BLASTX nr result
ID: Cinnamomum25_contig00012234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00012234
(985 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chro... 320 1e-84
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 286 2e-74
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 285 3e-74
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 280 1e-72
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 277 9e-72
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 276 2e-71
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 275 3e-71
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 275 3e-71
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 275 3e-71
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 275 3e-71
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 275 4e-71
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal... 271 5e-70
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 269 2e-69
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec... 264 8e-68
ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation spec... 261 5e-67
ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation spec... 261 7e-67
ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec... 257 8e-66
ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec... 256 2e-65
ref|XP_008805116.1| PREDICTED: cleavage and polyadenylation spec... 253 1e-64
ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation spec... 253 2e-64
>ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Nelumbo
nucifera]
Length = 599
Score = 320 bits (819), Expect = 1e-84
Identities = 164/290 (56%), Positives = 198/290 (68%), Gaps = 2/290 (0%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MDPM EEQ+DY D+EYGGGQK+Q+QG GAI ALA+EE+MGEDDEYDDLYNDVNVG+GF++
Sbjct: 1 MDPMAEEQLDYGDEEYGGGQKIQYQGGGAISALAEEEMMGEDDEYDDLYNDVNVGDGFLK 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
R E VP R SRVP+ Q+V+IPGV ++ K SN+
Sbjct: 61 L--QRPEAIVPLGGIGNGGIQAQKTDGSR--SRVPEPGGSQEVSIPGVGLEGKGSNMVTG 116
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADGVSQKATVVDMARGNQVENTGFRGSVPVPPKIGP 661
FS E+K+ FS+ G EG G+Y DGVSQK ++M Q N GFRGS P+PPK+G
Sbjct: 117 FS--EQKKGGFSAGNGLEEGTGDYPDGVSQKGRPLEMGPNAQGGNLGFRGSAPIPPKVGA 174
Query: 662 DPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVAN--QPIVNDNSSRPILESGPT 835
DP Q GKF G S+LPD GT G + M N N +P+ N+N +R +E+G T
Sbjct: 175 DPSQXSGKFAGESSSLPDSGTAGPXSAPQMPSNRMNMNVNMNRPMXNENMNRXAVENGTT 234
Query: 836 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
MLFVGELHWWTTDA+LE +LSQYGRVKEIKF+DERASGKSKGYC VEFYD
Sbjct: 235 MLFVGELHWWTTDAELEXVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD 284
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X1 [Vitis vinifera]
Length = 656
Score = 286 bits (731), Expect = 2e-74
Identities = 155/296 (52%), Positives = 192/296 (64%), Gaps = 4/296 (1%)
Frame = +2
Query: 110 LQFQMDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGE 289
L+ MDPM EEQ+DYED+EYGG QK+ FQG GAI ALAD+ELMGEDDEYDDLYNDVNVGE
Sbjct: 3 LRAYMDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGE 62
Query: 290 GFMQSLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSN 469
GF+Q HR E P D P ++ + T Q + IPGV+++ K SN
Sbjct: 63 GFLQM--HRSEAPAPSGVMAGGPFQAHKT--DVPPQKL-EAGTSQGLIIPGVSIEGKYSN 117
Query: 470 VGANFSNAEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPV 643
+ EK+ + KG G ++ DG VSQK V++M QV N GF+GS P+
Sbjct: 118 -----PHFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPI 172
