BLASTX nr result
ID: Cinnamomum25_contig00012375
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00012375
(222 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III s... 98 2e-18
ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III s... 98 2e-18
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s... 97 3e-18
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 97 4e-18
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 97 5e-18
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 97 5e-18
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 96 7e-18
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 96 7e-18
ref|XP_008874445.1| hypothetical protein H310_09988 [Aphanomyces... 93 6e-17
ref|XP_009832829.1| hypothetical protein H257_08583 [Aphanomyces... 93 6e-17
ref|XP_008613145.1| hypothetical protein SDRG_09014 [Saprolegnia... 93 6e-17
gb|KHN22017.1| DNA-directed RNA polymerase III subunit RPC1 [Gly... 93 8e-17
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 93 8e-17
gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sin... 92 1e-16
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 92 1e-16
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 92 1e-16
ref|XP_003057499.1| predicted protein [Micromonas pusilla CCMP15... 92 1e-16
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 91 3e-16
gb|KGN64727.1| hypothetical protein Csa_1G084260 [Cucumis sativus] 91 4e-16
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 91 4e-16
>ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Amborella trichopoda]
Length = 1367
Score = 98.2 bits (243), Expect = 2e-18
Identities = 48/73 (65%), Positives = 61/73 (83%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+TLGVPRIKEI+ ASK+ISTPIITA L+CD+DEK+A++VKG IEKT L EVAK+V +
Sbjct: 1062 MNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKIS 1121
Query: 41 VTSREAFVRVKLD 3
VT +A + + LD
Sbjct: 1122 VTPTQASINITLD 1134
>ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Amborella trichopoda] gi|548832896|gb|ERM95665.1|
hypothetical protein AMTR_s00023p00196820 [Amborella
trichopoda]
Length = 1383
Score = 98.2 bits (243), Expect = 2e-18
Identities = 48/73 (65%), Positives = 61/73 (83%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+TLGVPRIKEI+ ASK+ISTPIITA L+CD+DEK+A++VKG IEKT L EVAK+V +
Sbjct: 1062 MNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKIS 1121
Query: 41 VTSREAFVRVKLD 3
VT +A + + LD
Sbjct: 1122 VTPTQASINITLD 1134
>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
nucifera]
Length = 1392
Score = 97.4 bits (241), Expect = 3e-18
Identities = 49/73 (67%), Positives = 60/73 (82%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPRIKEIIN +K ISTPIITA L CDD+ K+A++VKG IEKT L EVAKS+ +V
Sbjct: 1075 MNVTLGVPRIKEIINGAKNISTPIITATLECDDNVKSARIVKGCIEKTVLGEVAKSIKIV 1134
Query: 41 VTSREAFVRVKLD 3
+T R+A + + LD
Sbjct: 1135 MTQRQASIVISLD 1147
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 97.1 bits (240), Expect = 4e-18
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+TLGVPRIKEIINASK ISTPIITA L+ +DEK A++VKG IEKT L EVAKS+ V
Sbjct: 1080 MNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGEVAKSIKTV 1139
Query: 41 VTSREAFVRVKLD 3
+ + +A + VKLD
Sbjct: 1140 LRASQAIISVKLD 1152
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 96.7 bits (239), Expect = 5e-18
Identities = 48/73 (65%), Positives = 61/73 (83%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+TLGVPRIKEIINASK+ISTPIITA L+ ++D K A++VKG IEKT L +VAKS+ +V
Sbjct: 1077 MNITLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIV 1136
Query: 41 VTSREAFVRVKLD 3
+ +AFV +KLD
Sbjct: 1137 LRPGQAFVSIKLD 1149
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 96.7 bits (239), Expect = 5e-18
Identities = 48/73 (65%), Positives = 61/73 (83%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+TLGVPRIKEIINASK+ISTPIITA L+ ++D K A++VKG IEKT L +VAKS+ +V
Sbjct: 1073 MNITLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIV 1132
Query: 41 VTSREAFVRVKLD 3
+ +AFV +KLD
Sbjct: 1133 LRPGQAFVSIKLD 1145
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 96.3 bits (238), Expect = 7e-18
Identities = 49/73 (67%), Positives = 61/73 (83%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPRIKEIIN +KRISTPIITA L C+++ KTA++VKG IE+T L +VAKS+ +V
Sbjct: 1502 MNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIV 1561
Query: 41 VTSREAFVRVKLD 3
+TSR A + V LD
Sbjct: 1562 LTSRLALIAVALD 1574
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
vinifera]
Length = 1383
Score = 96.3 bits (238), Expect = 7e-18
Identities = 49/73 (67%), Positives = 61/73 (83%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPRIKEIIN +KRISTPIITA L C+++ KTA++VKG IE+T L +VAKS+ +V
Sbjct: 1066 MNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIV 1125
Query: 41 VTSREAFVRVKLD 3
+TSR A + V LD
Sbjct: 1126 LTSRLALIAVALD 1138
>ref|XP_008874445.1| hypothetical protein H310_09988 [Aphanomyces invadans]
gi|574470187|gb|ETV97199.1| hypothetical protein
H310_09988 [Aphanomyces invadans]
