGMNR 1104
>ref|XP_010917517.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2 [Elaeis
guineensis] gi|743774333|ref|XP_010917518.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 isoform X2
[Elaeis guineensis]
Length = 1075
Score = 1358 bits (3516), Expect = 0.0
Identities = 676/995 (67%), Positives = 798/995 (80%), Gaps = 2/995 (0%)
Frame = -2
Query: 2982 FNLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIW 2803
F LE+ LH G VS +KFS LW A DV+VNFGF LRK+ FFLS G YK EL YESIW
Sbjct: 42 FILENATLHFGSPVSQNKFSVLWSAMDVKVNFGFNLRKIYFFLSRGGHSYKFELAYESIW 101
Query: 2802 QIQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFT 2623
+IQL R Q +FLLIQV AAP+IY+ + + + P NYF+D DDQW+R DF+
Sbjct: 102 EIQLHRSSTQHLQFLLIQVVAAPKIYELFPRNSGLLLEDPIYNYFKDPPDDQWVRTTDFS 161
Query: 2622 PLCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQ 2443
PLC IGQ S LCL++ Y LP+IR+ F++YKE+EG F LE G S+ LDLVPIVEP
Sbjct: 162 PLCSIGQSSALCLQLSYDCDLPNIRDYFVFYKESEGHFDLERGISYSCSLDLVPIVEPRP 221
Query: 2442 RIRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFE 2263
RI +PYKILFK+N +VQNG + GPTLD++FF LV+P + DYIE A+E + K + F
Sbjct: 222 RIEVPYKILFKINHMVQNGTLFGPTLDEKFFRLVSPQYVRIDYIECAIEEMYFSKSSFFN 281
Query: 2262 PARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREF 2083
PA WL ++Y+K+ S R P+ +ISLDSGLVY++R QVTP+K+YF GPEVNVSNRVLR F
Sbjct: 282 PANWLTEKYSKFKRSTRLPKSPSISLDSGLVYVYRVQVTPSKVYFYGPEVNVSNRVLRHF 341
Query: 2082 SDDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFE 1903
S+DIENFIR+SFVDE+W+KM S DL R+ S+ EKHT +Y+R LS LR GI IG K F+
Sbjct: 342 SEDIENFIRVSFVDEDWEKMHSTDLSSRSGSAGNEKHTALYRRTLSVLRNGITIGGKNFK 401
Query: 1902 FLAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLT 1723
FLAFSSSQLRENS+WMFAS LTAA IR+WMGDF EI+NVAKYAARLGQSF SS ETLT
Sbjct: 402 FLAFSSSQLRENSSWMFASNGRLTAAAIRKWMGDFHEIRNVAKYAARLGQSFSSSTETLT 461
Query: 1722 VMKHEIEIIPDIETESRKYNFSDGIGKISANFARRVALKCDL-NSTPSAFQIRYGGYKGV 1546
V KH+++ IPD+ KY FSDGIGKISA F+RRVA+KC L +STPSAFQIRYGGYKGV
Sbjct: 462 VDKHDVDDIPDV--RDGKYVFSDGIGKISAEFSRRVAIKCGLKSSTPSAFQIRYGGYKGV 519
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VA+DP S KLSLR+SM KYKS+N KLDVL++SKYQPC+LNRQLITLLSTLGV D FE
Sbjct: 520 VAVDPTSSKKLSLRESMRKYKSDNTKLDVLAYSKYQPCFLNRQLITLLSTLGVGDWIFEM 579
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+EAV++LD MLTD RA EA+E+MSPGE VLKE+LLCGYKPD EPF+SM LQTFRA
Sbjct: 580 KQEEAVNELDKMLTDPDRAWEAIELMSPGETTSVLKELLLCGYKPDSEPFISMLLQTFRA 639
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
++L EL+ K+RIFI KGR+MMGCLDETRTLEYGQVFV +S GR F ++GL M+ G+
Sbjct: 640 ARLLELKNKSRIFIQKGRAMMGCLDETRTLEYGQVFVQVSCTGRMQFHNNGLFMYGGSES 699
Query: 1005 D-ESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSD 829
D + VL GKV +AKNPCLHPGD+RVL AVDV LHHMVDCV+FPQKG+RPHPNECSGSD
Sbjct: 700 DHHTAVLKGKVVIAKNPCLHPGDIRVLSAVDVPELHHMVDCVVFPQKGKRPHPNECSGSD 759
Query: 828 LDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIAN 649
LDGDIYFVSWD DLIP R V PM+Y A +EILDHDV IEEV EYFTNY+VNDSLG+IAN
Sbjct: 760 LDGDIYFVSWDADLIPPRVVTPMDYTSAPSEILDHDVTIEEVMEYFTNYIVNDSLGIIAN 819
Query: 648 AHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPN 469
AHTVFADK+P AES+ CTELA+LFSIAVDFPKTGVPAEIP+HLHVKE PDFMEK DK
Sbjct: 820 AHTVFADKKPLKAESEECTELARLFSIAVDFPKTGVPAEIPTHLHVKEYPDFMEKLDKVT 879
Query: 468 YQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYD 289
Y+SK VIGKL+RAIKD T G I++FT+E+ARKSYDPDMEVDGFE+Y+++A FK +YD
Sbjct: 880 YESKGVIGKLYRAIKD--HTWGQIKAFTKEMARKSYDPDMEVDGFEEYLDEAFLFKGEYD 937
Query: 288 LKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQ 109
KLGNL+++YGIKTE E+LSGSI+KMSK+F+K D EAI LAVRSL+KE R WFNEK +
Sbjct: 938 FKLGNLLEHYGIKTEAEILSGSIMKMSKNFTKYKDGEAIGLAVRSLRKEARAWFNEK--R 995
Query: 108 TDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D + +DD YAKASAWYHVTYHP+YWG YNEG+ R
Sbjct: 996 IDCEDEDDVYAKASAWYHVTYHPDYWGCYNEGLNR 1030
>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Elaeis
guineensis] gi|743774329|ref|XP_010917516.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis]
Length = 1129
Score = 1358 bits (3516), Expect = 0.0
Identities = 676/995 (67%), Positives = 798/995 (80%), Gaps = 2/995 (0%)
Frame = -2
Query: 2982 FNLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIW 2803
F LE+ LH G VS +KFS LW A DV+VNFGF LRK+ FFLS G YK EL YESIW
Sbjct: 96 FILENATLHFGSPVSQNKFSVLWSAMDVKVNFGFNLRKIYFFLSRGGHSYKFELAYESIW 155
Query: 2802 QIQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFT 2623
+IQL R Q +FLLIQV AAP+IY+ + + + P NYF+D DDQW+R DF+
Sbjct: 156 EIQLHRSSTQHLQFLLIQVVAAPKIYELFPRNSGLLLEDPIYNYFKDPPDDQWVRTTDFS 215
Query: 2622 PLCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQ 2443
PLC IGQ S LCL++ Y LP+IR+ F++YKE+EG F LE G S+ LDLVPIVEP
Sbjct: 216 PLCSIGQSSALCLQLSYDCDLPNIRDYFVFYKESEGHFDLERGISYSCSLDLVPIVEPRP 275
Query: 2442 RIRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFE 2263
RI +PYKILFK+N +VQNG + GPTLD++FF LV+P + DYIE A+E + K + F
Sbjct: 276 RIEVPYKILFKINHMVQNGTLFGPTLDEKFFRLVSPQYVRIDYIECAIEEMYFSKSSFFN 335
Query: 2262 PARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREF 2083
PA WL ++Y+K+ S R P+ +ISLDSGLVY++R QVTP+K+YF GPEVNVSNRVLR F
Sbjct: 336 PANWLTEKYSKFKRSTRLPKSPSISLDSGLVYVYRVQVTPSKVYFYGPEVNVSNRVLRHF 395
Query: 2082 SDDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFE 1903
S+DIENFIR+SFVDE+W+KM S DL R+ S+ EKHT +Y+R LS LR GI IG K F+
Sbjct: 396 SEDIENFIRVSFVDEDWEKMHSTDLSSRSGSAGNEKHTALYRRTLSVLRNGITIGGKNFK 455
Query: 1902 FLAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLT 1723
FLAFSSSQLRENS+WMFAS LTAA IR+WMGDF EI+NVAKYAARLGQSF SS ETLT
Sbjct: 456 FLAFSSSQLRENSSWMFASNGRLTAAAIRKWMGDFHEIRNVAKYAARLGQSFSSSTETLT 515