Query: 644 PPKIGPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTG--TVANQPIVNDNSSRPI 817
P K G +P + GK + + + GT G R M+ N G N+P+VN+N RP
Sbjct: 173 PQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPA 232
Query: 818 LESGPTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
+++G TMLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEFYD
Sbjct: 233 VDNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD 288
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185
isoform X2 [Vitis vinifera]
gi|731372811|ref|XP_010650886.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185
isoform X2 [Vitis vinifera]
Length = 650
Score = 285 bits (729), Expect = 3e-74
Identities = 154/292 (52%), Positives = 190/292 (65%), Gaps = 4/292 (1%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MDPM EEQ+DYED+EYGG QK+ FQG GAI ALAD+ELMGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
HR E P D P ++ + T Q + IPGV+++ K SN
Sbjct: 61 M--HRSEAPAPSGVMAGGPFQAHKT--DVPPQKL-EAGTSQGLIIPGVSIEGKYSN---- 111
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKI 655
+ EK+ + KG G ++ DG VSQK V++M QV N GF+GS P+P K
Sbjct: 112 -PHFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKT 170
Query: 656 GPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTG--TVANQPIVNDNSSRPILESG 829
G +P + GK + + + GT G R M+ N G N+P+VN+N RP +++G
Sbjct: 171 GAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNG 230
Query: 830 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
TMLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEFYD
Sbjct: 231 ATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD 282
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 280 bits (716), Expect = 1e-72
Identities = 150/292 (51%), Positives = 187/292 (64%), Gaps = 4/292 (1%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MD M EEQIDYE++EYGG QK+Q+QG GAIPALADEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
++ P K D P +V Q +PGV+++ K +N G +
Sbjct: 61 F----QQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTH 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKI 655
F + + + + G GNY DG VSQK +V + V N GF+GS PP+
Sbjct: 116 FPAQNDVQVAVNRPN---MGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRT 172
Query: 656 GPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTV--ANQPIVNDNSSRPILESG 829
G DP MPG+ P+ + +PG G + G L+ N G N+ +VN+N RP LE+G
Sbjct: 173 GVDPSNMPGRVANEPAPVLNPGAAGPQ-GALIPANQMGVNINVNRAMVNENQIRPPLENG 231
Query: 830 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
TMLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEF+D
Sbjct: 232 GTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFD 283
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 277 bits (708), Expect = 9e-72
Identities = 149/292 (51%), Positives = 186/292 (63%), Gaps = 4/292 (1%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MD M EEQIDYE++EYGG QK+Q+QG GAIPALADEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
++ P K D P +V Q +PGV+++ K +N G +
Sbjct: 61 F----QQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTH 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKI 655
F + + + + G GNY DG VSQK +V + V N GF+GS P +
Sbjct: 116 FPAQNDVQVAVNRPN---MGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRT 172
Query: 656 GPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTV--ANQPIVNDNSSRPILESG 829
G DP MPG+ P+ + +PG G + G L+ N G N+ +VN+N RP LE+G
Sbjct: 173 GVDPSNMPGRVANEPAPVLNPGAAGPQ-GALIPANQMGVNINVNRAMVNENQIRPPLENG 231
Query: 830 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
TMLFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEF+D
Sbjct: 232 GTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFD 283
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 276 bits (705), Expect = 2e-71
Identities = 150/289 (51%), Positives = 185/289 (64%), Gaps = 4/289 (1%)
Frame = +2
Query: 131 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 310
M EEQIDYE+DEYGG QK+Q+QG GAIPALADEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQF-- 58
Query: 311 HRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGANFSN 490
++ P K D P RV Q IPGV+++ K +N G++F
Sbjct: 59 --QQPEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSHFPA 115
Query: 491 AEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKIGPD 664
+ + + + G GNY DG VSQK +V + V N GF+GS P + G D
Sbjct: 116 QNDVQVAVNRPN---MGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVD 172
Query: 665 PGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVAN--QPIVNDNSSRPILESGPTM 838
P MPG+ P+ + +PG G + G L+ N G AN + +VN+N RP LE+G TM
Sbjct: 173 PSNMPGRVANEPAPVLNPGAAGPQ-GALIPANQMGVNANVNRVMVNENQIRPPLENGGTM 231
Query: 839 LFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
LFVGELHWWTTDA+LES+LSQYGR KEIKF+DERASGKSKGYC VEF+D
Sbjct: 232 LFVGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFD 280
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 275 bits (704), Expect = 3e-71
Identities = 145/290 (50%), Positives = 185/290 (63%), Gaps = 2/290 (0%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MD M EEQID+ D+EYGGGQK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
+ P + ++ P RV + Q + IPGV++ K NV A
Sbjct: 61 L----QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSAR 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKI 655
+ EE+ + G+Y G +SQK +V + QV+N GF+G K+
Sbjct: 116 YPEKEEQPAVNRPEMV----SGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKV 171
Query: 656 GPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 835
G DP +P K P+ + GT G + + N GT N P++N+N +P +E+GPT
Sbjct: 172 GIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPT 231
Query: 836 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
MLFVGELHWWTTDA+LES+LSQYGR+KEIKF+DE+ASGKSKGYC VEFYD
Sbjct: 232 MLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYD 281
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 275 bits (704), Expect = 3e-71
Identities = 145/290 (50%), Positives = 185/290 (63%), Gaps = 2/290 (0%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MD M EEQID+ D+EYGGGQK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
+ P + ++ P RV + Q + IPGV++ K NV A
Sbjct: 61 L----QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSAR 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKI 655
+ EE+ + G+Y G +SQK +V + QV+N GF+G K+
Sbjct: 116 YPEKEEQPAVNRPEMV----SGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKV 171
Query: 656 GPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 835
G DP +P K P+ + GT G + + N GT N P++N+N +P +E+GPT
Sbjct: 172 GIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPT 231
Query: 836 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
MLFVGELHWWTTDA+LES+LSQYGR+KEIKF+DE+ASGKSKGYC VEFYD
Sbjct: 232 MLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYD 281
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 275 bits (704), Expect = 3e-71
Identities = 145/290 (50%), Positives = 185/290 (63%), Gaps = 2/290 (0%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MD M EEQID+ D+EYGGGQK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
