BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00009276
         (1261 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...   630   e-178
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s...   612   e-172
ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III s...   605   e-170
ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III s...   604   e-170
ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III s...   604   e-170
ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III s...   604   e-170
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   602   e-169
emb|CDM82865.1| unnamed protein product [Triticum aestivum]           596   e-167
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu...   590   e-166
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   587   e-165
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   587   e-165
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   583   e-164
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   583   e-164
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...   583   e-164
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s...   583   e-164
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...   582   e-163
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   582   e-163
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   579   e-162
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   578   e-162
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   575   e-161

>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
            nucifera]
          Length = 1392

 Score =  630 bits (1626), Expect = e-178
 Identities = 311/420 (74%), Positives = 362/420 (86%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYNAHAAASCMNR+AKLSARWIGNHGFSIGIDDVQPGE L +KK +TIE GY  CD LI
Sbjct: 673  RDYNAHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPGELLKDKKKETIEDGYKACDELI 732

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              YN+G L  +PGCDAAQTLEA+I+  LN+IREETA VC+  LHWRNSPLIMSQCGSKGS
Sbjct: 733  HSYNKGNLELEPGCDAAQTLEAQITRKLNEIREETAAVCMQELHWRNSPLIMSQCGSKGS 792

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAPNGFI+RSLPHFPR SKTPAAKGFVANSFY+GLTATEFF
Sbjct: 793  PINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFF 852

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGYMSRRL+K+LEDL+ YYDDTVR++S  VVQ +YGDDG+D
Sbjct: 853  FHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYDDTVRNASGGVVQFLYGDDGLD 912

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA MEGK G PLNL R++ K KATCP +G  A+LC S+I + +D+R+S+++MT +GGC  
Sbjct: 913  PANMEGKKGIPLNLERVYLKTKATCP-SGTNASLCPSEIVKILDDRISRYDMTPDGGCSS 971

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
            AF+K L+DF+   I+ L NTR+ALGLD++  +       +   +LE++AA ISGI+++QL
Sbjct: 972  AFKKLLVDFIQNRISILRNTRKALGLDEEYAKK------DNSDILEHIAANISGITTQQL 1025

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            +VFL++CISRYH KR+EAG AIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1026 KVFLETCISRYHLKRIEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1085


>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
            guineensis]
          Length = 1369

 Score =  612 bits (1577), Expect = e-172
 Identities = 309/420 (73%), Positives = 353/420 (84%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE+LN++K K I +GY  C G I
Sbjct: 650  RDYNPHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNQQKRKKINEGYRECHGHI 709

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              Y++G+L  QPGC+AAQTLE KI+G LN+IR    NVC+N LHWRNSPLIMSQCGSKGS
Sbjct: 710  SSYSKGELILQPGCNAAQTLELKITGVLNQIRATAGNVCMNELHWRNSPLIMSQCGSKGS 769

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM+ACVGQQSVGGRRAPNGFI+R+LPHFP +SKTPAAKGFVANSFY+GLT TEFF
Sbjct: 770  PINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTPTEFF 829

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS YYD TVR +S ++VQ +YGDDGMD
Sbjct: 830  FHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTASGSIVQFVYGDDGMD 889

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGK G PLNL +LF KI ATCP      TL  ++I   +D+RLSK++MT EGGC  
Sbjct: 890  PAKMEGKDGIPLNLDQLFMKIMATCPLR-EQDTLSPAEILHIMDDRLSKYDMTPEGGCSA 948

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
            +F+K L DFL + +  L N RRAL LD++ +Q     +Y+   VLE+VAA ISGIS++QL
Sbjct: 949  SFKKMLSDFLHKRVAALCNIRRALQLDENHLQK---QDYS---VLESVAANISGISAKQL 1002

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            QVFL++CISRYH K++EAG AIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1003 QVFLETCISRYHLKKIEAGGAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1062


>ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Phoenix
            dactylifera]
          Length = 1018

