BLASTX nr result

ID: Cinnamomum25_contig00011853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00011853
         (246 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010259328.1| PREDICTED: DNA mismatch repair protein MSH6 ...    56   8e-06
ref|XP_010259327.1| PREDICTED: DNA mismatch repair protein MSH6 ...    56   8e-06
ref|XP_010259326.1| PREDICTED: DNA mismatch repair protein MSH6 ...    56   8e-06

>ref|XP_010259328.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X3 [Nelumbo
           nucifera]
          Length = 1135

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -2

Query: 170 MAPSRRLSNGRSPLVNQQRQITSFFTPG 87
           MAPSRRLSNGRSPLV+QQRQITSFF+PG
Sbjct: 1   MAPSRRLSNGRSPLVSQQRQITSFFSPG 28


>ref|XP_010259327.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X2 [Nelumbo
           nucifera]
          Length = 1174

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -2

Query: 170 MAPSRRLSNGRSPLVNQQRQITSFFTPG 87
           MAPSRRLSNGRSPLV+QQRQITSFF+PG
Sbjct: 1   MAPSRRLSNGRSPLVSQQRQITSFFSPG 28


>ref|XP_010259326.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X1 [Nelumbo
           nucifera]
          Length = 1312

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = -2

Query: 170 MAPSRRLSNGRSPLVNQQRQITSFFTPG 87
           MAPSRRLSNGRSPLV+QQRQITSFF+PG
Sbjct: 1   MAPSRRLSNGRSPLVSQQRQITSFFSPG 28


Top