BLASTX nr result

ID: Cinnamomum25_contig00010263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00010263
         (451 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...    90   2e-29
emb|CBI23503.3| unnamed protein product [Vitis vinifera]              110   5e-22
ref|XP_007013544.1| Uncharacterized protein TCM_038148 [Theobrom...    97   4e-18
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...    97   5e-18
emb|CAA34729.1| unnamed protein product (mitochondrion) [Beta vu...    97   5e-18
gb|AHJ81036.1| orf105 (mitochondrion) [Panax ginseng]                  79   1e-12
gb|KJB09778.1| hypothetical protein B456_001G164600 [Gossypium r...    77   4e-12
ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm...    69   2e-11
ref|YP_588306.1| hypothetical protein ZeamMp044 [Zea mays subsp....    73   6e-11
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    70   7e-10
ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabac...    68   2e-09
gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativ...    57   6e-06

>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score = 90.1 bits (222), Expect(2) = 2e-29
 Identities = 44/47 (93%), Positives = 44/47 (93%)
 Frame = -1

Query: 301 QQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQVESGVTGTAV 161
           QQVRHLLQKRESTSDNH SARQRVEWPRADLFGYIIQVES VTG AV
Sbjct: 116 QQVRHLLQKRESTSDNHVSARQRVEWPRADLFGYIIQVESRVTGKAV 162



 Score = 65.5 bits (158), Expect(2) = 2e-29
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = -3

Query: 449 SPRSARWPIGIAAFGLCLPFLIKNSGSAR*SAGNNRKE 336
           SPRSA  PIGIAAFGLCLPF+IKNSGSAR SAGNNRKE
Sbjct: 63  SPRSAL-PIGIAAFGLCLPFIIKNSGSARESAGNNRKE 99


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  110 bits (274), Expect = 5e-22
 Identities = 54/63 (85%), Positives = 55/63 (87%), Gaps = 4/63 (6%)
 Frame = -2

Query: 411 LRALPALSN*KFRLGPVKRWQQQKGRGPCSCCARPL----SSRFGIYYKRENPLQITTPL 244
           LRALPAL N +FRLGP KRWQQQKGRGPCSCCARPL     SRFGIYYKRENPLQITTPL
Sbjct: 182 LRALPALYNKEFRLGPGKRWQQQKGRGPCSCCARPLLSQWGSRFGIYYKRENPLQITTPL 241

Query: 243 LGS 235
           LGS
Sbjct: 242 LGS 244


>ref|XP_007013544.1| Uncharacterized protein TCM_038148 [Theobroma cacao]
           gi|508783907|gb|EOY31163.1| Uncharacterized protein
           TCM_038148 [Theobroma cacao]
          Length = 538

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 49/73 (67%), Positives = 55/73 (75%)
 Frame = -1

Query: 379 IPARPGKALATTERKGSM*LLRPSTEQQVRHLLQKRESTSDNHASARQRVEWPRADLFGY 200
           + + P + L   E   +      S  +QVRHLL+KRESTSDNHASARQRVEWPRADLFGY
Sbjct: 466 VSSEPEELLVWVETTLAQDFYHNSEREQVRHLLEKRESTSDNHASARQRVEWPRADLFGY 525

Query: 199 IIQVESGVTGTAV 161
           IIQVESGVTGTAV
Sbjct: 526 IIQVESGVTGTAV 538


>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2 (mitochondrion) [Beta
           vulgaris] gi|12822|emb|CAA34728.1| NADH:ubiquinone
           reductase subunit 2 (mitochondrion) [Beta vulgaris
           subsp. vulgaris]
          Length = 515

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 71/152 (46%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
 Frame = -3

Query: 449 SPRSARWPIGIAAFGLCLPFLIKNSGSAR*SAGNNRKE----XXXXXXXXXXXXXXXXST 282
           SPRSARWPIGIAAFGLCL FLIKNSGSAR SAGNNRKE                    +T
Sbjct: 57  SPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATT 116

Query: 281 TKERIHFR*PRL-C*AACGMAESRPFWIYNPSREWSYGNSRLMENNXXXXXXXXXXXXXF 105
           TKERIHF+       AACGMA S  F           G + LMENN              
Sbjct: 117 TKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRALFSLRI 176

Query: 104 LVPFRVNSPAAN*QLVGPYLFHLSSPEENPPP 9
           L   RVNS A      GP +   SSP + P P
Sbjct: 177 LRSLRVNSLARIQNFWGPSI-PSSSPAKTPLP 207


>emb|CAA34729.1| unnamed protein product (mitochondrion) [Beta vulgaris subsp.
           vulgaris]
          Length = 464

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 71/152 (46%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
 Frame = -3

