BLASTX nr result
ID: Cinnamomum25_contig00012091
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00012091
(1519 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymera... 309 e-100
ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymera... 272 5e-89
ref|XP_010649433.1| PREDICTED: probable mediator of RNA polymera... 268 1e-84
ref|XP_002279496.2| PREDICTED: probable mediator of RNA polymera... 262 1e-82
gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sin... 265 3e-81
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr... 265 4e-81
ref|XP_012075304.1| PREDICTED: probable mediator of RNA polymera... 259 7e-81
ref|XP_012075305.1| PREDICTED: probable mediator of RNA polymera... 259 7e-81
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 259 2e-80
ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymera... 258 3e-80
ref|XP_007048434.1| Transcription elongation factor (TFIIS) fami... 256 5e-80
ref|XP_012451443.1| PREDICTED: probable mediator of RNA polymera... 255 1e-79
ref|XP_011625935.1| PREDICTED: probable mediator of RNA polymera... 243 9e-79
gb|KHG16250.1| Transcription elongation factor A N-terminal and ... 252 1e-78
ref|XP_006370923.1| hypothetical protein POPTR_0019s01790g [Popu... 257 1e-77
ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymera... 252 3e-76
ref|XP_003523244.1| PREDICTED: probable mediator of RNA polymera... 250 3e-76
ref|XP_002300207.1| hypothetical protein POPTR_0001s31510g [Popu... 247 5e-76
ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymera... 251 9e-76
ref|XP_012447170.1| PREDICTED: probable mediator of RNA polymera... 244 9e-76
>ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nelumbo nucifera]
Length = 349
Score = 309 bits (792), Expect(2) = e-100
Identities = 166/281 (59%), Positives = 201/281 (71%), Gaps = 1/281 (0%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVPRCRTCDL 1013
M+ DDFRS+L+++GVDVW FIDTAISVA DY ELKDRRDGI+ RLY V C+ C+L
Sbjct: 1 MNFDDFRSILRNSGVDVWTFIDTAISVASLDYKNELKDRRDGIIERLYVPFVSGCQNCNL 60
Query: 1012 EAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLSTDSE 833
++ R N + +K + ASI KE SS +G SPSTP+S NR+ED DR+ D E
Sbjct: 61 DSTRQNCHETKKKVHQTRTEASIIKESSSIEGKRGSPSTPQS-NRDEDHDRSYGHPFDDE 119
Query: 832 QSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPSTEVRK 653
Q++ILAIKEHLE PDQSEDSLVNLLQ L+DMD+TFK LKETDIGRHVN LRKH S EVR+
Sbjct: 120 QTKILAIKEHLEDPDQSEDSLVNLLQDLADMDLTFKTLKETDIGRHVNRLRKHSSNEVRR 179
Query: 652 LVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNG-NQVLDFGYSPN 476
LVKQLVRKWK+LVDEWVK NT G+TAAST+IADGDSP+Q P+K N +QV D YSPN
Sbjct: 180 LVKQLVRKWKELVDEWVKSNTPGETAASTLIADGDSPQQNPSKGAQNSHHQVPDVAYSPN 239
Query: 475 HHHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPISCTT 353
H+ SS + K RR+ Q + +QS + T+
Sbjct: 240 PHNGSSSSDKNNSESERKEK-IIPRREPQMRPTQSVPASTS 279
Score = 87.0 bits (214), Expect(2) = e-100
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGGVQARQW 141
AR+RLHENYQEAQNAKKQRTIQ +D+HD+PKP KNSF A+NKGG QAR W
Sbjct: 301 ARRRLHENYQEAQNAKKQRTIQVMDIHDIPKP-KNSFFAKNKGGFQARHW 349
>ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Vitis vinifera]
gi|731430702|ref|XP_010665135.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26c
[Vitis vinifera] gi|296081186|emb|CBI18212.3| unnamed
protein product [Vitis vinifera]
Length = 332
Score = 272 bits (696), Expect(2) = 5e-89
Identities = 157/280 (56%), Positives = 187/280 (66%), Gaps = 5/280 (1%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVPRCRTCD- 1016
MD D+FRS+L+ +GVDVW I+TA+SVA DY EE K RRD IV RLY V RC CD
Sbjct: 1 MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNCDR 60
Query: 1015 --LEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLST 842
+ P + + KEK + L+ + IE TPES+ R+ D S
Sbjct: 61 DRIHKPNGDRSVKEK-MDQLQDESWIE--------------TPESVERDRDG------SI 99
Query: 841 DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPSTE 662
D EQS+ILAIKE LE PDQ EDSLV+LLQ+L+DMDITFKALKETDIGRHVN LRKHPS E
Sbjct: 100 DEEQSKILAIKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKHPSNE 159
