BLASTX nr result

ID: Cinnamomum25_contig00010478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00010478
         (527 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660225.1| PREDICTED: polyadenylate-binding protein-int...    72   1e-10
ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein-int...    72   1e-10
emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]    72   1e-10
ref|XP_010267390.1| PREDICTED: polyadenylate-binding protein-int...    68   3e-09
ref|XP_010267387.1| PREDICTED: polyadenylate-binding protein-int...    68   3e-09

>ref|XP_010660225.1| PREDICTED: polyadenylate-binding protein-interacting protein 11
           isoform X2 [Vitis vinifera] gi|297742454|emb|CBI34603.3|
           unnamed protein product [Vitis vinifera]
          Length = 397

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 56/146 (38%), Positives = 73/146 (50%), Gaps = 29/146 (19%)
 Frame = +3

Query: 177 MAVVDSAGADLPV------RNFEAAAPDSNGSGDADHQTAHLSRMMVVDPTLQQTAILRS 338
           MAVV++ G DL +      RNF+AAAP+ N SGD +    HL R  +VDP+L Q      
Sbjct: 1   MAVVENGGVDLGISVGSSNRNFDAAAPEQNVSGDQE----HLVRARMVDPSLHQNNNGNG 56

Query: 339 P--SSHDHYFQMKVQQ-QMQLPAPPAHVAGHQA-LSGGGHGID----------------- 455
           P    HD    MKVQQ Q +  APPAHV+ H+A ++   H +D                 
Sbjct: 57  PILRPHDQGLYMKVQQFQERGAAPPAHVSSHKAQVASVQHNLDRSQKIGVQNMQVGPVAA 116

Query: 456 --QRGGADLPRKGDDGFRRDMRDLEE 527
             +  G  L R GD G   DMR+L+E
Sbjct: 117 QHRSNGGHLQRNGDSGV--DMRELQE 140


>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein-interacting protein 11
           isoform X1 [Vitis vinifera]
           gi|731378917|ref|XP_010660218.1| PREDICTED:
           polyadenylate-binding protein-interacting protein 11
           isoform X1 [Vitis vinifera]
          Length = 398

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 56/146 (38%), Positives = 73/146 (50%), Gaps = 29/146 (19%)
 Frame = +3

Query: 177 MAVVDSAGADLPV------RNFEAAAPDSNGSGDADHQTAHLSRMMVVDPTLQQTAILRS 338
           MAVV++ G DL +      RNF+AAAP+ N SGD +    HL R  +VDP+L Q      
Sbjct: 1   MAVVENGGVDLGISVGSSNRNFDAAAPEQNVSGDQE----HLVRARMVDPSLHQNNNGNG 56

Query: 339 P--SSHDHYFQMKVQQ-QMQLPAPPAHVAGHQA-LSGGGHGID----------------- 455
           P    HD    MKVQQ Q +  APPAHV+ H+A ++   H +D                 
Sbjct: 57  PILRPHDQGLYMKVQQFQERGAAPPAHVSSHKAQVASVQHNLDRSQKIGVQNMQVGPVAA 116

Query: 456 --QRGGADLPRKGDDGFRRDMRDLEE 527
             +  G  L R GD G   DMR+L+E
Sbjct: 117 QHRSNGGHLQRNGDSGV--DMRELQE 140


>emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
          Length = 369

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 56/146 (38%), Positives = 73/146 (50%), Gaps = 29/146 (19%)
 Frame = +3

Query: 177 MAVVDSAGADLPV------RNFEAAAPDSNGSGDADHQTAHLSRMMVVDPTLQQTAILRS 338
           MAVV++ G DL +      RNF+AAAP+ N SGD +    HL R  +VDP+L Q      
Sbjct: 1   MAVVENGGVDLGISVGSSNRNFDAAAPEQNVSGDQE----HLVRARMVDPSLHQNNNGNG 56

Query: 339 P--SSHDHYFQMKVQQ-QMQLPAPPAHVAGHQA-LSGGGHGID----------------- 455
           P    HD    MKVQQ Q +  APPAHV+ H+A ++   H +D                 
Sbjct: 57  PILRPHDQGLYMKVQQFQERGAAPPAHVSSHKAQVASVQHNLDRSQKIGVQNMQVGPVAA 116

Query: 456 --QRGGADLPRKGDDGFRRDMRDLEE 527
             +  G  L R GD G   DMR+L+E
Sbjct: 117 QHRSNGGXLQRNGDSGV--DMRELQE 140


>ref|XP_010267390.1| PREDICTED: polyadenylate-binding protein-interacting protein
           12-like isoform X2 [Nelumbo nucifera]
          Length = 407

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 58/169 (34%), Positives = 77/169 (45%), Gaps = 52/169 (30%)
 Frame = +3

Query: 177 MAVVDSAGADLPV------RNFEAAAPDSNGSGDADHQTAHLSRMMVVDPTLQQ----TA 326
           MAVV++AG D+ +      RNFEAA PDS+ S D D    +     + DPTLQQ     +
Sbjct: 1   MAVVENAGVDMGINVGSSSRNFEAAVPDSHVSNDLDQPKQNHLVARMTDPTLQQDNNNNS 60

Query: 327 ILRSPSSHD-------HYFQMKVQQQMQLPAPPAHVAGH-------------------QA 428
           +LR    HD       H FQ + Q Q +  AP AHV+ H                   Q 
Sbjct: 61  VLR---PHDQPYHMKVHSFQQQQQSQHRGAAPVAHVSNHKPQLSQVRHNPDHVPKNAVQN 117

Query: 429 LSGGG----HGI----------DQRGGADLPRKG--DDGFRRDMRDLEE 527
           + GG     HG            +  G DL R G  D+G+++D+RDLEE
Sbjct: 118 VQGGATPPQHGAPGKSGFVQAHQRSNGVDLQRNGEVDEGYKQDIRDLEE 166


>ref|XP_010267387.1| PREDICTED: polyadenylate-binding protein-interacting protein
           12-like isoform X1 [Nelumbo nucifera]
           gi|720036545|ref|XP_010267388.1| PREDICTED:
           polyadenylate-binding protein-interacting protein
           12-like isoform X1 [Nelumbo nucifera]
           gi|720036549|ref|XP_010267389.1| PREDICTED:
           polyadenylate-binding protein-interacting protein
           12-like isoform X1 [Nelumbo nucifera]
          Length = 427

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 58/169 (34%), Positives = 77/169 (45%), Gaps = 52/169 (30%)
 Frame = +3

Query: 177 MAVVDSAGADLPV------RNFEAAAPDSNGSGDADHQTAHLSRMMVVDPTLQQ----TA 326
           MAVV++AG D+ +      RNFEAA PDS+ S D D    +     + DPTLQQ     +
Sbjct: 1   MAVVENAGVDMGINVGSSSRNFEAAVPDSHVSNDLDQPKQNHLVARMTDPTLQQDNNNNS 60

Query: 327 ILRSPSSHD-------HYFQMKVQQQMQLPAPPAHVAGH-------------------QA 428
           +LR    HD       H FQ + Q Q +  AP AHV+ H                   Q 
Sbjct: 61  VLR---PHDQPYHMKVHSFQQQQQSQHRGAAPVAHVSNHKPQLSQVRHNPDHVPKNAVQN 117

Query: 429 LSGGG----HGI----------DQRGGADLPRKG--DDGFRRDMRDLEE 527
           + GG     HG            +  G DL R G  D+G+++D+RDLEE
Sbjct: 118 VQGGATPPQHGAPGKSGFVQAHQRSNGVDLQRNGEVDEGYKQDIRDLEE 166


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