Length = 1498
Score = 93.2 bits (230), Expect = 6e-17
Identities = 47/73 (64%), Positives = 57/73 (78%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPR+KEIINA K ISTPIITA L+C DDE++A++VKG IEKT L EVA + V
Sbjct: 1162 MNVTLGVPRLKEIINAGKNISTPIITAALVCADDERSARIVKGRIEKTTLGEVAVHIKQV 1221
Query: 41 VTSREAFVRVKLD 3
+A++ VKLD
Sbjct: 1222 FARDQAYLSVKLD 1234
>ref|XP_009832829.1| hypothetical protein H257_08583 [Aphanomyces astaci]
gi|574112226|gb|ETV77719.1| hypothetical protein
H257_08583 [Aphanomyces astaci]
Length = 1500
Score = 93.2 bits (230), Expect = 6e-17
Identities = 47/73 (64%), Positives = 57/73 (78%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPR+KEIINA K ISTPIITA L+C DDE++A++VKG IEKT L EVA + V
Sbjct: 1164 MNVTLGVPRLKEIINAGKNISTPIITAALVCADDERSARIVKGRIEKTTLGEVAVHIKQV 1223
Query: 41 VTSREAFVRVKLD 3
+A++ VKLD
Sbjct: 1224 FARDQAYLSVKLD 1236
>ref|XP_008613145.1| hypothetical protein SDRG_09014 [Saprolegnia diclina VS20]
gi|530735263|gb|EQC33505.1| hypothetical protein
SDRG_09014 [Saprolegnia diclina VS20]
Length = 1507
Score = 93.2 bits (230), Expect = 6e-17
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPR+KEIINA K ISTPIITA L+C DDE++A++VKG IEKT L E+A + V
Sbjct: 1169 MNVTLGVPRLKEIINAGKNISTPIITAALVCSDDERSARIVKGCIEKTTLGEIAVHIKEV 1228
Query: 41 VTSREAFVRVKLD 3
+A++ VKLD
Sbjct: 1229 FARDQAYLSVKLD 1241
>gb|KHN22017.1| DNA-directed RNA polymerase III subunit RPC1 [Glycine soja]
Length = 1130
Score = 92.8 bits (229), Expect = 8e-17
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPR+KEI+N +K+ISTPIITA L DD+ TA++VKG IEKT L +VAKS+ +V
Sbjct: 811 MNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTNLGQVAKSIKVV 870
Query: 41 VTSREAFVRVKLD 3
+TSR A V + LD
Sbjct: 871 MTSRSASVVITLD 883
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 92.8 bits (229), Expect = 8e-17
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPR+KEI+N +K+ISTPIITA L DD+ TA++VKG IEKT L +VAKS+ +V
Sbjct: 1072 MNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTNLGQVAKSIKVV 1131
Query: 41 VTSREAFVRVKLD 3
+TSR A V + LD
Sbjct: 1132 MTSRSASVVITLD 1144
>gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sinensis]
gi|641854233|gb|KDO73041.1| hypothetical protein
CISIN_1g000828mg [Citrus sinensis]
Length = 1265
Score = 92.0 bits (227), Expect = 1e-16
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+T GVPRIKEIIN +KRISTPIITA L C+D+E A++VKG IEKT L +VAKS+ +V
Sbjct: 936 MNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIV 995
Query: 41 VTSREAFVRVKLD 3
+TSR A + + LD
Sbjct: 996 MTSRLASIVIALD 1008
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 92.0 bits (227), Expect = 1e-16
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+T GVPRIKEIIN +KRISTPIITA L C+D+E A++VKG IEKT L +VAKS+ +V
Sbjct: 1075 MNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIV 1134
Query: 41 VTSREAFVRVKLD 3
+TSR A + + LD
Sbjct: 1135 MTSRLASIVIALD 1147
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 92.0 bits (227), Expect = 1e-16
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+T GVPRIKEIIN +KRISTPIITA L C+D+E A++VKG IEKT L +VAKS+ +V
Sbjct: 1068 MNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIV 1127
Query: 41 VTSREAFVRVKLD 3
+TSR A + + LD
Sbjct: 1128 MTSRLASIVIALD 1140
>ref|XP_003057499.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461851|gb|EEH59144.1| predicted protein [Micromonas
pusilla CCMP1545]
Length = 1591
Score = 92.0 bits (227), Expect = 1e-16
Identities = 46/73 (63%), Positives = 55/73 (75%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+TLGVPRIKEIINASK ISTPIITA L CDDD K A++VKG +EKT L EV K +++V
Sbjct: 1219 MNITLGVPRIKEIINASKNISTPIITATLACDDDVKAARVVKGRVEKTTLGEVCKHIHVV 1278
Query: 41 VTSREAFVRVKLD 3
++ V LD
Sbjct: 1279 FDPTACYLEVALD 1291
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 90.9 bits (224), Expect = 3e-16
Identities = 47/73 (64%), Positives = 58/73 (79%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MN+T GVPRIKEIINA+KRISTP+ITA L DD+ A++VKG IEKT L +VAKS+ +V
Sbjct: 1067 MNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIV 1126
Query: 41 VTSREAFVRVKLD 3
+TSR A V + LD
Sbjct: 1127 ITSRSASVVITLD 1139
>gb|KGN64727.1| hypothetical protein Csa_1G084260 [Cucumis sativus]
Length = 1084
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/73 (60%), Positives = 57/73 (78%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPRIKEIIN +KRISTPI+TA L DD+ A++VK IEKT L ++AK + +V
Sbjct: 903 MNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIV 962
Query: 41 VTSREAFVRVKLD 3
++SR A + +KLD
Sbjct: 963 MSSRSALIEIKLD 975
>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc1 [Cucumis melo]
Length = 1400
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/73 (60%), Positives = 57/73 (78%)
Frame = -2
Query: 221 MNVTLGVPRIKEIINASKRISTPIITAFLICDDDEKTAKLVKGYIEKTELKEVAKSVNLV 42
MNVTLGVPRIKEIIN +KRISTPI+TA L DD+ A++VK IEKT L ++AK + +V
Sbjct: 1077 MNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIV 1136
Query: 41 VTSREAFVRVKLD 3
++SR A + +KLD
Sbjct: 1137 MSSRSALIEIKLD 1149