BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00011747
         (3809 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275543.1| PREDICTED: SNF2 domain-containing protein CL...  1021   0.0  
ref|XP_010275546.1| PREDICTED: SNF2 domain-containing protein CL...  1020   0.0  
ref|XP_009403389.1| PREDICTED: SNF2 domain-containing protein CL...  1009   0.0  
ref|XP_010932641.1| PREDICTED: SNF2 domain-containing protein CL...   993   0.0  
ref|XP_010917669.1| PREDICTED: SNF2 domain-containing protein CL...   988   0.0  
ref|XP_008794072.1| PREDICTED: SNF2 domain-containing protein CL...   932   0.0  
ref|XP_007042095.1| SNF2 domain-containing protein / helicase do...   917   0.0  
ref|XP_007042093.1| SNF2 domain-containing protein / helicase do...   917   0.0  
ref|XP_012463016.1| PREDICTED: SNF2 domain-containing protein CL...   912   0.0  
ref|XP_012463020.1| PREDICTED: SNF2 domain-containing protein CL...   911   0.0  
ref|XP_012463017.1| PREDICTED: SNF2 domain-containing protein CL...   911   0.0  
ref|XP_012463014.1| PREDICTED: SNF2 domain-containing protein CL...   911   0.0  
ref|XP_012463012.1| PREDICTED: SNF2 domain-containing protein CL...   911   0.0  
ref|XP_012463008.1| PREDICTED: SNF2 domain-containing protein CL...   911   0.0  
ref|XP_012463011.1| PREDICTED: SNF2 domain-containing protein CL...   911   0.0  
gb|KJB79136.1| hypothetical protein B456_013G034700 [Gossypium r...   910   0.0  
ref|XP_012463018.1| PREDICTED: SNF2 domain-containing protein CL...   910   0.0  
ref|XP_012463019.1| PREDICTED: SNF2 domain-containing protein CL...   910   0.0  
ref|XP_012463013.1| PREDICTED: SNF2 domain-containing protein CL...   910   0.0  
ref|XP_012463015.1| PREDICTED: SNF2 domain-containing protein CL...   910   0.0  

>ref|XP_010275543.1| PREDICTED: SNF2 domain-containing protein CLASSY 3 isoform X1
            [Nelumbo nucifera] gi|720062785|ref|XP_010275545.1|
            PREDICTED: SNF2 domain-containing protein CLASSY 3
            isoform X1 [Nelumbo nucifera]
          Length = 1031

 Score = 1021 bits (2639), Expect = 0.0
 Identities = 574/1054 (54%), Positives = 718/1054 (68%), Gaps = 22/1054 (2%)
 Frame = -3

Query: 3411 EFDPYAQDVRAKSHTDKFGQFHMRY----LDKLNGLRASSKERVKHPSSNVTDYSDPYAL 3244
            +F+ Y++         K   F+ R     +  + G+R+  + + + PS  V DYSDP+A+
Sbjct: 33   KFEKYSRSESYSWSQKKMKMFNERKGISSISWIAGIRSEPEYKDRTPSK-VLDYSDPFAV 91

Query: 3243 RKHLDCLGDGEYGSVTKEYEEVHAQWIQLRNLLTSAYPTXXXXXXXXXXXXIVNLMXXXX 3064
               L+ L  G++GSVT E E++ A+ +Q+   L + YP+                +    
Sbjct: 92   PNLLEGLDSGKFGSVTNEIEDLRARKMQMLYPLFAKYPSFFSSYVESVSQSP--RVTEKP 149

Query: 3063 XXXXXXXQGVIDLDID-----CPSSADV------SLEAMHEFGGSNTPCLPGSSSSVMYG 2917
                   Q VIDLD D     CP + +       S   MH++            SS++  
Sbjct: 150  QNIHLASQVVIDLDADSVENDCPVTENSYPLHKSSSGEMHQYD---------DHSSIVVD 200

Query: 2916 KITDAPYDLSDHHKNKDGMDNISVIVLDSDEDNDGDRIENKHASNSEAKALREFQTKSLN 2737
            K TD   +L +H+ N       S++V+DSDE++ GD I  +H+S  +   +  FQ+    
Sbjct: 201  K-TDC-INLQNHNNN-------SIVVIDSDEEDGGDGIGTRHSSILDLPVVSLFQSPF-- 249

Query: 2736 SQKKQMRQGCD-VPGNGSTCGNITVDANWQFPSPFQKVVLSSVDGTAVNDIVPMIEFRPX 2560
                 ++ G D +P N     +I +   +Q P+    V L++  G  ++  V        
Sbjct: 250  ----NVKNGTDLIPHN-----SILLHKVFQ-PAHGNHVQLNA--GMGLSGPVEANRKASY 297

Query: 2559 XXXXXXXXSPNHKTYQRSKHKRTKRLKVTDCTEIIVGKEQVNKDSGKEHDANAELNPYVD 2380
                     P +    R        L    C ++   +E+   DSG       +L  YV 
Sbjct: 298  HYEEVVLRKPANVNPIRD-------LSAKQCLKVDAAREK-EADSGSTE--RRDLGVYVG 347

Query: 2379 LQDDIMTLESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEK------GEIECDH 2218
            + DD M+ +S  +  +E+DGL D+W+EMTLA+E SK+AA++ S  E+      GE EC+H
Sbjct: 348  VSDDEMSEKSNDQSNVEDDGLGDIWREMTLALECSKEAAAEMSAFEQSGGEEEGE-ECNH 406

Query: 2217 SCFLKDDLGYVCRICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRH 2038
            S  LKDD+GYVCR+CGVI++ IETIFDYQWIK T+STRTY SE R+          FS  
Sbjct: 407  SFVLKDDIGYVCRVCGVIERRIETIFDYQWIKSTKSTRTYTSEARNIKDGDKTEVAFSGL 466

Query: 2037 SDLEHELIAAEISVHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMII 1858
            +  E +  AAEI VHPRH K+MKPHQ+EGF+FL RNLVT++PGGCI+AHAPGSGKTFMII
Sbjct: 467  NFSEDDFTAAEIHVHPRHFKKMKPHQVEGFHFLARNLVTEEPGGCILAHAPGSGKTFMII 526

Query: 1857 SFIQSFLAKYPHARPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLE 1678
            SF+QSFLAKYP ARPLVVLPKGIL+TWKKEFQ+WQVEDIPL DFYS+KA+NR+QQL+VL+
Sbjct: 527  SFMQSFLAKYPQARPLVVLPKGILATWKKEFQKWQVEDIPLHDFYSSKAENRTQQLDVLK 586

Query: 1677 DWVEHRSILFLGYKQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLH 1498
             WVEH+SILFLGYKQF+NIVC S   K A ACQ+ LL VP++LILDEGHTPRNENTDVL 
Sbjct: 587  KWVEHKSILFLGYKQFSNIVCDSETSKTAVACQDILLKVPSILILDEGHTPRNENTDVLQ 646

Query: 1497 SLAKVKTPRKVVLSGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSR 1318
            SLAKV+T RKVVLSGTLFQNHV+EVFNI NLVRPKFL+L+T           V+I GG +
Sbjct: 647  SLAKVQTARKVVLSGTLFQNHVKEVFNIFNLVRPKFLRLDTSRSVVRRVMSRVHIPGG-K 705

Query: 1317 RQCRTGQDTTFFDLVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDF 1138
            R  R+  +  FF+ VE TLQNDEDF+RK+ VIQDLREMT +VLHYYKGDFL+ELPGLVDF
Sbjct: 706  RLSRSSMEAVFFETVEATLQNDEDFRRKVVVIQDLREMTKDVLHYYKGDFLEELPGLVDF 765

Query: 1137 TVLLNLTPRQKELVKRLKHLEKFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGI 958
            TV+LNLTP+QK  V++L+ LEKFK+ SVG AVYMHP+LKD SE+           G++G 
Sbjct: 766  TVVLNLTPKQKHAVEKLQKLEKFKKRSVGCAVYMHPHLKDFSESGSS--------GEKGG 817

Query: 957  TFNDEKIDQLVEKMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFK 778
             FNDEKID L+EK+DV+DGVKTKFFLNILGL ESAGEKLLVFSQYLLPLKFLER+L+  K
Sbjct: 818  NFNDEKIDNLLEKIDVKDGVKTKFFLNILGLCESAGEKLLVFSQYLLPLKFLERLLVRTK 877

Query: 777  GWSPGKEIFMISGDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDV 598
            GW  G+EIF+ISGDSN E RE SM+ FN+SPDAKVFFGSIKACGEGISLVGASR++ILDV
Sbjct: 878  GWIVGREIFIISGDSNPEQRESSMESFNSSPDAKVFFGSIKACGEGISLVGASRVMILDV 937

Query: 597  HLNPSVTRQAIGRAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCG 418
            HLNPSV+RQAIGRAFRPGQ +KVY YRL+AADSPE  DHNT FRKELISKMWFEWSEL G
Sbjct: 938  HLNPSVSRQAIGRAFRPGQGRKVYTYRLVAADSPEVEDHNTCFRKELISKMWFEWSELSG 997

