BLASTX nr result

ID: Cinnamomum25_contig00012495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00012495
         (393 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHG10538.1| F-box CPR30 -like protein [Gossypium arboreum]          59   1e-06
ref|XP_012437351.1| PREDICTED: F-box protein CPR30-like isoform ...    59   2e-06
gb|KJB49020.1| hypothetical protein B456_008G098100 [Gossypium r...    59   2e-06
ref|XP_012437355.1| PREDICTED: F-box/kelch-repeat protein At3g06...    59   2e-06
ref|XP_007032645.1| S locus F-box protein with the low allelic s...    57   5e-06
ref|XP_007032644.1| S locus F-box protein with the low allelic s...    56   8e-06

>gb|KHG10538.1| F-box CPR30 -like protein [Gossypium arboreum]
          Length = 418

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
 Frame = -2

Query: 392 LIFSLDMDREEFGVVPAPK----FRTVGIRQLMAWKGFLTLVC---KSRDSSLQIWVMKK 234
           +I S  M  EEF V+P P     +     R L  W G + LV    K+ + S QI+VMK+
Sbjct: 235 VILSFHMGNEEFQVIPMPTALSLYDYAMCRSLFVWNGRIALVIYPRKAIEKSFQIYVMKE 294

Query: 233 YKVKRSWTKQFNVRWASWFHIRSNYWPFDNESFEADLKVIEHPRLRGYSLKE-------E 75
           Y V+ SWTK   +   +   +   +W  D    E    ++    L+   LK+       +
Sbjct: 295 YGVRESWTKILTIGPLTKVEMPLAFWKNDEILMEGSDGLVVSYNLKTQELKDLPIYGVPK 354

Query: 74  NFRVIAYVPSLISLK 30
           +F  + Y+ SL+S+K
Sbjct: 355 SFATLVYINSLVSVK 369


>ref|XP_012437351.1| PREDICTED: F-box protein CPR30-like isoform X1 [Gossypium
           raimondii] gi|823207457|ref|XP_012437352.1| PREDICTED:
           F-box protein CPR30-like isoform X1 [Gossypium
           raimondii] gi|823207460|ref|XP_012437353.1| PREDICTED:
           F-box protein CPR30-like isoform X1 [Gossypium
           raimondii] gi|823207463|ref|XP_012437354.1| PREDICTED:
           F-box protein CPR30-like isoform X1 [Gossypium
           raimondii] gi|763781950|gb|KJB49021.1| hypothetical
           protein B456_008G098100 [Gossypium raimondii]
          Length = 418

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
 Frame = -2

Query: 392 LIFSLDMDREEFGVVPAPKFRTVG----IRQLMAWKGFLTLVCKSR---DSSLQIWVMKK 234
           +I S  M  EEF V+P P   ++      R L  W G + LV   R   + S QI+VMK+
Sbjct: 235 VILSFHMGNEEFQVIPMPSALSLYDYSMCRSLFVWNGRIALVIYPRKGIEKSFQIYVMKE 294

Query: 233 YKVKRSWTKQFNVRWASWFHIRSNYWPFDNESFEADLKVIEHPRLRGYSLKE-------E 75
           Y V+ SWTK   +   +   +   +W  D    E    ++    L+   LK+       +
Sbjct: 295 YGVRESWTKILTIGPLTKVEMPLAFWKNDEILMEGSDGLVVSYNLKTQELKDLPIYGVPK 354

Query: 74  NFRVIAYVPSLISLK 30
           +F  + Y+ SL+S+K
Sbjct: 355 SFATLVYINSLVSVK 369


>gb|KJB49020.1| hypothetical protein B456_008G098100 [Gossypium raimondii]
          Length = 345

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
 Frame = -2

Query: 392 LIFSLDMDREEFGVVPAPKFRTVG----IRQLMAWKGFLTLVCKSR---DSSLQIWVMKK 234
           +I S  M  EEF V+P P   ++      R L  W G + LV   R   + S QI+VMK+
Sbjct: 162 VILSFHMGNEEFQVIPMPSALSLYDYSMCRSLFVWNGRIALVIYPRKGIEKSFQIYVMKE 221

Query: 233 YKVKRSWTKQFNVRWASWFHIRSNYWPFDNESFEADLKVIEHPRLRGYSLKE-------E 75
           Y V+ SWTK   +   +   +   +W  D    E    ++    L+   LK+       +
Sbjct: 222 YGVRESWTKILTIGPLTKVEMPLAFWKNDEILMEGSDGLVVSYNLKTQELKDLPIYGVPK 281

