BLASTX nr result
ID: Cinnamomum25_contig00008879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00008879
(1165 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009385774.1| PREDICTED: probable RNA-dependent RNA polyme... 487 e-135
ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polyme... 487 e-135
ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polyme... 487 e-135
ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polyme... 487 e-135
ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polyme... 463 e-128
ref|XP_008791530.1| PREDICTED: probable RNA-dependent RNA polyme... 463 e-128
ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polyme... 463 e-128
ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme... 461 e-127
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme... 461 e-127
ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polyme... 447 e-123
ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polyme... 431 e-118
ref|XP_011626804.1| PREDICTED: probable RNA-dependent RNA polyme... 428 e-117
gb|ERN15132.1| hypothetical protein AMTR_s00056p00110240 [Ambore... 428 e-117
ref|XP_009352548.1| PREDICTED: probable RNA-dependent RNA polyme... 423 e-115
ref|XP_010095361.1| putative RNA-dependent RNA polymerase 3 [Mor... 422 e-115
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 422 e-115
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 422 e-115
ref|XP_010049630.1| PREDICTED: probable RNA-dependent RNA polyme... 421 e-115
ref|XP_010049629.1| PREDICTED: probable RNA-dependent RNA polyme... 421 e-115
ref|XP_010049628.1| PREDICTED: probable RNA-dependent RNA polyme... 421 e-115
>ref|XP_009385774.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4 [Musa
acuminata subsp. malaccensis]
Length = 802
Score = 487 bits (1253), Expect = e-135
Identities = 245/392 (62%), Positives = 291/392 (74%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+EPYL+ LS+LMR E+KSLK GKLP+ +CYYLMGT DPTG LK NEVCVIL+NGQ+SG+
Sbjct: 389 DEPYLQFRLSILMREERKSLKTGKLPVMDCYYLMGTVDPTGLLKPNEVCVILENGQVSGD 448
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+YKHPGLHFGD+H +TATY DLE FVG +KYAIFFPTKGPRSLADEMANSDFDGDMY
Sbjct: 449 VLVYKHPGLHFGDVHVLTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMY 508
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRN QLL+YF S PW + S ++R Q+KP E S ELE LFQQFL+NRF+ S+
Sbjct: 509 WVSRNSQLLQYFRSSMPWTPTPS-NMRGIQQKKPIEFSSKELERELFQQFLINRFKPSNT 567
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
+ A+D WL++MDRLLTLGDEC EK+ L+ K+LQLVNIYY ALDAPKSG+KVE+P +LK
Sbjct: 568 VSMASDCWLSYMDRLLTLGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELK 627
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEH 265
AEK+PH++ER NSY S SILGLI+D V S+LPCF+EE +CL W
Sbjct: 628 AEKYPHYMERSNSYTSMSILGLIFDKVSSVQTEDPPSNGISKLPCFTEEPSQSCLLLWSQ 687
Query: 264 HYEEYRAEMCNAMSIGDE---SKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
Y Y EM M + E SKN + +LYGAAEF+ES RKLE+I+DEALA
Sbjct: 688 RYSNYLKEMKQVMEMKHETKDSKNEMADEIIQKYKLLLYGAAEFDESPRKLEDIWDEALA 747
Query: 93 IYQICYSYAE-TNGIGKCGFAWKVAGRALCSL 1
IY Y YAE +G+C FAWKVAGRALC L
Sbjct: 748 IYNNAYDYAERCQAVGRCSFAWKVAGRALCML 779
>ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Musa
acuminata subsp. malaccensis]
Length = 947
Score = 487 bits (1253), Expect = e-135
Identities = 245/392 (62%), Positives = 291/392 (74%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+EPYL+ LS+LMR E+KSLK GKLP+ +CYYLMGT DPTG LK NEVCVIL+NGQ+SG+
Sbjct: 534 DEPYLQFRLSILMREERKSLKTGKLPVMDCYYLMGTVDPTGLLKPNEVCVILENGQVSGD 593
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+YKHPGLHFGD+H +TATY DLE FVG +KYAIFFPTKGPRSLADEMANSDFDGDMY
Sbjct: 594 VLVYKHPGLHFGDVHVLTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMY 653
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRN QLL+YF S PW + S ++R Q+KP E S ELE LFQQFL+NRF+ S+
Sbjct: 654 WVSRNSQLLQYFRSSMPWTPTPS-NMRGIQQKKPIEFSSKELERELFQQFLINRFKPSNT 712
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
+ A+D WL++MDRLLTLGDEC EK+ L+ K+LQLVNIYY ALDAPKSG+KVE+P +LK