Query: 417  SRDFEMEEIDINDSEDLFLESPLLGEDVKLLYKR 316
             +DFEME +D+ +  DLFLESPLLGEDVK+LYKR
Sbjct: 998  HQDFEMETVDMKNCNDLFLESPLLGEDVKVLYKR 1031


>ref|XP_010275546.1| PREDICTED: SNF2 domain-containing protein CLASSY 3 isoform X2
            [Nelumbo nucifera]
          Length = 982

 Score = 1020 bits (2638), Expect = 0.0
 Identities = 569/1020 (55%), Positives = 706/1020 (69%), Gaps = 18/1020 (1%)
 Frame = -3

Query: 3321 GLRASSKERVKHPSSNVTDYSDPYALRKHLDCLGDGEYGSVTKEYEEVHAQWIQLRNLLT 3142
            G+R+  + + + PS  V DYSDP+A+   L+ L  G++GSVT E E++ A+ +Q+   L 
Sbjct: 18   GIRSEPEYKDRTPSK-VLDYSDPFAVPNLLEGLDSGKFGSVTNEIEDLRARKMQMLYPLF 76

Query: 3141 SAYPTXXXXXXXXXXXXIVNLMXXXXXXXXXXXQGVIDLDID-----CPSSADV------ 2995
            + YP+                +           Q VIDLD D     CP + +       
Sbjct: 77   AKYPSFFSSYVESVSQSP--RVTEKPQNIHLASQVVIDLDADSVENDCPVTENSYPLHKS 134

Query: 2994 SLEAMHEFGGSNTPCLPGSSSSVMYGKITDAPYDLSDHHKNKDGMDNISVIVLDSDEDND 2815
            S   MH++            SS++  K TD   +L +H+ N       S++V+DSDE++ 
Sbjct: 135  SSGEMHQYD---------DHSSIVVDK-TDC-INLQNHNNN-------SIVVIDSDEEDG 176

Query: 2814 GDRIENKHASNSEAKALREFQTKSLNSQKKQMRQGCD-VPGNGSTCGNITVDANWQFPSP 2638
            GD I  +H+S  +   +  FQ+         ++ G D +P N     +I +   +Q P+ 
Sbjct: 177  GDGIGTRHSSILDLPVVSLFQSPF------NVKNGTDLIPHN-----SILLHKVFQ-PAH 224

Query: 2637 FQKVVLSSVDGTAVNDIVPMIEFRPXXXXXXXXXSPNHKTYQRSKHKRTKRLKVTDCTEI 2458
               V L++  G  ++  V                 P +    R        L    C ++
Sbjct: 225  GNHVQLNA--GMGLSGPVEANRKASYHYEEVVLRKPANVNPIRD-------LSAKQCLKV 275

Query: 2457 IVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTLESRRKVEIENDGLTDMWKEMTLAMEF 2278
               +E+   DSG       +L  YV + DD M+ +S  +  +E+DGL D+W+EMTLA+E 
Sbjct: 276  DAAREK-EADSGSTE--RRDLGVYVGVSDDEMSEKSNDQSNVEDDGLGDIWREMTLALEC 332

Query: 2277 SKDAASDNSVVEK------GEIECDHSCFLKDDLGYVCRICGVIQKSIETIFDYQWIKGT 2116
            SK+AA++ S  E+      GE EC+HS  LKDD+GYVCR+CGVI++ IETIFDYQWIK T
Sbjct: 333  SKEAAAEMSAFEQSGGEEEGE-ECNHSFVLKDDIGYVCRVCGVIERRIETIFDYQWIKST 391

Query: 2115 RSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEISVHPRHMKQMKPHQLEGFNFLL 1936
            +STRTY SE R+          FS  +  E +  AAEI VHPRH K+MKPHQ+EGF+FL 
Sbjct: 392  KSTRTYTSEARNIKDGDKTEVAFSGLNFSEDDFTAAEIHVHPRHFKKMKPHQVEGFHFLA 451

Query: 1935 RNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHARPLVVLPKGILSTWKKEFQRW 1756
            RNLVT++PGGCI+AHAPGSGKTFMIISF+QSFLAKYP ARPLVVLPKGIL+TWKKEFQ+W
Sbjct: 452  RNLVTEEPGGCILAHAPGSGKTFMIISFMQSFLAKYPQARPLVVLPKGILATWKKEFQKW 511

Query: 1755 QVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGYKQFANIVCGSTNDKMAAACQE 1576
            QVEDIPL DFYS+KA+NR+QQL+VL+ WVEH+SILFLGYKQF+NIVC S   K A ACQ+
Sbjct: 512  QVEDIPLHDFYSSKAENRTQQLDVLKKWVEHKSILFLGYKQFSNIVCDSETSKTAVACQD 571

Query: 1575 RLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVLSGTLFQNHVREVFNILNLVRP 1396
             LL VP++LILDEGHTPRNENTDVL SLAKV+T RKVVLSGTLFQNHV+EVFNI NLVRP
Sbjct: 572  ILLKVPSILILDEGHTPRNENTDVLQSLAKVQTARKVVLSGTLFQNHVKEVFNIFNLVRP 631

Query: 1395 KFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFDLVEETLQNDEDFKRKITVIQD 1216
            KFL+L+T           V+I GG +R  R+  +  FF+ VE TLQNDEDF+RK+ VIQD
Sbjct: 632  KFLRLDTSRSVVRRVMSRVHIPGG-KRLSRSSMEAVFFETVEATLQNDEDFRRKVVVIQD 690

Query: 1215 LREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKELVKRLKHLEKFKRSSVGSAVYM 1036
            LREMT +VLHYYKGDFL+ELPGLVDFTV+LNLTP+QK  V++L+ LEKFK+ SVG AVYM
Sbjct: 691  LREMTKDVLHYYKGDFLEELPGLVDFTVVLNLTPKQKHAVEKLQKLEKFKKRSVGCAVYM 750

Query: 1035 HPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVEKMDVRDGVKTKFFLNILGLSES 856
            HP+LKD SE+           G++G  FNDEKID L+EK+DV+DGVKTKFFLNILGL ES
Sbjct: 751  HPHLKDFSESGSS--------GEKGGNFNDEKIDNLLEKIDVKDGVKTKFFLNILGLCES 802

Query: 855  AGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMISGDSNSEHREWSMDQFNNSPDAK 676
            AGEKLLVFSQYLLPLKFLER+L+  KGW  G+EIF+ISGDSN E RE SM+ FN+SPDAK
Sbjct: 803  AGEKLLVFSQYLLPLKFLERLLVRTKGWIVGREIFIISGDSNPEQRESSMESFNSSPDAK 862

Query: 675  VFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIGRAFRPGQLKKVYAYRLIAADSP 496
            VFFGSIKACGEGISLVGASR++ILDVHLNPSV+RQAIGRAFRPGQ +KVY YRL+AADSP
Sbjct: 863  VFFGSIKACGEGISLVGASRVMILDVHLNPSVSRQAIGRAFRPGQGRKVYTYRLVAADSP 922

Query: 495  EETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDINDSEDLFLESPLLGEDVKLLYKR 316
            E  DHNT FRKELISKMWFEWSEL G +DFEME +D+ +  DLFLESPLLGEDVK+LYKR
Sbjct: 923  EVEDHNTCFRKELISKMWFEWSELSGHQDFEMETVDMKNCNDLFLESPLLGEDVKVLYKR 982


>ref|XP_009403389.1| PREDICTED: SNF2 domain-containing protein CLASSY 4-like [Musa
            acuminata subsp. malaccensis]
          Length = 1015

 Score = 1009 bits (2610), Expect = 0.0
 Identities = 543/1017 (53%), Positives = 696/1017 (68%), Gaps = 28/1017 (2%)
 Frame = -3

Query: 3282 SSNVTDYSDPYALRKHLDCLGDGEYGSVTKEYEEVHAQWIQLRNLLTSAYPTXXXXXXXX 3103
            SS V DYS+ +AL   L+ L DG+YGSVTKEYE +H+Q +Q+ N L++  P+        
Sbjct: 37   SSKVIDYSNDFALTNLLERLEDGKYGSVTKEYEALHSQRMQVINFLSALQPSIASRTFQG 96

Query: 3102 XXXXIVNL-----MXXXXXXXXXXXQGVIDLDIDCPSSAD----VSLEAMHEFGGSNTPC 2950
                  NL                   +IDL++D    A     + +E   +  G+ +  
Sbjct: 97   GGSTSTNLSTRQNQMKSGQHGDNLSHDIIDLEVDTMEGAANPVRIPVEQTQDAVGNISLH 156

Query: 2949 LPGSSSSVMYGKITDAPYDLSDHHKNKDGMDNISVIVLDSDEDNDGDRIENKHASNSEAK 2770
                 S    GK+  A   L+    ++D  +  +VI++DSDE++   + + K+  + + +
Sbjct: 157  SSDFESVTRKGKLDAARGPLNTPPVDEDNKEETTVIIVDSDEEDASHQGKTKYDCHPDHE 216