+ P + ++ P RV + Q + IPGV++ K NV A
Sbjct: 61 L----QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSAR 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKI 655
+ EE+ + G+Y G +SQK +V + QV+N GF+G K+
Sbjct: 116 YPEKEEQPAVNRPEMV----SGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKV 171
Query: 656 GPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 835
G DP +P K P+ + GT G + + N GT N P++N+N +P +E+GPT
Sbjct: 172 GIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPT 231
Query: 836 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
MLFVGELHWWTTDA+LES+LSQYGR+KEIKF+DE+ASGKSKGYC VEFYD
Sbjct: 232 MLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYD 281
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 275 bits (704), Expect = 3e-71
Identities = 145/290 (50%), Positives = 185/290 (63%), Gaps = 2/290 (0%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MD M EEQID+ D+EYGGGQK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
+ P + ++ P RV + Q + IPGV++ K NV A
Sbjct: 61 L----QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSAR 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKI 655
+ EE+ + G+Y G +SQK +V + QV+N GF+G K+
Sbjct: 116 YPEKEEQPAVNRPEMV----SGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKV 171
Query: 656 GPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVANQPIVNDNSSRPILESGPT 835
G DP +P K P+ + GT G + + N GT N P++N+N +P +E+GPT
Sbjct: 172 GIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPT 231
Query: 836 MLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
MLFVGELHWWTTDA+LES+LSQYGR+KEIKF+DE+ASGKSKGYC VEFYD
Sbjct: 232 MLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYD 281
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 275 bits (703), Expect = 4e-71
Identities = 149/289 (51%), Positives = 185/289 (64%), Gaps = 4/289 (1%)
Frame = +2
Query: 131 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 310
M EEQIDYE+DEYGG QK+Q+QG GAIPALADEELMGEDDEYDDLYND+NVG+G +Q
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQF-- 58
Query: 311 HRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGANFSN 490
++ P K D P RV Q IPGV+++ K +N G++F
Sbjct: 59 --QQPEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSDFPA 115
Query: 491 AEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKIGPD 664
+ + + + G GNY DG VSQK +V + V N GF+GS P + G D
Sbjct: 116 QNDVQVAVNRPN---MGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVD 172
Query: 665 PGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVAN--QPIVNDNSSRPILESGPTM 838
P MPG+ P+ + +PG G + G L+ N G AN + +VN+N RP LE+G TM
Sbjct: 173 PSNMPGRAANEPAPVLNPGAAGPQ-GALIPANQMGVNANVNRVMVNENQIRPPLENGGTM 231
Query: 839 LFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
LFVGELHWWTTDA+LES+LSQYGR KEIKF+DERASGKSKGYC VEF+D
Sbjct: 232 LFVGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFD 280
>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
protein FUS-like [Malus domestica]
Length = 658
Score = 271 bits (693), Expect = 5e-70
Identities = 151/292 (51%), Positives = 179/292 (61%), Gaps = 4/292 (1%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MDPMG+EQIDYED+EYGG QKLQ+QGSGAI ALADEE M EDDEYDDLYNDVNVGEGFMQ
Sbjct: 1 MDPMGDEQIDYEDEEYGGSQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFMQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
HR E VP P +R Q + IPGV++ K S GA
Sbjct: 61 M--HRSEAPVPPGGVGNGGLQAQKTNVPEPRARAG---VSQDLKIPGVSVQGKYSGAGAQ 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADGVSQKATVVDMARGNQVENTGFRGSVPVPPKIGP 661