Query: 661 VRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHN-GNQVLDFGY 485
VR+LVKQLVRKWKDLVDEWVKL+T G+T AS I+ADGDSP+Q KS N +QV DF Y
Sbjct: 160 VRRLVKQLVRKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNVHHQVPDFAY 219
Query: 484 SPNHHHTDESSGFSKQTPVVDGK-GAASRRDVQTKKSQSP 368
SPN H + SSG K ++ K A RR+ K +Q+P
Sbjct: 220 SPNPH--NGSSGSDKNNVELEPKRKAVPRRETPNKPNQTP 257
Score = 85.5 bits (210), Expect(2) = 5e-89
Identities = 38/50 (76%), Positives = 46/50 (92%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGGVQARQW 141
AR+RLHENYQEAQNAKKQRTIQ +D+HD+PKP KN+F A+N+GGVQA+ W
Sbjct: 284 ARRRLHENYQEAQNAKKQRTIQVMDIHDIPKP-KNTFFAKNRGGVQAKHW 332
>ref|XP_010649433.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Vitis vinifera]
gi|296088637|emb|CBI37628.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 268 bits (686), Expect(2) = 1e-84
Identities = 149/278 (53%), Positives = 191/278 (68%), Gaps = 1/278 (0%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVPRCRTCDL 1013
MD D+FR +L+++GVDVW+FI+TAISVA +DYG+EL+ RRDGIV R+Y ++ RC +C+L
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMSS--RCGSCNL 58
Query: 1012 EAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLSTDSE 833
S L+ EKE D SP TP+SINR +DR L D E
Sbjct: 59 RYQHSG----------LDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDRYGGL-LDEE 107
Query: 832 QSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPSTEVRK 653
++RIL IKEHLE PDQ +DS+V+LLQTL+DMDITFKALKETDIGRHVN LRKHPS +VR+
Sbjct: 108 EARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRR 167
Query: 652 LVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLDFGYSPNH 473
LVK LVRKWKDLVDEWVK N +G+ +S ++A+GDSP Q ++ H +QV DFGYSPN
Sbjct: 168 LVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRTGH--HQVPDFGYSPNP 225
Query: 472 HHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQS-PIS 362
+ S + P K A R++V T+ +QS P+S
Sbjct: 226 QNGSSGSDKNNAEPEPKVK-AIPRKEVPTRPAQSAPVS 262
Score = 74.3 bits (181), Expect(2) = 1e-84
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGGVQAR 147
ARKRLHENYQEAQNAKKQRTIQ +D+HD+PKP KN+F A+ K G Q R
Sbjct: 284 ARKRLHENYQEAQNAKKQRTIQVMDIHDIPKP-KNTFFAKPKVGSQGR 330
>ref|XP_002279496.2| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Vitis vinifera]
Length = 331
Score = 262 bits (670), Expect(2) = 1e-82
Identities = 148/278 (53%), Positives = 190/278 (68%), Gaps = 1/278 (0%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVPRCRTCDL 1013
MD D+FR +L+++GVDVW+FI+TAISVA +DYG+EL+ RRDGIV R+Y ++ RC +C+L
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMSS--RCGSCNL 58
Query: 1012 EAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLSTDSE 833
S L+ EKE D SP TP+SINR +DR L D E
Sbjct: 59 RYQHSG----------LDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDRYGGL-LDEE 107
Query: 832 QSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPSTEVRK 653
++RIL IKEHLE PDQ +DS+V+LLQTL+DMDITFKALKETDIGRHVN LRKHPS +VR+
Sbjct: 108 EARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRR 167
Query: 652 LVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLDFGYSPNH 473
LVK LVRKWKDLVDEWVK N +G+ +S ++ +GDSP Q ++ H +QV DFGYSPN
Sbjct: 168 LVKHLVRKWKDLVDEWVKSNPAGEFTSSALM-EGDSPPQKIPRTGH--HQVPDFGYSPNP 224
Query: 472 HHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQS-PIS 362
+ S + P K A R++V T+ +QS P+S
Sbjct: 225 QNGSSGSDKNNAEPEPKVK-AIPRKEVPTRPAQSAPVS 261
Score = 74.3 bits (181), Expect(2) = 1e-82
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGGVQAR 147
ARKRLHENYQEAQNAKKQRTIQ +D+HD+PKP KN+F A+ K G Q R
Sbjct: 283 ARKRLHENYQEAQNAKKQRTIQVMDIHDIPKP-KNTFFAKPKVGSQGR 329
>gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
Length = 353
Score = 265 bits (677), Expect(2) = 3e-81
Identities = 164/301 (54%), Positives = 189/301 (62%), Gaps = 24/301 (7%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVP-RCRTCD 1016
MDLDDFRS+LK GVDVW FIDTAI VA DY ELK+RRD IV RLYAT + RCR CD
Sbjct: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
Query: 1015 LEAPRSNGTDKEKNIKSLEANASIEKEMS--SHDGIGA----SPSTPESINREEDQDRTN 854