Query: 2769 ALREFQTKSLNSQKKQMRQGCDVP-------------GNGSTCGNITVDANWQFPSPFQK 2629
             L EF     +  +K + +   +              G G +        NWQ    F+K
Sbjct: 217  VL-EFGASLASQIQKHISRASKLAQEVNLYQLVPYDQGIGRSVCTTNFKPNWQPSVHFEK 275

Query: 2628 VVLSSVDGTA-VNDIVPMIEFRPXXXXXXXXXSPNHKTYQRSKHKRTKR--LKVTDCTEI 2458
            VVL +VD      D+V                       +++   R +R   +  +  + 
Sbjct: 276  VVLQTVDEKQRFQDVVD----------------------EKNMEMRCERQAAEAPNVVKT 313

Query: 2457 IVGKEQVNKDSGKEHDANAEL---NPYVDLQDDIMTLESRRKVEIENDGLTDMWKEMTLA 2287
            +    ++NK+  KE D N +        D+   + +L    KV  ++DGL D+WK+M+LA
Sbjct: 314  LYSNAEMNKE--KECDGNPKFVSSTAIKDISSGMGSLYEVDKVSSQSDGLEDLWKDMSLA 371

Query: 2286 MEFSKDAASDNSVVEKGEIECDHSCFLKDDLGYVCRICGVIQKSIETIFDYQWIKGTRST 2107
            ME+SK   SD+  + + E EC+HS  L+DD G VCRICGVIQK I+TIFD+QW KG+R+T
Sbjct: 372  MEYSKIDTSDDQALVQQEEECNHSYLLQDDFGLVCRICGVIQKRIDTIFDFQWTKGSRAT 431

Query: 2106 RTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEISVHPRHMKQMKPHQLEGFNFLLRNL 1927
            RTY++     G  +  +  +S     E + IAAE+S+HPRH+KQMKPHQLEGFNFL++NL
Sbjct: 432  RTYLT---GPGNSKDLVAHYSGLEVSEDDFIAAELSIHPRHLKQMKPHQLEGFNFLVKNL 488

Query: 1926 VTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHARPLVVLPKGILSTWKKEFQRWQVE 1747
            VTDKPGGCI+AHAPGSGKTFM+ISFIQSFLAKYP  +PLV+LPKGIL TWKKEFQRWQVE
Sbjct: 489  VTDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPLKKPLVILPKGILPTWKKEFQRWQVE 548

Query: 1746 DIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGYKQFANIVCGSTNDKMAAACQERLL 1567
            D+P+ DFYS+KADNRSQQLEVL+ W E++SILFLGYKQF NI+    N K++AAC+E LL
Sbjct: 549  DLPIYDFYSSKADNRSQQLEVLKLWQENKSILFLGYKQFTNIIYDKENSKVSAACREMLL 608

Query: 1566 TVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVLSGTLFQNHVREVFNILNLVRPKFL 1387
             +P+LLILDEGHTPRNE+T VL SLAKV+TPRKVVLSGTLFQNHVREVFNILNLVRPKFL
Sbjct: 609  KIPSLLILDEGHTPRNEDTFVLDSLAKVQTPRKVVLSGTLFQNHVREVFNILNLVRPKFL 668

Query: 1386 KLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFDLVEETLQNDEDFKRKITVIQDLRE 1207
            ++ET           + I+GG R+  ++  D  F+DLVEETLQ+DE+FKRK+TVI+DLRE
Sbjct: 669  RMETSRVIVKRVLSRIYISGG-RKLSKSSVDNAFYDLVEETLQHDENFKRKVTVIRDLRE 727

Query: 1206 MTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKELVKRLKHLEKFKRSSVGSAVYMHPN 1027
            +T +VLHYYKGDFL+ELPGLVDFTVLLNL+ +Q+  V++L   EKFKR+S+GSAVY+HP+
Sbjct: 728  LTKDVLHYYKGDFLEELPGLVDFTVLLNLSAKQRVYVQKLAKFEKFKRTSMGSAVYIHPH 787

Query: 1026 LKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVEKMDVRDGVKTKFFLNILGLSESAGE 847
            L D +E A          GDR   FND+KID L+E +++RDGVKTKFFLNIL L+ESAGE
Sbjct: 788  LYDTAEKAS---------GDRVAFFNDDKIDSLLESLNIRDGVKTKFFLNILSLAESAGE 838

Query: 846  KLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMISGDSNSEHREWSMDQFNNSPDAKVFF 667
            KLL FSQY+LPLKFLER+++  KGW  GKEIFMISGDS SE REWSM+QFNNSPDAKVFF
Sbjct: 839  KLLAFSQYILPLKFLERLIVKTKGWHLGKEIFMISGDSTSEQREWSMEQFNNSPDAKVFF 898

Query: 666  GSIKACGEGISLVGASRILILDVHLNPSVTRQAIGRAFRPGQLKKVYAYRLIAADSPEET 487
            GSIKACGEGISLVGASR++ILDVH NPSVTRQAIGRAFRPGQLKKVY YRL+AADSPEE 
Sbjct: 899  GSIKACGEGISLVGASRVVILDVHFNPSVTRQAIGRAFRPGQLKKVYIYRLVAADSPEEE 958

Query: 486  DHNTSFRKELISKMWFEWSELCGSRDFEMEEIDINDSEDLFLESPLLGEDVKLLYKR 316
             H TSF KE ISKMWFEWSE CG ++FE++E+D+   EDLFLESP++GED+K +Y+R
Sbjct: 959  FHYTSFSKEFISKMWFEWSEYCGHQNFELDEVDLASCEDLFLESPIIGEDIKAVYRR 1015


>ref|XP_010932641.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Elaeis
            guineensis]
          Length = 1037

 Score =  993 bits (2567), Expect = 0.0
 Identities = 564/1049 (53%), Positives = 698/1049 (66%), Gaps = 40/1049 (3%)
 Frame = -3

Query: 3342 RYLDKLNGLRASSKERVKHPSSNVTDYSDPYALRKHLDCLGDGEYGSVTKEYEEVHAQWI 3163
            RY  ++  L +  ++  +  SS V DYS+P+AL   L+ L DG YGSVTKEYE +H++ +
Sbjct: 35   RYKSEVAALCSGFEKIKEKSSSKVIDYSNPFALSNLLERLDDGIYGSVTKEYETLHSKRM 94

Query: 3162 QLRNLLTSAYPTXXXXXXXXXXXXIVNL-----------MXXXXXXXXXXXQGVIDLDID 3016
            Q+   L++  P+               +                         +IDL+ D
Sbjct: 95   QVIKFLSTLPPSLANSYPSLLSSSHHGINTWSHLSTRGNQNSDRRVDSSISSDIIDLEAD 154

Query: 3015 -----CPSSADVSLEAMHEFGGSNTPCLPGSSSSVMYGKITDAPYDLSDH-HKNKDGMDN 2854
                   +S  +S E  HE    N       S   M+ KI D     SD   K K+G D+
Sbjct: 155  SIDAAANTSMRMSAEKTHESSVQNI-LYCADSDYRMHRKIPDVANGPSDSCPKYKEGRDS 213

Query: 2853 ISVIVLDSDEDNDGDRIENKHASNSEAKA----------LREFQTKSLNSQKKQMRQGCD 2704
             SVI+LDSD+++   +  ++HAS S  K+          L   Q +++ +Q+  + Q   
Sbjct: 214  TSVIILDSDDEDAIQQTGSQHASPSGRKSSDLRKLIGARLESLQRQAMITQETHLNQIIP 273

Query: 2703 VP-GNGSTCGNITVDANWQFPSPFQKVVLSSV-DGTAVNDIVPMIEFRPXXXXXXXXXSP 2530
               G+    G++ +  NWQ    +QKVVL  V +     D+V                  
Sbjct: 274  YDYGSNKLDGSVALRENWQPSVQYQKVVLQKVPEKQRFQDLVNQ---------------- 317

Query: 2529 NHKTYQRSKHKRTKRLKVTDCTEIIVGKEQVNKDSGKEHDANAELNPYVDLQD--DIMTL 2356
                 +R + +  K L +   TE             K+ D N+ L     +Q+   IM +
Sbjct: 318  -DYAEKRGERQDGKALALEMTTE-------------KKTDVNSMLVSSAAMQEHPSIMGI 363

Query: 2355 ESRRKVE-IENDG--LTDMWKEMTLAMEFSKD------AASDNSVVEKGEIECDHSCFLK 2203
              + + E +END   L D+WKEM+LAME SK       AA      E+ E EC HS  L+
Sbjct: 364  CQKNEAENLENDEHQLDDLWKEMSLAMECSKSPKYDEPAAVQEEEEEEEEEECKHSPVLQ 423