Query: 449 SPRSARWPIGIAAFGLCLPFLIKNSGSAR*SAGNNRKE----XXXXXXXXXXXXXXXXST 282
           SPRSARWPIGIAAFGLCL FLIKNSGSAR SAGNNRKE                    +T
Sbjct: 6   SPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATT 65

Query: 281 TKERIHFR*PRL-C*AACGMAESRPFWIYNPSREWSYGNSRLMENNXXXXXXXXXXXXXF 105
           TKERIHF+       AACGMA S  F           G + LMENN              
Sbjct: 66  TKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRALFSLRI 125

Query: 104 LVPFRVNSPAAN*QLVGPYLFHLSSPEENPPP 9
           L   RVNS A      GP +   SSP + P P
Sbjct: 126 LRSLRVNSLARIQNFWGPSI-PSSSPAKTPLP 156


>gb|AHJ81036.1| orf105 (mitochondrion) [Panax ginseng]
          Length = 108

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = +3

Query: 327 MDPFLSVVASALPGRAGIFN*KGQAKPEGCYPNRPAGGTRR 449
           MDPFLSVVASA PGRAGI   KGQAKPEGCYPNRPAGGTRR
Sbjct: 1   MDPFLSVVASAFPGRAGILYYKGQAKPEGCYPNRPAGGTRR 41


>gb|KJB09778.1| hypothetical protein B456_001G164600 [Gossypium raimondii]
          Length = 494

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = -3

Query: 449 SPRSARWPIGIAAFGLCLPFLIKNSGSAR*SAGNNRKE 336
           SPRSARWPIGIAAFGLCLPF+IKNSGSAR SAGNNRKE
Sbjct: 24  SPRSARWPIGIAAFGLCLPFIIKNSGSARESAGNNRKE 61


>ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis]
           gi|223525904|gb|EEF28320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 68.6 bits (166), Expect(2) = 2e-11
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -2

Query: 420 DSSLRALPALSN*KFRLGPVKRWQQQKGRGPCSCCARPLSSRFG 289
           DSSL+ALPALSN  FRL P +RWQQ KG+GPCSC  RPL S++G
Sbjct: 34  DSSLQALPALSNKNFRLDPRERWQQHKGKGPCSCYVRPLLSKWG 77



 Score = 26.6 bits (57), Expect(2) = 2e-11
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 449 SPRSARWPIG 420
           SPRSARWPIG
Sbjct: 24  SPRSARWPIG 33


>ref|YP_588306.1| hypothetical protein ZeamMp044 [Zea mays subsp. mays]
           gi|40795129|gb|AAR91173.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|102579662|gb|ABF70942.1|
           hypothetical protein (mitochondrion) [Zea mays subsp.
           mays]
          Length = 101

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -2

Query: 390 SN*KFRLGPVKRWQQQKGRGPCSCCARPLSSRFGIYY 280
           SN +FRLGP KRWQQ K RGPCSCCARPLSSRFGIYY
Sbjct: 57  SNKEFRLGPGKRWQQHKERGPCSCCARPLSSRFGIYY 93


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
          Length = 1094

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 51/124 (41%), Positives = 54/124 (43%)
 Frame = -2

Query: 372 LGPVKRWQQQKGRGPCSCCARPLSSRFGIYYKRENPLQITTPLLGSVWNGREQTFLDI*S 193
           LGP KRWQQQKGRGPCS                      + P L                
Sbjct: 434 LGPGKRWQQQKGRGPCSA---------------------SAPFL---------------- 456

Query: 192 KSRVELREQPSDGKQLSRSVQRALFSLRIPRSLSC*FPSGELTTCGALSIPSLEPRRKPP 13
                      DG   S +     FS RI RSLSC FPSGE  T  ALSIPSL+PR KPP
Sbjct: 457 ----------VDGAAGSST----FFSSRILRSLSCEFPSGEFNTFWALSIPSLKPRIKPP 502

Query: 12  SPPD 1
           SP D
Sbjct: 503 SPSD 506


>ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabacum]
           gi|56806589|dbj|BAD83490.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 105

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 35/41 (85%), Positives = 35/41 (85%)
 Frame = +3

Query: 327 MDPFLSVVASALPGRAGIFN*KGQAKPEGCYPNRPAGGTRR 449
           MDPFLSVVASA PGRAGIF  KGQAKPEG YPNR  GGTRR
Sbjct: 1   MDPFLSVVASAFPGRAGIFYYKGQAKPEGSYPNR-KGGTRR 40


>gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
           gi|374277705|gb|AEZ03810.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
          Length = 164

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 25/30 (83%)
 Frame = +2

Query: 305 SGRAQQLHGPLPFCCCQRFTGPSRNF*LER 394
           SGRAQQLHGPL  CCCQRF GPSRN  LER
Sbjct: 7   SGRAQQLHGPLSLCCCQRFPGPSRNSLLER 36


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