 Score =  605 bits (1559), Expect = e-170
 Identities = 304/420 (72%), Positives = 347/420 (82%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE+LN++K K I +GY  C  LI
Sbjct: 299  RDYNPHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNQQKRKKINEGYRECHELI 358

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              Y++G+L  Q GC+AAQTLE KI+G LN+IR    NVC+N LHWRNSPLIMSQCGSKGS
Sbjct: 359  SSYSKGQLTLQSGCNAAQTLELKITGVLNQIRSTAGNVCMNELHWRNSPLIMSQCGSKGS 418

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM+ACVGQQSVGGRRAPNGFI+R+LPHFP SSKTPAAKGFVANSFY+GLT TEFF
Sbjct: 419  PINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPISSKTPAAKGFVANSFYTGLTPTEFF 478

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS YYD TVR ++ ++VQ +YGDDGMD
Sbjct: 479  FHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTANGSIVQFVYGDDGMD 538

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGK G PLNL +LF K+ ATCP      TL  ++I   +D+RLSK++ T EGGC  
Sbjct: 539  PAKMEGKDGIPLNLDQLFMKVMATCPLR-EQDTLSPAEILHTLDDRLSKYDTTPEGGCSA 597

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
            AF+K L DFL +     +N RRAL LD++ +Q           VLE+VAA ISGIS++QL
Sbjct: 598  AFKKMLSDFLHKHAAAFSNIRRALQLDENHVQK------KDSSVLESVAANISGISAKQL 651

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            QVFL++CI RYH+K++EAG AIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 652  QVFLETCIFRYHSKKIEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 711


>ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Amborella trichopoda]
          Length = 1367

 Score =  604 bits (1558), Expect = e-170
 Identities = 303/420 (72%), Positives = 351/420 (83%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAKLSARWIGNHGFSIGIDDV PG  L ++K + I+ GY  CD  I
Sbjct: 660  RDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFI 719

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              Y++GKL  +PGC+AAQTLEA+I+  LN IR+  A VC+  LHWRNSPLIMSQCGSKGS
Sbjct: 720  DAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGS 779

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAPNGFI+RSLPHFPR+ KTPAAKGFVANSFY+GLTA EFF
Sbjct: 780  PINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAEFF 839

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGY+SRRL+KSLEDLST+YDDTVR+SS  ++Q  YGDDGMD
Sbjct: 840  FHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMD 899

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGKSG PLNL RLF KIKATCPA+   A+L  S+I   +++RLSKH+MT E GC  
Sbjct: 900  PAKMEGKSGVPLNLDRLFMKIKATCPAS-VSASLSPSEISTIVNDRLSKHDMTPERGCSM 958

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
            AF++ L +F+ + +  +  TR  LGLD+D +   K +       LE+VAA ISGIS +QL
Sbjct: 959  AFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSG------LEHVAANISGISRQQL 1012

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            +VFL++CISRYH KR+EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+TLGVPRIK
Sbjct: 1013 RVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIK 1072


>ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Musa
            acuminata subsp. malaccensis]
          Length = 1372

 Score =  604 bits (1558), Expect = e-170
 Identities = 302/420 (71%), Positives = 353/420 (84%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LN++K K I++GY  C  LI
Sbjct: 653  RDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNQQKKKKIDEGYRECHELI 712

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              Y +GKL  QPGC+AAQTLE KI+G LN+IR    NVC+N LHWRNSPLIMSQCGSKGS
Sbjct: 713  SLYGKGKLTLQPGCNAAQTLELKITGVLNQIRAIAGNVCMNELHWRNSPLIMSQCGSKGS 772

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM++CVGQQSVGGRRAPNGFI+R+LPHFP +SKTPAAKGFVANSFY+GLTATEFF
Sbjct: 773  PINISQMVSCVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 832

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS YYD+TVR++S  +VQ +YGDDGMD
Sbjct: 833  FHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDETVRNASGGIVQFLYGDDGMD 892

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGK G PLN+ +LF K+ ATCP    +  L  ++  + +D+RL+K++M+ EGGC  
Sbjct: 893  PAKMEGKDGIPLNMDQLFMKVMATCPPR-EHDMLSPTEALRIMDDRLAKYDMSPEGGCSA 951