Query: 2202 DDLGYVCRICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEH 2023
            DDLG VCRICGVIQKSI+TIF+YQW K  R+ R ++S +R+   D     ++  H  +  
Sbjct: 424  DDLGIVCRICGVIQKSIDTIFEYQWAKAPRAARIHMSGSRNTK-DVDETFQYFGHK-ISE 481

Query: 2022 ELIAAEISVHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQS 1843
            + +AA+IS+HPRH+KQMKPHQLEGFNFL+RNLV DKPGGCI+AHAPG+GKTFM+ISF+QS
Sbjct: 482  DFMAADISIHPRHLKQMKPHQLEGFNFLVRNLVNDKPGGCILAHAPGTGKTFMLISFVQS 541

Query: 1842 FLAKYPHARPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEH 1663
            FLAKYP ARPLVVLPKGIL  WKKEFQ+WQVEDIPL DFYS+KADNRSQQLEVL  W E+
Sbjct: 542  FLAKYPFARPLVVLPKGILPVWKKEFQQWQVEDIPLYDFYSSKADNRSQQLEVLRSWQEN 601

Query: 1662 RSILFLGYKQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKV 1483
             SILFLGYKQF NI+C +   K+A+AC+E LL VPTLLILDEGHTPRNENT VL SLAKV
Sbjct: 602  SSILFLGYKQFTNIICDNDASKIASACRESLLKVPTLLILDEGHTPRNENTYVLDSLAKV 661

Query: 1482 KTPRKVVLSGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRT 1303
            +TPRKVVLSGTLFQNHVREVF ILNLVRPKFL+L+T           V+I+       R 
Sbjct: 662  QTPRKVVLSGTLFQNHVREVFTILNLVRPKFLRLDTSRDAVNRILSRVDISSCK----RL 717

Query: 1302 GQDTTFFDLVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLN 1123
             + + F+DLVEETLQ+D++FKRK+ VIQDLREMT +VLHYYKGDFLDELPGLVDFTVLL 
Sbjct: 718  SKSSKFYDLVEETLQHDDNFKRKVRVIQDLREMTEDVLHYYKGDFLDELPGLVDFTVLLK 777

Query: 1122 LTPRQKELVKRLKHLEKFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDE 943
            ++ +QK +V+ LK  EKFK+SSVGSAVY+HP+L DI EN  GD K         + F+DE
Sbjct: 778  VSAKQKAIVQTLKKFEKFKKSSVGSAVYIHPHLLDILENTAGDNK---------VYFDDE 828

Query: 942  KIDQLVEKMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPG 763
            KID L++ ++VRDGVKTKFFLNIL LS+SAGEK+L FS Y+LPLKFLER+L+  KGW  G
Sbjct: 829  KIDGLLDSVNVRDGVKTKFFLNILSLSQSAGEKVLAFSHYILPLKFLERLLVKMKGWHSG 888

Query: 762  KEIFMISGDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPS 583
            KEIFMISGDS+ E RE +M+QFNNSPDAKVFFGSIKACGEGISLVGASRI+ILDVHLNPS
Sbjct: 889  KEIFMISGDSSPEQRELAMEQFNNSPDAKVFFGSIKACGEGISLVGASRIVILDVHLNPS 948

Query: 582  VTRQAIGRAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFE 403
            VTRQAIGRAFRPGQ KKVY YRL+AADSPEE DH TSFRKELISKMWFEWSE C  RDFE
Sbjct: 949  VTRQAIGRAFRPGQEKKVYTYRLVAADSPEEEDHETSFRKELISKMWFEWSEYCDYRDFE 1008

Query: 402  MEEIDINDSEDLFLESPLLGEDVKLLYKR 316
            ++EIDI   +D+FLESP+L EDVK+LY+R
Sbjct: 1009 LDEIDIASCQDVFLESPILTEDVKVLYRR 1037


>ref|XP_010917669.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Elaeis
            guineensis] gi|743774621|ref|XP_010917670.1| PREDICTED:
            SNF2 domain-containing protein CLASSY 3-like [Elaeis
            guineensis]
          Length = 988

 Score =  988 bits (2555), Expect = 0.0
 Identities = 551/986 (55%), Positives = 674/986 (68%), Gaps = 11/986 (1%)
 Frame = -3

Query: 3240 KHLDCLGDGEYGSVTKEYEEVHAQWIQLRNLLTSAYPTXXXXXXXXXXXXIVNLMXXXXX 3061
            K L  + D +YGSVTKEYE +HAQ +Q+ N L +                          
Sbjct: 70   KLLKGMDDRKYGSVTKEYETLHAQRVQMINFLQAQQ------------------------ 105

Query: 3060 XXXXXXQGVIDLDIDCPSSADVSLEAMHEFGGSNTPCLPGSSSSVMYGK---ITDAPYDL 2890
                   G         SS  VS+   +     ++ C+ G+S S M  K   IT     L
Sbjct: 106  ----CPLGDPCSSPGLKSSQSVSIACFNP----SSECVEGNSDSTMQKKMRHITSGSSYL 157

Query: 2889 SDHHKNKDGMDNISVIVLDSDEDNDGDRIENKHASNSEAKALREFQTKSLNSQKKQMRQG 2710
                K K+  +  SVI++DSD+++   R   K++  SE + + EFQ    +     +RQ 
Sbjct: 158  CP--KTKEHKNKTSVIIIDSDDEDGVCRKGTKNSCISECQ-VHEFQAWLSSELHLCLRQA 214

Query: 2709 CDVPGNGSTCGNITVDANWQFPSPFQ-KVVLSSVDGTAVNDIVPMIEFRPXXXXXXXXXS 2533
                      G +  D +   P+  + K V  + D  A   + P +++            
Sbjct: 215  ----------GLLAWDGHSNQPAASERKNVKFAHDFAATGKVPPSVQYEAVVLSKVMEKQ 264

Query: 2532 P--NHKTYQRSKHKRTKRLKVTDCTEIIVGKEQVNKDS----GKEHDANAELNPYVDLQD 2371
            P  + +  +    K  K    T C+E  V KE     S    G  HD  + +  +     
Sbjct: 265  PIQDLENQKYEVRKGQKEEAETFCSEDNVAKESDASSSPVSFGGRHDHKSIMEHH---DQ 321

Query: 2370 DIMTLESRRKVEIENDGLTDMWKEMTLAMEFSKDAAS-DNSVVEKGEIECDHSCFLKDDL 2194
            D+  +        +NDGL D+WK+M+LA+E+SK   S D S       +C+HS  L+DDL
Sbjct: 322  DVKGVS-------DNDGLEDLWKDMSLAIEYSKGVTSLDGSEPVLEVQQCNHSFLLEDDL 374

Query: 2193 GYVCRICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELI 2014
            G VCRICGVI+KSIETIFDYQW+KG R+ R  +S ++ +  D  G+ ++S     EHELI
Sbjct: 375  GLVCRICGVIEKSIETIFDYQWMKGPRAIRMSMSGSKKSK-DVDGL-KYSESKISEHELI 432

Query: 2013 AAEISVHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLA 1834
            AA+IS+HPRH KQMKPHQ+EGF+FL++NLVT+KPGGCI+AHAPGSGKTF++ISFIQSFLA
Sbjct: 433  AADISIHPRHTKQMKPHQMEGFSFLVKNLVTEKPGGCILAHAPGSGKTFVLISFIQSFLA 492

Query: 1833 KYPHARPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSI 1654
            KYP ARPLVVLPKGIL TWKKEF+ WQVEDI L DFYS KAD+RSQQL+VL+ W  +RSI
Sbjct: 493  KYPFARPLVVLPKGILETWKKEFKHWQVEDILLYDFYSLKADSRSQQLDVLKSWEGNRSI 552

Query: 1653 LFLGYKQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTP 1474
            LFLGYKQFANIVCG   D +AAACQE+LL VP+LLILDEGHTPRNENTDVLHSLAKV+TP
Sbjct: 553  LFLGYKQFANIVCGGVVDSIAAACQEKLLKVPSLLILDEGHTPRNENTDVLHSLAKVQTP 612

Query: 1473 RKVVLSGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQD 1294
            RKVVLSGTLFQNHVREVFNILNLV PKFLK+E+           V I+ G+RR  R G D
Sbjct: 613  RKVVLSGTLFQNHVREVFNILNLVCPKFLKMESSRALVKRILSRVKIS-GNRRLSRNGTD 671

Query: 1293 TTFFDLVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTP 1114
              F+DL+EETLQND+ +KR++TVIQDLRE+T NVLHYYKGDFL+ELPGLVDFTVLLNL+ 
Sbjct: 672  NCFYDLIEETLQNDDSYKRRVTVIQDLRELTKNVLHYYKGDFLEELPGLVDFTVLLNLSS 731

Query: 1113 RQKELVKRLKHLEKFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKID 934
            +QKE+V+ L   EKFKRSSVGSA+Y+HP LKDISE         NA GDR   F+DEK +
Sbjct: 732  KQKEIVRELGKFEKFKRSSVGSAIYIHPKLKDISE---------NAAGDRDSIFSDEKFE 782