NG + KE+S HD + A SPSTP S+N ++D D N
Sbjct: 61 F----GNGV------------VDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIEN 104
Query: 853 DLST--------DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGR 698
D D EQ RIL IKEHLE PDQSED+L++LLQ+L+DMDITFKALKETDIGR
Sbjct: 105 DNDIIDPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGR 164
Query: 697 HVNSLRKHPSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSI 518
HVN LRKH S +VRKLVK LVRKWKD+VDEWVKLN G+ A+S ++ DGDSP+Q K
Sbjct: 165 HVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQ---KIP 220
Query: 517 HNGN-QVLDFGYSPNHH--------HTDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPI 365
NGN QV DF YSPN H + E SKQ P + K A S R Q+ +P
Sbjct: 221 QNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAP-LPRKEALSSRPPQSASPAAPH 279
Query: 364 S 362
S
Sbjct: 280 S 280
Score = 66.6 bits (161), Expect(2) = 3e-81
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGG-VQARQW 141
ARKRL ENY+ +NAK+QRTIQ +D+H++PKP KN+F +NKGG Q R W
Sbjct: 304 ARKRLQENYKREENAKRQRTIQVMDIHEIPKP-KNAFFGKNKGGSSQGRHW 353
>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|568820070|ref|XP_006464554.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
hypothetical protein CICLE_v10025964mg [Citrus
clementina]
Length = 353
Score = 265 bits (676), Expect(2) = 4e-81
Identities = 164/301 (54%), Positives = 189/301 (62%), Gaps = 24/301 (7%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVP-RCRTCD 1016
MDL+DFRS+LK GVDVW FIDTAI VA DY ELK+RRD IV RLYAT + RCR CD
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
Query: 1015 LEAPRSNGTDKEKNIKSLEANASIEKEMS--SHDGIGA----SPSTPESINREEDQDRTN 854
NG + KE+S HD + A SPSTP S+N ++D D N
Sbjct: 61 F----GNGV------------VDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIEN 104
Query: 853 DLST--------DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGR 698
D D EQ RIL IKEHLE PDQSEDSL++LLQ+L+DMDITFKALKETDIGR
Sbjct: 105 DNDIIDPYGGLFDDEQKRILEIKEHLEDPDQSEDSLIDLLQSLADMDITFKALKETDIGR 164
Query: 697 HVNSLRKHPSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSI 518
HVN LRKH S +VRKLVK LVRKWKD+VDEWVKLN G+ A+S ++ DGDSP+Q K
Sbjct: 165 HVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQ---KIP 220
Query: 517 HNGN-QVLDFGYSPNHH--------HTDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPI 365
NGN QV DF YSPN H + E SKQ P + K A S R Q+ +P
Sbjct: 221 QNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAP-LPRKEALSSRPPQSASPAAPH 279
Query: 364 S 362
S
Sbjct: 280 S 280
Score = 66.6 bits (161), Expect(2) = 4e-81
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGG-VQARQW 141
ARKRL ENY+ +NAK+QRTIQ +D+H++PKP KN+F +NKGG Q R W
Sbjct: 304 ARKRLQENYKREENAKRQRTIQVMDIHEIPKP-KNAFFGKNKGGSSQGRHW 353
>ref|XP_012075304.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Jatropha curcas]
gi|643726633|gb|KDP35313.1| hypothetical protein
JCGZ_09472 [Jatropha curcas]
Length = 349
Score = 259 bits (662), Expect(2) = 7e-81
Identities = 141/285 (49%), Positives = 191/285 (67%), Gaps = 11/285 (3%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVPRCRTCDL 1013
MD+DDFRS+L+ +GVDVW FI+TAI VA +D+G ELK RRD IV LY+++ RCR CD
Sbjct: 1 MDIDDFRSILESSGVDVWTFIETAIMVASSDFGSELKRRRDKIVEMLYSSSDGRCRNCDF 60
Query: 1012 EAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLSTD-- 839
+ R N + K +S E ++ G G+ +TP SI+ EE+++ D D
Sbjct: 61 DVGRINDGHEMKE-------SSHEAKVGGGGGSGSPSTTPRSIHGEEEEEEEEDDELDPY 113
Query: 838 -----SEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKH 674
EQ +IL IK+ +E PDQSEDSL++LLQ+L+DMDITF+ALKETDIGRHVN LRKH
Sbjct: 114 GGLLDDEQKKILEIKQSIEDPDQSEDSLIDLLQSLADMDITFRALKETDIGRHVNRLRKH 173
Query: 673 PSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLD 494
S +VRKLVKQLVRKWK++VDEWV+LN G+ A+S ++ADGDSP+Q ++ H +QV D
Sbjct: 174 SSNDVRKLVKQLVRKWKEIVDEWVRLNPQGEHASSALMADGDSPQQKIPQNGH--HQVPD 231
Query: 493 FGYSPNHHH----TDESSGFSKQTPVVDGKGAASRRDVQTKKSQS 371
F YSPN H+ +D+++ ++ P + A R +Q S S
Sbjct: 232 FAYSPNPHNGSSGSDKNNSEPERKPKPVPRKEAPPRPIQQSASAS 276
Score = 71.2 bits (173), Expect(2) = 7e-81