Query: 1722 VMKHEIEIIPDIETESRKYNFSDGIGKISANFARRVALKCDL-NSTPSAFQIRYGGYKGV 1546
V KH+++ IPD+ KY FSDGIGKISA F+RRVA+KC L +STPSAFQIRYGGYKGV
Sbjct: 516 VDKHDVDDIPDV--RDGKYVFSDGIGKISAEFSRRVAIKCGLKSSTPSAFQIRYGGYKGV 573
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VA+DP S KLSLR+SM KYKS+N KLDVL++SKYQPC+LNRQLITLLSTLGV D FE
Sbjct: 574 VAVDPTSSKKLSLRESMRKYKSDNTKLDVLAYSKYQPCFLNRQLITLLSTLGVGDWIFEM 633
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+EAV++LD MLTD RA EA+E+MSPGE VLKE+LLCGYKPD EPF+SM LQTFRA
Sbjct: 634 KQEEAVNELDKMLTDPDRAWEAIELMSPGETTSVLKELLLCGYKPDSEPFISMLLQTFRA 693
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
++L EL+ K+RIFI KGR+MMGCLDETRTLEYGQVFV +S GR F ++GL M+ G+
Sbjct: 694 ARLLELKNKSRIFIQKGRAMMGCLDETRTLEYGQVFVQVSCTGRMQFHNNGLFMYGGSES 753
Query: 1005 D-ESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSD 829
D + VL GKV +AKNPCLHPGD+RVL AVDV LHHMVDCV+FPQKG+RPHPNECSGSD
Sbjct: 754 DHHTAVLKGKVVIAKNPCLHPGDIRVLSAVDVPELHHMVDCVVFPQKGKRPHPNECSGSD 813
Query: 828 LDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIAN 649
LDGDIYFVSWD DLIP R V PM+Y A +EILDHDV IEEV EYFTNY+VNDSLG+IAN
Sbjct: 814 LDGDIYFVSWDADLIPPRVVTPMDYTSAPSEILDHDVTIEEVMEYFTNYIVNDSLGIIAN 873
Query: 648 AHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPN 469
AHTVFADK+P AES+ CTELA+LFSIAVDFPKTGVPAEIP+HLHVKE PDFMEK DK
Sbjct: 874 AHTVFADKKPLKAESEECTELARLFSIAVDFPKTGVPAEIPTHLHVKEYPDFMEKLDKVT 933
Query: 468 YQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYD 289
Y+SK VIGKL+RAIKD T G I++FT+E+ARKSYDPDMEVDGFE+Y+++A FK +YD
Sbjct: 934 YESKGVIGKLYRAIKD--HTWGQIKAFTKEMARKSYDPDMEVDGFEEYLDEAFLFKGEYD 991
Query: 288 LKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQ 109
KLGNL+++YGIKTE E+LSGSI+KMSK+F+K D EAI LAVRSL+KE R WFNEK +
Sbjct: 992 FKLGNLLEHYGIKTEAEILSGSIMKMSKNFTKYKDGEAIGLAVRSLRKEARAWFNEK--R 1049
Query: 108 TDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D + +DD YAKASAWYHVTYHP+YWG YNEG+ R
Sbjct: 1050 IDCEDEDDVYAKASAWYHVTYHPDYWGCYNEGLNR 1084
>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera] gi|672186025|ref|XP_008812978.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
Length = 1131
Score = 1356 bits (3510), Expect = 0.0
Identities = 670/995 (67%), Positives = 801/995 (80%), Gaps = 2/995 (0%)
Frame = -2
Query: 2982 FNLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIW 2803
F LE+T +H G VS +KFS LW DV VNFGF +RK+ FFL YK EL YESIW
Sbjct: 96 FVLENTTVHFGSPVSQNKFSVLWSPKDVRVNFGFSMRKIYFFLVQGSHSYKFELAYESIW 155
Query: 2802 QIQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFT 2623
+IQL + +FLLIQV AAP++Y+ + + + + P NYF+D DDQW+R DF+
Sbjct: 156 EIQLHHSSTKYLQFLLIQVVAAPKVYELSLRNSGLLHEDPEYNYFKDLPDDQWVRTTDFS 215
Query: 2622 PLCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQ 2443
PLC IGQ S LCL++ Y LP+IR+ F +YKE EG+F LE GSS+ R LDLVPIVEP
Sbjct: 216 PLCSIGQSSALCLQLSYDCDLPNIRDYFPFYKEFEGRFDLERGSSYSRSLDLVPIVEPRP 275
Query: 2442 RIRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFE 2263
RI +PYKILFK+N +VQNG + GPTLD +FF LV+P I DYIE A+E + + K + F+
Sbjct: 276 RIEVPYKILFKINHMVQNGTLFGPTLDGKFFGLVSPQFIRIDYIECAIEEMYHSKSSFFD 335
Query: 2262 PARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREF 2083
PA WL ++Y K SLR P+ +ISLD+GLVY++R QVTP+K+YF GPEVNVSNRV+R F
Sbjct: 336 PANWLTKKYLKLKRSLRLPKSPSISLDAGLVYVYRVQVTPSKVYFYGPEVNVSNRVVRHF 395
Query: 2082 SDDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFE 1903
S+DIENF+R+SFVDE+W+KM S DL R+ S+ E HT +Y+RILS LR GI IG+KKFE
Sbjct: 396 SEDIENFVRVSFVDEDWEKMHSTDLSSRSGSAGNEMHTALYRRILSVLRNGITIGDKKFE 455
Query: 1902 FLAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLT 1723
FLAFSSSQLRENSAWMFAS LTAA IR+WMGDF EI+NVAKYAARLGQSF SS ETLT
Sbjct: 456 FLAFSSSQLRENSAWMFASNERLTAAAIRKWMGDFHEIRNVAKYAARLGQSFSSSTETLT 515
Query: 1722 VMKHEIEIIPDIETESRKYNFSDGIGKISANFARRVALKCDL-NSTPSAFQIRYGGYKGV 1546
V KH+++ IPD+ KY FSDGIGKISA FA+RVA+KC L +STPSAFQIRYGGYKGV
Sbjct: 516 VDKHDVDDIPDV--RYGKYVFSDGIGKISAEFAKRVAIKCGLKSSTPSAFQIRYGGYKGV 573
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VA+DP S KLSLR+SM KYKS+N KLDVL++SK+QPC+LNRQLITLLSTLGV+D FE
Sbjct: 574 VAVDPTSSKKLSLRESMRKYKSDNTKLDVLAYSKHQPCFLNRQLITLLSTLGVRDWIFEM 633
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+EAV+QLD +LTD +RAQEA+E+M GE VLKE+LLCGYKPD EPFLSM LQTFRA
Sbjct: 634 KQEEAVNQLDKILTDPVRAQEAIELMPSGETTSVLKELLLCGYKPDSEPFLSMVLQTFRA 693
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
S+L EL+TK+RIFIPKGR+MMGCLDET+ LEYG+VFV +S GR F ++GL ++ G+
Sbjct: 694 SRLLELKTKSRIFIPKGRAMMGCLDETKILEYGEVFVQVSCTGRMQFHNNGLFVYGGSES 753
Query: 1005 D-ESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSD 829
D + VL GKV VAKNPCLHPGD+RVL AVDV LHHMVDCV+FPQKG+RPHPNECSGSD
Sbjct: 754 DHHTAVLKGKVVVAKNPCLHPGDIRVLSAVDVPDLHHMVDCVVFPQKGKRPHPNECSGSD 813
Query: 828 LDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIAN 649
LDGDIYFVSWD DLIP R+V PM+Y A +EILDHDV IEEV EYFT+Y+VNDSLG+IAN
Sbjct: 814 LDGDIYFVSWDADLIPPREVTPMDYTSAPSEILDHDVTIEEVMEYFTDYIVNDSLGIIAN 873
Query: 648 AHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPN 469
AHTVFADKEPR AES+SC ELA+LFSIAVDFPKTGVPAEIP+HLHVKE PDFMEK DK
Sbjct: 874 AHTVFADKEPRKAESESCIELARLFSIAVDFPKTGVPAEIPTHLHVKEYPDFMEKLDKVT 933
Query: 468 YQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYD 289
Y+SK VIGKLFRAIKD G I++FT+E+A KSYDPDMEVDGF++Y+++A WFK +YD
Sbjct: 934 YESKGVIGKLFRAIKDHTSHLGQIKAFTKEMAMKSYDPDMEVDGFKEYLDEAFWFKGEYD 993
Query: 288 LKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQ 109
KLGNL+++YGIKTE E+LSGSI+KMSK+F+K D EAI LA+RSL+KE R WF+EK +