Query: 933  QLVEKMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEI 754
             +++ M+VRDGVKTKFFLN+L LSESAGEKLLVFS YLL LKFLER++IN KGW  GKEI
Sbjct: 783  NILDSMNVRDGVKTKFFLNLLSLSESAGEKLLVFSHYLLSLKFLERLVINMKGWRLGKEI 842

Query: 753  FMISGDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTR 574
            FMISGDS+SEHREWSMDQFN S DAKVFFGSIK CGEGISLVGASRI+ILDVHLNPSVTR
Sbjct: 843  FMISGDSSSEHREWSMDQFNKSTDAKVFFGSIKTCGEGISLVGASRIVILDVHLNPSVTR 902

Query: 573  QAIGRAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEE 394
            QAI  AFRPGQ +KVY YRL+AADSPEE DH+ SFRKEL+SKMWFEW E C  ++FE+E 
Sbjct: 903  QAISHAFRPGQKRKVYTYRLVAADSPEEEDHSMSFRKELMSKMWFEWDEYCDHQEFELET 962

Query: 393  IDINDSEDLFLESPLLGEDVKLLYKR 316
            +DI++S+D+FLESP L EDVKLLY+R
Sbjct: 963  VDISNSQDMFLESPNLREDVKLLYRR 988


>ref|XP_008794072.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Phoenix
            dactylifera]
          Length = 1115

 Score =  932 bits (2408), Expect = 0.0
 Identities = 480/706 (67%), Positives = 559/706 (79%), Gaps = 7/706 (0%)
 Frame = -3

Query: 2412 DANAELNPYVDLQD--DIMTLESRRKVE-IENDG--LTDMWKEMTLAMEFSKDAASDN-- 2254
            D N+ L     +Q+   +M +  R + E +END   L D+WKEM+LAME SK    D   
Sbjct: 425  DVNSMLGSSAAVQEHSSVMGICQREEAENLENDEHQLDDLWKEMSLAMECSKSPKYDEPA 484

Query: 2253 SVVEKGEIECDHSCFLKDDLGYVCRICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAG 2074
            +V E+ E EC HS  L+DDLG VCRICGVIQ+SI+TIF+YQW K  R+ RT +S +R+  
Sbjct: 485  AVQEEEEEECKHSPVLQDDLGIVCRICGVIQRSIDTIFEYQWAKAPRAARTLMSRSRNTN 544

Query: 2073 FDQAGMTRFSRHSDLEHELIAAEISVHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMA 1894
             D     ++S    LEH  IAA++S+HPRH+KQMKPHQLEGFNFL+RNLV DKPGGCI+A
Sbjct: 545  -DVDETLQYSGPKFLEH-FIAADVSIHPRHLKQMKPHQLEGFNFLVRNLVNDKPGGCILA 602

Query: 1893 HAPGSGKTFMIISFIQSFLAKYPHARPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAK 1714
            HAPGSGKTFM+ISF+QSFLAKYP ARPLVVLPKGIL  WKKEFQRWQVEDIPL DFYS+K
Sbjct: 603  HAPGSGKTFMLISFVQSFLAKYPFARPLVVLPKGILPIWKKEFQRWQVEDIPLYDFYSSK 662

Query: 1713 ADNRSQQLEVLEDWVEHRSILFLGYKQFANIVCGSTNDKMAAACQERLLTVPTLLILDEG 1534
            ADNRSQQLE+L  W E+ SILFLGYKQF NI+C +   K+A+AC+E LL VPTLLILDEG
Sbjct: 663  ADNRSQQLEILHSWQENNSILFLGYKQFTNIICDNDTSKIASACRESLLKVPTLLILDEG 722

Query: 1533 HTPRNENTDVLHSLAKVKTPRKVVLSGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXX 1354
            HTPRNENT VL SLAKV+T RKVVLSGTLFQNHVREVF ILNLVRPKFL+L+T       
Sbjct: 723  HTPRNENTYVLDSLAKVQTHRKVVLSGTLFQNHVREVFTILNLVRPKFLRLDTSRDAVNR 782

Query: 1353 XXXXVNITGGSRRQCRTGQDTTFFDLVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKG 1174
                VNI   S ++        F+DLVEETLQND++FKRK+ VIQDLREMT +VLHYYKG
Sbjct: 783  ILSRVNI---SCKRLSKSSKERFYDLVEETLQNDDNFKRKVRVIQDLREMTKDVLHYYKG 839

Query: 1173 DFLDELPGLVDFTVLLNLTPRQKELVKRLKHLEKFKRSSVGSAVYMHPNLKDISENAEGD 994
            DFLDELPG+VDFTVLL L+ RQK +V+ L+  EKFK+ SVGSAVY+HP+L DISE+  GD
Sbjct: 840  DFLDELPGVVDFTVLLKLSARQKTIVQTLEKFEKFKKCSVGSAVYIHPHLLDISESTAGD 899

Query: 993  KKKKNAVGDRGITFNDEKIDQLVEKMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLP 814
            +          +  NDEKID L++ ++VRDGVKTKFFLNIL LSES GEK+L FSQY+LP
Sbjct: 900  R----------VYCNDEKIDGLLDSVNVRDGVKTKFFLNILSLSESVGEKVLAFSQYILP 949

Query: 813  LKFLERVLINFKGWSPGKEIFMISGDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGIS 634
            LKFLER+L+  KGW  GKEIFMI+GDS+ E RE SM+QFNNSPDAKVF GSIKACGEGIS
Sbjct: 950  LKFLERLLVKMKGWHSGKEIFMITGDSSPEQRELSMEQFNNSPDAKVFLGSIKACGEGIS 1009

Query: 633  LVGASRILILDVHLNPSVTRQAIGRAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELI 454
            LVGASR++ILDVHLNPSVTRQAIGR FRPGQ KKVY YRL+AADSPEE DH TSFRKELI
Sbjct: 1010 LVGASRVVILDVHLNPSVTRQAIGRVFRPGQEKKVYTYRLVAADSPEEEDHKTSFRKELI 1069

Query: 453  SKMWFEWSELCGSRDFEMEEIDINDSEDLFLESPLLGEDVKLLYKR 316
            SKMWFEWSE C  RDFE++EIDI   +D+FLES +LGEDVK+LY+R
Sbjct: 1070 SKMWFEWSEYCDHRDFELDEIDIASCQDMFLESSILGEDVKVLYRR 1115


>ref|XP_007042095.1| SNF2 domain-containing protein / helicase domain-containing protein,
            putative isoform 3 [Theobroma cacao]
            gi|508706030|gb|EOX97926.1| SNF2 domain-containing
            protein / helicase domain-containing protein, putative
            isoform 3 [Theobroma cacao]
          Length = 894

 Score =  917 bits (2371), Expect = 0.0
 Identities = 478/780 (61%), Positives = 581/780 (74%), Gaps = 5/780 (0%)
 Frame = -3

Query: 2640 PFQKVVLSSVDGTAVNDIVPMIEFRPXXXXXXXXXSPNHKTYQRSKHKRT-KRLKVTDCT 2464
            P Q++VL    G  ++  +P+ E             PN    + S   R  K  KV+   
Sbjct: 166  PVQEIVLRKPSGILLSKEIPVGE-------------PNVSQVRESMGNRIYKEEKVSLTC 212

Query: 2463 EIIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTLESRRKVEIENDGLTDMWKEMTLAM 2284
            EI      + KD G           YV +++D+ T     + E  +DGL D+W+EM++A+
Sbjct: 213  EI-----GIKKDKGV----------YVGVEEDVDT-----QTEAADDGLGDIWQEMSMAL 252

Query: 2283 EFSKDAASDNSVVEK---GEIECDHSCFLKDDLGYVCRICGVIQKSIETIFDYQWIKGTR 2113
            EFSKD   D S  E+    E +CDHS  LKDDLGYVCRICGVI++ IETI D Q+ K  R
Sbjct: 253  EFSKDGFEDPSSSERMSEDEEDCDHSFVLKDDLGYVCRICGVIERGIETIIDIQYNKVKR 312

Query: 2112 STRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEISVHPRHMKQMKPHQLEGFNFLLR 1933
            ST TY  E R+A   ++  T     S  E +L   +IS HPRH+KQMKPHQLEGFNFLL 
Sbjct: 313  STHTYALEPRNAKNRESTETVGVNFS--EDDLTVTDISAHPRHLKQMKPHQLEGFNFLLS 370

Query: 1932 NLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHARPLVVLPKGILSTWKKEFQRWQ 1753
            NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA+PLVVLPKGIL+TWKKEF+ WQ
Sbjct: 371  NLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHAKPLVVLPKGILATWKKEFETWQ 430

Query: 1752 VEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGYKQFANIVCGSTNDKMAAACQER 1573
            VED+PLLDFY+ KAD R QQL+VL+ WVE +SILFLGYKQF+ I+C     + + +CQE 
Sbjct: 431  VEDMPLLDFYTVKADTRLQQLDVLKKWVECKSILFLGYKQFSTIICDGGFSQTSISCQEI 490