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGGV-QARQW 141
ARKRL ENY+EA NAKKQRTIQ +D+H++PKP KN+F ++NKGG Q R W
Sbjct: 300 ARKRLQENYKEALNAKKQRTIQVMDIHEIPKP-KNTFFSKNKGGASQGRHW 349
>ref|XP_012075305.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Jatropha curcas]
Length = 347
Score = 259 bits (662), Expect(2) = 7e-81
Identities = 141/285 (49%), Positives = 191/285 (67%), Gaps = 11/285 (3%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVPRCRTCDL 1013
MD+DDFRS+L+ +GVDVW FI+TAI VA +D+G ELK RRD IV LY+++ RCR CD
Sbjct: 1 MDIDDFRSILESSGVDVWTFIETAIMVASSDFGSELKRRRDKIVEMLYSSSDGRCRNCDF 60
Query: 1012 EAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLSTD-- 839
+ R N + K +S E ++ G G+ +TP SI+ EE+++ D D
Sbjct: 61 DVGRINDGHEMKE-------SSHEAKVGGGGGSGSPSTTPRSIHGEEEEEEEEDDELDPY 113
Query: 838 -----SEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKH 674
EQ +IL IK+ +E PDQSEDSL++LLQ+L+DMDITF+ALKETDIGRHVN LRKH
Sbjct: 114 GGLLDDEQKKILEIKQSIEDPDQSEDSLIDLLQSLADMDITFRALKETDIGRHVNRLRKH 173
Query: 673 PSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLD 494
S +VRKLVKQLVRKWK++VDEWV+LN G+ A+S ++ADGDSP+Q ++ H +QV D
Sbjct: 174 SSNDVRKLVKQLVRKWKEIVDEWVRLNPQGEHASSALMADGDSPQQKIPQNGH--HQVPD 231
Query: 493 FGYSPNHHH----TDESSGFSKQTPVVDGKGAASRRDVQTKKSQS 371
F YSPN H+ +D+++ ++ P + A R +Q S S
Sbjct: 232 FAYSPNPHNGSSGSDKNNSEPERKPKPVPRKEAPPRPIQQSASAS 276
Score = 71.2 bits (173), Expect(2) = 7e-81
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGGV-QARQW 141
ARKRL ENY+EA NAKKQRTIQ +D+H++PKP KN+F ++NKGG Q R W
Sbjct: 298 ARKRLQENYKEALNAKKQRTIQVMDIHEIPKP-KNTFFSKNKGGASQGRHW 347
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Cucumis sativus] gi|700193190|gb|KGN48394.1|
hypothetical protein Csa_6G486670 [Cucumis sativus]
Length = 345
Score = 259 bits (662), Expect(2) = 2e-80
Identities = 149/289 (51%), Positives = 185/289 (64%), Gaps = 8/289 (2%)
Frame = -1
Query: 1195 RMDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVP--RCRT 1022
R+DLDDFR++L GVDVW FIDTA+ VA DYG +LK+RRDGIV RLYA T P RCR
Sbjct: 3 RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62
Query: 1021 CDLEAP---RSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTND 851
CD + RSNG + ++ + KE ASPSTP+ + E D D +
Sbjct: 63 CDTDRNHDGRSNGCE-------IKQGSGEVKE--------ASPSTPQFVVVEGDDDGADP 107
Query: 850 LST--DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRK 677
+ D EQ ++L IKE LE+P Q ED+LV LLQ L+DMDITF+ALKETDIGRHVN LRK
Sbjct: 108 YAGLFDDEQKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRK 167
Query: 676 HPSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNG-NQV 500
HPS +VR+LVK LVRKWK++VDEWV+LN G+ A T++ADGDSP+Q K+ NG +QV
Sbjct: 168 HPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTA-TLLADGDSPQQ---KAPQNGYHQV 223
Query: 499 LDFGYSPNHHHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPISCTT 353
DF YSPN H+ S + P GK R + Q+P S T
Sbjct: 224 PDFAYSPNPHNGGSGSDRNNSEPEPKGKSVPRRDALPKPTQQAPTSSLT 272
Score = 70.1 bits (170), Expect(2) = 2e-80
Identities = 33/53 (62%), Positives = 43/53 (81%), Gaps = 3/53 (5%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNK---GGVQARQW 141
ARKRL ENY+EA+NAK+QRTIQ +D+H++PKP KN+F ++NK GG Q R W
Sbjct: 294 ARKRLQENYKEAENAKRQRTIQVMDIHEIPKP-KNAFFSKNKGSGGGSQGRHW 345
>ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Cucumis melo]
Length = 345
Score = 258 bits (660), Expect(2) = 3e-80
Identities = 152/290 (52%), Positives = 187/290 (64%), Gaps = 9/290 (3%)
Frame = -1
Query: 1195 RMDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTVP--RCRT 1022
R+DLDDFR++L GVDVW FIDTA+ VA DYG +LK+RRDGIV RLYA T P RCR
Sbjct: 3 RLDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRN 62
Query: 1021 CDLEAP---RSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTND 851
CD + RSNG E + S + GASPSTP+ + E D D +
Sbjct: 63 CDTDRNHDGRSNGC---------------EIKQGSGEVKGASPSTPQFVVVEGDDDGADP 107
Query: 850 LST--DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRK 677
+ D EQ ++L IKE LE+P Q ED+LV LLQ L+DMDITF+ALKETDIGRHVN LRK
Sbjct: 108 YAGLFDDEQKKVLEIKEQLEIPHQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRK 167