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
            AF+K L DF+ + ++ L N R++L LD+  +            VLENVAAKISGISS+QL
Sbjct: 952  AFKKLLSDFVHKRVSALANMRKSLKLDETDMGR------KDSTVLENVAAKISGISSKQL 1005

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            +VFL++CISRYH+K++EAG AIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1006 EVFLETCISRYHSKKVEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1065


>ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Amborella trichopoda] gi|548832896|gb|ERM95665.1|
            hypothetical protein AMTR_s00023p00196820 [Amborella
            trichopoda]
          Length = 1383

 Score =  604 bits (1558), Expect = e-170
 Identities = 303/420 (72%), Positives = 351/420 (83%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAKLSARWIGNHGFSIGIDDV PG  L ++K + I+ GY  CD  I
Sbjct: 660  RDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFI 719

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              Y++GKL  +PGC+AAQTLEA+I+  LN IR+  A VC+  LHWRNSPLIMSQCGSKGS
Sbjct: 720  DAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGS 779

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAPNGFI+RSLPHFPR+ KTPAAKGFVANSFY+GLTA EFF
Sbjct: 780  PINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAEFF 839

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGY+SRRL+KSLEDLST+YDDTVR+SS  ++Q  YGDDGMD
Sbjct: 840  FHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMD 899

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGKSG PLNL RLF KIKATCPA+   A+L  S+I   +++RLSKH+MT E GC  
Sbjct: 900  PAKMEGKSGVPLNLDRLFMKIKATCPAS-VSASLSPSEISTIVNDRLSKHDMTPERGCSM 958

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
            AF++ L +F+ + +  +  TR  LGLD+D +   K +       LE+VAA ISGIS +QL
Sbjct: 959  AFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSG------LEHVAANISGISRQQL 1012

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            +VFL++CISRYH KR+EAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+TLGVPRIK
Sbjct: 1013 RVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIK 1072


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
            vinifera]
          Length = 1383

 Score =  602 bits (1553), Expect = e-169
 Identities = 309/420 (73%), Positives = 350/420 (83%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYNAHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG  LN++K K IE+GY  C  LI
Sbjct: 666  RDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELI 725

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              YN+GKL+ QPGC+AAQTLEA+I+G LNKIRE TANVC+  LHWRNSPLIMSQCGSKGS
Sbjct: 726  QQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGS 785

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAP+GFI+R+LPHFPR SKTP AKGFVA+SFY+GLTATEFF
Sbjct: 786  PINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFF 845

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDLS  YD+TVR+++ ++VQ +YGDDGMD
Sbjct: 846  FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMD 905

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGK G PLN  RLF K+KATCPA G  A+L    IE+ + +RL +HN + E GC D
Sbjct: 906  PARMEGKDGFPLNFNRLFLKVKATCPA-GENASLSALQIEETV-KRLKEHNTSAE-GCSD 962

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
            AF+ +L  FL E   K  NTR ALGL  + +      E NL  + E  A  ISGI+S+QL
Sbjct: 963  AFKTNLSGFLEECKEKFKNTREALGLHGEHV-----GEENL-DIQEKFAKNISGITSKQL 1016

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            QVFLD+CISRY  KR+EAGTAIGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1017 QVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1076


>emb|CDM82865.1| unnamed protein product [Triticum aestivum]
          Length = 1395

 Score =  596 bits (1536), Expect = e-167
 Identities = 297/420 (70%), Positives = 344/420 (81%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LNEKKGKTI +GY  C  LI
Sbjct: 669  RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNEKKGKTIGEGYQECHELI 728

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              Y++G L+PQPGC  AQTLEA+ISG LNK+R+   + C++ LHWRNSPLIMSQCGSKGS
Sbjct: 729  AQYSKGALKPQPGCSRAQTLEARISGVLNKLRDTAGDHCMSTLHWRNSPLIMSQCGSKGS 788