Query: 74  NFRVIAYVPSLISLK 30
           +F  + Y+ SL+S+K
Sbjct: 282 SFATLVYINSLVSVK 296


>ref|XP_012437355.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like isoform X2
           [Gossypium raimondii] gi|763781948|gb|KJB49019.1|
           hypothetical protein B456_008G098100 [Gossypium
           raimondii] gi|763781951|gb|KJB49022.1| hypothetical
           protein B456_008G098100 [Gossypium raimondii]
           gi|763781952|gb|KJB49023.1| hypothetical protein
           B456_008G098100 [Gossypium raimondii]
           gi|763781953|gb|KJB49024.1| hypothetical protein
           B456_008G098100 [Gossypium raimondii]
          Length = 384

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
 Frame = -2

Query: 392 LIFSLDMDREEFGVVPAPKFRTVG----IRQLMAWKGFLTLVCKSR---DSSLQIWVMKK 234
           +I S  M  EEF V+P P   ++      R L  W G + LV   R   + S QI+VMK+
Sbjct: 235 VILSFHMGNEEFQVIPMPSALSLYDYSMCRSLFVWNGRIALVIYPRKGIEKSFQIYVMKE 294

Query: 233 YKVKRSWTKQFNVRWASWFHIRSNYWPFDNESFEADLKVIEHPRLRGYSLKE-------E 75
           Y V+ SWTK   +   +   +   +W  D    E    ++    L+   LK+       +
Sbjct: 295 YGVRESWTKILTIGPLTKVEMPLAFWKNDEILMEGSDGLVVSYNLKTQELKDLPIYGVPK 354

Query: 74  NFRVIAYVPSLISLK 30
           +F  + Y+ SL+S+K
Sbjct: 355 SFATLVYINSLVSVK 369


>ref|XP_007032645.1| S locus F-box protein with the low allelic sequence polymorphism
           1-S2 [Theobroma cacao] gi|508711674|gb|EOY03571.1| S
           locus F-box protein with the low allelic sequence
           polymorphism 1-S2 [Theobroma cacao]
          Length = 438

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -2

Query: 392 LIFSLDMDREEFGVVPAPKFRTVG----IRQLMAWKGFLTLVC---KSRDSSLQIWVMKK 234
           +I S  M  EEF V+P P F ++      R L+ W G ++L+    +  + S +I VMK+
Sbjct: 259 VILSFHMGNEEFQVIPMPSFLSMYDYSMCRSLLIWNGCISLIIYPGRGIEKSFEICVMKE 318

Query: 233 YKVKRSWTKQFNVRWASWFHIRSNYWPFDNESFEADLKVIEHPRLRGYSLKE-------E 75
           Y V++SWTK   +   +       +W  D    E     +    LR   +K+       +
Sbjct: 319 YGVRKSWTKVLTIGPLTRVEKPLVFWKNDEILMEGTNGQVVSYNLRTQEVKDLPIYGVPK 378

Query: 74  NFRVIAYVPSLISLK 30
           +F  + YV SL+S+K
Sbjct: 379 SFATLVYVNSLVSVK 393


>ref|XP_007032644.1| S locus F-box protein with the low allelic sequence polymorphism
           1-S2, putative [Theobroma cacao]
           gi|508711673|gb|EOY03570.1| S locus F-box protein with
           the low allelic sequence polymorphism 1-S2, putative
           [Theobroma cacao]
          Length = 381

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
 Frame = -2

Query: 392 LIFSLDMDREEFGVVPAPKFRTVG----IRQLMAWKGFLTLVC---KSRDSSLQIWVMKK 234
           +I S DM  EEF  +  P F +V      R L+ W G L L+    K  + S QI VM+ 
Sbjct: 238 VILSFDMGEEEFQNISMPDFLSVYDHSICRSLLVWNGCLALIVYPGKGIEKSFQICVMEN 297

Query: 233 YKVKRSWTKQFNVRWASWFHIRSNYWPFDNE-----------SFEADLKVIEHPRLRGYS 87
           Y +K SWTK+  +   +       +W  D E           S+    K I++ R+ G  
Sbjct: 298 YGMKESWTKKLTIGPLAGVERPLMFWQNDEEIVMEGTDGQAVSYNFITKEIKNLRIYGV- 356

Query: 86  LKEENFRVIAYVPSLISLK 30
              ++F+ + YV SL+S++
Sbjct: 357 --PKSFQSLTYVNSLVSIR 373


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