Sbjct: 994 FKLGNLLEHYGIKTEAEILSGSIMKMSKTFTKYKDGEAIGLALRSLRKEARAWFDEK--R 1051
Query: 108 TDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D + +DD YAKASAWYHVTYHP+YWG YNEG+ R
Sbjct: 1052 IDCEDEDDVYAKASAWYHVTYHPDYWGCYNEGLNR 1086
>ref|XP_012072327.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] gi|802596581|ref|XP_012072328.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas]
Length = 1126
Score = 1355 bits (3506), Expect = 0.0
Identities = 664/995 (66%), Positives = 785/995 (78%), Gaps = 3/995 (0%)
Frame = -2
Query: 2979 NLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQ 2800
+++H LH GC++S +KFS LW +V VNFGFGLRKL FFLSH ++YKL+L YE++WQ
Sbjct: 95 SMDHITLHFGCRISKEKFSVLWTGTNVSVNFGFGLRKLQFFLSHEQMDYKLDLSYENVWQ 154
Query: 2799 IQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTP 2620
I+L R +S K+LLIQ+ APRI++K S N+F+SP NYF+DT D+QW+R +DFTP
Sbjct: 155 IELHCPRGRSVKYLLIQLYGAPRIFEKEIAS-SNVFESPLFNYFKDTPDEQWVRTIDFTP 213
Query: 2619 LCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQR 2440
C IG S LCLE P +P +ENF YYKE+E F+LE G++F LDLVPIV P
Sbjct: 214 FCLIGHSSGLCLEFPSSINVPKFQENFSYYKESEAIFVLENGNAFSCNLDLVPIVGPPSG 273
Query: 2439 IRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEP 2260
+ LP++ILF+VN LVQ+G + G LD F+ LV+P ++ D IEHALE L +LKE C+EP
Sbjct: 274 VDLPFEILFRVNLLVQHGCLPGSALDSSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEP 333
Query: 2259 ARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFS 2080
+ WL +QY KY S PR +ISLD+GL Y+ R Q+TP K YFCGPEVNVSNRV+R +S
Sbjct: 334 SMWLNEQYRKYLTSKYLPRSPSISLDTGLEYVRRGQITPCKAYFCGPEVNVSNRVIRRYS 393
Query: 2079 DDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEF 1900
DI NF+R+SFVDEE K+ S DL PRA S +G++ T IY RILSTL+ GIVIG K+FEF
Sbjct: 394 KDINNFLRVSFVDEELGKIHSTDLSPRASSGNGDRRTAIYNRILSTLQNGIVIGNKRFEF 453
Query: 1899 LAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTV 1720
LAFSSSQLRENS WMFASR GLTAADIR WMG+F +I+NVAKYAARLGQSFGSS ETL+V
Sbjct: 454 LAFSSSQLRENSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSV 513
Query: 1719 MKHEIEIIPDIETES--RKYNFSDGIGKISANFARRVALKCDLNST-PSAFQIRYGGYKG 1549
+++IEI+PDIE E KY FSDGIGKISA FARRVALKC PSAFQIRYGGYKG
Sbjct: 514 RRNQIEILPDIEAERGRTKYLFSDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKG 573
Query: 1548 VVAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFE 1369
VVA+DP S KLSLRKSMCKY+SEN KLDVL +SKYQPC+LNRQ+ITLLSTLGV DH FE
Sbjct: 574 VVAVDPTSSKKLSLRKSMCKYESENTKLDVLGYSKYQPCFLNRQMITLLSTLGVPDHIFE 633
Query: 1368 RKQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFR 1189
+KQ+EAVDQLD +LT+S+RAQEAL++MSPGE +L EMLLCGY+PD EPFL+M LQ FR
Sbjct: 634 KKQREAVDQLDAILTNSLRAQEALDLMSPGETTNILNEMLLCGYQPDAEPFLAMMLQMFR 693
Query: 1188 ASKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTR 1009
ASKL ++RTK+RIF+P GRSMMGCLDETR LEYGQVFV S + K +D MF G
Sbjct: 694 ASKLLDVRTKSRIFVPNGRSMMGCLDETRNLEYGQVFVQFSGSKHKQVYDSST-MFGGIG 752
Query: 1008 LDESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSD 829
V+ G+V VAKNPCLHPGD+RVL+AV+V LHHMVDCV+FPQKG RPHPNECSGSD
Sbjct: 753 SGNRFVIEGQVIVAKNPCLHPGDIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSD 812
Query: 828 LDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIAN 649
LDGDIYFV WDPDLIP Q+PPM+Y P + LDHDV I+EV EYFTNY++NDSLG+I+N
Sbjct: 813 LDGDIYFVCWDPDLIPRLQIPPMDYTPEPSLQLDHDVTIQEVAEYFTNYILNDSLGIISN 872
Query: 648 AHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPN 469
AHTVFAD+EP A S C ELA FSIAVDFPKTGVPAEI SHL VKE PDFMEKPDKP
Sbjct: 873 AHTVFADREPAKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPT 932
Query: 468 YQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYD 289
Y+S+ VIGKLFRA++D+AP T I+SFT EVAR+ YDPDMEVDGF+DYI+DA +K YD
Sbjct: 933 YESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFKDYIDDAFDYKSNYD 992
Query: 288 LKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQ 109
KLGN MDYYGI+TE E+L GSI+KMSK+F+K+ DAEAI LAV SL KE R WFNE GS
Sbjct: 993 YKLGNHMDYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVSSLIKEARSWFNENGSG 1052
Query: 108 TDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D + +DD YAKASAWY+VTYHP YWG YNEGM R
Sbjct: 1053 LDSE-EDDVYAKASAWYYVTYHPTYWGRYNEGMNR 1086
>ref|XP_012072326.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1150
Score = 1355 bits (3506), Expect = 0.0
Identities = 664/995 (66%), Positives = 785/995 (78%), Gaps = 3/995 (0%)
Frame = -2
Query: 2979 NLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQ 2800
+++H LH GC++S +KFS LW +V VNFGFGLRKL FFLSH ++YKL+L YE++WQ
Sbjct: 119 SMDHITLHFGCRISKEKFSVLWTGTNVSVNFGFGLRKLQFFLSHEQMDYKLDLSYENVWQ 178
Query: 2799 IQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTP 2620
I+L R +S K+LLIQ+ APRI++K S N+F+SP NYF+DT D+QW+R +DFTP
Sbjct: 179 IELHCPRGRSVKYLLIQLYGAPRIFEKEIAS-SNVFESPLFNYFKDTPDEQWVRTIDFTP 237
Query: 2619 LCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQR 2440
C IG S LCLE P +P +ENF YYKE+E F+LE G++F LDLVPIV P
Sbjct: 238 FCLIGHSSGLCLEFPSSINVPKFQENFSYYKESEAIFVLENGNAFSCNLDLVPIVGPPSG 297
Query: 2439 IRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEP 2260
+ LP++ILF+VN LVQ+G + G LD F+ LV+P ++ D IEHALE L +LKE C+EP
Sbjct: 298 VDLPFEILFRVNLLVQHGCLPGSALDSSFYKLVDPSRMNIDCIEHALEKLFHLKECCYEP 357
Query: 2259 ARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFS 2080
+ WL +QY KY S PR +ISLD+GL Y+ R Q+TP K YFCGPEVNVSNRV+R +S
Sbjct: 358 SMWLNEQYRKYLTSKYLPRSPSISLDTGLEYVRRGQITPCKAYFCGPEVNVSNRVIRRYS 417
Query: 2079 DDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEF 1900
DI NF+R+SFVDEE K+ S DL PRA S +G++ T IY RILSTL+ GIVIG K+FEF
Sbjct: 418 KDINNFLRVSFVDEELGKIHSTDLSPRASSGNGDRRTAIYNRILSTLQNGIVIGNKRFEF 477