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM+ CVGQQSVGGRRAPNGFI+R+LPHFP +SKTPAAKGFVANSFY+GLTATEFF
Sbjct: 789  PINISQMVVCVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 848

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD TVR++S  +VQ +YGDDGMD
Sbjct: 849  FHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFVYGDDGMD 908

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            P +MEGK G PLNL +LF K+ ATCP  G + TL    I Q ++++LS+ + +  GGC D
Sbjct: 909  PVKMEGKGGNPLNLDQLFMKVMATCPQRG-HETLSPEGISQMLNDKLSEQDPS-AGGCSD 966

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
             F++ L  F+   I  L NTRRAL LD+D +            + E VAA ISGIS++QL
Sbjct: 967  RFKELLTKFVGNRIKMLRNTRRALHLDEDHVGR------KDSSIEECVAANISGISAKQL 1020

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            QVFLD+C+SRYH+K +EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1021 QVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1080


>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
          Length = 546

 Score =  590 bits (1521), Expect = e-166
 Identities = 297/394 (75%), Positives = 330/394 (83%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDY AHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LN  K   IEKGY  CD LI
Sbjct: 162  RDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKLEIEKGYKECDDLI 221

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              YN G L+  PGC+AAQTLE+ I+G LN IRE  A VC+ +LHWRNSPLIMSQCGSKGS
Sbjct: 222  NRYNTGGLKLLPGCNAAQTLESNITGKLNDIREAAAKVCMASLHWRNSPLIMSQCGSKGS 281

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM+ACVGQQSVGGRRAPNGFI+RSLPHFP +SKTP+AKGFVANSFY+GLTATEFF
Sbjct: 282  PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINSKTPSAKGFVANSFYTGLTATEFF 341

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYD+TVR+SS  +VQL+YGDDGMD
Sbjct: 342  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDETVRNSSGGIVQLLYGDDGMD 401

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA MEGK G PLNL RLF K KAT PAT A+ +L  S+I +A D+RLSKH+MT EGGC  
Sbjct: 402  PANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGGCSA 461

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
            AF++SL DFL + +  L  TRR LGLD+D ++         +HVLENVAA ISGI+S+QL
Sbjct: 462  AFKESLSDFLKKCVVALRKTRRELGLDEDKVR---------EHVLENVAANISGITSQQL 512

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPG 79
            QVFL++CI RYH KRLEAG AIGAIGAQSIGEPG
Sbjct: 513  QVFLETCIHRYHLKRLEAGAAIGAIGAQSIGEPG 546


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  587 bits (1514), Expect = e-165
 Identities = 294/420 (70%), Positives = 343/420 (81%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN++K   I+ GY  C  LI
Sbjct: 598  RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDLI 657

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              Y++G LR QPGC+AAQTLE  I+  LN+IREE   VC+N LHWRNSPLIMSQCGSKGS
Sbjct: 658  ASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGS 717

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM+ACVGQQSVGGRRAPNGFI+R+LPHFP +SKTPAAKGFVANSFY+GLTATEFF
Sbjct: 718  PINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 777

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD TVR++S  +VQ +YGDDGMD
Sbjct: 778  FHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMD 837

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGK G PLNL +LF K+ ATCP  G   TL   +I Q ++++LS+H+ + + GC +
Sbjct: 838  PAKMEGKDGKPLNLDQLFMKVMATCPQRG-QNTLSPGEILQILNDKLSEHDASSDDGCSE 896

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
             F++ L  FL + I  L +TRRAL LD+D +              E++AA ISGIS +QL
Sbjct: 897  KFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGE------RHSSFEESIAANISGISVKQL 950

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            QVFLD+C+SRYH K++EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 951  QVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1010


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  587 bits (1514), Expect = e-165
 Identities = 294/420 (70%), Positives = 343/420 (81%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN++K   I+ GY  C  LI
Sbjct: 660  RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDLI 719

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              Y++G LR QPGC+AAQTLE  I+  LN+IREE   VC+N LHWRNSPLIMSQCGSKGS
Sbjct: 720  ASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGS 779