Query: 1572 LLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVLSGTLFQNHVREVFNILNLVRPK 1393
            LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVLSGTL+QNHV+EVFNILNLVRPK
Sbjct: 491  LLRAPSILILDEGHTPRNENTDVLQSLAKVQTARKVVLSGTLYQNHVKEVFNILNLVRPK 550

Query: 1392 FLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFDLVEETLQNDEDFKRKITVIQDL 1213
            FL+L+T           V+I+ G R+Q + G D  F+DLVE TLQ DE+F+RK++VI DL
Sbjct: 551  FLRLDTSKSVIKKIMSKVHIS-GVRKQLKAGADAAFYDLVEHTLQKDENFERKVSVIHDL 609

Query: 1212 REMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKELVKRLKHLE-KFKRSSVGSAVYM 1036
            REMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQK+ V++LK  + KFK SSVGSAVY+
Sbjct: 610  REMTSKVLHYYKGDFLDELPGLVDFTVVLGLSPRQKDEVQKLKRFQRKFKISSVGSAVYL 669

Query: 1035 HPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVEKMDVRDGVKTKFFLNILGLSES 856
            HP L   SEN+                  D+K+D L++K+DV++GVK KFFLN++ L ES
Sbjct: 670  HPKLNSFSENS---------------VMTDDKMDDLLDKLDVKEGVKAKFFLNMINLCES 714

Query: 855  AGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMISGDSNSEHREWSMDQFNNSPDAK 676
            AGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF ISG+S+S+HRE SM++FNNSPDAK
Sbjct: 715  AGEKLLVFSQYLIPLKFLERLCVKMKGWHPGIEIFSISGESSSDHRELSMERFNNSPDAK 774

Query: 675  VFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIGRAFRPGQLKKVYAYRLIAADSP 496
            VFFGSIKACGEGISLVGASR++ILDVHLNPSVTRQA+GRAFRPGQ KKVYAYRLIA +SP
Sbjct: 775  VFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAVGRAFRPGQKKKVYAYRLIAGESP 834

Query: 495  EETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDINDSEDLFLESPLLGEDVKLLYKR 316
            EE DH+T F+KELI+KMWFEW++ CG+RDFEME +D+N+  DLFLESPLL ED+K+LYKR
Sbjct: 835  EEEDHSTCFKKELIAKMWFEWNKYCGNRDFEMETVDVNECNDLFLESPLLREDIKILYKR 894


>ref|XP_007042093.1| SNF2 domain-containing protein / helicase domain-containing protein,
            putative isoform 1 [Theobroma cacao]
            gi|590685408|ref|XP_007042094.1| SNF2 domain-containing
            protein / helicase domain-containing protein, putative
            isoform 1 [Theobroma cacao]
            gi|590685417|ref|XP_007042096.1| SNF2 domain-containing
            protein / helicase domain-containing protein, putative
            isoform 1 [Theobroma cacao] gi|508706028|gb|EOX97924.1|
            SNF2 domain-containing protein / helicase
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508706029|gb|EOX97925.1| SNF2 domain-containing
            protein / helicase domain-containing protein, putative
            isoform 1 [Theobroma cacao] gi|508706031|gb|EOX97927.1|
            SNF2 domain-containing protein / helicase
            domain-containing protein, putative isoform 1 [Theobroma
            cacao]
          Length = 899

 Score =  917 bits (2371), Expect = 0.0
 Identities = 478/780 (61%), Positives = 581/780 (74%), Gaps = 5/780 (0%)
 Frame = -3

Query: 2640 PFQKVVLSSVDGTAVNDIVPMIEFRPXXXXXXXXXSPNHKTYQRSKHKRT-KRLKVTDCT 2464
            P Q++VL    G  ++  +P+ E             PN    + S   R  K  KV+   
Sbjct: 171  PVQEIVLRKPSGILLSKEIPVGE-------------PNVSQVRESMGNRIYKEEKVSLTC 217

Query: 2463 EIIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTLESRRKVEIENDGLTDMWKEMTLAM 2284
            EI      + KD G           YV +++D+ T     + E  +DGL D+W+EM++A+
Sbjct: 218  EI-----GIKKDKGV----------YVGVEEDVDT-----QTEAADDGLGDIWQEMSMAL 257

Query: 2283 EFSKDAASDNSVVEK---GEIECDHSCFLKDDLGYVCRICGVIQKSIETIFDYQWIKGTR 2113
            EFSKD   D S  E+    E +CDHS  LKDDLGYVCRICGVI++ IETI D Q+ K  R
Sbjct: 258  EFSKDGFEDPSSSERMSEDEEDCDHSFVLKDDLGYVCRICGVIERGIETIIDIQYNKVKR 317

Query: 2112 STRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEISVHPRHMKQMKPHQLEGFNFLLR 1933
            ST TY  E R+A   ++  T     S  E +L   +IS HPRH+KQMKPHQLEGFNFLL 
Sbjct: 318  STHTYALEPRNAKNRESTETVGVNFS--EDDLTVTDISAHPRHLKQMKPHQLEGFNFLLS 375

Query: 1932 NLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHARPLVVLPKGILSTWKKEFQRWQ 1753
            NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA+PLVVLPKGIL+TWKKEF+ WQ
Sbjct: 376  NLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHAKPLVVLPKGILATWKKEFETWQ 435

Query: 1752 VEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGYKQFANIVCGSTNDKMAAACQER 1573
            VED+PLLDFY+ KAD R QQL+VL+ WVE +SILFLGYKQF+ I+C     + + +CQE 
Sbjct: 436  VEDMPLLDFYTVKADTRLQQLDVLKKWVECKSILFLGYKQFSTIICDGGFSQTSISCQEI 495

Query: 1572 LLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVLSGTLFQNHVREVFNILNLVRPK 1393
            LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVLSGTL+QNHV+EVFNILNLVRPK
Sbjct: 496  LLRAPSILILDEGHTPRNENTDVLQSLAKVQTARKVVLSGTLYQNHVKEVFNILNLVRPK 555

Query: 1392 FLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFDLVEETLQNDEDFKRKITVIQDL 1213
            FL+L+T           V+I+ G R+Q + G D  F+DLVE TLQ DE+F+RK++VI DL
Sbjct: 556  FLRLDTSKSVIKKIMSKVHIS-GVRKQLKAGADAAFYDLVEHTLQKDENFERKVSVIHDL 614

Query: 1212 REMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKELVKRLKHLE-KFKRSSVGSAVYM 1036
            REMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQK+ V++LK  + KFK SSVGSAVY+
Sbjct: 615  REMTSKVLHYYKGDFLDELPGLVDFTVVLGLSPRQKDEVQKLKRFQRKFKISSVGSAVYL 674

Query: 1035 HPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVEKMDVRDGVKTKFFLNILGLSES 856
            HP L   SEN+                  D+K+D L++K+DV++GVK KFFLN++ L ES
Sbjct: 675  HPKLNSFSENS---------------VMTDDKMDDLLDKLDVKEGVKAKFFLNMINLCES 719

Query: 855  AGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMISGDSNSEHREWSMDQFNNSPDAK 676
            AGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF ISG+S+S+HRE SM++FNNSPDAK
Sbjct: 720  AGEKLLVFSQYLIPLKFLERLCVKMKGWHPGIEIFSISGESSSDHRELSMERFNNSPDAK 779

Query: 675  VFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIGRAFRPGQLKKVYAYRLIAADSP 496
            VFFGSIKACGEGISLVGASR++ILDVHLNPSVTRQA+GRAFRPGQ KKVYAYRLIA +SP
Sbjct: 780  VFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAVGRAFRPGQKKKVYAYRLIAGESP 839

Query: 495  EETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDINDSEDLFLESPLLGEDVKLLYKR 316
            EE DH+T F+KELI+KMWFEW++ CG+RDFEME +D+N+  DLFLESPLL ED+K+LYKR
Sbjct: 840  EEEDHSTCFKKELIAKMWFEWNKYCGNRDFEMETVDVNECNDLFLESPLLREDIKILYKR 899


>ref|XP_012463016.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X7
            [Gossypium raimondii] gi|763812280|gb|KJB79132.1|
            hypothetical protein B456_013G034700 [Gossypium
            raimondii]
          Length = 964

 Score =  912 bits (2358), Expect = 0.0
 Identities = 489/851 (57%), Positives = 599/851 (70%), Gaps = 5/851 (0%)
 Frame = -3

Query: 2853 ISVIVLDSDEDNDGDRIENKHASNSEAKALREFQTKSLN--SQKKQMRQGCDVPGNGSTC 2680
            + V+VLDSD++            N   + L  FQ   LN  S+K   ++  ++    S  
Sbjct: 157  LPVLVLDSDDE-----------VNKNPRPLHLFQEIVLNKPSEKLLSKEKTEIVSKPSEE 205