Query: 1899 LAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTV 1720
LAFSSSQLRENS WMFASR GLTAADIR WMG+F +I+NVAKYAARLGQSFGSS ETL+V
Sbjct: 478 LAFSSSQLRENSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQSFGSSTETLSV 537
Query: 1719 MKHEIEIIPDIETES--RKYNFSDGIGKISANFARRVALKCDLNST-PSAFQIRYGGYKG 1549
+++IEI+PDIE E KY FSDGIGKISA FARRVALKC PSAFQIRYGGYKG
Sbjct: 538 RRNQIEILPDIEAERGRTKYLFSDGIGKISAEFARRVALKCGHQGFYPSAFQIRYGGYKG 597
Query: 1548 VVAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFE 1369
VVA+DP S KLSLRKSMCKY+SEN KLDVL +SKYQPC+LNRQ+ITLLSTLGV DH FE
Sbjct: 598 VVAVDPTSSKKLSLRKSMCKYESENTKLDVLGYSKYQPCFLNRQMITLLSTLGVPDHIFE 657
Query: 1368 RKQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFR 1189
+KQ+EAVDQLD +LT+S+RAQEAL++MSPGE +L EMLLCGY+PD EPFL+M LQ FR
Sbjct: 658 KKQREAVDQLDAILTNSLRAQEALDLMSPGETTNILNEMLLCGYQPDAEPFLAMMLQMFR 717
Query: 1188 ASKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTR 1009
ASKL ++RTK+RIF+P GRSMMGCLDETR LEYGQVFV S + K +D MF G
Sbjct: 718 ASKLLDVRTKSRIFVPNGRSMMGCLDETRNLEYGQVFVQFSGSKHKQVYDSST-MFGGIG 776
Query: 1008 LDESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSD 829
V+ G+V VAKNPCLHPGD+RVL+AV+V LHHMVDCV+FPQKG RPHPNECSGSD
Sbjct: 777 SGNRFVIEGQVIVAKNPCLHPGDIRVLRAVNVPDLHHMVDCVVFPQKGPRPHPNECSGSD 836
Query: 828 LDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIAN 649
LDGDIYFV WDPDLIP Q+PPM+Y P + LDHDV I+EV EYFTNY++NDSLG+I+N
Sbjct: 837 LDGDIYFVCWDPDLIPRLQIPPMDYTPEPSLQLDHDVTIQEVAEYFTNYILNDSLGIISN 896
Query: 648 AHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPN 469
AHTVFAD+EP A S C ELA FSIAVDFPKTGVPAEI SHL VKE PDFMEKPDKP
Sbjct: 897 AHTVFADREPAKAMSKPCLELASKFSIAVDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPT 956
Query: 468 YQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYD 289
Y+S+ VIGKLFRA++D+AP T I+SFT EVAR+ YDPDMEVDGF+DYI+DA +K YD
Sbjct: 957 YESQNVIGKLFRAVRDIAPHTSSIKSFTLEVARQCYDPDMEVDGFKDYIDDAFDYKSNYD 1016
Query: 288 LKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQ 109
KLGN MDYYGI+TE E+L GSI+KMSK+F+K+ DAEAI LAV SL KE R WFNE GS
Sbjct: 1017 YKLGNHMDYYGIRTEAEILGGSIMKMSKAFTKKRDAEAIGLAVSSLIKEARSWFNENGSG 1076
Query: 108 TDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D + +DD YAKASAWY+VTYHP YWG YNEGM R
Sbjct: 1077 LDSE-EDDVYAKASAWYYVTYHPTYWGRYNEGMNR 1110
>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 1348 bits (3489), Expect = 0.0
Identities = 677/999 (67%), Positives = 794/999 (79%), Gaps = 7/999 (0%)
Frame = -2
Query: 2979 NLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQ 2800
+++ LH GCQ+SD++F LW A +V V FG GLRK FFLSH EYKLEL YE+IWQ
Sbjct: 96 SMDRITLHFGCQMSDERFCVLWKAINVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQ 155
Query: 2799 IQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNY-FRDTQDDQWIRAVDFT 2623
IQL R Q KFLLIQ+ AP+IY+K D P L+Y F++ DDQW+R +DFT
Sbjct: 156 IQLQHPRGQITKFLLIQLLGAPQIYEK---------DVPVLSYYFKEAPDDQWVREIDFT 206
Query: 2622 PLCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQ 2443
P C IGQ LCLE+PY +LP+ RENF YYKEN+G+FILE GSS+ L LVPI+ P Q
Sbjct: 207 PSCFIGQSFALCLELPYGSQLPNFRENFAYYKENDGKFILESGSSYSHNLHLVPILGPPQ 266
Query: 2442 RIRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFE 2263
LP++ILFK+N+LVQNG + GPTLD FF LV+P +IEHALE L +LKE C+E
Sbjct: 267 GSSLPFQILFKINTLVQNGCLSGPTLDTSFFRLVDPERFPISFIEHALEKLYHLKECCYE 326
Query: 2262 PARWLRQQYNKYAMSLRRPRLST--ISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLR 2089
P RWL +QY Y +++P + ISLD+GLVY+ R Q+TP K+YFCGPEVNVSNRVLR
Sbjct: 327 PVRWLSEQYRTY---VKKPVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLR 383
Query: 2088 EFSDDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKK 1909
+ +DI+NF+R+SF+DE +K+ S + PR S +G + TG+Y+RILS L+ GIVIG+KK
Sbjct: 384 NYPEDIDNFLRVSFLDENLEKIHSTVISPRM-SKEGRR-TGVYRRILSILQNGIVIGDKK 441
Query: 1908 FEFLAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKET 1729
F+FLAFSSSQLR+NSAWMFASR GLTAA+IR WMGDFS+I+NVAKYAARLGQSF SSKET
Sbjct: 442 FDFLAFSSSQLRDNSAWMFASRPGLTAAEIRSWMGDFSQIRNVAKYAARLGQSFSSSKET 501
Query: 1728 LTVMKHEIEIIPDIETESRK--YNFSDGIGKISANFARRVALKCDL-NSTPSAFQIRYGG 1558
L V K EIE IPDIE + Y FSDGIGKIS A RVA+KC +STPSAFQIRYGG
Sbjct: 502 LKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQIRYGG 561
Query: 1557 YKGVVAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDH 1378
YKGVVA+DP S KLSLRKSM KY+S+N LDVL+WSKYQP +LNRQLITLLSTLGVKDH
Sbjct: 562 YKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLGVKDH 621
Query: 1377 AFERKQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQ 1198
FE+KQ+ AVDQLD +L D + AQEALE+MSPGEN VLKEML+CGYKPD EPFLSM LQ
Sbjct: 622 VFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAEPFLSMMLQ 681
Query: 1197 TFRASKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFC 1018
TFRA+KL ELRTKTRIF+P GRSMMGCLDETRTLEYG+VFV IS G + F D L MF
Sbjct: 682 TFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSL-MFR 740
Query: 1017 GTRLD-ESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNEC 841
G+ ++ +L GK+ VAKNPCLHPGDVRVL AV+V LHHMVDCV+FPQKG+RPHPNEC
Sbjct: 741 GSGSHHDNFILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFPQKGKRPHPNEC 800
Query: 840 SGSDLDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLG 661
SGSDLDGDIYFV WD DLIP +Q+ PM+Y PA ++LDHDV IEEVEEYFTNY+VNDSLG
Sbjct: 801 SGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLG 860
Query: 660 VIANAHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKP 481
+IANAHTVFADKE A D CTELAKLFSIAVDFPKTGVPAEIP +L VKE PDFMEK
Sbjct: 861 IIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKA 920
