BLASTX nr result

ID: Cinnamomum25_contig00009469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00009469
         (358 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011468580.1| PREDICTED: uncharacterized protein LOC101306...    60   4e-07
ref|XP_010524744.1| PREDICTED: uncharacterized protein LOC104802...    59   1e-06
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    59   1e-06
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]        57   4e-06
ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein A...    57   6e-06
ref|XP_010521022.1| PREDICTED: uncharacterized protein LOC104800...    56   8e-06

>ref|XP_011468580.1| PREDICTED: uncharacterized protein LOC101306660 [Fragaria vesca
           subsp. vesca]
          Length = 323

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = -1

Query: 211 NKSRLFLGNCSIRKRAKICSILGLPESQAQLKYLGFPIVFGTPKRLHFLPLLDSINSRLS 32
           +KS ++LG  ++ +RA I S LG+P  +    YLG PI  G PKR++F  L D I + +S
Sbjct: 81  SKSHVYLGKSAVHRRALIYSWLGVPMGKFPFMYLGVPIFVGRPKRVYFQVLTDRIRNAMS 140

Query: 31  AWKAKTLS 8
            WK  +LS
Sbjct: 141 NWKGNSLS 148


>ref|XP_010524744.1| PREDICTED: uncharacterized protein LOC104802714 [Tarenaya
           hassleriana] gi|729458497|ref|XP_010524746.1| PREDICTED:
           uncharacterized protein LOC104802714 [Tarenaya
           hassleriana] gi|729458500|ref|XP_010524747.1| PREDICTED:
           uncharacterized protein LOC104802714 [Tarenaya
           hassleriana]
          Length = 712

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = -1

Query: 208 KSRLFLGNCSIRKRAKICSILGLPESQAQLKYLGFPIVFGTPKRL---HFLPLLDSINSR 38
           KS LFL      +  +ICS +GLP  Q  ++YLG P+   +PKRL    + PLLD I S+
Sbjct: 222 KSELFLSGVEHLEADRICSAIGLPRGQLPVRYLGVPL---SPKRLTREDYQPLLDKIKSK 278

Query: 37  LSAWKAKTLS 8
           L+AW +K LS
Sbjct: 279 LTAWSSKALS 288


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/68 (41%), Positives = 40/68 (58%)
 Frame = -1

Query: 211 NKSRLFLGNCSIRKRAKICSILGLPESQAQLKYLGFPIVFGTPKRLHFLPLLDSINSRLS 32
           NKS +F G+ S+ K  ++ +I+G         YLG PI  G PK +H  P++D I ++LS
Sbjct: 5   NKSTVFAGSISVSKLNQLINIIGFNHGTLPFTYLGVPIFKGKPKVIHLQPIVDKIIAKLS 64

Query: 31  AWKAKTLS 8
            WKA  LS
Sbjct: 65  TWKASLLS 72


>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
          Length = 1641

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/67 (40%), Positives = 39/67 (58%)
 Frame = -1

Query: 211  NKSRLFLGNCSIRKRAKICSILGLPESQAQLKYLGFPIVFGTPKRLHFLPLLDSINSRLS 32
            +KS ++ G+ S+     I +++G  +      YLG PI  G PKR+H  P+ D I S+LS
Sbjct: 1575 SKSTVYYGSISVAIIDHISNMIGFNKGSLPFNYLGVPIFKGKPKRIHLQPIADKIKSKLS 1634

Query: 31   AWKAKTL 11
            AWKA  L
Sbjct: 1635 AWKASPL 1641


>ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 768

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 28/67 (41%), Positives = 37/67 (55%)
 Frame = -1

Query: 208 KSRLFLGNCSIRKRAKICSILGLPESQAQLKYLGFPIVFGTPKRLHFLPLLDSINSRLSA 29
           KS  +LG+ S  ++A + S LG  E +    YLG PI  G PKR H   L D   ++L+ 
Sbjct: 148 KSTFYLGSTSRHRKAVVESCLGFKEGKTPFVYLGVPIFCGKPKRSHLQALADKAKAKLTG 207

Query: 28  WKAKTLS 8
           WK K LS
Sbjct: 208 WKGKLLS 214


>ref|XP_010521022.1| PREDICTED: uncharacterized protein LOC104800018 [Tarenaya
           hassleriana]
          Length = 312

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
 Frame = -1

Query: 211 NKSRLFLGNCSIRKRAKICSILGLPESQAQLKYLGFPIVFGTPKRLH---FLPLLDSINS 41
           +KS LFL      +  +ICS+ GL   +  ++YLG P+   +P+RL    +LPL++ I +
Sbjct: 18  SKSELFLSGMRASEADRICSVFGLTRGRLPVRYLGVPL---SPRRLSREDYLPLINKIKA 74

Query: 40  RLSAWKAKTLS 8
           +LSAW AK LS
Sbjct: 75  KLSAWSAKVLS 85


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