Query: 676 HPSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNG-NQV 500
H S +VR+LVK LVRKWK++VDEWV+LN G+ A T++ADGDSP+Q K+ NG +QV
Sbjct: 168 HSSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTA-TLLADGDSPQQ---KAPQNGYHQV 223
Query: 499 LDFGYSPNHHHTDESSGFSKQTPVVDGKGAASRRDVQTKKS-QSPISCTT 353
DF YSPN H+ S + P GK + RRD K + Q+P S T
Sbjct: 224 PDFAYSPNPHNGGSGSDRNNSEPEPKGK-SVPRRDAPPKPTQQAPTSSLT 272
Score = 70.1 bits (170), Expect(2) = 3e-80
Identities = 33/53 (62%), Positives = 43/53 (81%), Gaps = 3/53 (5%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNK---GGVQARQW 141
ARKRL ENY+EA+NAK+QRTIQ +D+H++PKP KN+F ++NK GG Q R W
Sbjct: 294 ARKRLQENYKEAENAKRQRTIQVMDIHEIPKP-KNAFFSKNKGSGGGSQGRHW 345
>ref|XP_007048434.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
gi|590709002|ref|XP_007048435.1| Transcription elongation
factor (TFIIS) family protein, putative isoform 1
[Theobroma cacao] gi|508700695|gb|EOX92591.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
gi|508700696|gb|EOX92592.1| Transcription elongation
factor (TFIIS) family protein, putative isoform 1
[Theobroma cacao]
Length = 336
Score = 256 bits (655), Expect(2) = 5e-80
Identities = 145/276 (52%), Positives = 182/276 (65%), Gaps = 2/276 (0%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATT-VPRCRTCD 1016
MDLDDFRSVL+ VDVW FIDTAI VA DYG ELK RRD IV RLYAT+ V +CR CD
Sbjct: 1 MDLDDFRSVLETAEVDVWTFIDTAILVASLDYGPELKQRRDRIVERLYATSMVTQCRNCD 60
Query: 1015 LEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGI-GASPSTPESINREEDQDRTNDLSTD 839
S+ E A +++E S D G SP+ P+S N +++ D L D
Sbjct: 61 FGERPSD----------YEVKADLKRESSHEDKRRGGSPNAPQSDNGDDELDPYGGLF-D 109
Query: 838 SEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPSTEV 659
EQ +IL IKEHLE P QSEDSL++LLQ+L+DMDITF+ALKETDIGRHVN LRKH S +V
Sbjct: 110 DEQKKILEIKEHLEEPHQSEDSLIDLLQSLADMDITFQALKETDIGRHVNILRKHSSNDV 169
Query: 658 RKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLDFGYSP 479
R+LVKQLVRKWK++VDEWV+LN G+ +S ++ADGDSP++ P ++ + +QV DF YSP
Sbjct: 170 RRLVKQLVRKWKEIVDEWVRLNQPGELESSALMADGDSPQRKPPQNGY--HQVPDFAYSP 227
Query: 478 NHHHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQS 371
N H+ S + P K R + K + S
Sbjct: 228 NPHNGSSGSDKNNSEPERKPKPIPPRNEPPPKPTYS 263
Score = 71.2 bits (173), Expect(2) = 5e-80
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGG-VQARQW 141
ARKRL ENY+EA+NAK+QRTIQ +D+H+LPKP KN+F +NKGG Q R W
Sbjct: 287 ARKRLQENYKEAENAKRQRTIQVMDIHELPKP-KNAFFGKNKGGSSQGRHW 336
>ref|XP_012451443.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Gossypium raimondii]
gi|763800943|gb|KJB67898.1| hypothetical protein
B456_010G216800 [Gossypium raimondii]
Length = 335
Score = 255 bits (652), Expect(2) = 1e-79
Identities = 142/267 (53%), Positives = 176/267 (65%), Gaps = 1/267 (0%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATT-VPRCRTCD 1016
MDLDDFRSVL+ GVDVW FIDTAI VA DYG+ELK RRDGIV RLYAT+ V +C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60
Query: 1015 LEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLSTDS 836
SNG + N +G+ SP +P+S N +D D L D
Sbjct: 61 F-GEGSNG---------YQLNNESNPHEGGEEGVTGSPFSPQSDNENDDFDPYGGLF-DD 109
Query: 835 EQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPSTEVR 656
EQ R+L IKE LE+PDQSED+LV+LLQ+L+DMDITF+ALKETDIGRHVN LRKH S +VR
Sbjct: 110 EQKRVLEIKERLELPDQSEDTLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVR 169
Query: 655 KLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLDFGYSPN 476
+LVK LVRKWKD+VDEWV++N G+ + ++ DGDSP+Q P + + QV DF YSPN
Sbjct: 170 RLVKHLVRKWKDIVDEWVRVNQPGEHEPAALM-DGDSPQQKPPQ--NGRQQVPDFAYSPN 226
Query: 475 HHHTDESSGFSKQTPVVDGKGAASRRD 395
H+ S + P K R+D
Sbjct: 227 PHNGGSGSEKNNSEPERKPKPIPPRKD 253
Score = 71.2 bits (173), Expect(2) = 1e-79
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNK-GGVQARQW 141
ARKRL E+Y+EA+NAKKQRT+Q +D+H+LPKP KN+F RNK GG Q R W
Sbjct: 286 ARKRLQESYKEAENAKKQRTVQVMDIHELPKP-KNAFFGRNKGGGSQGRHW 335
>ref|XP_011625935.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Amborella trichopoda]