Sbjct: 713 VSMASDCWLSYMDRLLTLGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELK 772
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEH 265
AEK+PH++ER NSY S SILGLI+D V S+LPCF+EE +CL W
Sbjct: 773 AEKYPHYMERSNSYTSMSILGLIFDKVSSVQTEDPPSNGISKLPCFTEEPSQSCLLLWSQ 832
Query: 264 HYEEYRAEMCNAMSIGDE---SKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
Y Y EM M + E SKN + +LYGAAEF+ES RKLE+I+DEALA
Sbjct: 833 RYSNYLKEMKQVMEMKHETKDSKNEMADEIIQKYKLLLYGAAEFDESPRKLEDIWDEALA 892
Query: 93 IYQICYSYAE-TNGIGKCGFAWKVAGRALCSL 1
IY Y YAE +G+C FAWKVAGRALC L
Sbjct: 893 IYNNAYDYAERCQAVGRCSFAWKVAGRALCML 924
>ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 995
Score = 487 bits (1253), Expect = e-135
Identities = 245/392 (62%), Positives = 291/392 (74%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+EPYL+ LS+LMR E+KSLK GKLP+ +CYYLMGT DPTG LK NEVCVIL+NGQ+SG+
Sbjct: 582 DEPYLQFRLSILMREERKSLKTGKLPVMDCYYLMGTVDPTGLLKPNEVCVILENGQVSGD 641
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+YKHPGLHFGD+H +TATY DLE FVG +KYAIFFPTKGPRSLADEMANSDFDGDMY
Sbjct: 642 VLVYKHPGLHFGDVHVLTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMY 701
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRN QLL+YF S PW + S ++R Q+KP E S ELE LFQQFL+NRF+ S+
Sbjct: 702 WVSRNSQLLQYFRSSMPWTPTPS-NMRGIQQKKPIEFSSKELERELFQQFLINRFKPSNT 760
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
+ A+D WL++MDRLLTLGDEC EK+ L+ K+LQLVNIYY ALDAPKSG+KVE+P +LK
Sbjct: 761 VSMASDCWLSYMDRLLTLGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELK 820
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEH 265
AEK+PH++ER NSY S SILGLI+D V S+LPCF+EE +CL W
Sbjct: 821 AEKYPHYMERSNSYTSMSILGLIFDKVSSVQTEDPPSNGISKLPCFTEEPSQSCLLLWSQ 880
Query: 264 HYEEYRAEMCNAMSIGDE---SKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
Y Y EM M + E SKN + +LYGAAEF+ES RKLE+I+DEALA
Sbjct: 881 RYSNYLKEMKQVMEMKHETKDSKNEMADEIIQKYKLLLYGAAEFDESPRKLEDIWDEALA 940
Query: 93 IYQICYSYAE-TNGIGKCGFAWKVAGRALCSL 1
IY Y YAE +G+C FAWKVAGRALC L
Sbjct: 941 IYNNAYDYAERCQAVGRCSFAWKVAGRALCML 972
>ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 996
Score = 487 bits (1253), Expect = e-135
Identities = 245/392 (62%), Positives = 291/392 (74%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+EPYL+ LS+LMR E+KSLK GKLP+ +CYYLMGT DPTG LK NEVCVIL+NGQ+SG+
Sbjct: 583 DEPYLQFRLSILMREERKSLKTGKLPVMDCYYLMGTVDPTGLLKPNEVCVILENGQVSGD 642
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+YKHPGLHFGD+H +TATY DLE FVG +KYAIFFPTKGPRSLADEMANSDFDGDMY
Sbjct: 643 VLVYKHPGLHFGDVHVLTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMY 702
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRN QLL+YF S PW + S ++R Q+KP E S ELE LFQQFL+NRF+ S+
Sbjct: 703 WVSRNSQLLQYFRSSMPWTPTPS-NMRGIQQKKPIEFSSKELERELFQQFLINRFKPSNT 761
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
+ A+D WL++MDRLLTLGDEC EK+ L+ K+LQLVNIYY ALDAPKSG+KVE+P +LK
Sbjct: 762 VSMASDCWLSYMDRLLTLGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELK 821
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEH 265
AEK+PH++ER NSY S SILGLI+D V S+LPCF+EE +CL W
Sbjct: 822 AEKYPHYMERSNSYTSMSILGLIFDKVSSVQTEDPPSNGISKLPCFTEEPSQSCLLLWSQ 881
Query: 264 HYEEYRAEMCNAMSIGDE---SKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
Y Y EM M + E SKN + +LYGAAEF+ES RKLE+I+DEALA
Sbjct: 882 RYSNYLKEMKQVMEMKHETKDSKNEMADEIIQKYKLLLYGAAEFDESPRKLEDIWDEALA 941
Query: 93 IYQICYSYAE-TNGIGKCGFAWKVAGRALCSL 1
IY Y YAE +G+C FAWKVAGRALC L
Sbjct: 942 IYNNAYDYAERCQAVGRCSFAWKVAGRALCML 973
>ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
[Phoenix dactylifera]
Length = 957
Score = 463 bits (1192), Expect = e-128
Identities = 232/396 (58%), Positives = 289/396 (72%), Gaps = 9/396 (2%)
Frame = -2
Query: 1161 EPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGNV 982
EPYL+S L VL R E K+LK GKLP+SECYYLMG+ DPTGTLK NEVC+IL+NG +SG+V
Sbjct: 541 EPYLQSRLLVLRREEMKALKEGKLPVSECYYLMGSVDPTGTLKPNEVCIILENGHVSGDV 600
Query: 981 LLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYW 802
L+Y+ PGLHFGD+H +TATY+ DL+ VGN+KYAI F TKGPRSLADEMA DFDGDMYW