Query: 480 DKPNYQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFK 301
DKP Y+S+ VIGKLFR +KD+AP +I+SFTR+VAR+SYDPDMEV GFEDY+ DA ++K
Sbjct: 921 DKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYK 980
Query: 300 EQYDLKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNE 121
+YD KLGNLMDYYGIKTE E+LSGSI++MSKSF +R DAEAI LAV+SL+KE R WFN+
Sbjct: 981 SEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNK 1040
Query: 120 KGSQTDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
GS+TD + DD YAKASAWYHVTYHP+YWG YNEGM R
Sbjct: 1041 MGSETDSEA-DDVYAKASAWYHVTYHPDYWGCYNEGMDR 1078
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 1343 bits (3477), Expect = 0.0
Identities = 665/994 (66%), Positives = 787/994 (79%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E ++ GCQVS++KF LW A +V +NFG G+RKL F LS+ +YKLELFYE+IWQI
Sbjct: 96 MERVTVNFGCQVSEEKFYVLWKADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQI 155
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L Q+ K LLIQ+ APRIY+K P+ + +FD P LNYF+D DDQW+R DFT
Sbjct: 156 ELRCPHSQTSKHLLIQLFGAPRIYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRS 215
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
CIGQ S L LE+P++ +LP+ RENF YYKENEG+ +LE GSS+ L LVPIV P + I
Sbjct: 216 NCIGQSSVLWLELPHNLQLPNFRENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVI 275
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LP++ILFKVN LVQNG I GP LDD F+ LV+PC + YI+HALE L L+E C+EP+
Sbjct: 276 DLPFEILFKVNLLVQNGCIPGPALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPS 335
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
RWL ++Y ++ S + TISLD GLVY+ R Q+TP+++YFCGPE+NVSNRVLR+F +
Sbjct: 336 RWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHN 395
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
DI+NF+RISFVDEE +K+ S ++ R R TGIYKRILSTLR GIVIG K+FEFL
Sbjct: 396 DIDNFLRISFVDEELEKIHSTNVQARGR------RTGIYKRILSTLRNGIVIGNKRFEFL 449
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLRENSAWMFASR GLTAADIR WMG+FS+I+NVAKYAARLGQSF SS ETL+V
Sbjct: 450 AFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVS 509
Query: 1716 KHEIEIIPDIET--ESRKYNFSDGIGKISANFARRVALKCDLNS-TPSAFQIRYGGYKGV 1546
K EI +IPDIE + KY FSDGIGKISA FA++VA KC L TPSAFQIR GG+KGV
Sbjct: 510 KDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGV 569
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VAIDP S +KLSLRKSM KY+SEN KLDVL+WSKYQPC+LNRQLITLLSTLGV D AFE+
Sbjct: 570 VAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEK 629
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+E VDQL+ +LTD + AQEALE+MSPGEN +LKEMLLCGYKPD EPFLSM L+TFRA
Sbjct: 630 KQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRA 689
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL ELRTK RIF+ KGRSMMGCLDETRTL YGQVFV F G+R
Sbjct: 690 SKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQ----------------FSGSRS 733
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
+ ++ GKV VAKNPCLHPGDVRVL+AV+V LHHMVDCV+FPQKG RPHPNECSGSDL
Sbjct: 734 ERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDL 793
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGD+YFV WDP+LIP +Q+ PM+Y PA+ LDH+V IEE+EEYFTNY+VNDSLG+I+NA
Sbjct: 794 DGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNA 853
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HT FAD+EP A S C ELAKLFSIAVDFPKTGVPAEIP L VKE PDFMEKPDKP+Y
Sbjct: 854 HTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSY 913
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
QS VIGKLFR +K++AP I+ TRE ++ YDPDMEV+GFEDYI+DA + K +YD
Sbjct: 914 QSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDY 973
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLMDYYG+KTE E+L G I+KMS+SF+K+ DAEAIS+AVRSL+KE R WFNEKGS+
Sbjct: 974 KLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKGSEL 1033
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D +I DDAYAKASAWY+VTYHP+YWG YNEGM R
Sbjct: 1034 DEEI-DDAYAKASAWYYVTYHPSYWGQYNEGMNR 1066
>gb|KHG26498.1| RNA-dependent RNA polymerase 1 -like protein [Gossypium arboreum]
gi|728850182|gb|KHG29625.1| RNA-dependent RNA polymerase
1 -like protein [Gossypium arboreum]
Length = 1110
Score = 1341 bits (3470), Expect = 0.0
Identities = 663/994 (66%), Positives = 787/994 (79%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E ++ GCQVS++KF LW A +V +NFG G+RKL F LS+ +YKLELFYE+IWQI
Sbjct: 96 MERVTVNFGCQVSEEKFYVLWKADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQI 155
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L Q+ K LLIQ+ APRIY+ + + +FD P LNYF+D DDQW+R DFT
Sbjct: 156 ELRCPHSQTSKHLLIQLFGAPRIYETEVRASECVFDDPLLNYFKDMPDDQWVRTTDFTRS 215
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
CIGQ S LCLE+P++ +LP+ RENF YYKENEG+ +LE GSS+ L LVPIV P + I
Sbjct: 216 NCIGQSSVLCLELPHNLQLPNFRENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVI 275
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LP++ILFKVN LVQNG I GP LDD F+ LV+PC + YI+HALE L L+E C+EP+
Sbjct: 276 DLPFEILFKVNLLVQNGCIPGPALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPS 335
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
RWL ++Y ++ S + TISLD GLVY+ R Q+TP+++YFCGPE+NVSNRVLR+F +
Sbjct: 336 RWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHN 395
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
DI+NF+RISFVDEE +K+ S ++ R R TGIYKRILSTLR GIVIG K+FEFL
Sbjct: 396 DIDNFLRISFVDEELEKIHSTNVQARGR------RTGIYKRILSTLRNGIVIGNKRFEFL 449
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLRENSAWMFASR GLTAADIR WMG+FS+I+NVAKYAARLGQSF SS ETL+V