Length = 358
Score = 243 bits (621), Expect(2) = 9e-79
Identities = 146/304 (48%), Positives = 197/304 (64%), Gaps = 27/304 (8%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYAT-TVPRCRTCD 1016
MDLD+FRS+LK++G+DVW I++AIS+A DY +E K RRDGI +LY + +V C CD
Sbjct: 1 MDLDEFRSLLKNSGLDVWTAIESAISLAQMDYRDEFKVRRDGIAEKLYTSNSVVGCHNCD 60
Query: 1015 LEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESI---------NREEDQD 863
L+ R + T KEK E+ SSHD GASPSTP+S+ N E++
Sbjct: 61 LDLARLS-TTKEK---------CREERESSHDK-GASPSTPQSLVHSHRDEEQNGREEEH 109
Query: 862 RTNDLSTDSE---------------QSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITF 728
R + + E Q ++LAIKE LE PDQSEDS+++LLQ+L+DMD+T
Sbjct: 110 REPVMKREEEGNRRDEEHGSHGGLIQDKLLAIKEDLEDPDQSEDSVIDLLQSLTDMDVTV 169
Query: 727 KALKETDIGRHVNSLRKHPSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGD 548
KALKETDIGRHVN LRKHPSTEVR+LVK L+RKWK+LVDEWV +T+G+ AA+ I+A+G+
Sbjct: 170 KALKETDIGRHVNGLRKHPSTEVRRLVKHLIRKWKELVDEWV--STAGEGAAAAIVAEGE 227
Query: 547 SPRQ-MPAKSIHNGNQVLDFGYSPNHHHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQ- 374
SP+Q A++ NGNQV + +SPN + + G + GKG +R+ QTK +
Sbjct: 228 SPQQNHQARASQNGNQVRESKHSPNGYSSGSGMGPNYSEIGSKGKGITPQREAQTKPNPI 287
Query: 373 SPIS 362
+PIS
Sbjct: 288 APIS 291
Score = 80.1 bits (196), Expect(2) = 9e-79
Identities = 35/50 (70%), Positives = 44/50 (88%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKGGVQARQW 141
ARKRLHENYQEA+NAK+QRTIQ +D+HD+PKP KN+F++RNKGG + W
Sbjct: 310 ARKRLHENYQEAENAKRQRTIQVMDIHDIPKP-KNTFISRNKGGFHKQHW 358
>gb|KHG16250.1| Transcription elongation factor A N-terminal and central
domain-containing 2 [Gossypium arboreum]
Length = 335
Score = 252 bits (643), Expect(2) = 1e-78
Identities = 141/267 (52%), Positives = 175/267 (65%), Gaps = 1/267 (0%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATT-VPRCRTCD 1016
MDLDDFRSVL+ GVDVW FIDTAI VA DYG+ELK RRDGIV RLYAT+ V +C++CD
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDTAILVASLDYGQELKQRRDGIVERLYATSMVTKCKSCD 60
Query: 1015 LEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLSTDS 836
SNG + N +G+ SP +P+S N +D D L D
Sbjct: 61 F-GEGSNG---------YQLNNESNPHEGGEEGVKGSPFSPQSDNENDDFDPYGGLF-DD 109
Query: 835 EQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPSTEVR 656
EQ R+L IKE LE+PDQSED+LV+LLQ+L+DMDITF+ALKETDIGRHVN LRKH S +VR
Sbjct: 110 EQKRVLEIKERLELPDQSEDTLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVR 169
Query: 655 KLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLDFGYSPN 476
+LVK LVRKWKD+VDEWV++N G+ + ++ DGDS +Q P + + QV DF YSPN
Sbjct: 170 RLVKHLVRKWKDIVDEWVRVNQPGEHEPAALM-DGDSAQQKPPQ--NGRQQVPDFAYSPN 226
Query: 475 HHHTDESSGFSKQTPVVDGKGAASRRD 395
H+ S + P K R+D
Sbjct: 227 PHNGGSGSEKNNSEPDRKPKPIPPRKD 253
Score = 71.2 bits (173), Expect(2) = 1e-78
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNK-GGVQARQW 141
ARKRL E+Y+EA+NAKKQRT+Q +D+H+LPKP KN+F RNK GG Q R W
Sbjct: 286 ARKRLQESYKEAENAKKQRTVQVMDIHELPKP-KNAFFGRNKGGGSQGRHW 335
>ref|XP_006370923.1| hypothetical protein POPTR_0019s01790g [Populus trichocarpa]
gi|550316504|gb|ERP48720.1| hypothetical protein
POPTR_0019s01790g [Populus trichocarpa]
Length = 357
Score = 257 bits (657), Expect(2) = 1e-77
Identities = 142/284 (50%), Positives = 180/284 (63%), Gaps = 4/284 (1%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATT--VPRCRTC 1019
MD+DDFR +L+ +GVDVW FIDTAI VA D+G ELK RRD IV RL+A++ RCR
Sbjct: 1 MDIDDFRLILESSGVDVWTFIDTAIVVASLDFGSELKRRRDDIVERLFASSSSCSRCRDR 60
Query: 1018 DLEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLST- 842
L N T IK L S +E SP TP S+N + D D +
Sbjct: 61 SLNDINMNNTSNGDEIKGLVEKESSHEEEKGTRVAADSPVTPRSVNGDGDDDELDPYGGL 120
Query: 841 -DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPST 665
D E +IL IK+ LE DQ EDSLV+LLQ+L+DMDITF+ALKETDIGRHVN LRKHPS
Sbjct: 121 FDDEPKKILVIKQQLEDIDQPEDSLVDLLQSLADMDITFQALKETDIGRHVNRLRKHPSN 180
Query: 664 EVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLDFGY 485
+VR+LVKQLVRKWK++VD+WV+LN G+ A+S ++ADGDSP+Q ++ H +QV DF Y
Sbjct: 181 DVRRLVKQLVRKWKEIVDDWVRLNPQGEHASSGLMADGDSPQQKIPQNGH--HQVPDFAY 238