Sbjct: 601 LVYRQPGLHFGDMHILTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMYW 660
Query: 801 VSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSVI 622
VSRNPQLLKYF S+PW R++ K Q KP + S ELE LF+QFL+NRF+ S I
Sbjct: 661 VSRNPQLLKYFKASKPWVRTAPRI--KVTQLKPTQFSNTELERELFEQFLINRFKPSYTI 718
Query: 621 GTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLKA 442
GTA+D WL +MDRLLTLGDEC +KQ L KML+LV+IYY ALDA KSG+K+E+P++LK
Sbjct: 719 GTASDCWLMYMDRLLTLGDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKP 778
Query: 441 EKFPHFLERQ-----NSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLK 277
++FP+F+E++ Y SKSI GLIY+ V +LPCF+ E+P +CLK
Sbjct: 779 DQFPNFMEKKYLDKDKEYESKSIFGLIYEKVKLSQTKDLSSNEIWQLPCFNLEIPPSCLK 838
Query: 276 KWEHHYEEYRAEMCNAMSI---GDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFD 106
W+ HY EY AEM MS+ ESK+ + +LYGA+EFEES R+L++IF+
Sbjct: 839 SWKEHYTEYLAEMSQVMSMEHESKESKDWMANKVIQKYKLMLYGASEFEESNRELDDIFN 898
Query: 105 EALAIYQICYSYAETNGI-GKCGFAWKVAGRALCSL 1
EALAIY + Y YA++ I G+C FAW VAGRALC L
Sbjct: 899 EALAIYHVTYEYAKSVRIAGRCCFAWNVAGRALCML 934
>ref|XP_008791530.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Phoenix dactylifera]
Length = 981
Score = 463 bits (1192), Expect = e-128
Identities = 232/396 (58%), Positives = 289/396 (72%), Gaps = 9/396 (2%)
Frame = -2
Query: 1161 EPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGNV 982
EPYL+S L VL R E K+LK GKLP+SECYYLMG+ DPTGTLK NEVC+IL+NG +SG+V
Sbjct: 565 EPYLQSRLLVLRREEMKALKEGKLPVSECYYLMGSVDPTGTLKPNEVCIILENGHVSGDV 624
Query: 981 LLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYW 802
L+Y+ PGLHFGD+H +TATY+ DL+ VGN+KYAI F TKGPRSLADEMA DFDGDMYW
Sbjct: 625 LVYRQPGLHFGDMHILTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMYW 684
Query: 801 VSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSVI 622
VSRNPQLLKYF S+PW R++ K Q KP + S ELE LF+QFL+NRF+ S I
Sbjct: 685 VSRNPQLLKYFKASKPWVRTAPRI--KVTQLKPTQFSNTELERELFEQFLINRFKPSYTI 742
Query: 621 GTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLKA 442
GTA+D WL +MDRLLTLGDEC +KQ L KML+LV+IYY ALDA KSG+K+E+P++LK
Sbjct: 743 GTASDCWLMYMDRLLTLGDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKP 802
Query: 441 EKFPHFLERQ-----NSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLK 277
++FP+F+E++ Y SKSI GLIY+ V +LPCF+ E+P +CLK
Sbjct: 803 DQFPNFMEKKYLDKDKEYESKSIFGLIYEKVKLSQTKDLSSNEIWQLPCFNLEIPPSCLK 862
Query: 276 KWEHHYEEYRAEMCNAMSI---GDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFD 106
W+ HY EY AEM MS+ ESK+ + +LYGA+EFEES R+L++IF+
Sbjct: 863 SWKEHYTEYLAEMSQVMSMEHESKESKDWMANKVIQKYKLMLYGASEFEESNRELDDIFN 922
Query: 105 EALAIYQICYSYAETNGI-GKCGFAWKVAGRALCSL 1
EALAIY + Y YA++ I G+C FAW VAGRALC L
Sbjct: 923 EALAIYHVTYEYAKSVRIAGRCCFAWNVAGRALCML 958
>ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Phoenix dactylifera]
Length = 1006
Score = 463 bits (1192), Expect = e-128
Identities = 232/396 (58%), Positives = 289/396 (72%), Gaps = 9/396 (2%)
Frame = -2
Query: 1161 EPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGNV 982
EPYL+S L VL R E K+LK GKLP+SECYYLMG+ DPTGTLK NEVC+IL+NG +SG+V
Sbjct: 590 EPYLQSRLLVLRREEMKALKEGKLPVSECYYLMGSVDPTGTLKPNEVCIILENGHVSGDV 649
Query: 981 LLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYW 802
L+Y+ PGLHFGD+H +TATY+ DL+ VGN+KYAI F TKGPRSLADEMA DFDGDMYW
Sbjct: 650 LVYRQPGLHFGDMHILTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMYW 709
Query: 801 VSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSVI 622
VSRNPQLLKYF S+PW R++ K Q KP + S ELE LF+QFL+NRF+ S I
Sbjct: 710 VSRNPQLLKYFKASKPWVRTAPRI--KVTQLKPTQFSNTELERELFEQFLINRFKPSYTI 767
Query: 621 GTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLKA 442
GTA+D WL +MDRLLTLGDEC +KQ L KML+LV+IYY ALDA KSG+K+E+P++LK
Sbjct: 768 GTASDCWLMYMDRLLTLGDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKP 827
Query: 441 EKFPHFLERQ-----NSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLK 277
++FP+F+E++ Y SKSI GLIY+ V +LPCF+ E+P +CLK
Sbjct: 828 DQFPNFMEKKYLDKDKEYESKSIFGLIYEKVKLSQTKDLSSNEIWQLPCFNLEIPPSCLK 887