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM+ACVGQQSVGGRRAPNGFI+R+LPHFP +SKTPAAKGFVANSFY+GLTATEFF
Sbjct: 780  PINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 839

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD TVR++S  +VQ +YGDDGMD
Sbjct: 840  FHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMD 899

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGK G PLNL +LF K+ ATCP  G   TL   +I Q ++++LS+H+ + + GC +
Sbjct: 900  PAKMEGKDGKPLNLDQLFMKVMATCPQRG-QNTLSPGEILQILNDKLSEHDASSDDGCSE 958

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
             F++ L  FL + I  L +TRRAL LD+D +              E++AA ISGIS +QL
Sbjct: 959  KFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGE------RHSSFEESIAANISGISVKQL 1012

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            QVFLD+C+SRYH K++EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1013 QVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1072


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  583 bits (1504), Expect = e-164
 Identities = 295/421 (70%), Positives = 345/421 (81%), Gaps = 1/421 (0%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV PGE+L ++K   I + Y  C+  I
Sbjct: 661  RDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCI 720

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              +NEGKL  QPGCDAAQTLEA+++ +LNK+R++   +C+ AL WRNSPLIMSQCGSKGS
Sbjct: 721  TQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGS 780

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAP+GFI+RSLPHFP  SK PAAKGFVA+SF+ GL+ATEFF
Sbjct: 781  PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFF 840

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDL+ YYD TVR++S+ +VQ +YGDDGMD
Sbjct: 841  FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            P+QME K G PLN +RLF K+KATCP  G   +L  S+I + ++ERLS H+MT EGGC +
Sbjct: 901  PSQMEEKKGRPLNFSRLFMKVKATCP-PGGEKSLSYSEICEIVNERLSYHDMTPEGGCSE 959

Query: 360  AFRKSLLDFLCE-LITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQ 184
            AFR SL DFL + L   L N R +L L ++        E + +  LE +A  ISGI+ RQ
Sbjct: 960  AFRSSLSDFLIKNLAETLKNLRESLLLGEEQY------EGDDRGYLEKIALNISGITKRQ 1013

Query: 183  LQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 4
            LQVFL++CISRYH KRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 1014 LQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1073

Query: 3    K 1
            K
Sbjct: 1074 K 1074


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  583 bits (1504), Expect = e-164
 Identities = 295/421 (70%), Positives = 345/421 (81%), Gaps = 1/421 (0%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV PGE+L ++K   I + Y  C+  I
Sbjct: 661  RDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCI 720

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              +NEGKL  QPGCDAAQTLEA+++ +LNK+R++   +C+ AL WRNSPLIMSQCGSKGS
Sbjct: 721  TQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGS 780

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAP+GFI+RSLPHFP  SK PAAKGFVA+SF+ GL+ATEFF
Sbjct: 781  PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFF 840

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDL+ YYD TVR++S+ +VQ +YGDDGMD
Sbjct: 841  FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            P+QME K G PLN +RLF K+KATCP  G   +L  S+I + ++ERLS H+MT EGGC +
Sbjct: 901  PSQMEEKKGRPLNFSRLFMKVKATCP-PGGEKSLSYSEICEIVNERLSYHDMTPEGGCSE 959

Query: 360  AFRKSLLDFLCE-LITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQ 184
            AFR SL DFL + L   L N R +L L ++        E + +  LE +A  ISGI+ RQ
Sbjct: 960  AFRSSLSDFLIKNLAETLKNLRESLLLGEEQY------EGDDRGYLEKIALNISGITKRQ 1013

Query: 183  LQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 4
            LQVFL++CISRYH KRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 1014 LQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1073

Query: 3    K 1
            K
Sbjct: 1074 K 1074


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Nicotiana tomentosiformis]
            gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1375

 Score =  583 bits (1503), Expect = e-164
 Identities = 293/421 (69%), Positives = 345/421 (81%), Gaps = 1/421 (0%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV PGE L ++K + I + Y  C+  I
Sbjct: 662  RDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVKQKLEEIHQNYKKCEDRI 721