Sbjct: 450 AFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVS 509
Query: 1716 KHEIEIIPDIET--ESRKYNFSDGIGKISANFARRVALKCDLNS-TPSAFQIRYGGYKGV 1546
K EI +IPDIE + KY FSDGIGKISA FA++VA KC L TPSAFQIR GG+KGV
Sbjct: 510 KDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGV 569
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VAIDP S +KLSLRKSM KY+SEN KLDVL+WSKYQPC+LNRQLITLLSTLGV D+AFE+
Sbjct: 570 VAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEK 629
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+E VDQL+ +LTD + AQEALE+MSPGEN +LKEMLLCGYKPD EPFLSM L+TFRA
Sbjct: 630 KQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRA 689
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL ELRTK RIF+ KGRSMMGCLDETRTL YGQVFV F G+R
Sbjct: 690 SKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQ----------------FSGSRS 733
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
+ ++ GKV VAKNPCLHPGDVRVL+AV+V LHHMVDCV+FPQKG RPHPNECSGSDL
Sbjct: 734 ERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDL 793
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGD+YFV WDP+LIP +Q+ PM+Y PA+ LDH+V IEE+EEYFTNY+VNDSLG+I+NA
Sbjct: 794 DGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNA 853
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HT FAD+EP A S C ELAKLFSIAVDFPKTGVPAEIP L VKE PDFMEKPDKP+Y
Sbjct: 854 HTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEFPDFMEKPDKPSY 913
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
QS VIGKLFR +K++AP I+ TRE ++ YDPDMEV+GFEDYI+DA ++K +YD
Sbjct: 914 QSYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDPDMEVEGFEDYIDDAFFYKSKYDY 973
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLMDYYG+KTE E+LSG I+KMS+SF+K+ DAE IS+AVRSL+KE R WFNEKGS+
Sbjct: 974 KLGNLMDYYGVKTEAEILSGGIMKMSRSFTKKRDAEVISMAVRSLRKEARSWFNEKGSEL 1033
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D +I DDAYAKASAWY+VTYH +YWG YNEGM R
Sbjct: 1034 DEEI-DDAYAKASAWYYVTYHHSYWGQYNEGMNR 1066
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 1338 bits (3462), Expect = 0.0
Identities = 661/994 (66%), Positives = 786/994 (79%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E ++ C VS++KF LW A +V +NFG G+RKL F LS+ +YKLELFYE+IWQI
Sbjct: 96 MERVTVNFDCHVSEEKFYVLWKADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQI 155
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L Q+ K LLIQ+ APRIY+K P+ + +FD P LNYF+D DDQW+R DFT
Sbjct: 156 ELRCPHSQTSKHLLIQLFGAPRIYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRS 215
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
CIGQ S LCLE+P++ +LP+ RENF YYKENEG+ +LE GSS+ L LVPIV P + I
Sbjct: 216 NCIGQSSVLCLELPHNLQLPNFRENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVI 275
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LP++ILFKVN LVQNG I GP LDD F+ LV+PC + YI+HALE L L+E C+EP+
Sbjct: 276 DLPFEILFKVNLLVQNGCIPGPALDDTFYRLVDPCRMHKVYIDHALEKLYYLRECCYEPS 335
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
RWL ++Y ++ S + TISLD GLVY+ R Q+TP+++YFCGPE+NVSNRVLR+F +
Sbjct: 336 RWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHN 395
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
DI+NF+RISFVDEE +K+ S ++ R R TGIYKRILSTLR GIVIG K+FEFL
Sbjct: 396 DIDNFLRISFVDEELEKIHSTNVQARGR------RTGIYKRILSTLRNGIVIGNKRFEFL 449
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLRENSAWMFASR GLTAADIR WMG+FS+I+NVAKYAARLGQSF SS ETL+V
Sbjct: 450 AFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVS 509
Query: 1716 KHEIEIIPDIET--ESRKYNFSDGIGKISANFARRVALKCDLNS-TPSAFQIRYGGYKGV 1546
K EI +IPDIE + KY F DGIGKISA FA++VA KC L TPSAFQIR GG+KGV
Sbjct: 510 KDEINLIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCRLKGCTPSAFQIRIGGFKGV 569
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VAIDP S +KLSLRKSM KY+SEN KLDVL+WSKYQPC+LNRQLITLLSTLGV D+AFE+
Sbjct: 570 VAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEK 629
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+E VDQL+ +LTD + AQEALE+MSPGEN +LKEMLLCGYKPD EPFLSM L+TFRA
Sbjct: 630 KQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLETFRA 689
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL ELRTK RIF+ KGRSMMGCLDETRTL YGQVFV F G+R
Sbjct: 690 SKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQ----------------FSGSRS 733
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
+ ++ GKV VAKNPCLHPGDVRVL+AV+V LHHMVDCV+FPQKG RPHPNECSGSDL
Sbjct: 734 ERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDL 793
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGD+YFV WDP+LIP +Q+ PM+Y PA+ LDH+V IEE+EEYFTNY+VNDSLG+I+NA
Sbjct: 794 DGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVNDSLGIISNA 853
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HT FAD+EP A S C ELAKLFSIAVDFPKTGVPAEIP L VKE PDFMEKPDKP+Y
Sbjct: 854 HTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEFPDFMEKPDKPSY 913
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
QS VIGKLFR +K++AP I+ TRE ++ YDPDMEV+GF DYI+DA ++K +YD
Sbjct: 914 QSYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDPDMEVEGFVDYIDDAFFYKSKYDY 973
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLMDYYG+KTE E+LSG I+KMS+SF+K+ DAE+IS+AVRSL+KE R WFNEKGS+
Sbjct: 974 KLGNLMDYYGVKTEAEILSGGIMKMSRSFTKKRDAESISMAVRSLRKEARSWFNEKGSEL 1033
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D +I DDAYAKASAWY+VTYH +YWG YNEGM R
Sbjct: 1034 DEEI-DDAYAKASAWYYVTYHHSYWGQYNEGMNR 1066
>ref|XP_011075687.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
gi|747058682|ref|XP_011075688.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Sesamum indicum]