Query: 276 KWEHHYEEYRAEMCNAMSI---GDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFD 106
W+ HY EY AEM MS+ ESK+ + +LYGA+EFEES R+L++IF+
Sbjct: 888 SWKEHYTEYLAEMSQVMSMEHESKESKDWMANKVIQKYKLMLYGASEFEESNRELDDIFN 947
Query: 105 EALAIYQICYSYAETNGI-GKCGFAWKVAGRALCSL 1
EALAIY + Y YA++ I G+C FAW VAGRALC L
Sbjct: 948 EALAIYHVTYEYAKSVRIAGRCCFAWNVAGRALCML 983
>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Vitis
vinifera]
Length = 954
Score = 461 bits (1185), Expect = e-127
Identities = 233/391 (59%), Positives = 283/391 (72%), Gaps = 3/391 (0%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+EP+L LS ++ E+K L+ GKLP+++C+YLMGTADPTGTLK +EVC+ILD+GQ+ G
Sbjct: 545 DEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGR 604
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+YKHPGLHFGDIH + ATY+ LE FVGNAKYAIFFP KGPRSLADEMANSDFDGDMY
Sbjct: 605 VLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMY 664
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRN QLL+YF S PW R ST R ++P + S +ELE+ LFQ FL RFQ+SS
Sbjct: 665 WVSRNQQLLQYFRASEPWMRKRST--RHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSA 722
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
IG AAD+WL FMDRLLTL D+C EK+ L+ KML+L +IYY ALDAPKSGMKV + +LK
Sbjct: 723 IGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELK 782
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFS-EEVPAACLKKWE 268
AEKFPHF+ R++SY S SILG IYD V RLP F+ + VP ACL+ W+
Sbjct: 783 AEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWK 842
Query: 267 HHYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALAIY 88
Y++YR+EM A+ G E+K+ ILYGAAEFEES R LE+IFDEALAIY
Sbjct: 843 DRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIY 902
Query: 87 QICYSYAETNG--IGKCGFAWKVAGRALCSL 1
+ Y + NG + C F W+VAGRALC L
Sbjct: 903 HVTYEFV-INGARVSYCNFPWRVAGRALCKL 932
>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Vitis
vinifera] gi|297738765|emb|CBI28010.3| unnamed protein
product [Vitis vinifera]
Length = 929
Score = 461 bits (1185), Expect = e-127
Identities = 233/391 (59%), Positives = 283/391 (72%), Gaps = 3/391 (0%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+EP+L LS ++ E+K L+ GKLP+++C+YLMGTADPTGTLK +EVC+ILD+GQ+ G
Sbjct: 520 DEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGR 579
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+YKHPGLHFGDIH + ATY+ LE FVGNAKYAIFFP KGPRSLADEMANSDFDGDMY
Sbjct: 580 VLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMY 639
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRN QLL+YF S PW R ST R ++P + S +ELE+ LFQ FL RFQ+SS
Sbjct: 640 WVSRNQQLLQYFRASEPWMRKRST--RHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSA 697
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
IG AAD+WL FMDRLLTL D+C EK+ L+ KML+L +IYY ALDAPKSGMKV + +LK
Sbjct: 698 IGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELK 757
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFS-EEVPAACLKKWE 268
AEKFPHF+ R++SY S SILG IYD V RLP F+ + VP ACL+ W+
Sbjct: 758 AEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWK 817
Query: 267 HHYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALAIY 88
Y++YR+EM A+ G E+K+ ILYGAAEFEES R LE+IFDEALAIY
Sbjct: 818 DRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIY 877
Query: 87 QICYSYAETNG--IGKCGFAWKVAGRALCSL 1
+ Y + NG + C F W+VAGRALC L
Sbjct: 878 HVTYEFV-INGARVSYCNFPWRVAGRALCKL 907
>ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
[Nelumbo nucifera]
Length = 1045
Score = 447 bits (1151), Expect = e-123
Identities = 235/445 (52%), Positives = 282/445 (63%), Gaps = 57/445 (12%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVIL-------- 1009
EEPYL++ LSVLMR E+K LK GK+P+SECYYLMGTADPTG L NE+CVIL
Sbjct: 581 EEPYLQTRLSVLMREERKGLKAGKIPMSECYYLMGTADPTGMLGMNEICVILLDHVSTDV 640
Query: 1008 ---------DNGQISGNVLLYKH------------------------------------- 967
S + +LY+H
Sbjct: 641 YVQRSLEKTSLPDFSTSHVLYQHTPHSYVNLWRGSCISTGSPLNYISSSDSGQISGKVLV 700
Query: 966 ---PGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVS 796
PGLHFGDIH +TATY+ +LE VGNAKYAIFFP KGPRSLADEMANSDFDGD+YWVS
Sbjct: 701 YKNPGLHFGDIHVLTATYVKELESIVGNAKYAIFFPIKGPRSLADEMANSDFDGDLYWVS 760