F E+ + + G G SQK V++M QV GF+GS +PP +G
Sbjct: 116 FP--EQNQPPVAKEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTIPPNVGI 173
Query: 662 DPGQMPGKFVGGPSTLP--DPGTVGTRNGHLMVVNPTGTV--ANQPIVNDNSSRPILESG 829
D + GK G +P +PGT G + N AN+P+VN+N RP +E+G
Sbjct: 174 DSSDITGK--GNSEYIPSLNPGTAGPPGAAQIPTNQMSIKINANRPMVNENQIRPPIENG 231
Query: 830 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
MLFVGELHWWTTDA++ES LSQYGRVKEIKF+DERASGKSKGYC VEF+D
Sbjct: 232 SAMLFVGELHWWTTDAEIESXLSQYGRVKEIKFFDERASGKSKGYCQVEFHD 283
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 269 bits (688), Expect = 2e-69
Identities = 143/288 (49%), Positives = 180/288 (62%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MD M EEQID+ D+EYGG QK+Q+QGSGAIPALADEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
+ P + ++ P R + Q + IPGV++ K NV A
Sbjct: 61 L----QRSEAPPQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGKHLNVTAR 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADGVSQKATVVDMARGNQVENTGFRGSVPVPPKIGP 661
+ E+ S G G +SQK V++ + QV+N GF+G K+G
Sbjct: 116 YP--EQDGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGI 173
Query: 662 DPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVANQPIVNDNSSRPILESGPTML 841
DP +P K P+ + GT G + + N G N P++++N RP +E+GPTML
Sbjct: 174 DPSGVPQKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTML 233
Query: 842 FVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
FVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEFYD
Sbjct: 234 FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD 281
>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Pyrus x bretschneideri]
Length = 656
Score = 264 bits (674), Expect = 8e-68
Identities = 149/294 (50%), Positives = 183/294 (62%), Gaps = 6/294 (2%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
M+P+GEEQIDYED+EYGG KLQ+QGSGAI ALADEELM EDDE+DDLYNDVNVGEGFMQ
Sbjct: 1 MEPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEELMVEDDEFDDLYNDVNVGEGFMQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
HR E +P D P RV + Q + IPGV++ K S GA
Sbjct: 61 M--HRSEAPLPTGGVGNGGLQAQKT--DVPEPRV-QSGVSQDLKIPGVSVQGKYSGAGAQ 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADGVS--QKATVVDMARGNQVENTGFRGSVPVPPKI 655
F E+ + + G G YA G S QK V+DM QV + F+GS +PP +
Sbjct: 116 FP--EQNQPPVAKEPELGSTG--YASGASGSQKGRVMDMTHDTQVRHMAFQGSTTMPPNV 171
Query: 656 GPDPGQMPGKFVGGPSTLP--DPGTVGTRNGHLMVVNPTGTV--ANQPIVNDNSSRPILE 823
G D + GK G +P +P + G + N AN+P+VN+N RP +E
Sbjct: 172 GVDSSDITGK--GNSEFVPSLNPASAGPPGATQIPTNQMSIKINANRPMVNENQIRPPIE 229
Query: 824 SGPTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
+G LFVGELHWWTTDA++ES++SQYGRVKEIKF+DERASGKSKGYC VEF+D
Sbjct: 230 NGSATLFVGELHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHD 283
>ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
Length = 656
Score = 261 bits (667), Expect = 5e-67
Identities = 148/294 (50%), Positives = 181/294 (61%), Gaps = 6/294 (2%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MDP+GEEQIDYED+EYGG KLQ+QGSGAI ALADEE M EDDE+DDLYNDVNVGEGFMQ
Sbjct: 1 MDPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEEPMVEDDEFDDLYNDVNVGEGFMQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
HR E S+P D P RV Q + IPGV++ K S GA
Sbjct: 61 M--HRSEASLPTGGVGNGGLQAQKT--DVPEPRV-QAGVSQDLKIPGVSVQGKYSGAGAQ 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADGVS--QKATVVDMARGNQVENTGFRGSVPVPPKI 655
F + AK G +Y G S QK V++M QV + F+GS +PP +
Sbjct: 116 FPEQNQP----PVAKEPELGSTDYVSGASGSQKGRVMEMTHDPQVRHMAFQGSTTMPPNV 171
Query: 656 GPDPGQMPGKFVGGPSTLP--DPGTVGTRNGHLMVVNPTGTV--ANQPIVNDNSSRPILE 823