gi|747058684|ref|XP_011075689.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Sesamum indicum]
Length = 1115
Score = 1332 bits (3447), Expect = 0.0
Identities = 665/994 (66%), Positives = 780/994 (78%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E L+ GCQ S +KFS LW A V V FG G++K+ F L H+ +EYKL+L YE+IWQI
Sbjct: 96 MEQVTLNFGCQTSREKFSVLWKVASVSVKFGTGMKKMHFLLCHNSVEYKLQLSYENIWQI 155
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
L Q+ K LLIQ+ APRIYKK + S +YF +TQDDQWIR DFTP
Sbjct: 156 VLYHPHGQTAKLLLIQLFGAPRIYKKVSES--------IYSYFSETQDDQWIRTTDFTP- 206
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
CIGQ S LCLE+PY +LP+ +++F+YY ++E F LE G+ F LDLVPI+ P +
Sbjct: 207 SCIGQASGLCLELPYGMRLPNFQDHFVYYSKSENPFHLERGAPFSHNLDLVPILHPPRGF 266
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LPY+ILFKV SLVQ G + GP LD FF LVNP I+ Y+EHALE L LKE C++P
Sbjct: 267 ELPYRILFKVCSLVQTGCLPGPKLDARFFQLVNPQRINTKYVEHALEKLYYLKECCYDPT 326
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
WL +QY KY + +P ISL GLVY+HR QVTPTK+YF GPEVNVSNRVLR +SD
Sbjct: 327 TWLMEQYEKYRTAKEQPTSPVISLGDGLVYVHRVQVTPTKVYFSGPEVNVSNRVLRHYSD 386
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
I+NF+R+SFVDEEWDKM S DL PR S+D T +Y+RIL TLR GI IG K FEFL
Sbjct: 387 YIDNFLRVSFVDEEWDKMYSTDLSPRVASADENGKTKLYERILKTLREGIRIGNKNFEFL 446
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLR+NS WMFA + L A IR+WMGDF I+NVAKYAARLGQSFGSS ETL+V
Sbjct: 447 AFSSSQLRDNSLWMFAPTNNLNAHYIRQWMGDFRSIRNVAKYAARLGQSFGSSTETLSVG 506
Query: 1716 KHEIEIIPDIETE--SRKYNFSDGIGKISANFARRVALKCDL-NSTPSAFQIRYGGYKGV 1546
+HEIE IPDIE KY FSDGIGKISA FARRVA++C + NSTPSAFQIRYGGYKGV
Sbjct: 507 QHEIERIPDIEAVRGGTKYIFSDGIGKISAEFARRVAVRCGVKNSTPSAFQIRYGGYKGV 566
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VA+DP S KLSLR SM KY+SEN KLDVL+WSKYQPC+LNRQ+ITLLSTLGVKDHAFER
Sbjct: 567 VAVDPTSSVKLSLRSSMLKYQSENTKLDVLAWSKYQPCFLNRQIITLLSTLGVKDHAFER 626
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+EAV QLD +L D +RAQEAL++M+PGEN +LKEML CGYKPDGEPFLSM LQTFRA
Sbjct: 627 KQREAVAQLDDILVDPLRAQEALDLMAPGENTNILKEMLKCGYKPDGEPFLSMMLQTFRA 686
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL +LR K RIF+P+GR MMGCLDET TLEYG+VFV S A R+ F ++ + MF
Sbjct: 687 SKLLDLRLKARIFVPQGRQMMGCLDETGTLEYGEVFVQFSGALRRQFNEESI-MFNDYMS 745
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
+ + ++ GKV VAKNPCLHPGDVRVL+AVDV+ALHHMVDCV+FP+KG RPHPNECSGSDL
Sbjct: 746 EYNYIVKGKVVVAKNPCLHPGDVRVLKAVDVEALHHMVDCVVFPKKGMRPHPNECSGSDL 805
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGDIYFV WDPDLIP RQV PM+Y PA LDHDV IEEVEEYFTNY+VNDSLG+I+NA
Sbjct: 806 DGDIYFVCWDPDLIPPRQVSPMDYDPAPTTGLDHDVTIEEVEEYFTNYIVNDSLGIISNA 865
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HTVFADKE MA S+SC ELA+LFSIAVDFPKTGVPAEIPSHL VKE PDFM+KPDK Y
Sbjct: 866 HTVFADKEESMALSESCLELARLFSIAVDFPKTGVPAEIPSHLRVKEYPDFMDKPDKTAY 925
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
+SKRVIGKL+R +KD+AP T +SFT+EVAR+SYDPDMEVDGF+DYI++A +K +YD
Sbjct: 926 ESKRVIGKLYREVKDIAPHTTSSKSFTKEVARRSYDPDMEVDGFKDYIDEAFDYKTEYDY 985
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLM+YYGIKTE E+LSG I+K SK+F +R DAEAI +AVRSL+ E R WF +KGS++
Sbjct: 986 KLGNLMEYYGIKTEAEILSGGIMKTSKTFDRRKDAEAIGVAVRSLRNEARSWF-KKGSES 1044
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
DD YAKASAWYHVTYHP++WG+YNEG+KR
Sbjct: 1045 -----DDPYAKASAWYHVTYHPDFWGSYNEGLKR 1073
>ref|XP_012463738.1| PREDICTED: RNA-dependent RNA polymerase 1 [Gossypium raimondii]
gi|763812161|gb|KJB79013.1| hypothetical protein
B456_013G029000 [Gossypium raimondii]
Length = 1110
Score = 1330 bits (3442), Expect = 0.0
Identities = 657/994 (66%), Positives = 785/994 (78%), Gaps = 3/994 (0%)
Frame = -2
Query: 2976 LEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQI 2797
+E ++ GCQVS +KF LW A +V +NFG G+RKL F +S+ +YKLELFYE+IWQI
Sbjct: 96 MERVTVNFGCQVSVEKFYVLWKAENVTLNFGTGMRKLEFLVSYCRSKYKLELFYENIWQI 155
Query: 2796 QLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTPL 2617
+L Q+ K LLIQ+ APRIY+K + + +FD P LNYF+D DDQW+R DFT
Sbjct: 156 ELRCPDSQTSKHLLIQLFGAPRIYEKEVRASELVFDDPLLNYFKDVPDDQWVRTTDFTRS 215
Query: 2616 CCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQRI 2437
CIGQ S LCLE+P++ +LP+ RENF YYKENE + +LE GSS+ L LVPIV P + I
Sbjct: 216 NCIGQSSVLCLELPHNLRLPNFRENFAYYKENESRLVLESGSSYSCNLSLVPIVCPLRVI 275
Query: 2436 RLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEPA 2257
LP++ILFKVN LVQNG I GP LDD F+ LV+PC +D YI+HALE L L+E C+EP+
Sbjct: 276 DLPFEILFKVNLLVQNGCIPGPALDDTFYRLVDPCRMDKVYIDHALEKLYYLRECCYEPS 335
Query: 2256 RWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFSD 2077
RWL ++Y ++ S + ISLD GLVY+ R Q+TP+++YFCGPE+NVSNRVLR+F +
Sbjct: 336 RWLFEEYKNFSRSRKYQGSPAISLDEGLVYVRRVQITPSRVYFCGPEINVSNRVLRQFHN 395
Query: 2076 DIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEFL 1897
DI+NF+RISFVDEE +K+ S+++ R R T IY+RILSTLR G++IG+K+FEFL
Sbjct: 396 DIDNFLRISFVDEELEKIHSINVQARGR------RTSIYERILSTLRNGVLIGDKRFEFL 449
Query: 1896 AFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTVM 1717
AFSSSQLRENSAWMFASR GLTAADIR WMG+FS+I+NVAKYAARLGQSF SS ETL+V
Sbjct: 450 AFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAKYAARLGQSFSSSTETLSVS 509
Query: 1716 KHEIEIIPDIET--ESRKYNFSDGIGKISANFARRVALKCDLNS-TPSAFQIRYGGYKGV 1546
K EI +IPDIE + KY FSDGIGKISA FA++VA KC L TPSAFQIR GG+KGV
Sbjct: 510 KDEINLIPDIEIMKDGIKYVFSDGIGKISAKFAKKVAAKCRLKGCTPSAFQIRIGGFKGV 569
Query: 1545 VAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFER 1366
VAIDP S +KLSLRKSM KY+SEN KLDVL+WSKYQPC+LNRQLITLLSTLGV D AFE+
Sbjct: 570 VAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEK 629