Query: 795 RNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSVIGT 616
RNPQLL YF S+PW+++ S + RKP + S ELEN LF FL +F+ S +G
Sbjct: 761 RNPQLLDYFRPSKPWKQTYSK--KAPCHRKPIDFSAEELENQLFHLFLTTKFEPSKALGI 818
Query: 615 AADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLKAEK 436
AADSWL FMDRLLTLGDEC EK+ L+ KMLQLV+ YY ALDAPK+G+KVE+P L+AEK
Sbjct: 819 AADSWLAFMDRLLTLGDECSSEKECLKKKMLQLVDTYYDALDAPKNGIKVEVPKCLQAEK 878
Query: 435 FPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEHHYE 256
FPHF+ER N Y S S+LGLIYD V +L CF EV AC++KW+ HY
Sbjct: 879 FPHFMERMNKYNSTSVLGLIYDEVNSFQKANLSSTEVWKLFCFDGEVAEACMEKWQMHYN 938
Query: 255 EYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALAIYQICY 76
EYR EM +AM + E+KN +LYGAA FE+S+R +EIF+++LAIY +CY
Sbjct: 939 EYRDEMKSAMELDGEAKNASANEVIQKYKQLLYGAANFEQSSRTRQEIFEDSLAIYHVCY 998
Query: 75 SYAETNGIGKCGFAWKVAGRALCSL 1
YA T G+ KC FAWKVAG ALC L
Sbjct: 999 DYARTKGVEKCSFAWKVAGEALCML 1023
>ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Nelumbo nucifera]
Length = 1022
Score = 431 bits (1109), Expect = e-118
Identities = 226/423 (53%), Positives = 277/423 (65%), Gaps = 35/423 (8%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLP------ISECYYLMGTADPTGTLKDNEVCVIL-- 1009
EEPYL++ LSVLMR E+K LK GK+P +S Y+ + + T +L D +L
Sbjct: 581 EEPYLQTRLSVLMREERKGLKAGKIPMIRLDHVSTDVYVQRSLEKT-SLPDFSTSHVLYQ 639
Query: 1008 ---------------------------DNGQISGNVLLYKHPGLHFGDIHCVTATYLNDL 910
D+GQISG VL+YK+PGLHFGDIH +TATY+ +L
Sbjct: 640 HTPHSYVNLWRGSCISTGSPLNYISSSDSGQISGKVLVYKNPGLHFGDIHVLTATYVKEL 699
Query: 909 ECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLKYFTQSRPWERSSSTS 730
E VGNAKYAIFFP KGPRSLADEMANSDFDGD+YWVSRNPQLL YF S+PW+++ S
Sbjct: 700 ESIVGNAKYAIFFPIKGPRSLADEMANSDFDGDLYWVSRNPQLLDYFRPSKPWKQTYSK- 758
Query: 729 LRKSNQRKPAELSENELENVLFQQFLLNRFQSSSVIGTAADSWLTFMDRLLTLGDECDVE 550
+ RKP + S ELEN LF FL +F+ S +G AADSWL FMDRLLTLGDEC E
Sbjct: 759 -KAPCHRKPIDFSAEELENQLFHLFLTTKFEPSKALGIAADSWLAFMDRLLTLGDECSSE 817
Query: 549 KQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLKAEKFPHFLERQNSYVSKSILGLIYD 370
K+ L+ KMLQLV+ YY ALDAPK+G+KVE+P L+AEKFPHF+ER N Y S S+LGLIYD
Sbjct: 818 KECLKKKMLQLVDTYYDALDAPKNGIKVEVPKCLQAEKFPHFMERMNKYNSTSVLGLIYD 877
Query: 369 TVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEHHYEEYRAEMCNAMSIGDESKNIVTX 190
V +L CF EV AC++KW+ HY EYR EM +AM + E+KN
Sbjct: 878 EVNSFQKANLSSTEVWKLFCFDGEVAEACMEKWQMHYNEYRDEMKSAMELDGEAKNASAN 937
Query: 189 XXXXXXXXILYGAAEFEESTRKLEEIFDEALAIYQICYSYAETNGIGKCGFAWKVAGRAL 10
+LYGAA FE+S+R +EIF+++LAIY +CY YA T G+ KC FAWKVAG AL
Sbjct: 938 EVIQKYKQLLYGAANFEQSSRTRQEIFEDSLAIYHVCYDYARTKGVEKCSFAWKVAGEAL 997
Query: 9 CSL 1
C L
Sbjct: 998 CML 1000
>ref|XP_011626804.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Amborella
trichopoda]
Length = 974
Score = 428 bits (1100), Expect = e-117
Identities = 228/389 (58%), Positives = 266/389 (68%), Gaps = 1/389 (0%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
EEPYL+ LS+LM+ E+K LK GK+ + YYLMGTADPTG LK NEVC+ILD+GQISG
Sbjct: 568 EEPYLQHRLSILMKEERKGLKEGKVLLPNSYYLMGTADPTGKLKGNEVCIILDHGQISGK 627
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y+HPGLHFGDIH TATY+ DL VGNAK+AIFF T+GPRS ADE+AN DFDGDMY
Sbjct: 628 VLVYRHPGLHFGDIHVFTATYIEDLVEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMY 687
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
W+S NP+LL YF PWERSSS + QRKP E S +ELE LF FL +RF S
Sbjct: 688 WISTNPELLHYFKAGPPWERSSSE--KPPPQRKPIEYSPDELETELFDLFLESRFHPSIA 745
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
AADSWL +MDRLLTLGDEC EK L KML+L ++YY A+DAPKSG KVE+P DLK
Sbjct: 746 KCAAADSWLVYMDRLLTLGDECAEEKGCLHQKMLKLADLYYEAVDAPKSGKKVEVPKDLK 805
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEH 265
E++PHF+ER Y S SILG IYD V LPCF EEV + ++KW+
Sbjct: 806 PERYPHFMERTYQYTSTSILGQIYDLVASAQMDVPCEDIEL-LPCFLEEVEPSGMEKWKG 864
Query: 264 HYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALAIYQ 85
Y +YR EM A+S D+ K+ ILYGA E+EE TR EEIF EA IY
Sbjct: 865 LYAQYRDEMNKALSSTDQKKS-NADEVIQNYKKILYGAQEYEERTRPREEIFREACEIYA 923