Query: 484 SPNHHHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPISCTT 353
SPN H+ S + P K A R TK +Q P+ ++
Sbjct: 239 SPNPHNGSSGSDRNNSEPERKPKPAPPRNQAPTKPTQKPVPASS 282
Score = 62.4 bits (150), Expect(2) = 1e-77
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 4/54 (7%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKP-SKNSFLARNK---GGVQARQW 141
A KRL NY+EA+NAKKQRTIQ +D+H++PKP +KN+F +N+ G Q R W
Sbjct: 304 ASKRLQANYKEAENAKKQRTIQVMDIHEIPKPKNKNTFFPKNRGAGGSHQGRHW 357
>ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X3 [Glycine max]
Length = 359
Score = 252 bits (644), Expect(2) = 3e-76
Identities = 148/291 (50%), Positives = 184/291 (63%), Gaps = 12/291 (4%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTV--PRCRTC 1019
MDLDDFRSVL GVDVW FID AI+VA AD ELK RRDGIV RLYA T P+CR C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 1018 DLEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLST- 842
D NG +K S + ++ ASP+TP+S+ E D D DL
Sbjct: 61 DDGGNDLNGHQIKKQ-SSPSPERQPHQRRAAAIAAAASPATPQSL--ENDNDGEEDLDPY 117
Query: 841 ----DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKH 674
D EQ +IL IKE LE PDQSEDSLV LLQ+L+DMDITF+ALKETDIGRHVN LRKH
Sbjct: 118 GGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRKH 177
Query: 673 PSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPR-QMPAKSIHNGNQVL 497
PS +VR+LVK LVRKWK++VDEWVKLN G+ ++T++ADGDSP Q ++ H+ Q+
Sbjct: 178 PSNDVRRLVKLLVRKWKEIVDEWVKLNPQGR--SNTLMADGDSPPVQKTTQNGHHHQQIP 235
Query: 496 DFGYSPNHHH----TDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPISCT 356
DF YSPN H+ +D ++ ++ P V + + + +P S T
Sbjct: 236 DFAYSPNPHNGSSGSDRNNSEAEHKPKVVPRSEPRPKPAPSPSVSTPASAT 286
Score = 62.8 bits (151), Expect(2) = 3e-76
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLP--KPSKNSFLARNK-----GGVQARQW 141
AR+RL ENY+EA+ AK+QRTIQ +D+H+LP KP N+F +NK GG Q R W
Sbjct: 303 ARRRLQENYKEAEIAKRQRTIQVMDIHELPKSKPKNNAFFGKNKGGGGGGGSQGRHW 359
>ref|XP_003523244.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X1 [Glycine max]
Length = 356
Score = 250 bits (639), Expect(2) = 3e-76
Identities = 144/291 (49%), Positives = 184/291 (63%), Gaps = 12/291 (4%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTV--PRCRTC 1019
MDLDDFRS+L GVDVW FID AI+VA +D +LK RRDGIV RLYA T P CR C
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 1018 DLEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLST- 842
D R NG IK ++ + ASP+TP+S++ ED+D DL
Sbjct: 61 DEGGHRLNG----HRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLDPY 116
Query: 841 ----DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKH 674
D EQ +IL IKE LE PDQSEDSLV LLQ+L+DMDITF+ LKETDIGRHVN LRKH
Sbjct: 117 GGLLDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKH 176
Query: 673 PSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGD-SPRQMPAKSIHNGNQVL 497
PS ++R+LVK LVRKWK++VDEWVKLN G ++T++ADGD SP Q ++ H+ Q+
Sbjct: 177 PSNDLRRLVKLLVRKWKEIVDEWVKLNPRG--GSNTLMADGDSSPVQKTTQNGHH-QQIP 233
Query: 496 DFGYSPNHHH----TDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPISCT 356
DF YSPN H+ +D ++ +++ P V + + + +P S T
Sbjct: 234 DFAYSPNPHNGSSGSDRNNSEAERKPKVVPRSEPRPKHAPSPSVSTPASAT 284
Score = 64.7 bits (156), Expect(2) = 3e-76
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 6/56 (10%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLP--KPSKNSFLARNK----GGVQARQW 141
AR+RL ENY+EA+ AK+QRTIQ +D+HDLP KP N+F +NK GG Q R W
Sbjct: 301 ARRRLQENYKEAEIAKRQRTIQVMDIHDLPKAKPKNNAFFGKNKGGGGGGSQGRHW 356
>ref|XP_002300207.1| hypothetical protein POPTR_0001s31510g [Populus trichocarpa]
gi|222847465|gb|EEE85012.1| hypothetical protein
POPTR_0001s31510g [Populus trichocarpa]
Length = 361
Score = 247 bits (631), Expect(2) = 5e-76
Identities = 139/285 (48%), Positives = 181/285 (63%), Gaps = 5/285 (1%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYA--TTVPRCRTC 1019
MD+DDFRS+L+ +GVDVW+FIDTAI VA D+G ELK RRD IVARL+A ++ RCR
Sbjct: 1 MDIDDFRSILESSGVDVWNFIDTAIDVASLDFGSELKRRRDDIVARLFAASSSCSRCRDR 60
Query: 1018 DLEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLST- 842