G D + GK G +P +P + G ++ N AN+P+VN+N RP +E
Sbjct: 172 GVDSSDITGK--GNSEFVPSLNPASAGPPGATQILTNQMSIKINANRPMVNENQIRPPIE 229
Query: 824 SGPTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
+G LFVGELHWWTTDA++ES++SQYGRVKEIKF+DERASGKSKGYC VEF+D
Sbjct: 230 NGSATLFVGELHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHD 283
>ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Prunus mume]
Length = 647
Score = 261 bits (666), Expect = 7e-67
Identities = 150/292 (51%), Positives = 179/292 (61%), Gaps = 4/292 (1%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQ 301
MDPM EEQIDYED+EYGG QKLQ+QGSGAI ALADEE M EDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 302 SLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGAN 481
HR E +P D +RV Q+ IPGV++ K S+ A
Sbjct: 61 M--HRSEAPLPPGGVGNGGLQAQKT--DVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQ 115
Query: 482 FSNAEEKRSSFSSAKGFGEGGGNYADGVS--QKATVVDMARGNQVENTGFRGSVPVPPKI 655
F E++ AK G Y G S QK ++M+ QV + GF+GS +PP I
Sbjct: 116 FP---EQQDQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNI 172
Query: 656 GPDPGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTV--ANQPIVNDNSSRPILESG 829
G D + GK + GT G M N AN+P+ N+N RP +E+G
Sbjct: 173 GGDSSDITGKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQVRPTVENG 232
Query: 830 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
TMLFVGELHWWTTD++LES+LSQYGRVKEIKF+DERASGKSKGYC VEF+D
Sbjct: 233 STMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHD 284
>ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas]
gi|802723892|ref|XP_012085552.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
[Jatropha curcas] gi|802723894|ref|XP_012085553.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 6-like [Jatropha curcas]
gi|643714049|gb|KDP26714.1| hypothetical protein
JCGZ_17872 [Jatropha curcas]
Length = 656
Score = 257 bits (657), Expect = 8e-66
Identities = 144/292 (49%), Positives = 182/292 (62%), Gaps = 7/292 (2%)
Frame = +2
Query: 131 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 310
M +EQIDYED+EYGG QK+Q+QGSGAIPALA+EE MGEDDEYDDLYNDVNVGE F+Q
Sbjct: 1 MADEQIDYEDEEYGGNQKMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQM-- 57
Query: 311 HRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGANFSN 490
H+ ++ P + + +T Q + IP VA++ K S+ G +F
Sbjct: 58 HQSQVPPPPTSVGSGGFQTQNVNESKV-----ETGGSQGLKIPEVAVEGKYSDPGTHFP- 111
Query: 491 AEEKRSSFSSAKGFGEGGGNYADG--VSQKATVVDMARGNQVENTGFRGSVPVPPKIGPD 664
E + KG G Y+DG ++QK V++M Q N GF GS VP IG D
Sbjct: 112 --EPKDVPMGVKGPEMGSVAYSDGSSIAQKGRVMEMTHDAQARNIGFHGSSSVPSNIGVD 169
Query: 665 PGQMPGKFVGGPSTLPDPGTVGTRN-----GHLMVVNPTGTVANQPIVNDNSSRPILESG 829
P M K P+ +P+ G R G+ + +N N+P VN+N RP +E+G
Sbjct: 170 PSDMSRKTANEPAPVPNTAATGPRGMPQLPGNQISINMD---VNRPTVNENQIRPPVENG 226
Query: 830 PTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
T+LFVGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKG+C VEFYD
Sbjct: 227 STVLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGFCQVEFYD 278
>ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas]
gi|802723858|ref|XP_012085541.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
[Jatropha curcas] gi|643714040|gb|KDP26705.1|
hypothetical protein JCGZ_17863 [Jatropha curcas]
Length = 651
Score = 256 bits (654), Expect = 2e-65
Identities = 144/291 (49%), Positives = 183/291 (62%), Gaps = 6/291 (2%)
Frame = +2
Query: 131 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 310
M +EQIDYED+EYGG QK+Q+QGSGAIPALA+EE MGEDDEYDDLYNDVNVGE F+Q