Query: 2679 GNITVDANWQFPSPFQKVVLSSVDGTAVNDIVPMIEFRPXXXXXXXXXSPNHKTYQRSKH 2500
                     +   P +K++      T V+   P  +  P          P+ K   + K 
Sbjct: 206  LLFKEKMEIESRKPSEKLLHKEKMET-VSRKKPYEKLLPKEKMETISRKPSEKLLPKEKM 264

Query: 2499 KRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTLESRRKVEIEND 2323
                + K TD  E + +  E   KD G           YV +++D+ TL      E  +D
Sbjct: 265  VGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL-----TENVDD 309

Query: 2322 GLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCRICGVIQKSIET 2146
            GL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCRICGVI++ IET
Sbjct: 310  GLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCRICGVIERGIET 369

Query: 2145 IFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEISVHPRHMKQMKP 1966
            I + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+ HPRHMKQMKP
Sbjct: 370  IIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIAAHPRHMKQMKP 425

Query: 1965 HQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHARPLVVLPKGIL 1786
            HQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA+PLVVLPKGIL
Sbjct: 426  HQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHAKPLVVLPKGIL 485

Query: 1785 STWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGYKQFANIVCGST 1606
            +TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGYKQF+ I+C S 
Sbjct: 486  ATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGYKQFSTIICDSG 545

Query: 1605 NDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVLSGTLFQNHVRE 1426
            N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVLSGTL+QNHV+E
Sbjct: 546  NGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVLSGTLYQNHVKE 605

Query: 1425 VFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFDLVEETLQNDED 1246
            VFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+DLVE TLQ DE+
Sbjct: 606  VFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYDLVEHTLQKDEN 664

Query: 1245 FKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKELVKRLKHLE-KF 1069
            F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + V++LK  + KF
Sbjct: 665  FERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDEVQKLKRYQRKF 724

Query: 1068 KRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVEKMDVRDGVKTK 889
            K SSVGSAVY+HP L   SE ++    K            D KID L++K+D+R+G K K
Sbjct: 725  KVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLDKLDIREGAKAK 773

Query: 888  FFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMISGDSNSEHREWS 709
            FFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+G+S+++HREWS
Sbjct: 774  FFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSITGESSTDHREWS 833

Query: 708  MDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIGRAFRPGQLKKV 529
            MD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIGRAFRPGQ KKV
Sbjct: 834  MDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKV 893

Query: 528  YAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDINDSEDLFLESPL 349
            Y YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N+  DLFLES L
Sbjct: 894  YVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVNECNDLFLESHL 953

Query: 348  LGEDVKLLYKR 316
            L ED++LLY+R
Sbjct: 954  LREDIRLLYRR 964


>ref|XP_012463020.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X11
            [Gossypium raimondii]
          Length = 929

 Score =  911 bits (2354), Expect = 0.0
 Identities = 468/742 (63%), Positives = 562/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P+ K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 219  PSEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 268

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 269  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 323

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 324  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 379

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 380  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 439

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 440  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 499

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 500  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 559

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 560  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 618

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 619  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 678

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 679  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 727

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 728  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 787

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 788  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 847

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 848  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 907

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 908  ECNDLFLESHLLREDIRLLYRR 929


>ref|XP_012463017.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X8
            [Gossypium raimondii]
          Length = 947

 Score =  911 bits (2354), Expect = 0.0
 Identities = 468/742 (63%), Positives = 562/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P+ K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 237  PSEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 286

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 287  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 341

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 342  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 397

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 398  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 457

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 458  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 517

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 518  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 577

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 578  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 636

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 637  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 696

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 697  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 745

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 746  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 805

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 806  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 865

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 866  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 925

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 926  ECNDLFLESHLLREDIRLLYRR 947


>ref|XP_012463014.1| PREDICTED: SNF2 domain-containing protein CLASSY 4-like isoform X5
            [Gossypium raimondii]
          Length = 966

 Score =  911 bits (2354), Expect = 0.0
 Identities = 468/742 (63%), Positives = 562/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P+ K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 256  PSEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 305

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 306  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 360

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 361  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 416

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 417  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 476

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 477  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 536

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 537  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 596

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 597  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 655

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 656  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 715

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 716  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 764

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 765  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 824

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 825  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 884

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 885  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 944

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 945  ECNDLFLESHLLREDIRLLYRR 966


>ref|XP_012463012.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X3
            [Gossypium raimondii]
          Length = 969

 Score =  911 bits (2354), Expect = 0.0
 Identities = 468/742 (63%), Positives = 562/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P+ K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 259  PSEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 308

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 309  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 363

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 364  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 419

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 420  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 479

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 480  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 539

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 540  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 599

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 600  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 658

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 659  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 718

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 719  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 767

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 768  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 827

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 828  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 887

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 888  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 947

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 948  ECNDLFLESHLLREDIRLLYRR 969


>ref|XP_012463008.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X1
            [Gossypium raimondii] gi|823260572|ref|XP_012463009.1|
            PREDICTED: SNF2 domain-containing protein CLASSY 3-like
            isoform X1 [Gossypium raimondii]
            gi|823260574|ref|XP_012463010.1| PREDICTED: SNF2
            domain-containing protein CLASSY 3-like isoform X1
            [Gossypium raimondii]
          Length = 985

 Score =  911 bits (2354), Expect = 0.0
 Identities = 468/742 (63%), Positives = 562/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P+ K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 275  PSEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 324

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 325  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 379

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 380  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 435

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 436  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 495

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 496  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 555

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 556  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 615

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 616  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 674

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 675  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 734

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 735  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 783

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 784  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 843

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 844  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 903

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 904  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 963

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 964  ECNDLFLESHLLREDIRLLYRR 985


>ref|XP_012463011.1| PREDICTED: SNF2 domain-containing protein CLASSY 4-like isoform X2
            [Gossypium raimondii] gi|763812281|gb|KJB79133.1|
            hypothetical protein B456_013G034700 [Gossypium
            raimondii] gi|763812282|gb|KJB79134.1| hypothetical
            protein B456_013G034700 [Gossypium raimondii]
          Length = 982

 Score =  911 bits (2354), Expect = 0.0
 Identities = 468/742 (63%), Positives = 562/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P+ K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 272  PSEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 321

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 322  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 376

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 377  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 432

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 433  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 492

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 493  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 552

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 553  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 612

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 613  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 671

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 672  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 731

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 732  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 780

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 781  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 840

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 841  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 900

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 901  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 960

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 961  ECNDLFLESHLLREDIRLLYRR 982


>gb|KJB79136.1| hypothetical protein B456_013G034700 [Gossypium raimondii]
          Length = 947

 Score =  910 bits (2353), Expect = 0.0
 Identities = 467/747 (62%), Positives = 567/747 (75%), Gaps = 8/747 (1%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTEIIVGKEQVNKDSGKEHDA--NAELNPYVDLQDDIMT 2359
            P+ K   + K +   R K +   +++  ++ V +   K+ D   N  L    DL+D+ + 
Sbjct: 219  PSEKLLHKEKMETVSRKKPSG--KLLYKEKMVGESKSKKTDLKENVSLTSETDLKDEGVY 276

Query: 2358 LESRRKVEI--EN--DGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDL 2194
            +     V+   EN  DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDL
Sbjct: 277  VGVEEDVDTLTENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDL 336

Query: 2193 GYVCRICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELI 2014
            GYVCRICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L 
Sbjct: 337  GYVCRICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLT 392

Query: 2013 AAEISVHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLA 1834
              +I+ HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLA
Sbjct: 393  VTDIAAHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLA 452

Query: 1833 KYPHARPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSI 1654
            KYPHA+PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SI
Sbjct: 453  KYPHAKPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSI 512

Query: 1653 LFLGYKQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTP 1474
            LFLGYKQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T 
Sbjct: 513  LFLGYKQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTT 572

Query: 1473 RKVVLSGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQD 1294
            RKVVLSGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +
Sbjct: 573  RKVVLSGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAE 631

Query: 1293 TTFFDLVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTP 1114
              F+DLVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+P
Sbjct: 632  AAFYDLVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSP 691

Query: 1113 RQKELVKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKI 937
            RQ + V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KI
Sbjct: 692  RQMDEVQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKI 740

Query: 936  DQLVEKMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKE 757
            D L++K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG E
Sbjct: 741  DDLLDKLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTE 800

Query: 756  IFMISGDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVT 577
            IF I+G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVT
Sbjct: 801  IFSITGESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVT 860

Query: 576  RQAIGRAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEME 397
            RQAIGRAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME
Sbjct: 861  RQAIGRAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDME 920

Query: 396  EIDINDSEDLFLESPLLGEDVKLLYKR 316
             +++N+  DLFLES LL ED++LLY+R
Sbjct: 921  TVNVNECNDLFLESHLLREDIRLLYRR 947


>ref|XP_012463018.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X9
            [Gossypium raimondii]
          Length = 947