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              +NEGKL  QPGCDAAQTLEA+++ +LNK+R++   +C+ ALHWRNSPLIMSQCGSKGS
Sbjct: 722  QQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALHWRNSPLIMSQCGSKGS 781

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAP+GFI+RSLPHFP  SK PAAKGFVA+SF+ GL+ATEFF
Sbjct: 782  PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEFF 841

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDL+ YYD+TVR++S++++Q +YGDDGMD
Sbjct: 842  FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYGDDGMD 901

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            P+QME K G PLN +RLF K+KATCP  G   +L  S+I + ++ERLS H+M+ EGGC +
Sbjct: 902  PSQMEEKKGRPLNFSRLFMKVKATCPPRGE-KSLSYSEICEIVNERLSYHDMSPEGGCSE 960

Query: 360  AFRKSLLDFLCE-LITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQ 184
            AFR SL DFL + L   L   R AL LD +            +  LEN+A  ISGI+ +Q
Sbjct: 961  AFRASLSDFLIKHLAETLKRLREALLLDGEQYAG------GDREYLENIALNISGITKKQ 1014

Query: 183  LQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 4
            LQVFL+ CISRYH KRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 1015 LQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1074

Query: 3    K 1
            K
Sbjct: 1075 K 1075


>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Nicotiana tomentosiformis]
            gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1390

 Score =  583 bits (1503), Expect = e-164
 Identities = 293/421 (69%), Positives = 345/421 (81%), Gaps = 1/421 (0%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV PGE L ++K + I + Y  C+  I
Sbjct: 662  RDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVKQKLEEIHQNYKKCEDRI 721

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              +NEGKL  QPGCDAAQTLEA+++ +LNK+R++   +C+ ALHWRNSPLIMSQCGSKGS
Sbjct: 722  QQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALHWRNSPLIMSQCGSKGS 781

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAP+GFI+RSLPHFP  SK PAAKGFVA+SF+ GL+ATEFF
Sbjct: 782  PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEFF 841

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDL+ YYD+TVR++S++++Q +YGDDGMD
Sbjct: 842  FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYGDDGMD 901

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            P+QME K G PLN +RLF K+KATCP  G   +L  S+I + ++ERLS H+M+ EGGC +
Sbjct: 902  PSQMEEKKGRPLNFSRLFMKVKATCPPRGE-KSLSYSEICEIVNERLSYHDMSPEGGCSE 960

Query: 360  AFRKSLLDFLCE-LITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQ 184
            AFR SL DFL + L   L   R AL LD +            +  LEN+A  ISGI+ +Q
Sbjct: 961  AFRASLSDFLIKHLAETLKRLREALLLDGEQYAG------GDREYLENIALNISGITKKQ 1014

Query: 183  LQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 4
            LQVFL+ CISRYH KRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 1015 LQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1074

Query: 3    K 1
            K
Sbjct: 1075 K 1075


>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
            DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris]
          Length = 1390

 Score =  582 bits (1501), Expect = e-163
 Identities = 293/421 (69%), Positives = 344/421 (81%), Gaps = 1/421 (0%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV PGE+L ++K + I + Y  C+  I
Sbjct: 662  RDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQEEIYQNYKKCEDRI 721

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              +NEGKL  QPGCDAAQTLEA+++  LNK+R++   +C+ ALHWRNSPLIMSQCGSKGS
Sbjct: 722  QQFNEGKLAVQPGCDAAQTLEAEVTMALNKVRDDIGKICMKALHWRNSPLIMSQCGSKGS 781

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAP+GFI+RSLPHFP  SK PAAKGFVA+SF+ GL+ATEFF
Sbjct: 782  PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEFF 841

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDL+ YYD+TVR++S++++Q +YGDDGMD
Sbjct: 842  FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASASIIQFMYGDDGMD 901

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            P+QME K G PLN +RLF K+KATCP  G    L  S+I + ++ERLS H+M+ EGGC +
Sbjct: 902  PSQMEEKKGRPLNFSRLFMKVKATCPPRGEKG-LSYSEICEIVNERLSYHDMSPEGGCSE 960

Query: 360  AFRKSLLDFLCE-LITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQ 184
            AFR SL DFL + L   L   R AL L ++            +  LENVA  ISGI+ +Q
Sbjct: 961  AFRASLSDFLIKNLAETLKRLREALLLGEEQYAG------GDREYLENVALNISGITKKQ 1014

Query: 183  LQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 4
            LQVFL+ CISRYH KRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 1015 LQVFLNMCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1074

Query: 3    K 1
            K
Sbjct: 1075 K 1075


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Setaria
            italica]
          Length = 1397

 Score =  582 bits (1501), Expect = e-163
 Identities = 292/420 (69%), Positives = 343/420 (81%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN +K K I++GY  C  LI
Sbjct: 673  RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKKIDEGYKQCHDLI 732

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              + +G L   PGC+AAQTLE KI+G LN+IR    NVC++ LHWRNSPLIMSQCGSKGS
Sbjct: 733  SLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWRNSPLIMSQCGSKGS 792

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM+ACVGQQSVGGRRAP+GFI+R+LPHFP +SKTPAAKGFVANSFY+GLTATEFF
Sbjct: 793  PINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 852

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD TVR++S  +VQ +YGDDGMD
Sbjct: 853  FHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMD 912

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGK GTPLNL +LF K+ ATCP  G   TL   DI+Q ++++L++H  + +GGC +
Sbjct: 913  PAKMEGKDGTPLNLDQLFMKVTATCPHRG-LDTLSPDDIKQMLEDKLTQHKTSSDGGCSE 971

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
             F++ L  FL E I  L  TR+AL LD+  +        N   + E +AA ISGIS++QL
Sbjct: 972  EFKECLKKFLEERIQLLKCTRKALHLDEKHVGK------NDSCIEEIIAANISGISAKQL 1025

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            QVFLD+C SRY++K +EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1026 QVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1085


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
            lycopersicum]
          Length = 1390

 Score =  579 bits (1492), Expect = e-162
 Identities = 292/421 (69%), Positives = 344/421 (81%), Gaps = 1/421 (0%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV PGE+L ++K   I + Y  C+  I
Sbjct: 661  RDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCI 720

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              +NEGKL  QPGCDAAQTLEA+++ +LNK+R++   +C+ AL WRNSPLIMSQCGSKGS
Sbjct: 721  TQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGS 780

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQMIACVGQQSVGGRRAP+GFI+RSLPHFP  SK PAAKGFVA+SF+ GL+ATEFF
Sbjct: 781  PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFF 840

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDL+ YYD TVR++S+ +VQ +YGDDGMD
Sbjct: 841  FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            P++ME K G PLN +RLF K+KATCP  G   +L  S+I + ++ERLS H+MT EGGC +
Sbjct: 901  PSRMEEKKGRPLNFSRLFMKVKATCP-PGGEKSLSYSEICEIVNERLSYHDMTPEGGCSE 959

Query: 360  AFRKSLLDFLCE-LITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQ 184
            AFR SL DFL + L   L N R +L L ++        E + +  LE +   ISGI+ +Q
Sbjct: 960  AFRASLSDFLIKSLAETLKNLRESLLLGEEQY------EGDDRGYLEKIVLNISGITKKQ 1013

Query: 183  LQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 4
            LQVFL++CISRYH KRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 1014 LQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1073

Query: 3    K 1
            K
Sbjct: 1074 K 1074


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  578 bits (1490), Expect = e-162
 Identities = 290/420 (69%), Positives = 343/420 (81%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN +K K I+ GY  C  LI
Sbjct: 667  RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDGGYKKCHDLI 726

Query: 1080 LDYNEGKLRPQPGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSKGS 901
              + +G L   PGC+AAQTLE  I+G LN+IR    NVC++ LHWRNSPLIMSQCGSKGS
Sbjct: 727  SLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIMSQCGSKGS 786

Query: 900  PINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATEFF 721
            PINISQM+ACVGQQSVGGRRAP+GF+ R+LPHFP +SKTPAAKGFVANSFY+GLTATEFF
Sbjct: 787  PINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANSFYTGLTATEFF 846

Query: 720  FHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDGMD 541
            FHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD TVR++S  +VQ +YGDDGMD
Sbjct: 847  FHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMD 906

Query: 540  PAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGCLD 361
            PA+MEGK G PLNL +LF K+ ATCP  G+  TL    I+Q ++++L +H+ + +GGC +
Sbjct: 907  PAKMEGKDGMPLNLDQLFMKVMATCPQRGS-DTLSPEAIKQMLEDKLLQHDTSSDGGCSE 965

Query: 360  AFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSRQL 181
             F+K+L +FL + I  +  TRRAL L +D +      E     V E+VAA ISGIS++QL
Sbjct: 966  EFKKNLTEFLDKRIELMKCTRRALHLHEDHV------EKKDSCVEESVAAIISGISAKQL 1019

Query: 180  QVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1
            QVFLD+C+SRY +K++EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
Sbjct: 1020 QVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1079


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1392

 Score =  575 bits (1482), Expect = e-161
 Identities = 288/422 (68%), Positives = 345/422 (81%), Gaps = 2/422 (0%)
 Frame = -2

Query: 1260 RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEDLNEKKGKTIEKGYWVCDGLI 1081
            RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+KK KTI++GY  C  LI
Sbjct: 665  RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNQKKKKTIDQGYTECHDLI 724

Query: 1080 LDYNEGKLRPQ--PGCDAAQTLEAKISGTLNKIREETANVCLNALHWRNSPLIMSQCGSK 907
              Y++G    +  PGC+ AQTLE ++S  LN++RE+    C+N LHWRNSPLIMSQCGSK
Sbjct: 725  AVYSKGAPGAELHPGCNRAQTLEVRVSAILNQLREKAGEHCMNTLHWRNSPLIMSQCGSK 784

Query: 906  GSPINISQMIACVGQQSVGGRRAPNGFIERSLPHFPRSSKTPAAKGFVANSFYSGLTATE 727
            GSPINISQM+ CVGQQSVGGRRAP+GFI+R+LPHFP  SKTPAAKGFVANSFY+GLTATE
Sbjct: 785  GSPINISQMVVCVGQQSVGGRRAPDGFIDRTLPHFPIHSKTPAAKGFVANSFYTGLTATE 844

Query: 726  FFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTYYDDTVRDSSSNVVQLIYGDDG 547
            FFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS +YD TVR++SS +VQ +YGDDG
Sbjct: 845  FFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASSGIVQFVYGDDG 904

Query: 546  MDPAQMEGKSGTPLNLARLFSKIKATCPATGAYATLCQSDIEQAIDERLSKHNMTLEGGC 367
            MDP +MEGK G+PLNL +LF K+KATCP  G +  L    I Q ++++LS+ +M+  GGC
Sbjct: 905  MDPVKMEGKGGSPLNLDQLFMKVKATCPQRG-HDMLSPEAIMQMLNDKLSEQDMS-SGGC 962

Query: 366  LDAFRKSLLDFLCELITKLNNTRRALGLDDDSIQTIKLNEYNLKHVLENVAAKISGISSR 187
             D F++ L  F  + I  L +TRR L LD+D    + + + +++   E +AA ISGIS++
Sbjct: 963  SDKFKELLTKFFEDRIKMLRSTRRTLHLDEDH---VGMKDSSIE---ERIAANISGISAK 1016

Query: 186  QLQVFLDSCISRYHAKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 7
            QLQVFLD+C+SRYH+K +EAG +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPR
Sbjct: 1017 QLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 1076

Query: 6    IK 1
            IK
Sbjct: 1077 IK 1078