Query: 84 ICYSYA-ETNGIGKCGFAWKVAGRALCSL 1
I Y YA E + I KCGFAWKVAG ALC L
Sbjct: 924 ISYFYAKEKSDIAKCGFAWKVAGCALCEL 952
>gb|ERN15132.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 428 bits (1100), Expect = e-117
Identities = 228/389 (58%), Positives = 266/389 (68%), Gaps = 1/389 (0%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
EEPYL+ LS+LM+ E+K LK GK+ + YYLMGTADPTG LK NEVC+ILD+GQISG
Sbjct: 582 EEPYLQHRLSILMKEERKGLKEGKVLLPNSYYLMGTADPTGKLKGNEVCIILDHGQISGK 641
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y+HPGLHFGDIH TATY+ DL VGNAK+AIFF T+GPRS ADE+AN DFDGDMY
Sbjct: 642 VLVYRHPGLHFGDIHVFTATYIEDLVEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMY 701
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
W+S NP+LL YF PWERSSS + QRKP E S +ELE LF FL +RF S
Sbjct: 702 WISTNPELLHYFKAGPPWERSSSE--KPPPQRKPIEYSPDELETELFDLFLESRFHPSIA 759
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
AADSWL +MDRLLTLGDEC EK L KML+L ++YY A+DAPKSG KVE+P DLK
Sbjct: 760 KCAAADSWLVYMDRLLTLGDECAEEKGCLHQKMLKLADLYYEAVDAPKSGKKVEVPKDLK 819
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEH 265
E++PHF+ER Y S SILG IYD V LPCF EEV + ++KW+
Sbjct: 820 PERYPHFMERTYQYTSTSILGQIYDLVASAQMDVPCEDIEL-LPCFLEEVEPSGMEKWKG 878
Query: 264 HYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALAIYQ 85
Y +YR EM A+S D+ K+ ILYGA E+EE TR EEIF EA IY
Sbjct: 879 LYAQYRDEMNKALSSTDQKKS-NADEVIQNYKKILYGAQEYEERTRPREEIFREACEIYA 937
Query: 84 ICYSYA-ETNGIGKCGFAWKVAGRALCSL 1
I Y YA E + I KCGFAWKVAG ALC L
Sbjct: 938 ISYFYAKEKSDIAKCGFAWKVAGCALCEL 966
>ref|XP_009352548.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Pyrus x
bretschneideri]
Length = 1088
Score = 423 bits (1087), Expect = e-115
Identities = 211/389 (54%), Positives = 269/389 (69%), Gaps = 1/389 (0%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+E YL+ LS+L++ E K L+ GKL + +CYYLMGTADPTG L+ +EVC+ILD+GQ+SG
Sbjct: 681 DESYLQYRLSILIKEEMKGLRRGKLYVPDCYYLMGTADPTGILEKDEVCIILDSGQVSGK 740
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y++PGLHFGDIH + ATY+ +LE VGNAKYAIFF KGPRS+ADE++ DFDGD+Y
Sbjct: 741 VLVYRNPGLHFGDIHVLKATYVKELEYVVGNAKYAIFFSRKGPRSVADEISGGDFDGDLY 800
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVS+NPQLL YF S PW +SS K+ KPA+LS+ +LE L FL RF+ S
Sbjct: 801 WVSKNPQLLGYFKPSEPWVPASSAP--KAASVKPAKLSKEDLEEQLINLFLTTRFKPSYA 858
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMKVELPNDLK 445
+ AADSWL MDR LT GD +++ ++ +L+LV+IYY ALDAPK G KVE+P DLK
Sbjct: 859 MSEAADSWLAMMDRYLTRGDS-SIDENLVKANILRLVDIYYDALDAPKKGGKVEVPKDLK 917
Query: 444 AEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKKWEH 265
KFPH++E++NSY S SILG IYDTV +LP F EVP CL KW
Sbjct: 918 VSKFPHYMEKKNSYPSTSILGSIYDTVNEYQPDDLSTREVKKLPIFDVEVPEECLIKWRE 977
Query: 264 HYEEYRAEMCNAMSIGD-ESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALAIY 88
Y++YR +M +A+ GD E KN ILYG +F++STR + EIFDEA+AIY
Sbjct: 978 QYKQYRCDMTSALRDGDQEGKNQAAGELITKYREILYGGDDFDKSTRPMGEIFDEAIAIY 1037
Query: 87 QICYSYAETNGIGKCGFAWKVAGRALCSL 1
+CY YA + G+ KCGFAWKVAG AL L
Sbjct: 1038 NVCYDYARSAGVSKCGFAWKVAGSALFKL 1066
>ref|XP_010095361.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
gi|587870497|gb|EXB59780.1| putative RNA-dependent RNA
polymerase 3 [Morus notabilis]
Length = 521
Score = 422 bits (1086), Expect = e-115
Identities = 211/408 (51%), Positives = 272/408 (66%), Gaps = 20/408 (4%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
EEPYL+ L VL++ E+KSL+GG+L + +C+YLMGTADPTG L+ +EVC++L NGQ+SG
Sbjct: 94 EEPYLQHRLFVLVKEERKSLRGGRLHVDDCFYLMGTADPTGKLEHDEVCIVLANGQVSGK 153
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y++PGLHFGDIH + ATY+ ++E FVGNAKYAIFF KGPRS+ADEMA DFDGDM+
Sbjct: 154 VLVYRNPGLHFGDIHVLKATYIEEMESFVGNAKYAIFFSKKGPRSIADEMAGGDFDGDMF 213
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRNP+LLKYF S PW + SST KS Q P +LS+ ELE+ L + FL RF+ S
Sbjct: 214 WVSRNPELLKYFKPSDPWIKKSSTGKVKSKQ--PIDLSDRELEDELIKLFLTVRFKPSFA 271
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPKSGMK-------- 469
A++ WL MDR LTLGD+C EK ++ + +LV+IYY ALDAPK G K
Sbjct: 272 KSEASEGWLALMDRFLTLGDDCVAEKNAVKDNLFELVDIYYDALDAPKQGGKQQDLAKFF 331