Sbjct: 1 MADEQIDYEDEEYGGAQKMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQM-- 57
Query: 311 HRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGANFSN 490
H+ E+ P + R G T Q + IPG ++ K SNV +F
Sbjct: 58 HQSEVPPPTTSISSGGFQAQNVNEPRVG-----TGGSQGLNIPGGVVEGKYSNVETHFP- 111
Query: 491 AEEKRSSFSSAKGFGEGGGNYADG-VSQKATVVDMARGNQVENTGFRGSVPVPPKIGPDP 667
E++ AKG G Y DG V+QK V+++ +Q N GF+GS VP + DP
Sbjct: 112 --EQKEVPMGAKGAEMGSVGYPDGSVTQKGRVMEVTHDSQARNIGFQGSSSVPSNVVVDP 169
Query: 668 GQMPGKFVGGPSTLPDPGTVGTRN-----GHLMVVNPTGTVANQPIVNDNSSRPILESGP 832
M K P+ +P+ G R G+ + +N N+P +N+N RP +E+G
Sbjct: 170 SDMSRKIPNEPAPVPNTSISGPRGIQQLPGNQISINID---VNRPGMNENQIRPPVENGS 226
Query: 833 TMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
T+LFVGELHWWTTDA+LES+LSQYG+VKEIKF+DERASGKSKG+C VEFYD
Sbjct: 227 TVLFVGELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSKGFCQVEFYD 277
>ref|XP_008805116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Phoenix dactylifera]
Length = 630
Score = 253 bits (647), Expect = 1e-64
Identities = 143/297 (48%), Positives = 179/297 (60%), Gaps = 9/297 (3%)
Frame = +2
Query: 122 MDPMGEEQIDYEDDEYGGGQKLQFQGSG-AIPALADEELMGEDDEYDDLYNDVNVGEGFM 298
MDPM EEQ+DY D+EYGG QKLQ+QGSG AIPA+A+EE+MGEDDEYDDLYNDVN+GE FM
Sbjct: 1 MDPMMEEQLDYGDEEYGGSQKLQYQGSGGAIPAIAEEEMMGEDDEYDDLYNDVNIGEDFM 60
Query: 299 QSLNHRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGA 478
Q++ R+E V D PGS P V+I G+ + K
Sbjct: 61 QTMQQRREPPVSLGNGGLLNQKT-----DGPGSATPQMGGQASVSIAGLGEEGKELKPAY 115
Query: 479 NFSNAEEKRSSFSSAKGFGEGGGNYADGVS-QKATVVDMARGNQVENTGFRGS--VPVPP 649
E+K + KG EG G++ +G S Q + + + + V N GF G+ P PP
Sbjct: 116 GPLETEQKSGGLLARKGLEEGSGDFPEGFSHQGSKAPETVQESNVGNAGFHGNSAAPSPP 175
Query: 650 KIGPDPGQMPGKFVGGPSTLP-DPGTVGTRNGHLMVVNPTGTVANQPIVNDNSSRP---- 814
K G DP K+ GGP +LP D G RN + VN T A +V +++SR
Sbjct: 176 KPGMDP-----KYSGGPLSLPSDSARSGVRNPQPVPVNQAVTTAAYHVVMNDNSRSGMGL 230
Query: 815 ILESGPTMLFVGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
+ G ML VG+LHWWTTDA LES++SQYGRVKEIKF++ERASGKSKGYC VEFYD
Sbjct: 231 VGNDGAAMLVVGDLHWWTTDAQLESVMSQYGRVKEIKFFEERASGKSKGYCQVEFYD 287
>ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium raimondii]
gi|823252908|ref|XP_012459071.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185
[Gossypium raimondii] gi|763811133|gb|KJB78035.1|
hypothetical protein B456_012G173800 [Gossypium
raimondii]
Length = 648
Score = 253 bits (645), Expect = 2e-64
Identities = 138/287 (48%), Positives = 174/287 (60%), Gaps = 2/287 (0%)
Frame = +2
Query: 131 MGEEQIDYEDDEYGGGQKLQFQGSGAIPALADEELMGEDDEYDDLYNDVNVGEGFMQSLN 310
M EEQID+ D+EYGG QK Q+QGSG IPALAD E++GEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1 MAEEQIDFGDEEYGGVQKTQYQGSGTIPALADVEMIGEDDEYDDLYNDVNVGEGFLQL-- 58
Query: 311 HRKEMSVPXXXXXXXXXXXXXKIDDRPGSRVPDTRTPQQVTIPGVAMDSKSSNVGANFSN 490
+ S P ++ P R + Q I G+++ K NV A +
Sbjct: 59 ---QRSEPPVQPGTGGTGLQAHKNEAPEPR-GEAGGSQGPNISGISVQGKYPNVSAGYRE 114
Query: 491 AEEKRSSFSSAKGFGEGGGNYADGV--SQKATVVDMARGNQVENTGFRGSVPVPPKIGPD 664
A+ + + G GNY G SQ +V++ QV+N GF+G K+G
Sbjct: 115 ADVQ----PTVNRPEIGSGNYPSGSASSQGGSVMETNFDTQVKNMGFQGLTSASSKVGTG 170
Query: 665 PGQMPGKFVGGPSTLPDPGTVGTRNGHLMVVNPTGTVANQPIVNDNSSRPILESGPTMLF 844
P +P K P+ + GT G + + N G N P++N+N RP +E+GPTMLF
Sbjct: 171 PSVVPQKIANNPAQSLNSGTGGPQGASQVPPNQMGMNVNHPMMNENQVRPPIENGPTMLF 230
Query: 845 VGELHWWTTDADLESILSQYGRVKEIKFYDERASGKSKGYCHVEFYD 985
VGELHWWTTDA+LES+LSQYGRVKEIKF+DERASGKSKGYC VEFYD
Sbjct: 231 VGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD 277