+ N T +K L S +E SP TP S+N + D + +
Sbjct: 61 SFDDIDINNTANGNGMKDLAEKESSHEEEKGRRVYADSPVTPRSVNGDGDDEELDPFGGL 120
Query: 841 -DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPST 665
D E +IL IK+ LE DQ EDSLV+LLQ+L+DMDITF+ALKETDIGRHVN LRKHPS
Sbjct: 121 FDDEPKKILDIKQQLEDLDQPEDSLVDLLQSLADMDITFQALKETDIGRHVNRLRKHPSN 180
Query: 664 EVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNG-NQVLDFG 488
+V++LVKQLVRKWK++VD+WV+LN G+ A+S ++A GDSP+Q K NG +QV DF
Sbjct: 181 DVKRLVKQLVRKWKEIVDDWVRLNPHGERASSGLMAYGDSPQQ---KIPQNGRHQVPDFA 237
Query: 487 YSPNHHHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPISCTT 353
YSPN H+ S + P K A R + TK + + ++
Sbjct: 238 YSPNPHNGSSGSDRNNSEPERKPKLAPPRNEALTKPIKKSVPASS 282
Score = 67.0 bits (162), Expect(2) = 5e-76
Identities = 32/53 (60%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKP-SKNSFLARNKGG--VQARQW 141
A KRL NY+EA+NAKKQRTIQ +D+H++PKP +KN+F A+N+GG Q R W
Sbjct: 309 ASKRLQANYKEAENAKKQRTIQVMDIHEIPKPKNKNTFFAKNRGGGSHQGRHW 361
>ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X2 [Glycine max]
Length = 360
Score = 251 bits (640), Expect(2) = 9e-76
Identities = 147/292 (50%), Positives = 183/292 (62%), Gaps = 13/292 (4%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATTV--PRCRTC 1019
MDLDDFRSVL GVDVW FID AI+VA AD ELK RRDGIV RLYA T P+CR C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 1018 DLEAPRSNGTDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLST- 842
D NG +K S + ++ ASP+TP+S+ E D D DL
Sbjct: 61 DDGGNDLNGHQIKKQ-SSPSPERQPHQRRAAAIAAAASPATPQSL--ENDNDGEEDLDPY 117
Query: 841 ----DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKH 674
D EQ +IL IKE LE PDQSEDSLV LLQ+L+DMDITF+ALKETDIGRHVN LRKH
Sbjct: 118 GGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRKH 177
Query: 673 PSTEVRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSP--RQMPAKSIHNGNQV 500
PS +VR+LVK LVRKWK++VDEWVKLN G+ ++T++ADGDSP ++ H+ Q+
Sbjct: 178 PSNDVRRLVKLLVRKWKEIVDEWVKLNPQGR--SNTLMADGDSPPVQKTTQNGHHHQQQI 235
Query: 499 LDFGYSPNHHH----TDESSGFSKQTPVVDGKGAASRRDVQTKKSQSPISCT 356
DF YSPN H+ +D ++ ++ P V + + + +P S T
Sbjct: 236 PDFAYSPNPHNGSSGSDRNNSEAEHKPKVVPRSEPRPKPAPSPSVSTPASAT 287
Score = 62.8 bits (151), Expect(2) = 9e-76
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLP--KPSKNSFLARNK-----GGVQARQW 141
AR+RL ENY+EA+ AK+QRTIQ +D+H+LP KP N+F +NK GG Q R W
Sbjct: 304 ARRRLQENYKEAEIAKRQRTIQVMDIHELPKSKPKNNAFFGKNKGGGGGGGSQGRHW 360
>ref|XP_012447170.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Gossypium raimondii]
gi|763793261|gb|KJB60257.1| hypothetical protein
B456_009G296400 [Gossypium raimondii]
Length = 338
Score = 244 bits (623), Expect(2) = 9e-76
Identities = 144/277 (51%), Positives = 178/277 (64%), Gaps = 3/277 (1%)
Frame = -1
Query: 1192 MDLDDFRSVLKDTGVDVWDFIDTAISVACADYGEELKDRRDGIVARLYATT-VPRCRTCD 1016
MDLDDFRSVL+ GVDVW FIDTAI A DYGEELK RRDGIV RLYAT+ V C+TCD
Sbjct: 3 MDLDDFRSVLETAGVDVWTFIDTAILAASLDYGEELKQRRDGIVERLYATSMVNGCKTCD 62
Query: 1015 LEAPRSNG--TDKEKNIKSLEANASIEKEMSSHDGIGASPSTPESINREEDQDRTNDLST 842
RSNG +KE N+ E +G SP P+S N ++D D +
Sbjct: 63 F-GERSNGYSVNKEGNLH----------ESKGGEGRKGSPFKPQSDNEDDDLDPCGGVF- 110
Query: 841 DSEQSRILAIKEHLEVPDQSEDSLVNLLQTLSDMDITFKALKETDIGRHVNSLRKHPSTE 662
D EQ R+L IK+ LEVPDQSEDSLV+LLQ+L+DMDITF+ALKETDIGRHVN RKH S +
Sbjct: 111 DVEQKRVLEIKDLLEVPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKFRKHSSND 170
Query: 661 VRKLVKQLVRKWKDLVDEWVKLNTSGQTAASTIIADGDSPRQMPAKSIHNGNQVLDFGYS 482
VR+LVKQLVRKWKD+VD+WV +N G+ ++ ++ D DSP+Q + + G QV D YS
Sbjct: 171 VRRLVKQLVRKWKDIVDKWVMVNQPGEHESAALM-DRDSPQQKLPQ--NGGQQVPDDVYS 227
Query: 481 PNHHHTDESSGFSKQTPVVDGKGAASRRDVQTKKSQS 371
PN H+ + P K R+D + + S
Sbjct: 228 PNPHNGSLGLNKNNSEPERKLKSIPHRKDPPIRHTHS 264
Score = 69.3 bits (168), Expect(2) = 9e-76
Identities = 33/51 (64%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Frame = -3
Query: 290 ARKRLHENYQEAQNAKKQRTIQKLDLHDLPKPSKNSFLARNKG-GVQARQW 141
ARKRL E+Y+EA+NAK+QRT+Q +D+++LPKP KN F A+NKG G Q RQW
Sbjct: 289 ARKRLQESYKEAENAKRQRTVQVMDINELPKP-KNGFFAKNKGSGSQGRQW 338