Query: 468 -----------VELPNDLKAEKFPHFLERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXS 322
VE+P +LK +FPH++E+QNS+ S+SILG IYD V
Sbjct: 332 EAYAALELSFQVEVPRELKPNRFPHYMEKQNSFHSRSILGWIYDEVDAYQLEDHSNKEIF 391
Query: 321 RLPCFSEEVPAACLKKWEHHYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEF 142
+LP F EVP ACL KW+ HY++YR +MC+A+ D K +LYGA E
Sbjct: 392 KLPHFEVEVPEACLTKWKAHYKDYRDDMCDALLAKDVGKTEAAEEVKRKYKRLLYGAEEL 451
Query: 141 EESTRKLEEIFDEALAIYQICYSYA-ETNGIGKCGFAWKVAGRALCSL 1
EEST+K+EEI++EALAIY +CY YA + C FAW +AG AL L
Sbjct: 452 EESTKKMEEIYNEALAIYHVCYDYAISQRKVSYCSFAWNIAGSALLKL 499
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 422 bits (1086), Expect = e-115
Identities = 220/392 (56%), Positives = 276/392 (70%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
EEPYL+ LS+LM+ E+KSLKGGK+P+ E YYLMGTADPTG L+ +EVC+ILD GQISG
Sbjct: 467 EEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGE 526
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y++PGLHFGDIH + ATY+ +LE FVGNAKYAIFFP KGPRSLADEM+ DFDGDM+
Sbjct: 527 VLIYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMF 586
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
+VSRNPQLL+ F Q+ PW + STS RKP+E S+ ELE LF+ FL NRFQ SS
Sbjct: 587 FVSRNPQLLETFKQTEPW--TPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSST 644
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAP-KSGMKVELPNDL 448
+G AADSWL MDRLLTLG++C E ++ + L++IYY ALDAP K G ++E+P L
Sbjct: 645 VGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGL 704
Query: 447 KAEKFPHFL--ERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKK 274
KAE FPHF+ + +Y S SILG IYD V +LPCF +EV L K
Sbjct: 705 KAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDDEVHELYLVK 764
Query: 273 WEHHYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
W+ Y +YR EM NA+ G+ES N LY AAEF S R+ EEIF+EA+A
Sbjct: 765 WKELYGQYRKEMRNALKAGEES-NDKANEVIRKYKEFLYEAAEFNLSKRRDEEIFEEAMA 823
Query: 93 IYQICYSYAETNG-IGKCGFAWKVAGRALCSL 1
+YQ+ Y++A++ G +G C FAW+VAG ALC+L
Sbjct: 824 LYQVSYNHAKSQGVVGNCSFAWRVAGLALCTL 855
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 422 bits (1086), Expect = e-115
Identities = 220/392 (56%), Positives = 276/392 (70%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
EEPYL+ LS+LM+ E+KSLKGGK+P+ E YYLMGTADPTG L+ +EVC+ILD GQISG
Sbjct: 489 EEPYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGE 548
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y++PGLHFGDIH + ATY+ +LE FVGNAKYAIFFP KGPRSLADEM+ DFDGDM+
Sbjct: 549 VLIYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMF 608
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
+VSRNPQLL+ F Q+ PW + STS RKP+E S+ ELE LF+ FL NRFQ SS
Sbjct: 609 FVSRNPQLLETFKQTEPW--TPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSST 666
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAP-KSGMKVELPNDL 448
+G AADSWL MDRLLTLG++C E ++ + L++IYY ALDAP K G ++E+P L
Sbjct: 667 VGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGL 726
Query: 447 KAEKFPHFL--ERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKK 274
KAE FPHF+ + +Y S SILG IYD V +LPCF +EV L K
Sbjct: 727 KAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDDEVHELYLVK 786
Query: 273 WEHHYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
W+ Y +YR EM NA+ G+ES N LY AAEF S R+ EEIF+EA+A
Sbjct: 787 WKELYGQYRKEMRNALKAGEES-NDKANEVIRKYKEFLYEAAEFNLSKRRDEEIFEEAMA 845
Query: 93 IYQICYSYAETNG-IGKCGFAWKVAGRALCSL 1
+YQ+ Y++A++ G +G C FAW+VAG ALC+L
Sbjct: 846 LYQVSYNHAKSQGVVGNCSFAWRVAGLALCTL 877
>ref|XP_010049630.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4
[Eucalyptus grandis]
Length = 904
Score = 421 bits (1082), Expect = e-115
Identities = 217/392 (55%), Positives = 270/392 (68%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+E YL++ LS LM E+KSLKGG++PI + YYLMGTADPTG LK +EVC+ILD+GQISG
Sbjct: 493 DETYLQNRLSSLMNDEKKSLKGGRIPIPDSYYLMGTADPTGILKSDEVCIILDSGQISGK 552
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y++PGLHFGDIH + ATY+ LE VGN+KYAIFFPT GPRSLADE+A DFDGDMY