 Score =  910 bits (2352), Expect = 0.0
 Identities = 469/750 (62%), Positives = 568/750 (75%), Gaps = 11/750 (1%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCT---EIIVGKEQVNKDSGKEH---DANAELNP---YVD 2380
            P+ K   + K +   R K  +     E +VG+ +  K   KE+    +  +L     YV 
Sbjct: 219  PSEKLLHKEKMETVSRKKPYEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGVYVG 278

Query: 2379 LQDDIMTLESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLK 2203
            +++D+ TL      E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LK
Sbjct: 279  VEEDVDTL-----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLK 333

Query: 2202 DDLGYVCRICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEH 2023
            DDLGYVCRICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D   
Sbjct: 334  DDLGYVCRICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED--- 389

Query: 2022 ELIAAEISVHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQS 1843
             L   +I+ HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QS
Sbjct: 390  HLTVTDIAAHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQS 449

Query: 1842 FLAKYPHARPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEH 1663
            FLAKYPHA+PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE 
Sbjct: 450  FLAKYPHAKPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVER 509

Query: 1662 RSILFLGYKQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKV 1483
            +SILFLGYKQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV
Sbjct: 510  KSILFLGYKQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKV 569

Query: 1482 KTPRKVVLSGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRT 1303
            +T RKVVLSGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + 
Sbjct: 570  QTTRKVVLSGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKG 628

Query: 1302 GQDTTFFDLVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLN 1123
            G +  F+DLVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L 
Sbjct: 629  GAEAAFYDLVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLG 688

Query: 1122 LTPRQKELVKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFND 946
            L+PRQ + V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D
Sbjct: 689  LSPRQMDEVQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------ID 737

Query: 945  EKIDQLVEKMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSP 766
             KID L++K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW P
Sbjct: 738  AKIDDLLDKLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQP 797

Query: 765  GKEIFMISGDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNP 586
            G EIF I+G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNP
Sbjct: 798  GTEIFSITGESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNP 857

Query: 585  SVTRQAIGRAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDF 406
            SVTRQAIGRAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF
Sbjct: 858  SVTRQAIGRAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDF 917

Query: 405  EMEEIDINDSEDLFLESPLLGEDVKLLYKR 316
            +ME +++N+  DLFLES LL ED++LLY+R
Sbjct: 918  DMETVNVNECNDLFLESHLLREDIRLLYRR 947


>ref|XP_012463019.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X10
            [Gossypium raimondii]
          Length = 930

 Score =  910 bits (2351), Expect = 0.0
 Identities = 468/742 (63%), Positives = 561/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P  K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 220  PYEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 269

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 270  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 324

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 325  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 380

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 381  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 440

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 441  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 500

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 501  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 560

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 561  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 619

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 620  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 679

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 680  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 728

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 729  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 788

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 789  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 848

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 849  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 908

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 909  ECNDLFLESHLLREDIRLLYRR 930


>ref|XP_012463013.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X4
            [Gossypium raimondii]
          Length = 968

 Score =  910 bits (2351), Expect = 0.0
 Identities = 468/742 (63%), Positives = 561/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P  K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 258  PYEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 307

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 308  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 362

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 363  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 418

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 419  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 478

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 479  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 538

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 539  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 598

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 599  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 657

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 658  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 717

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 718  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 766

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 767  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 826

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 827  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 886

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 887  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 946

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 947  ECNDLFLESHLLREDIRLLYRR 968


>ref|XP_012463015.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X6
            [Gossypium raimondii] gi|763812283|gb|KJB79135.1|
            hypothetical protein B456_013G034700 [Gossypium
            raimondii]
          Length = 965

 Score =  910 bits (2351), Expect = 0.0
 Identities = 468/742 (63%), Positives = 561/742 (75%), Gaps = 3/742 (0%)
 Frame = -3

Query: 2532 PNHKTYQRSKHKRTKRLKVTDCTE-IIVGKEQVNKDSGKEHDANAELNPYVDLQDDIMTL 2356
            P  K   + K     + K TD  E + +  E   KD G           YV +++D+ TL
Sbjct: 255  PYEKLLPKEKMVGESKSKKTDLKENVSLTSETDLKDEGV----------YVGVEEDVDTL 304

Query: 2355 ESRRKVEIENDGLTDMWKEMTLAMEFSKDAASDNSVVEKGEIE-CDHSCFLKDDLGYVCR 2179
                  E  +DGL D+W+EM++A+EFSKD   +       E E CDHS  LKDDLGYVCR
Sbjct: 305  -----TENVDDGLGDIWQEMSMALEFSKDGLEELPGENMSEDEDCDHSFVLKDDLGYVCR 359

Query: 2178 ICGVIQKSIETIFDYQWIKGTRSTRTYVSETRSAGFDQAGMTRFSRHSDLEHELIAAEIS 1999
            ICGVI++ IETI + Q+ K  +STRTY  E R+ G + +    F    D    L   +I+
Sbjct: 360  ICGVIERGIETIIEIQYNKVKKSTRTYAVEPRN-GIESSETVGFKLSED---HLTVTDIA 415

Query: 1998 VHPRHMKQMKPHQLEGFNFLLRNLVTDKPGGCIMAHAPGSGKTFMIISFIQSFLAKYPHA 1819
             HPRHMKQMKPHQLEGFNFLL NLVTD PGGCI+AHAPGSGKTFMIISF+QSFLAKYPHA
Sbjct: 416  AHPRHMKQMKPHQLEGFNFLLNNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHA 475

Query: 1818 RPLVVLPKGILSTWKKEFQRWQVEDIPLLDFYSAKADNRSQQLEVLEDWVEHRSILFLGY 1639
            +PLVVLPKGIL+TWKKEFQ WQVEDI LLDFY+ KADNRSQQL+VL+ WVE +SILFLGY
Sbjct: 476  KPLVVLPKGILATWKKEFQTWQVEDIQLLDFYTVKADNRSQQLDVLKQWVERKSILFLGY 535

Query: 1638 KQFANIVCGSTNDKMAAACQERLLTVPTLLILDEGHTPRNENTDVLHSLAKVKTPRKVVL 1459
            KQF+ I+C S N K +  CQE LL  P++LILDEGHTPRNENTDVL SLAKV+T RKVVL
Sbjct: 536  KQFSTIICDSGNGKTSITCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTTRKVVL 595

Query: 1458 SGTLFQNHVREVFNILNLVRPKFLKLETXXXXXXXXXXXVNITGGSRRQCRTGQDTTFFD 1279
            SGTL+QNHV+EVFNILNLVRPKFL+ +T           V+I+ G R+Q + G +  F+D
Sbjct: 596  SGTLYQNHVKEVFNILNLVRPKFLRSDTSKSIIKRVMSKVHIS-GVRKQFKGGAEAAFYD 654

Query: 1278 LVEETLQNDEDFKRKITVIQDLREMTNNVLHYYKGDFLDELPGLVDFTVLLNLTPRQKEL 1099
            LVE TLQ DE+F+RK++VI DLREMT+ VLHYYKGDFLDELPGLVDFTV+L L+PRQ + 
Sbjct: 655  LVEHTLQKDENFERKVSVIHDLREMTSRVLHYYKGDFLDELPGLVDFTVVLGLSPRQMDE 714

Query: 1098 VKRLKHLE-KFKRSSVGSAVYMHPNLKDISENAEGDKKKKNAVGDRGITFNDEKIDQLVE 922
            V++LK  + KFK SSVGSAVY+HP L   SE ++    K            D KID L++
Sbjct: 715  VQKLKRYQRKFKVSSVGSAVYLHPKLASFSEKSDTTDDK-----------IDAKIDDLLD 763

Query: 921  KMDVRDGVKTKFFLNILGLSESAGEKLLVFSQYLLPLKFLERVLINFKGWSPGKEIFMIS 742
            K+D+R+G K KFFLN+L L ESAGEKLLVFSQYL+PLKFLER+ +  KGW PG EIF I+
Sbjct: 764  KLDIREGAKAKFFLNLLNLCESAGEKLLVFSQYLIPLKFLERLAVKLKGWQPGTEIFSIT 823

Query: 741  GDSNSEHREWSMDQFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVTRQAIG 562
            G+S+++HREWSMD FNNSPDA+VFFGSIKACGEGISLVGASRI+ILDVHLNPSVTRQAIG
Sbjct: 824  GESSTDHREWSMDHFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIG 883

Query: 561  RAFRPGQLKKVYAYRLIAADSPEETDHNTSFRKELISKMWFEWSELCGSRDFEMEEIDIN 382
            RAFRPGQ KKVY YRLIA DSPEE DH+T F+KELI+KMWFEW++ CG+RDF+ME +++N
Sbjct: 884  RAFRPGQKKKVYVYRLIAGDSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNVN 943

Query: 381  DSEDLFLESPLLGEDVKLLYKR 316
            +  DLFLES LL ED++LLY+R
Sbjct: 944  ECNDLFLESHLLREDIRLLYRR 965