Query: 1365 KQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFRA 1186
KQ+E ++QL+ +LTD + AQEALE+MSPGEN +LKEMLLCGYKPD EPFLSM L+ FRA
Sbjct: 630 KQREVIEQLNALLTDPLEAQEALELMSPGENTNILKEMLLCGYKPDAEPFLSMMLEAFRA 689
Query: 1185 SKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTRL 1006
SKL ELRTK RIF+ KGRSMMGCLDETRTL YGQVFV F G+R
Sbjct: 690 SKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQ----------------FSGSRS 733
Query: 1005 DESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSDL 826
++ ++ GKV VAKNPCLHPGDVRVL+AV+V LHHMVDCV+FPQKG RPHPNECSGSDL
Sbjct: 734 EQRCIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPHPNECSGSDL 793
Query: 825 DGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIANA 646
DGDIYFV WDP+LIP +Q+ PM+Y PA ILDH+V IEE+EEYFTNY+VNDSLG+I+NA
Sbjct: 794 DGDIYFVCWDPELIPYKQMDPMDYSPAPTTILDHEVTIEEIEEYFTNYIVNDSLGIISNA 853
Query: 645 HTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPNY 466
HT FAD+EP A C ELAKLFSIAVDFPKTGVPAEIP L VKE PDFMEKPDKP+Y
Sbjct: 854 HTAFADREPGKAMCHPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSY 913
Query: 465 QSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYDL 286
QS VIGKLFR +K++AP I+ TRE ++ YDPDMEV+GFEDYI+DA + K +YD
Sbjct: 914 QSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDY 973
Query: 285 KLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQT 106
KLGNLMDYYG+KTE E+LSG ILKMS+SF+K+ DAEAIS+AVRSL+KE R WFNE+ S+
Sbjct: 974 KLGNLMDYYGVKTEAEILSGGILKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEERSEL 1033
Query: 105 DPDIDDDAYAKASAWYHVTYHPNYWGTYNEGMKR 4
D +I DDAYAKASAWY+VTYHP+YWG YNEGM R
Sbjct: 1034 DEEI-DDAYAKASAWYYVTYHPSYWGQYNEGMNR 1066
>ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
gi|731369199|ref|XP_010650995.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1109
Score = 1327 bits (3434), Expect = 0.0
Identities = 669/993 (67%), Positives = 781/993 (78%), Gaps = 3/993 (0%)
Frame = -2
Query: 2979 NLEHTVLHIGCQVSDDKFSTLWIAADVEVNFGFGLRKLSFFLSHHGLEYKLELFYESIWQ 2800
+++ LH G Q+S+++F LW A +V V FGFGLRK FFLSH EYKLEL E+IWQ
Sbjct: 95 SMDRITLHFGYQMSNERFCVLWKAINVSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQ 154
Query: 2799 IQLCRQRKQSKKFLLIQVQAAPRIYKKAAPSYDNIFDSPFLNYFRDTQDDQWIRAVDFTP 2620
IQL R Q+ KFLLIQ+ AP+IY+K D L+YF++T DDQW+R +DFTP
Sbjct: 155 IQLREPRGQNTKFLLIQLLDAPQIYEK---------DVSALSYFKETPDDQWVREIDFTP 205
Query: 2619 LCCIGQCSTLCLEVPYHQKLPDIRENFIYYKENEGQFILEGGSSFCRRLDLVPIVEPCQR 2440
C IGQ S LCLE+P+ +LP+ ENF YKEN+ +FILE G+SF L LVPIV P Q
Sbjct: 206 SCSIGQSSALCLELPHGSQLPNFCENFARYKENDRKFILESGASFSGNLHLVPIVGPPQG 265
Query: 2439 IRLPYKILFKVNSLVQNGIIMGPTLDDEFFNLVNPCSIDNDYIEHALEILSNLKETCFEP 2260
LP+KILFK+N+LVQNG + GPTLD FF V+P I+ +IEHALE L L+E C+EP
Sbjct: 266 SNLPFKILFKINTLVQNGCLSGPTLDTNFFRWVDPQRINISFIEHALEKLYYLEECCYEP 325
Query: 2259 ARWLRQQYNKYAMSLRRPRLSTISLDSGLVYIHRAQVTPTKIYFCGPEVNVSNRVLREFS 2080
RWL +QY Y +S + ISLD+GLVY+ R Q+TP K+YFCGPEVNVSNRVLR +
Sbjct: 326 VRWLHEQYRTY-ISKQVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYP 384
Query: 2079 DDIENFIRISFVDEEWDKMRSMDLIPRARSSDGEKHTGIYKRILSTLRTGIVIGEKKFEF 1900
+DI+NF+R+SF+DE +K+ S + PR S++G + TG+Y+RILS L+ GIVIG+KKF+F
Sbjct: 385 EDIDNFLRVSFLDENSEKIHSTVISPRM-SNEGRR-TGVYRRILSILQNGIVIGDKKFDF 442
Query: 1899 LAFSSSQLRENSAWMFASRSGLTAADIRRWMGDFSEIKNVAKYAARLGQSFGSSKETLTV 1720
LA SSSQLR+NSAWMFASR GLTAADIR MGDFS+I+NVAKYAARLGQSF SSKETL V
Sbjct: 443 LAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKV 502
Query: 1719 MKHEIEIIPDIET--ESRKYNFSDGIGKISANFARRVALKCDL-NSTPSAFQIRYGGYKG 1549
KHEIEIIPDIET + Y FSDGIGKISA A RVA+KC NSTPSAFQIRYGGYKG
Sbjct: 503 AKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKG 562
Query: 1548 VVAIDPESRFKLSLRKSMCKYKSENRKLDVLSWSKYQPCYLNRQLITLLSTLGVKDHAFE 1369
VVA+DP S KLSLRKSM KY+SEN LDVLSWSKY+PC+LNRQLITLLSTLGVKDH FE
Sbjct: 563 VVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFE 622
Query: 1368 RKQQEAVDQLDMMLTDSIRAQEALEMMSPGENNRVLKEMLLCGYKPDGEPFLSMTLQTFR 1189
+KQ+EAVDQLD +L D +RAQEALE+MSPGEN +LKEML+CGYKPD EPFLSM LQTFR
Sbjct: 623 KKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPFLSMMLQTFR 682
Query: 1188 ASKLFELRTKTRIFIPKGRSMMGCLDETRTLEYGQVFVNISSAGRKHFFDDGLDMFCGTR 1009
A+KL ELRTKTRIF+P GRSMMGCLDETRTLEYG+VFV IS G + F D L +
Sbjct: 683 AAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGDSLMFYGSGS 742
Query: 1008 LDESVVLVGKVFVAKNPCLHPGDVRVLQAVDVKALHHMVDCVLFPQKGRRPHPNECSGSD 829
++ +L GKV VAKNPCLHPGDVR+L AVDV ALHHMVDCV+FPQKG RPHP+ECSGSD
Sbjct: 743 HHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRPHPDECSGSD 802
Query: 828 LDGDIYFVSWDPDLIPSRQVPPMEYVPAAAEILDHDVRIEEVEEYFTNYMVNDSLGVIAN 649
LDGDIYFV WD DLIP RQ+ PM+Y PA ++LDHDV IEEVEEYFTNY+ ND LG+IAN
Sbjct: 803 LDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIGNDKLGIIAN 862
Query: 648 AHTVFADKEPRMAESDSCTELAKLFSIAVDFPKTGVPAEIPSHLHVKECPDFMEKPDKPN 469
AHTVFADKE A C ELAKLFSIA++FPKTGVPAEIP HLHVKE PDFMEK +KP
Sbjct: 863 AHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPAEIPFHLHVKEYPDFMEKANKPT 922
Query: 468 YQSKRVIGKLFRAIKDMAPTTGHIQSFTREVARKSYDPDMEVDGFEDYIEDAVWFKEQYD 289
Y+S+ VIGKLFR +KD+AP ++SFTR+VA +SYD DMEVDGFEDY+ DA ++K QYD
Sbjct: 923 YESQSVIGKLFREVKDVAPHNYDVRSFTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYD 982
Query: 288 LKLGNLMDYYGIKTEPEVLSGSILKMSKSFSKRNDAEAISLAVRSLKKEVRGWFNEKGSQ 109
KLG+LMD GI+TE E+LSGSI+KMSKSF KR DAEAI+LAVRSL+KE R WFN+ GS
Sbjct: 983 FKLGSLMDCCGIRTESEILSGSIMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNKMGSG 1042
Query: 108 TDPDIDDDAYAKASAWYHVTYHPNYWGTYNEGM 10
T DD YA ASAWYHVTYHP YWG YNEGM
Sbjct: 1043 TYAGA-DDVYAIASAWYHVTYHPYYWGCYNEGM 1074