Sbjct: 553 VLVYRYPGLHFGDIHLLNATYVEALETKVGNSKYAIFFPTSGPRSLADEIAGGDFDGDMY 612
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRNPQLLKYFT S+PW S+++ + N +KP +LS ELE+ L +L RF S
Sbjct: 613 WVSRNPQLLKYFTPSQPW--VSASAAQDMNCKKPIDLSFEELEDELIDLWLNTRFNPSYT 670
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPK-SGMKVELPNDL 448
+G AADSW MDR LTLG + EK +E + QL++IYY A+DAPK SG+K+E+P L
Sbjct: 671 VGVAADSWQALMDRFLTLGSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSL 730
Query: 447 KAEKFPHFL--ERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKK 274
KAE FPH++ ++ S+ S SILG+I+D V +LP F E P C +
Sbjct: 731 KAETFPHYMGKDKSMSFHSNSILGVIFDKVESYQADIPTGKGIWKLPYFDVETPRDCRME 790
Query: 273 WEHHYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
WE Y EYR+EM A+ G E KN +LYGA EFEES RK E+IF+EALA
Sbjct: 791 WERRYTEYRSEMVAALGEGAEGKNSSADNVINKYKQLLYGAPEFEESLRKEEDIFNEALA 850
Query: 93 IYQICYSYA-ETNGIGKCGFAWKVAGRALCSL 1
IY I Y YA N + KCGFAW+VAG ALC +
Sbjct: 851 IYNITYDYAMRWNDVSKCGFAWRVAGPALCRI 882
>ref|XP_010049629.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
[Eucalyptus grandis]
Length = 980
Score = 421 bits (1082), Expect = e-115
Identities = 217/392 (55%), Positives = 270/392 (68%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+E YL++ LS LM E+KSLKGG++PI + YYLMGTADPTG LK +EVC+ILD+GQISG
Sbjct: 569 DETYLQNRLSSLMNDEKKSLKGGRIPIPDSYYLMGTADPTGILKSDEVCIILDSGQISGK 628
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y++PGLHFGDIH + ATY+ LE VGN+KYAIFFPT GPRSLADE+A DFDGDMY
Sbjct: 629 VLVYRYPGLHFGDIHLLNATYVEALETKVGNSKYAIFFPTSGPRSLADEIAGGDFDGDMY 688
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRNPQLLKYFT S+PW S+++ + N +KP +LS ELE+ L +L RF S
Sbjct: 689 WVSRNPQLLKYFTPSQPW--VSASAAQDMNCKKPIDLSFEELEDELIDLWLNTRFNPSYT 746
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPK-SGMKVELPNDL 448
+G AADSW MDR LTLG + EK +E + QL++IYY A+DAPK SG+K+E+P L
Sbjct: 747 VGVAADSWQALMDRFLTLGSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSL 806
Query: 447 KAEKFPHFL--ERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKK 274
KAE FPH++ ++ S+ S SILG+I+D V +LP F E P C +
Sbjct: 807 KAETFPHYMGKDKSMSFHSNSILGVIFDKVESYQADIPTGKGIWKLPYFDVETPRDCRME 866
Query: 273 WEHHYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
WE Y EYR+EM A+ G E KN +LYGA EFEES RK E+IF+EALA
Sbjct: 867 WERRYTEYRSEMVAALGEGAEGKNSSADNVINKYKQLLYGAPEFEESLRKEEDIFNEALA 926
Query: 93 IYQICYSYA-ETNGIGKCGFAWKVAGRALCSL 1
IY I Y YA N + KCGFAW+VAG ALC +
Sbjct: 927 IYNITYDYAMRWNDVSKCGFAWRVAGPALCRI 958
>ref|XP_010049628.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Eucalyptus grandis]
Length = 992
Score = 421 bits (1082), Expect = e-115
Identities = 217/392 (55%), Positives = 270/392 (68%), Gaps = 4/392 (1%)
Frame = -2
Query: 1164 EEPYLRSYLSVLMRVEQKSLKGGKLPISECYYLMGTADPTGTLKDNEVCVILDNGQISGN 985
+E YL++ LS LM E+KSLKGG++PI + YYLMGTADPTG LK +EVC+ILD+GQISG
Sbjct: 581 DETYLQNRLSSLMNDEKKSLKGGRIPIPDSYYLMGTADPTGILKSDEVCIILDSGQISGK 640
Query: 984 VLLYKHPGLHFGDIHCVTATYLNDLECFVGNAKYAIFFPTKGPRSLADEMANSDFDGDMY 805
VL+Y++PGLHFGDIH + ATY+ LE VGN+KYAIFFPT GPRSLADE+A DFDGDMY
Sbjct: 641 VLVYRYPGLHFGDIHLLNATYVEALETKVGNSKYAIFFPTSGPRSLADEIAGGDFDGDMY 700
Query: 804 WVSRNPQLLKYFTQSRPWERSSSTSLRKSNQRKPAELSENELENVLFQQFLLNRFQSSSV 625
WVSRNPQLLKYFT S+PW S+++ + N +KP +LS ELE+ L +L RF S
Sbjct: 701 WVSRNPQLLKYFTPSQPW--VSASAAQDMNCKKPIDLSFEELEDELIDLWLNTRFNPSYT 758
Query: 624 IGTAADSWLTFMDRLLTLGDECDVEKQTLEGKMLQLVNIYYAALDAPK-SGMKVELPNDL 448
+G AADSW MDR LTLG + EK +E + QL++IYY A+DAPK SG+K+E+P L
Sbjct: 759 VGVAADSWQALMDRFLTLGSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSL 818
Query: 447 KAEKFPHFL--ERQNSYVSKSILGLIYDTVXXXXXXXXXXXXXSRLPCFSEEVPAACLKK 274
KAE FPH++ ++ S+ S SILG+I+D V +LP F E P C +
Sbjct: 819 KAETFPHYMGKDKSMSFHSNSILGVIFDKVESYQADIPTGKGIWKLPYFDVETPRDCRME 878
Query: 273 WEHHYEEYRAEMCNAMSIGDESKNIVTXXXXXXXXXILYGAAEFEESTRKLEEIFDEALA 94
WE Y EYR+EM A+ G E KN +LYGA EFEES RK E+IF+EALA
Sbjct: 879 WERRYTEYRSEMVAALGEGAEGKNSSADNVINKYKQLLYGAPEFEESLRKEEDIFNEALA 938
Query: 93 IYQICYSYA-ETNGIGKCGFAWKVAGRALCSL 1
IY I Y YA N + KCGFAW+VAG ALC +
Sbjct: 939 IYNITYDYAMRWNDVSKCGFAWRVAGPALCRI 970